View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21581_high_2 (Length: 490)

Name: NF21581_high_2
Description: NF21581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21581_high_2
NF21581_high_2
[»] chr8 (7 HSPs)
chr8 (63-476)||(23745876-23746289)
chr8 (41-286)||(21208566-21208811)
chr8 (55-286)||(14887299-14887530)
chr8 (57-146)||(22835377-22835466)
chr8 (41-136)||(18236943-18237038)
chr8 (41-136)||(18246394-18246489)
chr8 (41-177)||(20748585-20748721)
[»] scaffold0163 (1 HSPs)
scaffold0163 (41-476)||(19803-20229)
[»] scaffold0066 (1 HSPs)
scaffold0066 (94-469)||(1799-2175)
[»] chr3 (7 HSPs)
chr3 (41-464)||(40089318-40089732)
chr3 (41-389)||(2159231-2159579)
chr3 (41-286)||(6426807-6427052)
chr3 (41-286)||(8977346-8977591)
chr3 (68-286)||(16406109-16406327)
chr3 (41-223)||(9541699-9541881)
chr3 (55-177)||(28360381-28360503)
[»] chr1 (1 HSPs)
chr1 (41-476)||(20175248-20175674)
[»] chr5 (12 HSPs)
chr5 (23-213)||(21081392-21081582)
chr5 (320-476)||(21081583-21081737)
chr5 (41-286)||(20952361-20952606)
chr5 (41-286)||(27416631-27416876)
chr5 (41-286)||(18384240-18384485)
chr5 (41-286)||(26197921-26198166)
chr5 (41-286)||(33943820-33944065)
chr5 (55-223)||(19381388-19381556)
chr5 (41-177)||(30450278-30450414)
chr5 (41-136)||(24296248-24296343)
chr5 (41-177)||(24416794-24416930)
chr5 (55-103)||(26040415-26040463)
[»] chr2 (7 HSPs)
chr2 (41-286)||(27165576-27165821)
chr2 (55-286)||(45018850-45019081)
chr2 (41-286)||(9509360-9509605)
chr2 (41-286)||(18655718-18655963)
chr2 (55-140)||(22103160-22103245)
chr2 (75-226)||(22906705-22906856)
chr2 (42-142)||(24721287-24721387)
[»] scaffold0313 (2 HSPs)
scaffold0313 (55-286)||(14057-14288)
scaffold0313 (55-185)||(1-131)
[»] chr6 (4 HSPs)
chr6 (41-286)||(24927761-24928006)
chr6 (41-286)||(16902446-16902691)
chr6 (41-286)||(31361319-31361564)
chr6 (68-286)||(18164565-18164783)
[»] scaffold0145 (1 HSPs)
scaffold0145 (41-223)||(33497-33679)
[»] chr4 (5 HSPs)
chr4 (55-223)||(16269619-16269787)
chr4 (41-286)||(6696718-6696963)
chr4 (55-223)||(17155979-17156147)
chr4 (41-177)||(26816455-26816591)
chr4 (41-177)||(54695462-54695598)
[»] scaffold0254 (1 HSPs)
scaffold0254 (41-286)||(13574-13819)
[»] chr7 (11 HSPs)
chr7 (41-286)||(6538977-6539222)
chr7 (41-286)||(8505549-8505794)
chr7 (41-286)||(16137780-16138025)
chr7 (41-286)||(32102880-32103125)
chr7 (41-286)||(46501614-46501859)
chr7 (55-286)||(9540850-9541081)
chr7 (41-286)||(5387511-5387756)
chr7 (41-286)||(26353895-26354140)
chr7 (41-286)||(44901857-44902102)
chr7 (55-223)||(18663448-18663616)
chr7 (41-177)||(15179700-15179836)
[»] scaffold0611 (1 HSPs)
scaffold0611 (55-223)||(2509-2677)
[»] scaffold0141 (1 HSPs)
scaffold0141 (55-188)||(30481-30614)
[»] scaffold0049 (1 HSPs)
scaffold0049 (55-188)||(84198-84331)
[»] scaffold0764 (1 HSPs)
scaffold0764 (55-183)||(6489-6617)
[»] scaffold0059 (1 HSPs)
scaffold0059 (41-145)||(46020-46124)
[»] scaffold0003 (1 HSPs)
scaffold0003 (75-223)||(153135-153283)
[»] scaffold0572 (1 HSPs)
scaffold0572 (41-152)||(13-124)
[»] scaffold0142 (1 HSPs)
scaffold0142 (55-146)||(32516-32607)
[»] scaffold0028 (1 HSPs)
scaffold0028 (41-177)||(99976-100112)
[»] scaffold0010 (2 HSPs)
scaffold0010 (41-136)||(261085-261180)
scaffold0010 (41-136)||(263388-263483)
[»] scaffold0233 (1 HSPs)
scaffold0233 (41-177)||(6858-6994)


Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 63 - 476
Target Start/End: Original strand, 23745876 - 23746289
Alignment:
Q  63 actaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgaggttcaggca 162  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| ||| || |||||||||||| |    
T  23745876 actaatctttccttgtttctgacaaccttaccattttcatctagtatatctctgaacacccatcttgttccaatgatggtttcgtcttgaggttcaggta 23745975  T
Q  163 ccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattgcttcattaatggattttggctc 262  Q
    || ||||||| ||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||    
T  23745976 ccgaattccagactttgtttctctcaaattgagaaagctcttaagtcatggcttcaatccatgattgattagtgataacttcatttatggattttggctc 23746075  T
Q  263 tattagagaaatcattgtcatgtttgtcttgtcttgagatgatgatgttgttctcactttgtcagcactgtcaccaatgattaactctttaggatgatca 362  Q
    |||| ||||||||||   ||||||||  |||| |||  |||||||| ||||||| ||||| ||||||  ||||| |||||||||||||||||||||||||    
T  23746076 tatttgagaaatcataaccatgtttgatttgtgttgttatgatgatcttgttcttactttatcagcagagtcacaaatgattaactctttaggatgatca 23746175  T
Q  363 gcaactgattttcagttcggaggaatggatagagaagatgaatctggtttgtcttcatccttttgttttgatatatcagaagtttgttgatgaatagaat 462  Q
     |||||||||| ||| | ||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23746176 acaactgatttccagcttggacgaatggatagagaagatgaatttggttcgtcttcatccttttgttttgatatatcagaagtttgttgatgactagaat 23746275  T
Q  463 gatgatgtccatct 476  Q
     ||||||| |||||    
T  23746276 aatgatgttcatct 23746289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Original strand, 21208566 - 21208811
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  21208566 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 21208665  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  21208666 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 21208765  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  21208766 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 21208811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 286
Target Start/End: Original strand, 14887299 - 14887530
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||||||||| ||||| ||||||||||||||||||||   || ||| || || ||||| |||||||||||||||||||||||| |||||| ||||      
T  14887299 cttgagcaactaaccttgctttgtttctgacaaccttacctcctttatcaagcttgtttctaaacacccatcttgttccaatgatgcttttgtcttgatt 14887398  T
Q  155 ttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattgcttcattaatggat 254  Q
     |  || || || ||||||||||||||||||||| | | |||||| || ||  ||||||| |||||||| || | ||||   || |||||||| || ||     
T  14887399 atttggaactaagttccaaactttgtttctttcaaactgagaaagttcctccttcatggcctcaatccaagagtcatcaagaatggcttcattgattgac 14887498  T
Q  255 tttggctctattagagaaatcattgtcatgtt 286  Q
    || || || ||| |||||||||||| ||||||    
T  14887499 ttgggttccatttgagaaatcattgccatgtt 14887530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 146
Target Start/End: Complemental strand, 22835466 - 22835377
Alignment:
Q  57 tgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttg 146  Q
    ||||||||||| ||||| |||||||||||||||||||| | |||||| || ||||||||||| ||| ||||||| ||||||||| |||||    
T  22835466 tgagcaactaaccttgcattgtttctgacaaccttaccttcttcatcaagcttatttctgaaaacctatcttgtaccaatgatggttttg 22835377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 18237038 - 18236943
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaat 136  Q
    ||||||||| ||  |||| ||||||||||| || || ||||||| ||| || || | |||||| ||||||||||| || |||||||||||||||||    
T  18237038 ttgttgattgtagccttgtgcaactaatctggctttatttctgataacttttccttcttcatctagtttatttctaaaaacccatcttgttccaat 18236943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 18246489 - 18246394
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaat 136  Q
    ||||||||| ||  |||| ||||||||||| || || ||||||| ||| || || | |||||| ||||||||||| || |||||||||||||||||    
T  18246489 ttgttgattgtagccttgtgcaactaatctggctttatttctgataacttttccttcttcatctagtttatttctaaaaacccatcttgttccaat 18246394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 20748721 - 20748585
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||  ||||||| || ||||| || |||||||| | ||| || || | |||||  ||||||||||| || || ||||||||||||||||||    
T  20748721 ttgttgattgtacccttgagctaccaatctagctttgtttcttataacttttccttcttcatttagtttatttctaaatactcatcttgttccaatgatg 20748622  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactt 177  Q
      ||  |||||||||| ||| || | |||||| ||||    
T  20748621 gattgattttgaggtttaggaacaagattccatactt 20748585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 41 - 476
Target Start/End: Complemental strand, 20229 - 19803
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||| || ||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  20229 ttgttgattataaccttgagcaactagtcttgctttgtttctgaccactttaccatcttcatctagtttatttctgaacacccatcttgttccaatgatg 20130  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||||| | |||||||||| || |||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||| |||| |    
T  20129 gttttgtctcgaggttcaggtactaaattccagactttgtttctttcaaactgagaaagctcttcagtcatggcttcaatccatgattgatcaatgatag 20030  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtttgtcttgtcttgagatgatgatgttgttctcactttgtcagcactgtcaccaat 340  Q
    ||||||| |||||||||||||| ||| |||||||||| | ||||||||| ||||||||  |||||||| ||||||| ||||| |||||| ||||||||||    
T  20029 cttcatttatggattttggctccatttgagaaatcatagccatgtttgttttgtcttggaatgatgatcttgttcttactttatcagcagtgtcaccaat 19930  T
Q  341 gattaactctttaggatgatcagcaactgattttcagttcggaggaatggatagagaagatgaatctggtttgtcttcatccttttgttttgatatatca 440  Q
    |||||| ||||| ||||||||| |||||||||| ||| | |||||||||          ||||||||||||  |||||||||||||||||||||||||||    
T  19929 gattaattcttttggatgatcaacaactgatttccagcttggaggaatg---------aatgaatctggttcatcttcatccttttgttttgatatatca 19839  T
Q  441 gaagtttgttgatgaatagaatgatgatgtccatct 476  Q
    || |||||||||||| ||||||||||| || |||||    
T  19838 gaggtttgttgatgactagaatgatgaggttcatct 19803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 94 - 469
Target Start/End: Original strand, 1799 - 2175
Alignment:
Q  94 cattttcatccagtttatttctga-acacccatcttgttccaatgatgtttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatt 192  Q
    |||||||||||||| ||||||||| |||| ||| |||||||||||||| ||| || |||| ||| ||| ||||||||||| ||||||||||| ||| |||    
T  1799 cattttcatccagtatatttctgacacacgcattttgttccaatgatggtttcgtcttgatgtttaggtaccaaattccatactttgtttctctcaaatt 1898  T
Q  193 tagaaagctcttcagtcatggcttcaatccatgattgatcagtgattgcttcattaatggattttggctctattagagaaatcattgtcatgtttgtctt 292  Q
     |||||||||||||||||||||||||||||||||||||| | ||||  ||||||| |||||||||||||||||| |||||||||  | ||| ||||  ||    
T  1899 gagaaagctcttcagtcatggcttcaatccatgattgattaatgataacttcatttatggattttggctctatttgagaaatcaaagccatatttgattt 1998  T
Q  293 gtcttgagatgatgatgttgttctcactttgtcagcactgtcaccaatgattaactctttaggatgatcagcaactgattttcagttcggaggaatggat 392  Q
    ||||||  |||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||    
T  1999 gtcttgttatgatgatcttgttcttactttatcagcagtgtcaccaatgattaactctttaggatgatcaacaactgatttccagcttggaggaatggat 2098  T
Q  393 agagaagatgaatctggtttgtcttcatccttttgttttgatatatcagaagtttgttgatgaatagaatgatgatg 469  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2099 agagaagatgaatttggttcgtcttcatccttttgttttgatatatcagaagtttgttgatgactagaatgatgatg 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-113; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 41 - 464
Target Start/End: Original strand, 40089318 - 40089732
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| || || ||||||| |||||| |||||||||||||||||||||||||||||||||||     
T  40089318 ttgttgattataaccttgagctactagtcttgctttgtttcttaccactttaccatcttcatctagtttatttctgaacacccatcttgttccaatgata 40089417  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||||| |||||||||||| || |||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||| |    
T  40089418 gttttgtcttgaggttcaggtactaaattccagactttgtttctttcaaattgagaaagttcttcagtcatggcttcaatccatgattgatcaatgatag 40089517  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtttgtcttgtcttgagatgatgatgttgttctcactttgtcagcactgtcaccaat 340  Q
    ||||||| |||||||||||||| ||| |||||||||| | ||||||||| ||||||||  |||||||| ||||||| ||||| |||||| ||||||||||    
T  40089518 cttcatttatggattttggctccatttgagaaatcatagccatgtttgttttgtcttggaatgatgatcttgttcttactttatcagcagtgtcaccaat 40089617  T
Q  341 gattaactctttaggatgatcagcaactgattttcagttcggaggaatggatagagaagatgaatctggtttgtcttcatccttttgttttgatatatca 440  Q
    |||||| ||||||||||||||| |||||||||| ||||| |||||||||          |||||| |||||  ||||||| ||| |||||||||| ||||    
T  40089618 gattaattctttaggatgatcaacaactgatttccagtttggaggaatg---------aatgaatttggttcatcttcattcttctgttttgatacatca 40089708  T
Q  441 gaagtttgttgatgaatagaatga 464  Q
    || |||||||||||  ||||||||    
T  40089709 gaggtttgttgatgtctagaatga 40089732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 41 - 389
Target Start/End: Complemental strand, 2159579 - 2159231
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  2159579 ttgttgattataaccttgagcaactagccttgctttgtttctgacaactttaccatcttcatctagtttatttctgaacacccatcttgttccaatgatg 2159480  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||||| | | |||||||| || |||||||| ||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||||| |||| |    
T  2159479 gttttgtctcgtggttcaggtactaaattccagactttgtttctttcaaattgagaaagttcttcattcatggcttcaatccatgattgatcaatgatag 2159380  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtttgtcttgtcttgagatgatgatgttgttctcactttgtcagcactgtcaccaat 340  Q
    ||||||| |||||||||||||| ||| |||| ||||| | ||||||||| ||||||||  |||||||| ||||||| ||||| |||||| ||||||||||    
T  2159379 cttcatttatggattttggctccatttgagagatcatagccatgtttgttttgtcttggaatgatgatcttgttcttactttatcagcagtgtcaccaat 2159280  T
Q  341 gattaactctttaggatgatcagcaactgattttcagttcggaggaatg 389  Q
    |||||| ||||||||||||||| |||||||||| ||| | |||||||||    
T  2159279 gattaattctttaggatgatcaacaactgatttccagcttggaggaatg 2159231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 6427052 - 6426807
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||||||||| | |||||| || || |||||||| |||||||||||||||||||||    
T  6427052 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttaccttcttcatcaagcttgtttctgaaaacccatcttgttccaatgatg 6426953  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| |||||||| || | |||| | || |    
T  6426952 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggcctcaatccaagagtcatcaataatgg 6426853  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||| ||||||| ||||||    
T  6426852 cttcattgattgacttgggttccatttgagagatcattgccatgtt 6426807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 8977591 - 8977346
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  8977591 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 8977492  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  8977491 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 8977392  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  8977391 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 8977346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 68 - 286
Target Start/End: Complemental strand, 16406327 - 16406109
Alignment:
Q  68 tcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgaggttcaggcaccaaa 167  Q
    |||||| |||||||||||||| ||||| | |||||| || || |||||||| ||||||||||||||||||||| |||| | ||||   |  || |||||     
T  16406327 tcttgctttgtttctgacaactttaccttcttcatcaagcttgtttctgaaaacccatcttgttccaatgatggttttatcttgattatttggaaccaag 16406228  T
Q  168 ttccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattgcttcattaatggattttggctctatta 267  Q
    ||||||||||||||||||||| | | |||||| |||||  ||||||| |||||||| || | |||| | || |||||||| || || || || || |||     
T  16406227 ttccaaactttgtttctttcaaactgagaaagttcttccttcatggcctcaatccaagagtcatcaataatggcttcattgattgacttgggttccattt 16406128  T
Q  268 gagaaatcattgtcatgtt 286  Q
    |||| ||||||| ||||||    
T  16406127 gagagatcattgccatgtt 16406109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 223
Target Start/End: Complemental strand, 9541881 - 9541699
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| | ||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  9541881 ttgttggttgtaaccttgagcaactaaccgtgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 9541782  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatcca 223  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | ||||||    
T  9541781 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatcca 9541699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 28360381 - 28360503
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||| || ||||| || |||||||||| ||| || || | |||||  ||||||||||| || || ||||||||||||||||||  ||  ||||||||    
T  28360381 cttgagctaccaatctagctttgtttctgataacttttccttcttcatttagtttatttctaaatacacatcttgttccaatgatggattgattttgagg 28360480  T
Q  155 ttcaggcaccaaattccaaactt 177  Q
    || ||| || | |||||| ||||    
T  28360481 tttaggaacaagattccatactt 28360503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 41 - 476
Target Start/End: Complemental strand, 20175674 - 20175248
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  20175674 ttgttgattataaccttgagcaactagccttgctttgtttctgacaactttaccatcttcatctagtttatttctgaacacccatcttgttccaatgatg 20175575  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||||| | | |||| ||| || |||||||| ||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||||| |||| |    
T  20175574 gttttgtctcgtggtttaggtactaaattccagactttgtttctttcaaattgagaaagttcttcattcatggcttcaatccatgattgatcaatgatag 20175475  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtttgtcttgtcttgagatgatgatgttgttctcactttgtcagcactgtcaccaat 340  Q
    ||||||| |||||||||||||| ||| |||| ||||| | ||||||||| ||||||||  |||||||| ||||||| ||||| |||||| ||||||||||    
T  20175474 cttcatttatggattttggctccatttgagatatcatagccatgtttgttttgtcttggaatgatgatcttgttcttactttatcagcagtgtcaccaat 20175375  T
Q  341 gattaactctttaggatgatcagcaactgattttcagttcggaggaatggatagagaagatgaatctggtttgtcttcatccttttgttttgatatatca 440  Q
    |||||| | ||| ||||||||| |||||||||| ||| | |||||||||          |||||| || ||  |||||||  ||||||||||||||||||    
T  20175374 gattaatttttttggatgatcaacaactgatttccagcttggaggaatg---------tatgaatttgtttcatcttcatttttttgttttgatatatca 20175284  T
Q  441 gaagtttgttgatgaatagaatgatgatgtccatct 476  Q
    || |||||||||||  ||||||||||| || |||||    
T  20175283 gatgtttgttgatgtctagaatgatgaggttcatct 20175248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 2e-72; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 21081392 - 21081582
Alignment:
Q  23 atcatcaaaatagactttttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacc 122  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21081392 atcatcaaaatagacttcttgttgattataaccttgagcaactaatcttggcttgtttctgacaaccttaccattttcatccagtttatttctgaacacc 21081491  T
Q  123 catcttgttccaatgatgtttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatgg 213  Q
    |||||||||||||||||| |||||| |||||||||||  ||||||||||| |||||||| || ||| ||| |||||||| |||||||||||    
T  21081492 catcttgttccaatgatggttttgtcttgaggttcagataccaaattccagactttgttcctctcaaattgagaaagctattcagtcatgg 21081582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 320 - 476
Target Start/End: Original strand, 21081583 - 21081737
Alignment:
Q  320 tttgtcagcactgtcaccaatgattaactctttaggatgatcagcaactgattttcagttcggaggaatggatagagaagatgaatctggtttgtcttca 419  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||||| |||| ||| | ||| |  |||||||||||||||||||||||| |||||||    
T  21081583 tttgtcagcagtgtcacaaatgattaactctttaggatgatcaacaactaatttccagcttggacg--tggatagagaagatgaatctggttcgtcttca 21081680  T
Q  420 tccttttgttttgatatatcagaagtttgttgatgaatagaatgatgatgtccatct 476  Q
     | ||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  21081681 acattttgttttgatatatcagaagtttgttgatgactagaatgatgatgttcatct 21081737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 20952606 - 20952361
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||| ||||||| ||||  ||||| |||||||||||||||||||| | |||||| || || || ||||| |||||||||||||||||||||    
T  20952606 ttgttgattgtaaccttgagctactagccttgctttgtttctgacaaccttaccttcttcatcaagcttgttcctgaaaacccatcttgttccaatgatg 20952507  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     ||||| |||||   |  || || |||||||||||||| ||||||||| | | |||||| |||||  ||||||||||||||||||| | |||| |||| |    
T  20952506 gttttgctttgattatttggaactaaattccaaactttatttctttcaaactgagaaagttcttccttcatggcttcaatccatgagtcatcaatgatgg 20952407  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || | | |||||||||||| ||||||    
T  20952406 cttcattgattgacttaggttccaattgagaaatcattgccatgtt 20952361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 27416876 - 27416631
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||||||||| | |||||| ||||| |||||||| |||||| ||||||||||||||    
T  27416876 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttaccttcttcatcaagtttgtttctgaaaacccatgttgttccaatgatg 27416777  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| |||||||| || | |||| | || |    
T  27416776 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggcctcaatccaagagtcatcaataatgg 27416677  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||| ||||||||||||||    
T  27416676 cttcattgattgacttgggttccatttgagagatcattgtcatgtt 27416631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 18384485 - 18384240
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  18384485 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 18384386  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  18384385 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 18384286  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  18384285 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 18384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Original strand, 26197921 - 26198166
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  26197921 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 26198020  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  26198021 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 26198120  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  26198121 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 26198166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 33944065 - 33943820
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  33944065 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 33943966  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||| | ||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  33943965 gttttatcttgattatttggaaccaagttccaaactctatttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 33943866  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  33943865 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 33943820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 55 - 223
Target Start/End: Original strand, 19381388 - 19381556
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||||||||| ||||| |||||||| ||||||||||| | |||||| || || |||||||| ||| ||||||| ||||||||| |||||  ||||      
T  19381388 cttgagcaactaaccttgctttgtttctaacaaccttaccttcttcatcaagcttgtttctgaaaacctatcttgtaccaatgatggttttgccttgatc 19381487  T
Q  155 ttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatcca 223  Q
     |  || || || ||||||||||||||||||||| | | |||||| | |||  ||||||| ||||||||    
T  19381488 atttggaactaagttccaaactttgtttctttcaaactgagaaagttattctttcatggcctcaatcca 19381556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 30450278 - 30450414
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||  ||||||| || ||||| || |||||||||| ||| || || | |||||  ||||||||||| || |||||||||||||||||||||    
T  30450278 ttgttgattgtacccttgagctaccaatctagctttgtttctgataacttttccttcttcatttagtttatttctaaatacccatcttgttccaatgatg 30450377  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactt 177  Q
      ||  |||||||||| ||| || | |||||| ||||    
T  30450378 gattgattttgaggtttaggaacaagattccatactt 30450414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 24296248 - 24296343
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaat 136  Q
    ||||||||| ||  |||| ||||||||||| || || ||||||| ||| || || | |||||| ||||||||||| || |||||||||||||||||    
T  24296248 ttgttgattgtagccttgtgcaactaatctggctttatttctgataacttttccttcttcatctagtttatttctaaaaacccatcttgttccaat 24296343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 24416930 - 24416794
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||  ||||||| || ||||| || ||||||||||  || || || | |||||  ||||||||||| || |||||||||||||||||||||    
T  24416930 ttgttgattgtacccttgagctaccaatctagctttgtttctgatgacttttccttcttcatttagtttatttctaaatacccatcttgttccaatgatg 24416831  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactt 177  Q
      ||  |||||||||| ||| || | |||||| ||||    
T  24416830 gattgattttgaggtttaggaacaagattccatactt 24416794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 26040415 - 26040463
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatc 103  Q
    ||||||| |||||||||||||||||||||   || ||||||||||||||    
T  26040415 cttgagctactaatcttgccttgtttctggttacattaccattttcatc 26040463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 41 - 286
Target Start/End: Original strand, 27165576 - 27165821
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||| ||||||| ||||  ||||| |||||||||||||||||||| | |||||| || || || ||||| |||||||||||||||||||||    
T  27165576 ttgttgattgtaaccttgagctactagccttgctttgtttctgacaaccttaccttcttcatcaagcttgttcctgaaaacccatcttgttccaatgatg 27165675  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     ||||| |||||   |  || || |||||||||||||||||||||||| | | |||||| |||||  ||||||||||||||||||| | |||| |||| |    
T  27165676 gttttgctttgattatttggaactaaattccaaactttgtttctttcaaactgagaaagttcttccttcatggcttcaatccatgagtcatcaatgatgg 27165775  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || | | |||||||||||| ||||||    
T  27165776 cttcattgattgacttaggttccaattgagaaatcattgccatgtt 27165821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 55 - 286
Target Start/End: Complemental strand, 45019081 - 45018850
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||||||||| ||||| |||||||||||||||||||| | |||||| ||||| |||||||| ||||||||||||||||||||| |||||| ||||      
T  45019081 cttgagcaactaaccttgctttgtttctgacaaccttaccttcttcatcaagtttgtttctgaaaacccatcttgttccaatgatggttttgtcttgatt 45018982  T
Q  155 ttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattgcttcattaatggat 254  Q
     |  || || |  ||||||||||| ||||||||| | | |||||| |||||  ||||||| |||||||| || | |||| | || |||||||| || ||     
T  45018981 atttggaactaggttccaaactttttttctttcaaactgagaaagttcttccttcatggcctcaatccaagagtcatcaataatagcttcattgattgac 45018882  T
Q  255 tttggctctattagagaaatcattgtcatgtt 286  Q
    || || || ||| |||| ||||||| ||||||    
T  45018881 ttgggttccatttgagagatcattgccatgtt 45018850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Original strand, 9509360 - 9509605
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  9509360 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 9509459  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  9509460 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 9509559  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  9509560 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 9509605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 18655963 - 18655718
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  18655963 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 18655864  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||| ||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  18655863 gttttatcttgattatttggaaccaagttccaaactctgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 18655764  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  18655763 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 18655718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 22103245 - 22103160
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||||||| |||||||||||||||||  |||| ||  ||| |||||| || |||||||| ||||||||||||||||||||||||    
T  22103245 cttgagcaaccaatcttgccttgtttctagcaactttgtcatcttcatcaagcttatttctaaacacccatcttgttccaatgatg 22103160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 22906856 - 22906705
Alignment:
Q  75 ttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgaggttcaggcaccaaattccaaa 174  Q
    |||||||||| ||||||||| | |||||| || || ||||| || | ||||||||||| ||||||| ||| | |||||   |  || || ||||||||||    
T  22906856 ttgtttctgaaaaccttaccttcttcatcaagcttgtttctaaaaatccatcttgttctaatgatggtttcgctttgattatttggaactaaattccaaa 22906757  T
Q  175 ctttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatga 226  Q
    |||||||||||||  | | |||||| |||||  ||||||| |||||||||||    
T  22906756 ctttgtttctttctaactaagaaagttcttccttcatggcctcaatccatga 22906705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 24721287 - 24721387
Alignment:
Q  42 tgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgt 141  Q
    |||||| | ||| |||||||||| | |||||| ||||||||||| || | ||| | ||||| ||| || |||||||| |||||| |||||||||| ||||    
T  24721287 tgttgactgtaaccttgagcaacaagtcttgctttgtttctgactacttcaccttgttcattcagcttgtttctgaatacccattttgttccaataatgt 24721386  T
Q  142 t 142  Q
    |    
T  24721387 t 24721387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 55 - 286
Target Start/End: Complemental strand, 14288 - 14057
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||| ||||  ||||| |||||||||||||||||||| | |||||| || || |||||||| ||||||||||||||||||||| ||||| |||||      
T  14288 cttgagctactagccttgctttgtttctgacaaccttaccttcttcatcaagcttgtttctgaaaacccatcttgttccaatgatggttttgctttgatt 14189  T
Q  155 ttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattgcttcattaatggat 254  Q
     |  || || |||||||||||||||||||||||| ||| |||||| |||||  ||||||||||||||||||| | |||| | || |||||||| || ||     
T  14188 atttggaactaaattccaaactttgtttctttcaaattgagaaagttcttccttcatggcttcaatccatgagtcatcaataatggcttcattgattgac 14089  T
Q  255 tttggctctattagagaaatcattgtcatgtt 286  Q
    || || || | | |||||||||||| ||||||    
T  14088 ttgggttccaattgagaaatcattgccatgtt 14057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 131 - 1
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||| ||||  ||||| |||||||||||||||||||| | |||||| || || |||||||| ||||||||||||||||||||| ||||| |||||      
T  131 cttgagctactagccttgctttgtttctgacaaccttaccttcttcatcaagcttgtttctgaaaacccatcttgttccaatgatggttttgctttgatt 32  T
Q  155 ttcaggcaccaaattccaaactttgtttctt 185  Q
     |  || || |||||||||||||||||||||    
T  31 atttggaactaaattccaaactttgtttctt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 1e-33; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 41 - 286
Target Start/End: Original strand, 24927761 - 24928006
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||||||||| | |||||| || || |||||||| |||||||||||||||||||||    
T  24927761 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttaccttcttcatcaagcttgtttctgaaaacccatcttgttccaatgatg 24927860  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| |||||||| || | |||| | || |    
T  24927861 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggcctcaatccaagagtcatcaataatgg 24927960  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||| ||||||| ||||||    
T  24927961 cttcattgattgacttgggttccatttgagagatcattgccatgtt 24928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 16902691 - 16902446
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||||||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  16902691 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 16902592  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| |||||||| || | |||| | || |    
T  16902591 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggcctcaatccaagagtcatcaataatgg 16902492  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||| ||||||| ||||||    
T  16902491 cttcatttattgacttgggttccatttgagagatcattgccatgtt 16902446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 31361564 - 31361319
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  31361564 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 31361465  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  31361464 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 31361365  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  31361364 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 31361319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 286
Target Start/End: Complemental strand, 18164783 - 18164565
Alignment:
Q  68 tcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgaggttcaggcaccaaa 167  Q
    |||||| |||||||||||||| ||||| | |||||| || || ||||| || ||||||||||||||||||||| |||| | ||||   |  || |||||     
T  18164783 tcttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatggttttatcttgattatttggaaccaag 18164684  T
Q  168 ttccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattgcttcattaatggattttggctctatta 267  Q
    ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |||||||| || || || || || |||     
T  18164683 ttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatggcttcattgattgacttgggttccattt 18164584  T
Q  268 gagaaatcattgtcatgtt 286  Q
    |||||||||||| ||||||    
T  18164583 gagaaatcattgccatgtt 18164565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 41 - 223
Target Start/End: Original strand, 33497 - 33679
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||||||||  | |||||| || || |||||||| |||||||||||||||||||||    
T  33497 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttacgttcttcatcaagcttgtttctgaaaacccatcttgttccaatgatg 33596  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatcca 223  Q
     |||||| ||||  ||  || || || ||||||||||||||||||||| | | |||||| |||||  ||||||| ||||||||    
T  33597 gttttgtcttgattttttggaactaagttccaaactttgtttctttcaaactgagaaagttcttctttcatggcctcaatcca 33679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 9e-31; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 55 - 223
Target Start/End: Complemental strand, 16269787 - 16269619
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||||||||| ||||| |||||||||||||||||||  | |||||| || || |||||||| ||||||||||||||||||||| |||||| ||||      
T  16269787 cttgagcaactaaccttgctttgtttctgacaaccttacgttcttcatcaagcttgtttctgaaaacccatcttgttccaatgatggttttgtcttgatt 16269688  T
Q  155 ttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatcca 223  Q
    ||  || || || ||||||||||||||||||||| | | |||||| |||||  ||||||| ||||||||    
T  16269687 ttttggaactaagttccaaactttgtttctttcaaactgagaaagttcttctttcatggcctcaatcca 16269619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 6696963 - 6696718
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  6696963 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 6696864  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  6696863 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 6696764  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  6696763 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 6696718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 223
Target Start/End: Complemental strand, 17156147 - 17155979
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||||||||| ||||| |||||||||||||||||||| | |||||| || || ||| |||| || |||||||| ||||||||| |||||  ||||      
T  17156147 cttgagcaactaaccttgctttgtttctgacaaccttaccttcttcatcaagcttgtttatgaaaactcatcttgtaccaatgatggttttgccttgatc 17156048  T
Q  155 ttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatcca 223  Q
     |  || || || ||||||||||||||||||||| | | |||||| |||||  ||||||| ||||||||    
T  17156047 atttggaactaagttccaaactttgtttctttcaaactgagaaagttcttctttcatggcctcaatcca 17155979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 26816591 - 26816455
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||  ||||||| || ||||| || |||||||||| ||| || || | |||||  ||||||||||| || |||||||||||||||||||||    
T  26816591 ttgttgattgtacccttgagctaccaatctagctttgtttctgataacttttccttcttcatttagtttatttctaaatacccatcttgttccaatgatg 26816492  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactt 177  Q
      ||  |||||||||| ||| || | |||||| ||||    
T  26816491 gattgattttgaggtttaggaacaagattccatactt 26816455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 54695462 - 54695598
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||  ||||||| || ||||| || |||||||||| ||| || || | |||||  ||||||||||| || |||||||||||||||||||||    
T  54695462 ttgttgattgtacccttgagctaccaatctagctttgtttctgataacttttccttcttcatttagtttatttctaaatacccatcttgttccaatgatg 54695561  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactt 177  Q
      ||  |||||||||| ||| || | |||||| ||||    
T  54695562 gattgattttgaggtttaggaacaagattccatactt 54695598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Original strand, 13574 - 13819
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  13574 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 13673  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  13674 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 13773  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  13774 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 13819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 6e-29; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 6539222 - 6538977
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  6539222 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 6539123  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  6539122 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 6539023  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  6539022 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 6538977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 8505794 - 8505549
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  8505794 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 8505695  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||| ||||||||||| | | |||||| |||||  ||||||| | |||||| |||| |||| | || |    
T  8505694 gttttatcttgattatttggaaccaagttccaaactctgtttctttcaaactgagaaagttcttccttcatggccttaatccaagattcatcaataatgg 8505595  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  8505594 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 8505549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Original strand, 16137780 - 16138025
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||||||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  16137780 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 16137879  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||| | |||||||| || | |||| | || |    
T  16137880 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatgacctcaatccaagagtcatcaataatgg 16137979  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||| ||||||| ||||||    
T  16137980 cttcatttattgacttgggttccatttgagagatcattgccatgtt 16138025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 32103125 - 32102880
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  32103125 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 32103026  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  32103025 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 32102926  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  32102925 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 32102880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 46501859 - 46501614
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  46501859 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 46501760  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  46501759 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 46501660  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  46501659 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 46501614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 55 - 286
Target Start/End: Original strand, 9540850 - 9541081
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||||||||| ||||| |||||| ||||||||||||| | |||||| ||||| |||||||| | ||||||||||||||||||| |||||| || |      
T  9540850 cttgagcaactaaccttgctttgtttttgacaaccttaccttcttcatcaagtttgtttctgaaaatccatcttgttccaatgatggttttgtcttaatt 9540949  T
Q  155 ttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattgcttcattaatggat 254  Q
     |  || || |  ||||||||||||||||||||||| | |||||| |||||  ||||||| |||||||| || | |||| | || |||||||| || ||     
T  9540950 atttggaactaggttccaaactttgtttctttcatactgagaaagttcttccttcatggcctcaatccaagagtcatcaataatagcttcattgattgac 9541049  T
Q  255 tttggctctattagagaaatcattgtcatgtt 286  Q
    || || || ||| |||| ||||||| ||||||    
T  9541050 ttgggttccatttgagagatcattgccatgtt 9541081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 286
Target Start/End: Original strand, 5387511 - 5387756
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  5387511 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 5387610  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| | |||  ||||||| | |||||| || | |||| | || |    
T  5387611 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagtttttccttcatggccttaatccaagagtcatcaataatgg 5387710  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  5387711 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 5387756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 286
Target Start/End: Original strand, 26353895 - 26354140
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  26353895 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 26353994  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||||||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  26353995 gttttatcttgattatttggaaccaagttccaaactttgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 26354094  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||| ||||||| ||||||    
T  26354095 cttcattgattgacttgggttccatttgagagatcattgccatgtt 26354140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 44902102 - 44901857
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| |||||||||||||| ||||| | |||||| || || ||||| || |||||||||||||||||||||    
T  44902102 ttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttaccttcttcatcaagcttgtttctaaaaacccatcttgttccaatgatg 44902003  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatccatgattgatcagtgattg 240  Q
     |||| | ||||   |  || ||||| ||||||||| ||||||||||| | | |||||| |||||  ||||||| | |||||| || | |||| | || |    
T  44902002 gttttatcttgattatttggaaccaagttccaaactctgtttctttcaaactgagaaagttcttccttcatggccttaatccaagagtcatcaataatgg 44901903  T
Q  241 cttcattaatggattttggctctattagagaaatcattgtcatgtt 286  Q
    ||||||| || || || || || ||| |||||||||||| ||||||    
T  44901902 cttcattgattgacttgggttccatttgagaaatcattgccatgtt 44901857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 223
Target Start/End: Complemental strand, 18663616 - 18663448
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    |||||||||| || ||||| |||||||||||||||||||  | |||||| || || ||| |||| | ||||||||||||||||||| |||||  ||||      
T  18663616 cttgagcaaccaaccttgctttgtttctgacaaccttactttcttcatcaagcttgtttttgaaaaaccatcttgttccaatgatggttttgccttgatt 18663517  T
Q  155 ttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatcca 223  Q
     |  || || || ||||||||||||||||||||| | | |||||| || ||  ||||||| ||||||||    
T  18663516 atttggaactaagttccaaactttgtttctttcaaactaagaaagttcctccctcatggcctcaatcca 18663448  T

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Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 15179836 - 15179700
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||  ||||||| || ||||| || |||||||||| ||| || || | |||||  ||||||||||| || |||||||||||||||||||||    
T  15179836 ttgttgattgtacccttgagctaccaatctagctttgtttctgataacttttccttcttcatttagtttatttctaaatacccatcttgttccaatgatg 15179737  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactt 177  Q
      ||  |||||||||| ||| || | |||||| ||||    
T  15179736 gattgattttgaggtttaggaacaagattccatactt 15179700  T

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Target: scaffold0611 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 223
Target Start/End: Complemental strand, 2677 - 2509
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||||||||| ||||| ||||||||||||||||||   | |||||| || || |||||||| ||||||||||||||||||||| |||||| ||||      
T  2677 cttgagcaactaaccttgctttgtttctgacaaccttaaattcttcatcaagcttgtttctgaaaacccatcttgttccaatgatggttttgtcttgatt 2578  T
Q  155 ttcaggcaccaaattccaaactttgtttctttcatatttagaaagctcttcagtcatggcttcaatcca 223  Q
    ||  || || || ||||||||||||||||||||| | | |||||| |||||  ||||||| ||||||||    
T  2577 ttttggaactaagttccaaactttgtttctttcaaactgagaaagttcttctttcatggcctcaatcca 2509  T

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Target: scaffold0141 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 188
Target Start/End: Complemental strand, 30614 - 30481
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||||||||| ||||| ||||||||||||||||| || | |||||| || || |||||||| ||||||||||||||||||||| ||||| |||||      
T  30614 cttgagcaactaaccttgctttgtttctgacaacctttccttcttcatcaagcttgtttctgaaaacccatcttgttccaatgatggttttgctttgatt 30515  T
Q  155 ttcaggcaccaaattccaaactttgtttctttca 188  Q
     |  || || || |||||||||||||||||||||    
T  30514 atttggaactaagttccaaactttgtttctttca 30481  T

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Target: scaffold0049 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 188
Target Start/End: Original strand, 84198 - 84331
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||||||||| ||||| ||||||||||||||||| || | |||||| || || |||||||| ||||||||||||||||||||| ||||| |||||      
T  84198 cttgagcaactaaccttgctttgtttctgacaacctttccttcttcatcaagcttgtttctgaaaacccatcttgttccaatgatggttttgctttgatt 84297  T
Q  155 ttcaggcaccaaattccaaactttgtttctttca 188  Q
     |  || || || |||||||||||||||||||||    
T  84298 atttggaactaagttccaaactttgtttctttca 84331  T

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Target: scaffold0764 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 183
Target Start/End: Original strand, 6489 - 6617
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgagg 154  Q
    ||||||| ||||  ||||| |||||||||||||||||||| | |||||| || || |||||||| ||||||||||||||||||||| ||||| |||||      
T  6489 cttgagctactagccttgctttgtttctgacaaccttaccttcttcatcaagcttgtttctgaaaacccatcttgttccaatgatggttttgctttgatt 6588  T
Q  155 ttcaggcaccaaattccaaactttgtttc 183  Q
     |  || || |||||||||||||||||||    
T  6589 atttggaactaaattccaaactttgtttc 6617  T

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Target: scaffold0059 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 46020 - 46124
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    |||||| || ||| ||||||||||||| ||||| || ||||||||||| || |||| |||||| || || |||||||| |||||||||||||||||||||    
T  46020 ttgttggttgtaaccttgagcaactaaccttgctttatttctgacaactttgccatcttcatcaagcttgtttctgaaaacccatcttgttccaatgatg 46119  T
Q  141 ttttt 145  Q
     ||||    
T  46120 gtttt 46124  T

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Target: scaffold0003 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 75 - 223
Target Start/End: Complemental strand, 153283 - 153135
Alignment:
Q  75 ttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttgttttgaggttcaggcaccaaattccaaa 174  Q
    |||||||||| ||||||||| | |||||| || || ||||| || ||||||||||||||||||||| ||||| |||||   |  |  || ||||||||||    
T  153283 ttgtttctgataaccttaccttcttcatcaagcttgtttcttaaaacccatcttgttccaatgatggttttgctttgattatttgtaactaaattccaaa 153184  T
Q  175 ctttgtttctttcatatttagaaagctcttcagtcatggcttcaatcca 223  Q
    ||||||||| |||| ||| |||||| |||||  ||||||| ||||||||    
T  153183 ctttgtttcgttcaaattgagaaagttcttccttcatggcctcaatcca 153135  T

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Target: scaffold0572 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 124 - 13
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||| ||||||| ||||  ||||| |||||||||||||||||||| | |||||| || || ||  |||| |||||||||||||||||||||    
T  124 ttgttgattgtaaccttgagctactagccttgctttgtttctgacaaccttaccttcttcatcaagcttgttcttgaaaacccatcttgttccaatgatg 25  T
Q  141 tttttgttttga 152  Q
     ||||| |||||    
T  24 gttttgctttga 13  T

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Target: scaffold0142 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 32516 - 32607
Alignment:
Q  55 cttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatgtttttg 146  Q
    ||||||||||||| ||||| ||  |||||||||||||||| | ||||||  |||| |||||||| || |||||||||||||||||| |||||    
T  32516 cttgagcaactaaccttgcttttcttctgacaaccttaccttcttcatcatgtttgtttctgaaaactcatcttgttccaatgatggttttg 32607  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 99976 - 100112
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||  ||||||| || ||||| || |||||||||| ||| || || | |||||  ||||||||||| || |||||||||||||||||||||    
T  99976 ttgttgattgtacccttgagctaccaatctagctttgtttctgataacttttccttcttcatttagtttatttctaaatacccatcttgttccaatgatg 100075  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactt 177  Q
      ||  |||||||||| ||| || | |||||| ||||    
T  100076 gattgattttgaggtttaggaacaagattccatactt 100112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 261180 - 261085
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaat 136  Q
    ||||||||| ||  |||| ||||||||||| || || ||||||| ||| || || | |||||| ||||||||||| || |||||||||||||||||    
T  261180 ttgttgattgtagccttgtgcaactaatctggctttatttctgataacttttccttcttcatctagtttatttctaaaaacccatcttgttccaat 261085  T

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Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 263483 - 263388
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaat 136  Q
    ||||||||| ||  |||| ||||||||||| |  || ||||||| ||| || || | |||||| ||||||||||| || |||||||||||||||||    
T  263483 ttgttgattgtagccttgtgcaactaatctggttttatttctgataacttttccttcttcatctagtttatttctaaaaacccatcttgttccaat 263388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 6994 - 6858
Alignment:
Q  41 ttgttgattataatcttgagcaactaatcttgccttgtttctgacaaccttaccattttcatccagtttatttctgaacacccatcttgttccaatgatg 140  Q
    ||||||||| ||  ||||||| || ||||| || |||||||||| ||| || || | |||||  ||||||||||| || | |||||||||||||||||||    
T  6994 ttgttgattgtacccttgagctaccaatctagctttgtttctgataacttttccttcttcatttagtttatttctaaatatccatcttgttccaatgatg 6895  T
Q  141 tttttgttttgaggttcaggcaccaaattccaaactt 177  Q
      ||  |||||||||| ||| || | |||||| ||||    
T  6894 gattgattttgaggtttaggaacaagattccatactt 6858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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