View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21583_low_2 (Length: 547)
Name: NF21583_low_2
Description: NF21583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21583_low_2 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 348; Significance: 0; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 22858440 - 22858089
Alignment:
| Q |
1 |
tatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22858440 |
tatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaa |
22858341 |
T |
|
| Q |
101 |
tgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22858340 |
tgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggta |
22858241 |
T |
|
| Q |
201 |
attgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctgagctaagaatatttgcta |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22858240 |
attgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctgagctaagaatatttgcta |
22858141 |
T |
|
| Q |
301 |
ctgagctaggaatatttaatgagaaaaaagagtcaaaaactttaactgttgg |
352 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22858140 |
ctgaactaggaatatttaatgagaaaaaagagtcaaaaactttaactgttgg |
22858089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 12 - 352
Target Start/End: Complemental strand, 22809611 - 22809271
Alignment:
| Q |
12 |
agtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaatgttgttaaac |
111 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||||| | |||||||| ||||||| ||| ||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
22809611 |
agtggctatcctatgcatgtatggattgaatatgatggtgaaaagaaaaagattgatgctactttagctccaattaatgttggttttaatgttgttaaac |
22809512 |
T |
|
| Q |
112 |
cagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggtaattgtagcttc |
211 |
Q |
| |
|
|| |||||||||||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| || ||| || |||| |
|
|
| T |
22809511 |
caacacgacctttgttatcattcaccaaagatctttctccaattcttaacactagtatgtatgttggattctcatcttcaacaggttctattctatcttc |
22809412 |
T |
|
| Q |
212 |
ccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctgagctaagaatatttgctactgagctagga |
311 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||| || |
|
|
| T |
22809411 |
tcattatgttcttggttggagttttaaggttaatggtcaagctcaaaaccttgatatctctaaacttcctgagctaagaacatttgctcctgagctaaga |
22809312 |
T |
|
| Q |
312 |
atatttaatgagaaaaaagagtcaaaaactttaactgttgg |
352 |
Q |
| |
|
||| || | || |||||| ||||||||| |||||||||||| |
|
|
| T |
22809311 |
atacttgacgataaaaaaaagtcaaaaattttaactgttgg |
22809271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 349 - 530
Target Start/End: Original strand, 22858749 - 22858930
Alignment:
| Q |
349 |
ttggatagaaagcatgtgcagtatcttgcccgatatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtga |
448 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22858749 |
ttggatagaaagcatgtgctgtatcttgcccgatatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtga |
22858848 |
T |
|
| Q |
449 |
tgattggaatcctttatagatgaaaccgttgtcttcacttgctaccaatgtaacaagcaaacataacataaagacaaacttg |
530 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22858849 |
tgattggaatcctttatagatgaaaccgttgtcttcacttgctaccaatgtaacaagcaaacataacataaagacaaacttg |
22858930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 65 - 329
Target Start/End: Complemental strand, 22885539 - 22885278
Alignment:
| Q |
65 |
tgatgttacattagctccaattaattttggttgtaatgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaat |
164 |
Q |
| |
|
||||||||| ||||||||||||| | |||||| || || ||||||| ||| ||||||||||||||| || ||||||||||||||||| ||||||||| |
|
|
| T |
22885539 |
tgatgttactttagctccaattagtgttggtttta---gtgataaaccaacacaacctttgttatcattgaccaaagatctttctccaatactcaacaat |
22885443 |
T |
|
| Q |
165 |
agaatgtatgttggattctcatcttcaaccggggtaattgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttg |
264 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22885442 |
agaatgtatgttggattctcatcttcaacagggttaattgtagcttctcattatattcttggttggagttttaaggttaatagccaagctcaaaaccttg |
22885343 |
T |
|
| Q |
265 |
aaatctctaaacttcctgagctaagaatatttgctactgagctaggaatatttaatgagaaaaaa |
329 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||| |||||||| | |||||| ||||||||||| |
|
|
| T |
22885342 |
aaatctctgaacttcctgagccaagaatatttgctcctgagctaagtatatttgatgagaaaaaa |
22885278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 22889270 - 22888993
Alignment:
| Q |
1 |
tatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaa |
100 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||| | | ||||| || |
|
|
| T |
22889270 |
tatccctttccagtggataccctatgcaggtatggattgaatatgatggagtgaagaaaaagattgatgttactttagcaccaatgagtgttggtgctag |
22889171 |
T |
|
| Q |
101 |
tgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggta |
200 |
Q |
| |
|
| | |||||| ||| ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
22889170 |
taat---aaaccaacacaacctttgttatcattgaccaaagatctttcttcaattctcaacaatagaatgtatgttggattctcatcttcaacagggtta |
22889074 |
T |
|
| Q |
201 |
attgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcct |
281 |
Q |
| |
|
|| |||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
22889073 |
atggtagcttctcagtatattcttggttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcct |
22888993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 22815005 - 22814710
Alignment:
| Q |
1 |
tatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaa |
100 |
Q |
| |
|
|||||||||| | ||||| |||||| ||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||||| | | ||||| || |
|
|
| T |
22815005 |
tatccctttccaatggatttcctatacaggtatggattgactatgatggagtgaagaaaaagattgatgttactttagctccaatgagtgttggtgctag |
22814906 |
T |
|
| Q |
101 |
tgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggta |
200 |
Q |
| |
|
| | |||||| ||| ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
22814905 |
taat---aaaccaacacaacctttgttatcattgaccaaagatctttcttcaattctcaacaatagaatgtatgttggattctcatcttcaacagggtta |
22814809 |
T |
|
| Q |
201 |
attgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctgagctaagaatatttgct |
299 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| | |||||||| |
|
|
| T |
22814808 |
cttgtagcttctcattatattcttgggtggagttttaaggttaatggccaagctcaaaaccttgaaatatctgaacttcctaagctaacagtatttgct |
22814710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 22880569 - 22880274
Alignment:
| Q |
1 |
tatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaa |
100 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||| |||| | |||||| ||| |
|
|
| T |
22880569 |
tatccctttccagtggatatcccatgcaggtatggattgactatgatggagtgaagaaaaagattgaggttacattagctccgattagtgttggttttaa |
22880470 |
T |
|
| Q |
101 |
tgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggta |
200 |
Q |
| |
|
| | |||||| |||||| |||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || || |
|
|
| T |
22880469 |
taat---aaaccaacacgacatttgttgtcattgaccaaagatctttctccaattctcaacaatagtatgtatgttggattatcatcttcaacaaggtta |
22880373 |
T |
|
| Q |
201 |
attgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctgagctaagaatatttgct |
299 |
Q |
| |
|
||| ||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| ||||| || | |||||||| |
|
|
| T |
22880372 |
attttagcttctcattatgttcttggttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgagcttcatgagccaatagtatttgct |
22880274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 22875894 - 22875623
Alignment:
| Q |
1 |
tatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaa |
100 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| || |||||||||||||| ||||| ||||||||||| ||||||||||| || | | |||| |
|
|
| T |
22875894 |
tatcccttttcagtggatatcccatgcaggtatggattgactatgatggagtgaaaaaaaagattgatgttactttagctccaatagat---gctagtaa |
22875798 |
T |
|
| Q |
101 |
tgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggta |
200 |
Q |
| |
|
| |||||| ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
22875797 |
t------aaaccaacacaacctttgttatcattgaccaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaacaggttta |
22875704 |
T |
|
| Q |
201 |
attgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcct |
281 |
Q |
| |
|
||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |
|
|
| T |
22875703 |
attttagcttctcattatattcttggttggagttttaaggttaatggtcaagctcaaacccttgaaatctctgaacttcct |
22875623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 22831009 - 22830731
Alignment:
| Q |
1 |
tatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaa |
100 |
Q |
| |
|
|||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| ||| | |||||| || |
|
|
| T |
22831009 |
tatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaagattgatgttaccttagctccagttagtgttggttttag |
22830910 |
T |
|
| Q |
101 |
tgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggta |
200 |
Q |
| |
|
| | |||||| ||| ||| ||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
22830909 |
tcat---aaaccaacacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttc |
22830813 |
T |
|
| Q |
201 |
attgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctg |
282 |
Q |
| |
|
|||| |||||| |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| | ||||||| |
|
|
| T |
22830812 |
attgcagcttctcattatattcatggttggagttttatggttaatggccaatctcaaaaccttgaaatctctgaccttcctg |
22830731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 22840030 - 22839752
Alignment:
| Q |
1 |
tatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaa |
100 |
Q |
| |
|
||||||| || ||||||||||||||||| |||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||| ||| | |||||| || |
|
|
| T |
22840030 |
tatccctctccagtggatatcctatgcaagtatggattgaatatgatagagtgaagaaaaagattgatgttaccttagctccatttagtgttggttttag |
22839931 |
T |
|
| Q |
101 |
tgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggta |
200 |
Q |
| |
|
| | |||||| ||| ||| ||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
22839930 |
tcat---aaaccaacacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttc |
22839834 |
T |
|
| Q |
201 |
attgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctg |
282 |
Q |
| |
|
|||| |||||| |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| | ||||||| |
|
|
| T |
22839833 |
attgcagcttctcattatattcatggttggagttttatggttaatggccaatctcaaaaccttgaaatctctgaccttcctg |
22839752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 5 - 281
Target Start/End: Complemental strand, 22805283 - 22805019
Alignment:
| Q |
5 |
cctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaatgtt |
104 |
Q |
| |
|
|||||| |||||| ||||||| ||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||| || || ||| |
|
|
| T |
22805283 |
cctttccagtggaaatcctatacaggtatggattgattatgatggagtgaagaaaaagattgatgttactttagctccagtttat------------gtt |
22805196 |
T |
|
| Q |
105 |
gttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggtaattg |
204 |
Q |
| |
|
||||||||| || |||||| ||||||| | || |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| || ||| |
|
|
| T |
22805195 |
gttaaaccaacaggaccttcgttatcaatgaccaaagatctttctccaattcttaacaatagtatgtatgttggattctcatcttcaacagggttacttg |
22805096 |
T |
|
| Q |
205 |
tagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcct |
281 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || ||||| |
|
|
| T |
22805095 |
cagcttctcattatattcttggttggagttttaaggttaatggtcaagctcaaaaccttgtaatctctcaatttcct |
22805019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 349 - 530
Target Start/End: Original strand, 22831361 - 22831542
Alignment:
| Q |
349 |
ttggatagaaagcatgtgcagtatcttgcccgatatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtga |
448 |
Q |
| |
|
||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22831361 |
ttggatagaaagcatatgctgtatctggcccggtatcattggtgagtcttagtaagccatctgaagttaactcagcaataccatcaagatataaatgtga |
22831460 |
T |
|
| Q |
449 |
tgattggaatcctttatagatgaaaccgttgtcttcacttgctaccaatgtaacaagcaaacataacataaagacaaacttg |
530 |
Q |
| |
|
||||||||| || ||||||||||||| | |||||||||||||||| ||||||||||| ||| | |||||||| |||| |||| |
|
|
| T |
22831461 |
tgattggaaaccattatagatgaaactgctgtcttcacttgctacaaatgtaacaagaaaaaacaacataaacacaagcttg |
22831542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 284
Target Start/End: Complemental strand, 22893911 - 22893651
Alignment:
| Q |
12 |
agtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaatgttgttaaac |
111 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||| | |||||||| ||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
22893911 |
agtggctatcctatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttactttagctccaattaat------------gttgttaaac |
22893824 |
T |
|
| Q |
112 |
cagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggtaattgtagcttc |
211 |
Q |
| |
|
|| || ||||||||||||||| || |||||||||||||||||||| |||||||| |||||||||||||| ||||| | || || | || || |||| |
|
|
| T |
22893823 |
caaaacaacctttgttatcattgaccaaagatctttctccaattcttaacaatagtatgtatgttggattttcatcagctactggttcatttctaacttc |
22893724 |
T |
|
| Q |
212 |
ccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctgag |
284 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
22893723 |
tcattatattcttggttggagttttaagattaatggtcaagctcaaaaccttgtaatctctgaacttcctgag |
22893651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 39 - 281
Target Start/End: Complemental strand, 22913605 - 22913375
Alignment:
| Q |
39 |
gaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaatgttgttaaaccagcacgacctttgttatcattcacga |
138 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||| || ||||||||||||||| | | |
|
|
| T |
22913605 |
gaatatgatggagtgaagaaaaagattgatgttactttagctccaattaat------------gttgttaaaccaaaacaacctttgttatcattgaaca |
22913518 |
T |
|
| Q |
139 |
aagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggtaattgtagcttcccattatattcttggttggagttttaa |
238 |
Q |
| |
|
||||||||||| ||||||| |||| ||| |||||||||||||||||||||||||| || |||| || |||| |||||||||||||||||||||||||| |
|
|
| T |
22913517 |
aagatctttcttcaattcttaacactagtatgtatgttggattctcatcttcaacaggttcaattctaacttctcattatattcttggttggagttttaa |
22913418 |
T |
|
| Q |
239 |
ggttaatggccaagctcaaaaccttgaaatctctaaacttcct |
281 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||||| |||||||| |
|
|
| T |
22913417 |
ggttaatggtcaagctcaaaatcttgtaatctctgaacttcct |
22913375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 382 - 505
Target Start/End: Original strand, 22876279 - 22876402
Alignment:
| Q |
382 |
tatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcctttatagatgaaaccgttgtc |
481 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| || |
|
|
| T |
22876279 |
tatcattggtgagttttagtaagccatttgaggttaactcagcaataccatcaagatataaatttgatgattggaatccattatagatgaaactgttttc |
22876378 |
T |
|
| Q |
482 |
ttcacttgctaccaatgtaacaag |
505 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
22876379 |
ttcacttgctaccaatgtaacaag |
22876402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 382 - 503
Target Start/End: Original strand, 22889655 - 22889776
Alignment:
| Q |
382 |
tatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcctttatagatgaaaccgttgtc |
481 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| |
|
|
| T |
22889655 |
tatcattggtgagttttagtaagccatttgtagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtc |
22889754 |
T |
|
| Q |
482 |
ttcacttgctaccaatgtaaca |
503 |
Q |
| |
|
||||||||| |||||||||||| |
|
|
| T |
22889755 |
ttcacttgcaaccaatgtaaca |
22889776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 287
Target Start/End: Complemental strand, 22898223 - 22897967
Alignment:
| Q |
19 |
atcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaatgttgttaaaccagcacg |
118 |
Q |
| |
|
||||||||||||||||||| ||||||||||| | |||||||| ||||||||||| ||||||||||||||| |||||||||||| || |
|
|
| T |
22898223 |
atcctatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttactttagctccaattaat------------gttgttaaaccaaaaca |
22898136 |
T |
|
| Q |
119 |
acctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggtaattgtagcttcccattat |
218 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||||| | |||||||| |||||||||||||| ||||| | || || | || | |||| |||||| |
|
|
| T |
22898135 |
acctttgttgtcattgaccagagatctttctccaattttaaacaatagtatgtatgttggattttcatcagctactggttcagttttcacttctcattat |
22898036 |
T |
|
| Q |
219 |
attcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctgagcta |
287 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||| ||||| |
|
|
| T |
22898035 |
attcttggttggagttttaaggttaatggtcaagctgaaaaccttgtaatctctgaacttcctaagcta |
22897967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 382 - 530
Target Start/End: Original strand, 22810007 - 22810155
Alignment:
| Q |
382 |
tatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcctttatagatgaaaccgttgtc |
481 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||| || |
|
|
| T |
22810007 |
tatcattggtgagtcttagtaagccatctggggttaactcagcaataccatcaagatataaatgtgatgattggaaaccattatagatgaaactgttatc |
22810106 |
T |
|
| Q |
482 |
ttcacttgctaccaatgtaacaagcaaacataacataaagacaaacttg |
530 |
Q |
| |
|
|| ||||||||| ||||||||||| ||| | |||||||| |||| |||| |
|
|
| T |
22810107 |
tttacttgctactaatgtaacaagaaaaaacaacataaacacaagcttg |
22810155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 382 - 502
Target Start/End: Original strand, 22815390 - 22815510
Alignment:
| Q |
382 |
tatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcctttatagatgaaaccgttgtc |
481 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||| |
|
|
| T |
22815390 |
tatcattggtgagttttagtaagccatttgaggttaactcagcaataccatcaagatttaaatgtgatgattggaatccattatatatgaaactgttgtc |
22815489 |
T |
|
| Q |
482 |
ttcacttgctaccaatgtaac |
502 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
22815490 |
tacacttgctaccaatgtaac |
22815510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 382 - 525
Target Start/End: Original strand, 22805672 - 22805815
Alignment:
| Q |
382 |
tatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcctttatagatgaaaccgttgtc |
481 |
Q |
| |
|
||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||| || |
|
|
| T |
22805672 |
tatcattggtgagtcttagtatgccatctgaggttaactcagcaaaaccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatc |
22805771 |
T |
|
| Q |
482 |
ttcacttgctaccaatgtaacaagcaaacataacataaagacaa |
525 |
Q |
| |
|
|||||||||||| ||||||||| | ||| | |||||||| |||| |
|
|
| T |
22805772 |
ttcacttgctactaatgtaacatgaaaaaacaacataaacacaa |
22805815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 503
Target Start/End: Original strand, 22898593 - 22898747
Alignment:
| Q |
349 |
ttggatagaaagcatgtgcagtatcttgcccgatatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtga |
448 |
Q |
| |
|
||||||||||||||||||| | |||||| | |||||||||||||||| ||||||||| | || ||||| | ||||||||||||||||||||||||||| |
|
|
| T |
22898593 |
ttggatagaaagcatgtgctttttcttgcttggtatcattggtgagtctaagtaagccattggaggttaaattagcaataccatcaagatataaatgtga |
22898692 |
T |
|
| Q |
449 |
tgattggaatcctttatagatgaaaccgttgtcttcacttgctaccaatgtaaca |
503 |
Q |
| |
|
||||||||| || ||||||||||||| ||| |||| ||||||||||||||||||| |
|
|
| T |
22898693 |
tgattggaaaccattatagatgaaactgttatctttacttgctaccaatgtaaca |
22898747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 382 - 530
Target Start/End: Original strand, 22842527 - 22842681
Alignment:
| Q |
382 |
tatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcct------ttatagatgaaacc |
475 |
Q |
| |
|
||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
22842527 |
tatcattggtgagtcttggtaagccacctgaggttaactcagcaataccatcaagatacaaatgaaatgattggaatcctctattattatagatgaaact |
22842626 |
T |
|
| Q |
476 |
gttgtcttcacttgctaccaatgtaacaagcaaacataacataaagacaaacttg |
530 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| | |||||||| |||| |||| |
|
|
| T |
22842627 |
gttgtcttcacttgctaccaatgtaacaagaaaaaacaacataaacacaagcttg |
22842681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 18 - 281
Target Start/End: Complemental strand, 22826210 - 22825959
Alignment:
| Q |
18 |
tatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaatgttgttaaaccagcac |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | || ||||| ||||||||||| ||||||||||| |||||||||||||||| || |
|
|
| T |
22826210 |
tatcctatgcaggtatggatagaatatgatggtgaaaataaaaagattgatgttactttagctccaat------------taatgttgttaaaccaaaac |
22826123 |
T |
|
| Q |
118 |
gacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggtaattgtagcttcccatta |
217 |
Q |
| |
|
||||||||| ||||| || | ||||||| |||||||| | |||||||| |||||||||||||||||||| | || || | || | |||| ||||| |
|
|
| T |
22826122 |
aacctttgttttcattgaccagagatcttcctccaattttgaacaatagtatgtatgttggattctcatcagctactggttcagttttcacttctcatta |
22826023 |
T |
|
| Q |
218 |
tattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcct |
281 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| ||||||||||| |||| ||| ||| |||||||| |
|
|
| T |
22826022 |
tattcttggttgaagttttaagcttaatggtcaagctcaaaatcttgtaatttctgaacttcct |
22825959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 384 - 529
Target Start/End: Original strand, 22880929 - 22881080
Alignment:
| Q |
384 |
tcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcc------tttatagatgaaaccgt |
477 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||| || |||||||||||||||||||||||||||||| |||||||| |||||||||||||| || |
|
|
| T |
22880929 |
tcattggtgagtcttagtaagccatttgagtttaccttagcaataccatcaagatataaatgtgatgaatggaatccattgtatttatagatgaaactgt |
22881028 |
T |
|
| Q |
478 |
tgtcttcacttgctaccaatgtaacaagcaaacataacataaagacaaactt |
529 |
Q |
| |
|
| ||||||||||||| |||||||||||| ||| | |||||||| |||||||| |
|
|
| T |
22881029 |
tttcttcacttgctatcaatgtaacaagaaaaaacaacataaacacaaactt |
22881080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 349 - 525
Target Start/End: Original strand, 22894274 - 22894450
Alignment:
| Q |
349 |
ttggatagaaagcatgtgcagtatcttgcccgatatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtga |
448 |
Q |
| |
|
||||||||||||||||||| | ||||| | | |||||||||||||||||||||||| | || ||||| | |||||||||||||||||| ||||| || |
|
|
| T |
22894274 |
ttggatagaaagcatgtgctttttcttgtttggtgtcattggtgagtcttagtaagccattggaggttaaattagcaataccatcaagatacaaatgaga |
22894373 |
T |
|
| Q |
449 |
tgattggaatcctttatagatgaaaccgttgtcttcacttgctaccaatgtaacaagcaaacataacataaagacaa |
525 |
Q |
| |
|
||||||||| | ||||||||||||| ||||||||||||| ||||||||||||||| ||| | |||||||| |||| |
|
|
| T |
22894374 |
tgattggaaatcattatagatgaaacttttgtcttcacttggtaccaatgtaacaagaaaaaacaacataaacacaa |
22894450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 382 - 503
Target Start/End: Original strand, 22840415 - 22840542
Alignment:
| Q |
382 |
tatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcc------tttatagatgaaacc |
475 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
22840415 |
tatcattggtgagtcttagtaagccagttgaggctaactcagcggtaccatcaagatataaatttgatgattggaatccattatatttatagatgaaact |
22840514 |
T |
|
| Q |
476 |
gttgtcttcacttgctaccaatgtaaca |
503 |
Q |
| |
|
||||||| ||||||||||||||||||| |
|
|
| T |
22840515 |
gttgtctatacttgctaccaatgtaaca |
22840542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 22914032 - 22914115
Alignment:
| Q |
383 |
atcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcctttata |
466 |
Q |
| |
|
||||||||| | ||||||||| ||| |||| ||||| ||||||| |||||||||||||||||||||||||| ||| || ||||| |
|
|
| T |
22914032 |
atcattggttaatcttagtaaaccatttgaggttaattcagcaacaccatcaagatataaatgtgatgatttgaaaccattata |
22914115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 505
Target Start/End: Original strand, 22873588 - 22873632
Alignment:
| Q |
461 |
tttatagatgaaaccgttgtcttcacttgctaccaatgtaacaag |
505 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
22873588 |
tttatagatgaaactgttgtcttcacttgctactaatgtaacaag |
22873632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 460
Target Start/End: Original strand, 22885937 - 22885968
Alignment:
| Q |
429 |
ccatcaagatataaatgtgatgattggaatcc |
460 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
22885937 |
ccatcaagatataaatgtgatgattggaatcc |
22885968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 149; Significance: 2e-78; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 21150736 - 21151015
Alignment:
| Q |
1 |
tatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaa |
100 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||| ||||||||||| | ||||| || ||| ||||||| ||||||||||||| | |||||| ||| |
|
|
| T |
21150736 |
tatcccttttcagtggatatcctatgcatgtatggattgaatatgatggtgaaaagaagaagattaatgttactttagctccaattagtgttggttttaa |
21150835 |
T |
|
| Q |
101 |
tgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggta |
200 |
Q |
| |
|
| ||||||||| |||||||||||||||| || ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| || |
|
|
| T |
21150836 |
taaa---aaaccagcaagacctttgttatcattgaccaaagatctttctccagttctcaacaatagtatgtatgttggattctcatcttcaacagggtta |
21150932 |
T |
|
| Q |
201 |
attgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctga |
283 |
Q |
| |
|
||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
21150933 |
cttgcagcttctcattatattcttggttggagttttaaggttaatggcctggctcaaaaccttgaaatctctgaacttcctga |
21151015 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 390 - 505
Target Start/End: Complemental strand, 21150343 - 21150228
Alignment:
| Q |
390 |
gtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcctttatagatgaaaccgttgtcttcacttg |
489 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| |
|
|
| T |
21150343 |
gtgagtcttagtaagccatttgaggttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatcttcacttg |
21150244 |
T |
|
| Q |
490 |
ctaccaatgtaacaag |
505 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
21150243 |
ctaccaatgtaacaag |
21150228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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