View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21582_low_18 (Length: 313)
Name: NF21582_low_18
Description: NF21582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21582_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 107 - 204
Target Start/End: Original strand, 35885133 - 35885230
Alignment:
| Q |
107 |
atctttgttggttaactgtgtcctctaatgcatgcttattcacatgttacgtgttatagattgtctcgcatgccactggaaacaacagatgtagagag |
204 |
Q |
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| T |
35885133 |
atctttgttggttaactgtgtcctctaatgcatgcttattcacatgttacgtgttatagattgtctcgcatgccactggaaacaacagatgtagagag |
35885230 |
T |
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Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 107 - 204
Target Start/End: Original strand, 24459334 - 24459431
Alignment:
| Q |
107 |
atctttgttggttaactgtgtcctctaatgcatgcttattcacatgttacgtgttatagattgtctcgcatgccactggaaacaacagatgtagagag |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24459334 |
atctttgttggttaactgtgtcctctaatgcatgcttattcacatgttacgtgttatagattgtctcgcatgccactggaaacaacagatgtagagag |
24459431 |
T |
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