View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21581_high_12 (Length: 354)

Name: NF21581_high_12
Description: NF21581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21581_high_12
NF21581_high_12
[»] chr7 (5 HSPs)
chr7 (1-343)||(4008303-4008645)
chr7 (1-343)||(4013695-4014037)
chr7 (31-137)||(15902830-15902936)
chr7 (31-137)||(24339650-24339756)
chr7 (89-137)||(5409787-5409835)
[»] scaffold0376 (1 HSPs)
scaffold0376 (31-115)||(6320-6404)
[»] chr5 (2 HSPs)
chr5 (31-137)||(32766888-32766994)
chr5 (9-136)||(30098312-30098439)
[»] chr1 (4 HSPs)
chr1 (30-130)||(6612123-6612223)
chr1 (31-137)||(9828052-9828158)
chr1 (89-149)||(1486648-1486708)
chr1 (31-112)||(9629870-9629951)
[»] chr8 (4 HSPs)
chr8 (15-107)||(4122224-4122316)
chr8 (89-137)||(22197687-22197735)
chr8 (81-133)||(12570458-12570510)
chr8 (81-133)||(12570684-12570736)
[»] chr3 (2 HSPs)
chr3 (31-130)||(8039787-8039886)
chr3 (31-149)||(17005552-17005670)
[»] chr6 (3 HSPs)
chr6 (31-149)||(10294115-10294233)
chr6 (3-149)||(25038004-25038150)
chr6 (30-78)||(32320673-32320721)
[»] chr2 (1 HSPs)
chr2 (31-149)||(18420367-18420485)
[»] scaffold0053 (1 HSPs)
scaffold0053 (89-137)||(8853-8901)
[»] scaffold0044 (1 HSPs)
scaffold0044 (32-112)||(53189-53269)
[»] chr4 (2 HSPs)
chr4 (89-137)||(3947717-3947765)
chr4 (89-137)||(23292942-23292990)


Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 343
Target Start/End: Complemental strand, 4008645 - 4008303
Alignment:
Q  1 atgacacagacactgatacgtcgatatctttaataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatga 100  Q
    |||||||||| ||||| |||  || | ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |     
T  4008645 atgacacagaaactgacacgcagacacctttaataatttgataaaattacatgattcaatgtaattgtatgtgtcggtattgtatcgatgtccgacacgg 4008546  T
Q  101 cacgtgtccgacgccaggatacgcctaatctgaggagagtatgtgcttctgtgtggcagtttattgagcttgttgtgcagcagtttgacaacgtacaaga 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4008545 cacgtgtccgacgccaggatacacctaatctgaggagagtatgtgcttctgtgtggcagattattgagcttgttgtgcagcagtttgacaacgtacaaga 4008446  T
Q  201 cggagttgtctttcatatttttcaacattccactgcacatcaagctaaacagattgctactttaatgtggagcatatggaaaaaggcgcaaacgcgaatc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4008445 cggagttgtctttcatatttttcaacattccactgcacatcaagctgaacagattgctactttaatgtggagcatatggaaaaaggcgcaaacgcgaatc 4008346  T
Q  301 gcaaacaacagttagttgtcacgggacaaacatatgggtctgt 343  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  4008345 gcaaacaacagttagttgtcatgggacaaacatatgggtctgt 4008303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 343
Target Start/End: Complemental strand, 4014037 - 4013695
Alignment:
Q  1 atgacacagacactgatacgtcgatatctttaataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatga 100  Q
    |||||||||| ||||| |||  || | ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |     
T  4014037 atgacacagaaactgacacgcagacacctttaataatttgataaaattacatgattcaatgtaattgtatgtgtcggtattgtatcgatgtccgacacgg 4013938  T
Q  101 cacgtgtccgacgccaggatacgcctaatctgaggagagtatgtgcttctgtgtggcagtttattgagcttgttgtgcagcagtttgacaacgtacaaga 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4013937 cacgtgtccgacgccaggatacacctaatctgaggagagtatgtgcttctgtgtggcagattattgagcttgttgtgcagcagtttgacaacgtacaaga 4013838  T
Q  201 cggagttgtctttcatatttttcaacattccactgcacatcaagctaaacagattgctactttaatgtggagcatatggaaaaaggcgcaaacgcgaatc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4013837 cggagttgtctttcatatttttcaacattccactgcacatcaagctgaacagattgctactttaatgtggagcatatggaaaaaggcgcaaacgcgaatc 4013738  T
Q  301 gcaaacaacagttagttgtcacgggacaaacatatgggtctgt 343  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  4013737 gcaaacaacagttagttgtcatgggacaaacatatgggtctgt 4013695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 15902830 - 15902936
Alignment:
Q  31 taataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaatc 130  Q
    |||||||||||||||||  ||| ||| | ||| ||| ||||||||||| |||| ||| | ||||||| ||||| || ||||  |||||| |||| ||||     
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacacatgcccgagaccaggacacgcttaatt 15902929  T
Q  131 tgaggag 137  Q
    |||||||    
T  15902930 tgaggag 15902936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 24339650 - 24339756
Alignment:
Q  31 taataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaatc 130  Q
    ||||||||||| |||||  ||| ||||| ||| |||  | |||||||| | || ||| ||||||||| ||||||| |||||| || ||| ||||||||||    
T  24339650 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatc 24339749  T
Q  131 tgaggag 137  Q
     ||||||    
T  24339750 cgaggag 24339756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 5409835 - 5409787
Alignment:
Q  89 tgtcggacatgacacgtgtccgacgccaggatacgcctaatctgaggag 137  Q
    ||||||||| |||||||||||||| || ||| |||||||||| ||||||    
T  5409835 tgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggag 5409787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 6320 - 6404
Alignment:
Q  31 taataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgacgcc 115  Q
    ||||||||||| |||||||||| ||||||||| ||| ||||||||||| | |||||| ||| || || |||||| ||||||||||    
T  6320 taataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgtcgtatcggtgtggggcacgacacgggtccgacgcc 6404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 32766994 - 32766888
Alignment:
Q  31 taataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaatc 130  Q
    ||||||||||| ||||| |||  ||||||||| ||| |||||||  || | || ||| ||||| | | |||||||||||||| |||||||||| ||||||    
T  32766994 taataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatc 32766895  T
Q  131 tgaggag 137  Q
    |||||||    
T  32766894 tgaggag 32766888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 30098312 - 30098439
Alignment:
Q  9 gacactgatacgtcgatatctttaataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtc 108  Q
    |||||||| ||| ||| | | |||||||||||| |||||  ||| ||||||||| ||| ||  ||||||||| |  ||  ||||||||| ||||||||||    
T  30098312 gacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtc 30098411  T
Q  109 cgacgccaggatacgcctaatctgagga 136  Q
     ||| |||||| || ||||||| |||||    
T  30098412 agacaccaggacacacctaatccgagga 30098439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 6612223 - 6612123
Alignment:
Q  30 ttaataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaat 129  Q
    |||||||||||| |||||| ||| ||||| ||| |||  | |||||||| | || ||||||||||||| || | ||||||||| |||||| |||||||||    
T  6612223 ttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaat 6612124  T
Q  130 c 130  Q
    |    
T  6612123 c 6612123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 9828052 - 9828158
Alignment:
Q  31 taataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaatc 130  Q
    |||||||||||||||||  ||| ||||| ||| ||| ||||||||||| | || ||  |||| |||| |||||||||||||| || ||| ||| ||||||    
T  9828052 taataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatc 9828151  T
Q  131 tgaggag 137  Q
     ||||||    
T  9828152 cgaggag 9828158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 1486708 - 1486648
Alignment:
Q  89 tgtcggacatgacacgtgtccgacgccaggatacgcctaatctgaggagagtatgtgcttc 149  Q
    ||||||||| |||||||||||||| || ||| |||||||||| |||||| || ||||||||    
T  1486708 tgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttc 1486648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 9629951 - 9629870
Alignment:
Q  31 taataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgac 112  Q
    |||||||||||||||||   || ||||| ||| ||| || |||||||| | || ||||||||||||| ||||| ||||||||    
T  9629951 taataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgac 9629870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 4122316 - 4122224
Alignment:
Q  15 gatacgtcgatatctttaataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgt 107  Q
    |||||||||| ||| ||||||||| |||||||||  || ||||| ||| ||| ||||||||||| |||| || |||||  ||| |||||||||    
T  4122316 gatacgtcgacatcattaataattagataaaattatataattcattgtaattatatgtgtcggtgttgtgtcaatgtcaaacacgacacgtgt 4122224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 22197735 - 22197687
Alignment:
Q  89 tgtcggacatgacacgtgtccgacgccaggat-acgcctaatctgaggag 137  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||||    
T  22197735 tgtcggacatgacacgtgtccgacacc-ggatcacgcctaatctgaggag 22197687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 12570510 - 12570458
Alignment:
Q  81 tgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaatctga 133  Q
    ||||||| |||| ||||  ||||||||||||| |||||| |||||||||||||    
T  12570510 tgtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctga 12570458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 12570736 - 12570684
Alignment:
Q  81 tgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaatctga 133  Q
    ||||||| |||| ||||  ||||||||||||| |||||| |||||||||||||    
T  12570736 tgtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctga 12570684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 8039886 - 8039787
Alignment:
Q  31 taataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaatc 130  Q
    ||||||||||| ||||||  || ||||| ||| ||| ||||||||||| | || ||| |||||||||||| || |||||||| || ||| |||| |||||    
T  8039886 taataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatc 8039787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 17005670 - 17005552
Alignment:
Q  31 taataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaatc 130  Q
    |||||||||||||||||   || ||||| ||| ||| || |||||||| |||| | | |||| ||||| ||||||||| ||| |||||| ||  ||||||    
T  17005670 taataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacctctaatc 17005571  T
Q  131 tgaggagagtatgtgcttc 149  Q
     |||||| || ||||||||    
T  17005570 cgaggagtgtttgtgcttc 17005552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 10294115 - 10294233
Alignment:
Q  31 taataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaatc 130  Q
    ||||||||||| | ||| ||||  |||||||| ||| ||||||||||| | || | | ||||||||| |||| ||||||||  | |||| ||  ||||||    
T  10294115 taataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatc 10294214  T
Q  131 tgaggagagtatgtgcttc 149  Q
    ||||||| || ||||||||    
T  10294215 tgaggagtgtctgtgcttc 10294233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 25038150 - 25038004
Alignment:
Q  3 gacacagacactgatacgtcgatatctttaataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgaca 102  Q
    |||||||| ||||| |||| || | | |||||||||||| |||||| ||| ||| | ||| |||  |  |||||||||||| | | |||| |||| ||||    
T  25038150 gacacagatactgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgaca 25038051  T
Q  103 cgtgtccgacgccaggatacgcctaatctgaggagagtatgtgcttc 149  Q
    |||||||||| |||| | |||| | | ||||| || |||||||||||    
T  25038050 cgtgtccgacaccagaacacgcatgacctgagaagtgtatgtgcttc 25038004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 32320721 - 32320673
Alignment:
Q  30 ttaataatttgataaaattgcatgattcaatgtcattgtatgtgtcggt 78  Q
    ||||||||||||||||||  ||| ||||||||||||| ||||| |||||    
T  32320721 ttaataatttgataaaatcacataattcaatgtcattatatgtatcggt 32320673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 18420485 - 18420367
Alignment:
Q  31 taataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgacgccaggatacgcctaatc 130  Q
    ||||||||||| |||||  ||| ||||||||  ||| || |||||||| |||| || ||||||||||||||| |||| ||||   | || ||||||||||    
T  18420485 taataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatgacaagtgttcgacattatgacacgcctaatc 18420386  T
Q  131 tgaggagagtatgtgcttc 149  Q
     ||| || || ||||||||    
T  18420385 cgagaagtgtctgtgcttc 18420367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 8853 - 8901
Alignment:
Q  89 tgtcggacatgacacgtgtccgacgccaggatacgcctaatctgaggag 137  Q
    ||||||||| |||||||||||||| ||  || |||||||||||||||||    
T  8853 tgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggag 8901  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 53189 - 53269
Alignment:
Q  32 aataatttgataaaattgcatgattcaatgtcattgtatgtgtcggtattgtatcgatgtcggacatgacacgtgtccgac 112  Q
    |||||||||| |||||  ||| ||||| ||| ||| || ||||||||   || ||| ||||||||||||||||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgac 53269  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 3947765 - 3947717
Alignment:
Q  89 tgtcggacatgacacgtgtccgacgccaggatacgcctaatctgaggag 137  Q
    ||||||||| |||||||||||||| |||||| || ||||||| ||||||    
T  3947765 tgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggag 3947717  T

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Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 23292990 - 23292942
Alignment:
Q  89 tgtcggacatgacacgtgtccgacgccaggatacgcctaatctgaggag 137  Q
    ||||||||| |||||||||||||| || ||| |||||||||| ||||||    
T  23292990 tgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggag 23292942  T

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