View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21582_low_2 (Length: 673)
Name: NF21582_low_2
Description: NF21582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21582_low_2 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 570; Significance: 0; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 570; E-Value: 0
Query Start/End: Original strand, 20 - 613
Target Start/End: Complemental strand, 40597774 - 40597181
Alignment:
| Q |
20 |
tctgagacattcaatggccaaatggcaaattttcttaagttttagaggagaagatacacgctactcttttacaggtaatctgtataaagctttatgtcaa |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40597774 |
tctgagacattcaatggccaaatggcaaattttcttaagttttagaggagaagatacacgctactcttttacaggtaatctgtataaagctttatgtcaa |
40597675 |
T |
|
| Q |
120 |
gggggattcaagaccttcatggatgatggaggactgcacactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgatta |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40597674 |
gggggattcaagaccttcatggatgatggaggactgcacactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgatta |
40597575 |
T |
|
| Q |
220 |
tcattttgtctgaaaactatgcgaattcctcatggtgtcttgaagaacttgtcaaaattatggagtgtatgaaattgaagaatcaattagtttggccaat |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40597574 |
tcattttgtctgaaaactatgcgaattcctcatggtgtcttgaagaacttgtcaaaattatggagtgtatgaaattgaagaatcaattagtttggccaat |
40597475 |
T |
|
| Q |
320 |
cttttacaaagtggatccgtcagacataaggcatttgagaaaatgttatggcaaagacatggctcaacatgaaaataattttggaattgattcagagaga |
419 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
40597474 |
cttttacaaagtgaaaccgtcagacataaggcatttgagaaattgttatggcgaagacatggctcaacatgaaaataattttggaattgactcagagaga |
40597375 |
T |
|
| Q |
420 |
gtacagaaatggaagtcagctttgtttgaagtgtcgaatttgtccggaaaggcttatacaaccgggtatgtaatatccttcaaaagacttctatttgcat |
519 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40597374 |
gtacagaaatggaagtcagctttgtttgaagtgtcgaatttgtccggaaaggcttatacaaccgggtatgtaatatccttcaaaagacttctatttgcat |
40597275 |
T |
|
| Q |
520 |
tattctataataaccaatttttactttactagcgatagcagttaagaatatgatataatataattccatcgtctcggaaggtatgtgaattggt |
613 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
40597274 |
tattctataataaccaatttttactttactagcgatagcagttaagaatatgatataatataattccatagtctcggaaggtatgtgaattggt |
40597181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 57 - 489
Target Start/End: Original strand, 40387241 - 40387673
Alignment:
| Q |
57 |
agttttagaggagaagatacacgctactcttttacaggtaatctgtataaagctttatgtcaagggggattcaagaccttcatggatgatggaggactgc |
156 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||| ||| | | ||||||||| ||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
40387241 |
agttttagaggggaagatactcgctactcttttacaggtagtctttttcaagctttatcccaagggggattcaagactttcatggatgatgaaggactgc |
40387340 |
T |
|
| Q |
157 |
acactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgattatcattttgtctgaaaactatgcgaattcctcatggtg |
256 |
Q |
| |
|
||||||| ||| | ||||||| |||| |||||||||||||| |||||| || |||||||| ||||||||||||||||||| |||||| ||||||| |
|
|
| T |
40387341 |
acactggggaccgagtttcaccttgtcttagaaatgcaattgaagcatcaagactttcgattattgttttgtctgaaaactatgcaaattccacatggtg |
40387440 |
T |
|
| Q |
257 |
tcttgaagaacttgtcaaaattatggagtgtatgaaattgaagaatcaattagtttggccaatcttttacaaagtggatccgtcagacataaggcatttg |
356 |
Q |
| |
|
|||||| |||||||| || ||| | || |||| ||||| ||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
40387441 |
tcttgatgaacttgtgaagattcttgaatgtaagaaatggaataatcaattagtttggccaatcttttacaaagtagagccatcagacataaggcatttg |
40387540 |
T |
|
| Q |
357 |
agaaaatgttatggcaaagacatggctcaacatgaaaataattttggaattgattcagagagagtacagaaatggaagtcagctttgtttgaagtgtcga |
456 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| || || |||||||| || ||||||||||| |||||||||||||| ||| ||||||| || | |
|
|
| T |
40387541 |
agaaatggttatggcaaagacatggctcaacatgaaaaaaaattcggaattgactcggagagagtacaaaaatggaagtcagcattgcttgaagtttcta |
40387640 |
T |
|
| Q |
457 |
atttgtccggaaaggcttatacaaccgggtatg |
489 |
Q |
| |
|
|||||||||||| | |||| || || ||||||| |
|
|
| T |
40387641 |
atttgtccggaatgacttacacgactgggtatg |
40387673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 57 - 468
Target Start/End: Original strand, 40333963 - 40334374
Alignment:
| Q |
57 |
agttttagaggagaagatacacgctactcttttacaggtaatctgtataaagctttatgtcaagggggattcaagaccttcatggatgatggaggactgc |
156 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||| ||| | | ||||||||| ||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
40333963 |
agttttagaggggaagatactcgctactcttttacaggtagtctttttcaagctttatcccaagggggattcaagactttcatggatgatgaaggactgc |
40334062 |
T |
|
| Q |
157 |
acactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgattatcattttgtctgaaaactatgcgaattcctcatggtg |
256 |
Q |
| |
|
||||||| ||| | ||||||| |||| |||||||||||||| |||||| || |||||||| ||||||||||||||||||| |||||| ||||||| |
|
|
| T |
40334063 |
acactggggaccgagtttcaccttgtcttagaaatgcaattgaagcatcaagactttcgattattgttttgtctgaaaactatgcaaattccacatggtg |
40334162 |
T |
|
| Q |
257 |
tcttgaagaacttgtcaaaattatggagtgtatgaaattgaagaatcaattagtttggccaatcttttacaaagtggatccgtcagacataaggcatttg |
356 |
Q |
| |
|
|||||| |||||||| || ||| | || |||| ||||| ||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
40334163 |
tcttgatgaacttgtgaagattcttgaatgtaagaaatggaataatcaattagtttggccaatcttttacaaagtagagccatcagacataaggcatttg |
40334262 |
T |
|
| Q |
357 |
agaaaatgttatggcaaagacatggctcaacatgaaaataattttggaattgattcagagagagtacagaaatggaagtcagctttgtttgaagtgtcga |
456 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| | |||||||| || || ||||||||||| ||||||||||| |||||| ||||||| || | |
|
|
| T |
40334263 |
agaaaaagttatggcaaagacatggctcaacatgaaagaagatttggaatagactcggagagagtacaaaaatggaagtctgctttgcttgaagtttcta |
40334362 |
T |
|
| Q |
457 |
atttgtccggaa |
468 |
Q |
| |
|
|||||||||||| |
|
|
| T |
40334363 |
atttgtccggaa |
40334374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 22 - 468
Target Start/End: Original strand, 40376961 - 40377407
Alignment:
| Q |
22 |
tgagacattcaatggccaaatggcaaattttcttaagttttagaggagaagatacacgctactcttttacaggtaatctgtataaagctttatgtcaagg |
121 |
Q |
| |
|
|||||||||||| || ||||||| || ||| | ||||||||||| | ||||| |||||||| |||||||||| ||| | | ||||||||| ||||| |
|
|
| T |
40376961 |
tgagacattcaacggatcaatggcagatgttcctcagttttagagggggggatactcgctactcctttacaggtagtctttttcaagctttatcccaagg |
40377060 |
T |
|
| Q |
122 |
gggattcaagaccttcatggatgatggaggactgcacactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgattatc |
221 |
Q |
| |
|
||||||||||| |||||||||||| |||| |||||||||||||| |||||||| |||||| |||||||||||||| | |||| || || ||||| |
|
|
| T |
40377061 |
gggattcaagattttcatggatgataaaggattgcacactggagaccgaatttcacattctcttcgaaatgcaattgaagcaacaagactttcaattatt |
40377160 |
T |
|
| Q |
222 |
attttgtctgaaaactatgcgaattcctcatggtgtcttgaagaacttgtcaaaattatggagtgtatgaaattgaagaatcaattagtttggccaatct |
321 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||||| |||||||| || ||| | || |||| ||||| ||| |||||||||||||||||||||| |
|
|
| T |
40377161 |
gttttgtctgaaaactatgcaaattccacatggtgtcttgatgaacttgtgaagattcttgaatgtaagaaatggaataatcaattagtttggccaatct |
40377260 |
T |
|
| Q |
322 |
tttacaaagtggatccgtcagacataaggcatttgagaaaatgttatggcaaagacatggctcaacatgaaaataattttggaattgattcagagagagt |
421 |
Q |
| |
|
|||||||||| || || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| || || |||||||| |
|
|
| T |
40377261 |
tttacaaagtagagccatcagacataaggcatttgagaaaaggttatggcaaagacatggctcaacatgaaaaaaagtttggaatagactcggagagagt |
40377360 |
T |
|
| Q |
422 |
acagaaatggaagtcagctttgtttgaagtgtcgaatttgtccggaa |
468 |
Q |
| |
|
||| |||||||||||||||||| ||||||| || |||||||| |||| |
|
|
| T |
40377361 |
acaaaaatggaagtcagctttgcttgaagtttctaatttgtctggaa |
40377407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 156 - 495
Target Start/End: Original strand, 40277941 - 40278280
Alignment:
| Q |
156 |
cacactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgattatcattttgtctgaaaactatgcgaattcctcatggt |
255 |
Q |
| |
|
|||||||||||| |||||||||| |||||| ||||| ||||||||| | ||||||| || ||| | ||||||||||||||||||| | |||| |||||| |
|
|
| T |
40277941 |
cacactggagaccaaatttcaccaactcttttaaattcaattgaagcagcaaggctttcaattgttgttttgtctgaaaactatgcaagttccacatggt |
40278040 |
T |
|
| Q |
256 |
gtcttgaagaacttgtcaaaattatggagtgtatgaaattgaagaatcaattagtttggccaatcttttacaaagtggatccgtcagacataaggcattt |
355 |
Q |
| |
|
||||||| ||||||||||| ||| | || |||| ||||| ||| ||||||||||||||||| ||||||| ||||||||| || ||||| |||||| || | |
|
|
| T |
40278041 |
gtcttgatgaacttgtcaagattcttgaatgtaggaaatcgaataatcaattagtttggccgatctttttcaaagtggagccatcagaaataaggtatat |
40278140 |
T |
|
| Q |
356 |
gagaaaatgttatggcaaagacatggctcaacatgaaaataattttggaattgattcagagagagtacagaaatggaagtcagctttgtttgaagtgtcg |
455 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||| | |||||||| || || ||||||||||| ||||||| ||||||||| | |||||||| |
|
|
| T |
40278141 |
gagagaatgttatggcaaagacatggctcgacatgaaagaagatttggaatagactcggagagagtacaaaaatggagatcagctttgatcgaagtgtct |
40278240 |
T |
|
| Q |
456 |
aatttgtccggaaaggcttatacaaccgggtatgtaatat |
495 |
Q |
| |
|
||| | ||||||||| |||||| | ||||||| ||||||| |
|
|
| T |
40278241 |
aatatatccggaaagacttatagatccgggtaagtaatat |
40278280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 41 - 486
Target Start/End: Original strand, 40303490 - 40303930
Alignment:
| Q |
41 |
atggcaaattttcttaagttttagaggagaagatacacgctactcttttacaggtaatctgtataaagctttatgtcaagggggattcaagaccttcatg |
140 |
Q |
| |
|
|||||| |||||| | |||||||||||||||||||| || ||||||||||| ||| ||| ||| | ||| | |||| || |||||||| || |||||| |
|
|
| T |
40303490 |
atggcagattttcatcagttttagaggagaagatactcggtactcttttacgggttttctctatgatgctctctgtcgagaaggattcaaaacattcatg |
40303589 |
T |
|
| Q |
141 |
gatgatggaggactgcacactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgattatcattttgtctgaaaactatg |
240 |
Q |
| |
|
||| |||| ||| |||| | ||| ||| ||||||||||| ||||| | ||| ||||| ||||| ||| |||||| | ||||||||||||| |||| |
|
|
| T |
40303590 |
gattatgggggattgcatattggggaccaaatttcaccctctcttattaat-----tgaagcatcaaagctttcgattgttgttttgtctgaaaattatg |
40303684 |
T |
|
| Q |
241 |
cgaattcctcatggtgtcttgaagaacttgtcaaaattatggagtgtatgaaattgaagaatcaattagtttggccaatcttttacaaagtggatccgtc |
340 |
Q |
| |
|
| | ||||| |||||||||||| || |||| || || | |||||| ||| | |||||||||||| |||||||| ||||||||||||||| | || || |
|
|
| T |
40303685 |
caagttcctaatggtgtcttgatgagcttgcgaagatccttcagtgtaagaagtcgaagaatcaattggtttggcctatcttttacaaagtgaaaccttc |
40303784 |
T |
|
| Q |
341 |
agacataaggcatttgagaaaatgttatggcaaagacatggctcaacatgaaaataattttggaattgattcagagagagtacagaaatggaagtcagct |
440 |
Q |
| |
|
||| ||||| ||| ||||||| ||||||||||| | ||| || ||||| || | || || |||| |||||| |||||| |||||||||||||||||||| |
|
|
| T |
40303785 |
agatataagacatatgagaaatagttatggcaaatatatgactgaacataaacaaaaattcggaagtgattctgagagattacagaaatggaagtcagct |
40303884 |
T |
|
| Q |
441 |
ttgtttgaagtgtcgaatttgtccggaaaggcttatacaaccgggt |
486 |
Q |
| |
|
|| |||||||| || |||||| ||||||||||||| || ||||| |
|
|
| T |
40303885 |
ttttttgaagtttctggtttgtctggaaaggcttataaaatcgggt |
40303930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 123 - 451
Target Start/End: Complemental strand, 40257012 - 40256684
Alignment:
| Q |
123 |
ggattcaagaccttcatggatgatggaggactgcacactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgattatca |
222 |
Q |
| |
|
||||| || |||||||||||||| |||||| || | ||| ||| ||||||||| | ||||| ||||||||||||| ||||||||| || ||||| |
|
|
| T |
40257012 |
ggatttaaaaccttcatggatgaaggaggattggagggtggtgaccaaatttcactttcacttctcaatgcaattgaagcatcaaggctttccattattg |
40256913 |
T |
|
| Q |
223 |
ttttgtctgaaaactatgcgaattcctcatggtgtcttgaagaacttgtcaaaattatggagtgtatgaaattgaagaatcaattagtttggccaatctt |
322 |
Q |
| |
|
|||| || ||||||| ||| |||| ||||||||||| || |||||||| || ||| | |||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
40256912 |
ttttatccgaaaactttgcatattcatcatggtgtctcgatgaacttgttaagattcttgagtgtatgaaaatgaagaatcaattagtttggccaatttt |
40256813 |
T |
|
| Q |
323 |
ttacaaagtggatccgtcagacataaggcatttgagaaaatgttatggcaaagacatggctcaacatgaaaataattttggaattgattcagagagagta |
422 |
Q |
| |
|
|||||||||||| || ||||| ||||| || || || ||||||| |||| ||| || ||||||||||||||||||||| ||||| |||| || |
|
|
| T |
40256812 |
ttacaaagtggagccatcagatgtaaggtatcagaagaatagttatggtaaagcaatgactgaacatgaaaataattttggaaatgattatgagaagata |
40256713 |
T |
|
| Q |
423 |
cagaaatggaagtcagctttgtttgaagt |
451 |
Q |
| |
|
|| ||||||| |||||||||||| |||| |
|
|
| T |
40256712 |
caaaaatggagatcagctttgtttcaagt |
40256684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 69 - 286
Target Start/End: Original strand, 40409077 - 40409294
Alignment:
| Q |
69 |
gaagatacacgctactcttttacaggtaatctgtataaagctttatgtcaagggggattcaagaccttcatggatgatggaggactgcacactggagaca |
168 |
Q |
| |
|
|||||||| ||||||||||||||||| ||| ||| | | ||| |||| | ||||||||| | |||||||||||||| ||| || | |||| || |
|
|
| T |
40409077 |
gaagatactcgctactcttttacaggatttctctatcatgatttgcgtcatgagggattcaaaatcttcatggatgatgagggattgaagggtggaaacc |
40409176 |
T |
|
| Q |
169 |
aaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgattatcattttgtctgaaaactatgcgaattcctcatggtgtcttgaagaact |
268 |
Q |
| |
|
||||||||| ||| | || || ||||||||| |||||||||| || ||| | ||||||||||||||| || ||||| ||||||||||||| ||||| |
|
|
| T |
40409177 |
aaatttcacaaactttactcaaagcaattgaaaaatcaaggctttcaattgttgttttgtctgaaaactttggatattccacatggtgtcttgatgaact |
40409276 |
T |
|
| Q |
269 |
tgtcaaaattatggagtg |
286 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
40409277 |
tgtcaagattatggagtg |
40409294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 122 - 286
Target Start/End: Complemental strand, 40457422 - 40457258
Alignment:
| Q |
122 |
gggattcaagaccttcatggatgatggaggactgcacactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgattatc |
221 |
Q |
| |
|
||||||||||| |||||||||||||| ||| || | |||| || ||||||||| |||||| |||| ||||||||| |||||||||| || ||| | |
|
|
| T |
40457422 |
gggattcaagatcttcatggatgatgagggattggagggtggaaaccaaatttcacaaactcttttaaaagcaattgaaaaatcaaggctctcaattgtt |
40457323 |
T |
|
| Q |
222 |
attttgtctgaaaactatgcgaattcctcatggtgtcttgaagaacttgtcaaaattatggagtg |
286 |
Q |
| |
|
||||||| ||||| |||| |||| ||||||||||||| |||||||| || ||||||||||| |
|
|
| T |
40457322 |
gttttgtccgaaaattatggatattcgacatggtgtcttgatgaacttgtgaagattatggagtg |
40457258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 329
Target Start/End: Original strand, 40406421 - 40406628
Alignment:
| Q |
122 |
gggattcaagaccttcatggatgatggaggactgcacactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgattatc |
221 |
Q |
| |
|
||||||||||| |||||||||||||| ||| || | |||| || ||||||||| |||||||| | ||||||||| |||||||||| || ||| | |
|
|
| T |
40406421 |
gggattcaagatcttcatggatgatgagggattggagggtggaaaccaaatttcacaaactcttctcgaagcaattgaaaaatcaaggctttcaattgtt |
40406520 |
T |
|
| Q |
222 |
attttgtctgaaaactatgcgaattcctcatggtgtcttgaagaacttgtcaaaattatggagtgtatgaaattgaagaatcaattagtttggccaatct |
321 |
Q |
| |
|
||||||||||||||| || ||||| | ||||||||||| ||||| | ||| ||||| |||| ||||| ||||||||||| |||||||| || | |
|
|
| T |
40406521 |
gttttgtctgaaaactttggatattccacgtggtgtcttgatgaactagacaagattatcaagtgcatgaagaccaagaatcaattggtttggcctattt |
40406620 |
T |
|
| Q |
322 |
tttacaaa |
329 |
Q |
| |
|
|||||||| |
|
|
| T |
40406621 |
tttacaaa |
40406628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 40326390 - 40326482
Alignment:
| Q |
55 |
taagttttagaggagaagatacacgctactcttttacaggtaatctgtataaagctttatgtcaagggggattcaagaccttcatggatgatg |
147 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||| |||||| ||| ||||| | | |||| || ||| |||||||||||||||||||||| |
|
|
| T |
40326390 |
taagttttaaaggagaagatactcgctactctttcacaggttttctctataatattctgtgtcgagaggggttcaagaccttcatggatgatg |
40326482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 637 - 673
Target Start/End: Complemental strand, 40597157 - 40597121
Alignment:
| Q |
637 |
tgctcttctttatagctgctatcaattgaagtataat |
673 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40597157 |
tgctcttctttatagctgctatcaattgaagtataat |
40597121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 40283446 - 40283554
Alignment:
| Q |
39 |
aaatggcaaattttcttaagttttagaggagaagatacacgctactcttttacaggtaatctgtataaagctttatgtcaagggggattcaagaccttca |
138 |
Q |
| |
|
|||||||| |||||| | ||||||||||| |||||||| || | |||||||||||| ||| ||| | ||||| || | | ||| ||||||||||||| |
|
|
| T |
40283446 |
aaatggcagattttcctcagttttagaggggaagatactcgtcagtcttttacaggttttctctatgatgctttgtgccgggaggggttcaagaccttca |
40283545 |
T |
|
| Q |
139 |
tggatgatg |
147 |
Q |
| |
|
||||||||| |
|
|
| T |
40283546 |
tggatgatg |
40283554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 40388442 - 40388505
Alignment:
| Q |
223 |
ttttgtctgaaaactatgcgaattcctcatggtgtcttgaagaacttgtcaaaattatggagtg |
286 |
Q |
| |
|
||||||||||||||| || |||| ||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
40388442 |
ttttgtctgaaaactttggatattcgacatggtgtcttgatgaacttgtcaatattatggagtg |
40388505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 40362388 - 40362506
Alignment:
| Q |
122 |
gggattcaagaccttcatggatgatggaggactgcacactggagacaaaatttcacccactcttctaaatgcaattgaagaatcaaggctgtcgattatc |
221 |
Q |
| |
|
||||||||||| |||||||||||||| ||| || | |||| || ||||||||| ||||| || || ||||||||| |||||||||| || ||| | |
|
|
| T |
40362388 |
gggattcaagatcttcatggatgatgagggattggagggtggaaaccaaatttcacaaactctactcaaagcaattgaaaaatcaaggctttcaattgtt |
40362487 |
T |
|
| Q |
222 |
attttgtctgaaaactatg |
240 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
40362488 |
gttttgtctgaaaattatg |
40362506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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