View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21584_low_11 (Length: 249)

Name: NF21584_low_11
Description: NF21584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21584_low_11
NF21584_low_11
[»] scaffold0234 (2 HSPs)
scaffold0234 (1-203)||(1779-1981)
scaffold0234 (1-203)||(10670-10872)
[»] chr6 (38 HSPs)
chr6 (1-203)||(17690898-17691100)
chr6 (1-203)||(27380710-27380912)
chr6 (1-203)||(27471093-27471295)
chr6 (1-203)||(29309437-29309639)
chr6 (1-203)||(29316396-29316598)
chr6 (1-203)||(27297176-27297378)
chr6 (1-203)||(11652270-11652472)
chr6 (1-203)||(16558930-16559132)
chr6 (4-203)||(17683927-17684126)
chr6 (1-203)||(25536649-25536851)
chr6 (1-203)||(18336202-18336403)
chr6 (10-194)||(10358697-10358879)
chr6 (77-203)||(18019463-18019588)
chr6 (1-172)||(16393944-16394113)
chr6 (10-194)||(22559838-22560022)
chr6 (77-194)||(14075022-14075139)
chr6 (95-203)||(27525196-27525303)
chr6 (40-193)||(19735163-19735316)
chr6 (95-192)||(22859534-22859630)
chr6 (95-203)||(27507982-27508089)
chr6 (104-203)||(16789639-16789738)
chr6 (10-203)||(21995433-21995627)
chr6 (104-203)||(1585743-1585842)
chr6 (106-194)||(28173188-28173276)
chr6 (95-193)||(19734888-19734986)
chr6 (10-169)||(20735997-20736157)
chr6 (109-203)||(33317440-33317534)
chr6 (77-203)||(8613461-8613588)
chr6 (40-163)||(13194478-13194601)
chr6 (46-203)||(13358736-13358890)
chr6 (47-203)||(17849916-17850071)
chr6 (143-203)||(28755705-28755765)
chr6 (46-151)||(28755920-28756025)
chr6 (111-191)||(8510436-8510516)
chr6 (122-192)||(8065280-8065350)
chr6 (49-102)||(2669882-2669934)
chr6 (128-189)||(24465191-24465252)
chr6 (46-141)||(28917928-28918023)
[»] chr4 (60 HSPs)
chr4 (1-203)||(8858714-8858916)
chr4 (1-203)||(18262759-18262961)
chr4 (1-203)||(19926218-19926420)
chr4 (1-203)||(26964187-26964389)
chr4 (1-203)||(55613230-55613432)
chr4 (1-203)||(5714495-5714696)
chr4 (1-203)||(10620791-10620993)
chr4 (1-203)||(18269620-18269822)
chr4 (1-203)||(26971010-26971212)
chr4 (1-203)||(28392592-28392794)
chr4 (1-197)||(10627876-10628072)
chr4 (1-203)||(869144-869346)
chr4 (1-203)||(5707867-5708068)
chr4 (1-203)||(8845750-8845952)
chr4 (6-200)||(10689831-10690025)
chr4 (6-200)||(10903471-10903665)
chr4 (4-203)||(4426073-4426272)
chr4 (6-203)||(10677035-10677238)
chr4 (6-203)||(10890675-10890878)
chr4 (1-203)||(35224107-35224307)
chr4 (1-200)||(5667591-5667789)
chr4 (38-203)||(19373848-19374014)
chr4 (77-203)||(34976094-34976220)
chr4 (95-194)||(26532173-26532271)
chr4 (10-203)||(5616870-5617063)
chr4 (95-203)||(2677573-2677680)
chr4 (10-193)||(9538433-9538617)
chr4 (95-203)||(15815581-15815688)
chr4 (40-193)||(5524634-5524788)
chr4 (39-203)||(24701585-24701751)
chr4 (10-194)||(30040132-30040317)
chr4 (104-203)||(5870985-5871084)
chr4 (104-203)||(15462070-15462169)
chr4 (104-203)||(17299594-17299693)
chr4 (104-203)||(18110678-18110777)
chr4 (38-203)||(19362912-19363078)
chr4 (95-203)||(3368658-3368765)
chr4 (77-203)||(4546604-4546731)
chr4 (104-203)||(4675618-4675717)
chr4 (104-203)||(18163730-18163829)
chr4 (104-203)||(20244505-20244604)
chr4 (115-194)||(28917418-28917497)
chr4 (105-203)||(9488118-9488216)
chr4 (38-203)||(32636986-32637152)
chr4 (105-203)||(1942260-1942358)
chr4 (106-193)||(11421558-11421645)
chr4 (22-203)||(9937456-9937636)
chr4 (78-167)||(36092867-36092956)
chr4 (23-203)||(23055697-23055877)
chr4 (39-159)||(20311872-20311992)
chr4 (92-195)||(469135-469237)
chr4 (208-243)||(8859362-8859397)
chr4 (208-243)||(10620310-10620345)
chr4 (208-243)||(10627392-10627427)
chr4 (208-243)||(10825329-10825364)
chr4 (208-243)||(55613878-55613913)
chr4 (41-99)||(27031344-27031402)
chr4 (30-99)||(43707115-43707183)
chr4 (8-68)||(22805636-22805696)
chr4 (150-194)||(24699722-24699766)
[»] chr3 (47 HSPs)
chr3 (1-203)||(10572050-10572252)
chr3 (1-203)||(10578814-10579016)
chr3 (1-203)||(6110611-6110813)
chr3 (1-203)||(16481941-16482143)
chr3 (1-199)||(13211849-13212047)
chr3 (1-203)||(13517354-13517556)
chr3 (1-203)||(15600342-15600544)
chr3 (1-203)||(15606887-15607089)
chr3 (1-203)||(8491042-8491244)
chr3 (1-202)||(15357045-15357246)
chr3 (1-203)||(17780576-17780778)
chr3 (1-202)||(15341678-15341879)
chr3 (1-203)||(1646979-1647181)
chr3 (1-190)||(18520522-18520711)
chr3 (1-203)||(17136900-17137102)
chr3 (6-203)||(23014818-23015014)
chr3 (32-203)||(17197213-17197383)
chr3 (1-136)||(13249154-13249289)
chr3 (77-203)||(15846170-15846295)
chr3 (38-203)||(15538038-15538204)
chr3 (77-203)||(21034781-21034906)
chr3 (70-203)||(21399328-21399460)
chr3 (39-203)||(25800863-25801028)
chr3 (1-101)||(32056458-32056559)
chr3 (95-203)||(28088666-28088774)
chr3 (40-203)||(9504893-9505055)
chr3 (104-203)||(12300478-12300577)
chr3 (5-88)||(18523213-18523296)
chr3 (45-203)||(26816801-26816960)
chr3 (95-192)||(20147200-20147296)
chr3 (5-167)||(29925522-29925683)
chr3 (5-167)||(29974676-29974837)
chr3 (104-203)||(55427589-55427688)
chr3 (77-194)||(11788129-11788247)
chr3 (105-203)||(15316809-15316907)
chr3 (105-194)||(14147590-14147679)
chr3 (110-203)||(25978361-25978454)
chr3 (10-141)||(16241026-16241157)
chr3 (7-203)||(35199103-35199298)
chr3 (208-243)||(10571568-10571603)
chr3 (208-243)||(15599886-15599921)
chr3 (208-243)||(15606431-15606466)
chr3 (208-243)||(16481460-16481495)
chr3 (1-36)||(17199809-17199844)
chr3 (208-243)||(18538165-18538200)
chr3 (171-203)||(29925697-29925729)
chr3 (171-203)||(29974851-29974883)
[»] chr2 (23 HSPs)
chr2 (1-203)||(21329706-21329908)
chr2 (1-203)||(22791316-22791518)
chr2 (1-193)||(18797053-18797245)
chr2 (5-203)||(41661823-41662021)
chr2 (39-203)||(36270745-36270908)
chr2 (1-203)||(18620350-18620549)
chr2 (95-203)||(24249667-24249774)
chr2 (77-203)||(29801013-29801140)
chr2 (10-203)||(15341635-15341829)
chr2 (95-203)||(30174937-30175044)
chr2 (10-192)||(19616909-19617092)
chr2 (40-193)||(22182960-22183110)
chr2 (77-203)||(24228848-24228974)
chr2 (12-190)||(6991590-6991762)
chr2 (105-203)||(20687048-20687146)
chr2 (25-194)||(31847947-31848115)
chr2 (10-203)||(24763305-24763499)
chr2 (117-203)||(12298416-12298502)
chr2 (7-83)||(17241262-17241338)
chr2 (10-138)||(41315554-41315683)
chr2 (28-112)||(23662022-23662105)
chr2 (77-141)||(39338187-39338251)
chr2 (151-193)||(41332825-41332867)
[»] chr1 (33 HSPs)
chr1 (1-203)||(18252577-18252779)
chr1 (1-203)||(18531972-18532174)
chr1 (5-203)||(27310035-27310233)
chr1 (1-203)||(27130868-27131070)
chr1 (1-203)||(16358493-16358695)
chr1 (1-203)||(27277018-27277218)
chr1 (40-203)||(36816093-36816257)
chr1 (8-194)||(31234391-31234575)
chr1 (1-201)||(22641342-22641534)
chr1 (77-203)||(28134357-28134482)
chr1 (4-202)||(12006007-12006202)
chr1 (77-203)||(19706073-19706198)
chr1 (85-194)||(47667128-47667236)
chr1 (95-203)||(9456676-9456783)
chr1 (95-203)||(9460772-9460879)
chr1 (95-203)||(20779280-20779387)
chr1 (95-192)||(22669903-22669999)
chr1 (95-192)||(42816635-42816731)
chr1 (95-187)||(22613053-22613144)
chr1 (104-203)||(33283491-33283590)
chr1 (1-83)||(3855497-3855579)
chr1 (8-192)||(23507454-23507636)
chr1 (95-203)||(20390874-20390981)
chr1 (104-203)||(14482458-14482557)
chr1 (77-190)||(634480-634594)
chr1 (109-203)||(8728237-8728331)
chr1 (77-194)||(43802008-43802124)
chr1 (40-194)||(9916247-9916401)
chr1 (61-194)||(35132464-35132597)
chr1 (4-194)||(12013762-12013943)
chr1 (119-203)||(10852062-10852146)
chr1 (135-203)||(35935924-35935992)
chr1 (8-80)||(24301466-24301538)
[»] scaffold0390 (3 HSPs)
scaffold0390 (4-203)||(6392-6591)
scaffold0390 (1-203)||(13408-13610)
scaffold0390 (208-243)||(5911-5946)
[»] chr8 (33 HSPs)
chr8 (1-203)||(6094670-6094872)
chr8 (1-203)||(21941212-21941414)
chr8 (1-203)||(15326745-15326947)
chr8 (1-203)||(15507114-15507316)
chr8 (1-193)||(28548594-28548786)
chr8 (1-203)||(24643195-24643396)
chr8 (5-161)||(22172037-22172193)
chr8 (5-203)||(24796463-24796658)
chr8 (77-203)||(26241027-26241153)
chr8 (95-192)||(25611756-25611852)
chr8 (107-203)||(8370887-8370983)
chr8 (95-203)||(27007152-27007259)
chr8 (95-203)||(27014295-27014402)
chr8 (77-203)||(21969876-21970001)
chr8 (77-203)||(22659128-22659254)
chr8 (70-203)||(22130244-22130376)
chr8 (95-192)||(27880133-27880229)
chr8 (95-192)||(28020314-28020410)
chr8 (9-150)||(8967813-8967956)
chr8 (8-191)||(14978953-14979133)
chr8 (77-203)||(6431428-6431555)
chr8 (95-193)||(21917236-21917333)
chr8 (38-193)||(8781518-8781674)
chr8 (104-203)||(45533908-45534007)
chr8 (77-194)||(18835887-18836005)
chr8 (38-166)||(20534880-20535009)
chr8 (77-203)||(2962565-2962692)
chr8 (46-193)||(32872318-32872465)
chr8 (40-186)||(2375622-2375767)
chr8 (9-125)||(17083728-17083842)
chr8 (12-144)||(27098688-27098821)
chr8 (208-243)||(21941837-21941872)
chr8 (38-101)||(29645894-29645957)
[»] chr7 (44 HSPs)
chr7 (1-203)||(15152990-15153192)
chr7 (1-203)||(29328331-29328533)
chr7 (1-203)||(12751373-12751575)
chr7 (1-203)||(11542438-11542640)
chr7 (1-203)||(11535520-11535722)
chr7 (1-203)||(18561545-18561747)
chr7 (1-203)||(12739083-12739283)
chr7 (1-203)||(13392697-13392898)
chr7 (82-203)||(24851017-24851138)
chr7 (41-183)||(11546418-11546560)
chr7 (77-203)||(8465542-8465667)
chr7 (38-203)||(24443011-24443177)
chr7 (23-203)||(15168928-15169109)
chr7 (10-203)||(18257199-18257393)
chr7 (70-203)||(18400639-18400771)
chr7 (70-203)||(18407623-18407755)
chr7 (95-203)||(48808131-48808238)
chr7 (70-203)||(47166493-47166627)
chr7 (95-203)||(18138973-18139080)
chr7 (95-203)||(30254698-30254805)
chr7 (10-203)||(25845156-25845351)
chr7 (105-203)||(18258757-18258855)
chr7 (77-203)||(41680602-41680728)
chr7 (95-192)||(2205112-2205208)
chr7 (70-203)||(19231423-19231556)
chr7 (104-203)||(15730319-15730418)
chr7 (38-203)||(19393061-19393226)
chr7 (40-194)||(7396794-7396948)
chr7 (105-203)||(34129144-34129242)
chr7 (77-203)||(12393171-12393297)
chr7 (10-203)||(28131036-28131230)
chr7 (10-203)||(19389034-19389229)
chr7 (68-143)||(5982399-5982475)
chr7 (45-194)||(39112386-39112536)
chr7 (77-183)||(10668558-10668661)
chr7 (151-203)||(12410113-12410165)
chr7 (10-189)||(16011916-16012096)
chr7 (9-203)||(47833426-47833621)
chr7 (52-149)||(31190093-31190191)
chr7 (71-203)||(23387718-23387850)
chr7 (146-194)||(31190014-31190062)
chr7 (208-243)||(2652990-2653025)
chr7 (105-203)||(14592463-14592561)
chr7 (25-134)||(26146890-26146997)
[»] chr5 (31 HSPs)
chr5 (1-203)||(24701680-24701882)
chr5 (1-203)||(24694916-24695118)
chr5 (1-203)||(19713956-19714158)
chr5 (1-203)||(19706677-19706879)
chr5 (1-203)||(18567958-18568158)
chr5 (40-203)||(39539134-39539297)
chr5 (77-203)||(25805019-25805144)
chr5 (39-203)||(17298362-17298525)
chr5 (2-184)||(28719234-28719414)
chr5 (77-194)||(20941570-20941686)
chr5 (39-203)||(17282916-17283080)
chr5 (77-203)||(22941794-22941919)
chr5 (38-194)||(39535694-39535851)
chr5 (95-203)||(23546482-23546589)
chr5 (95-193)||(32459-32556)
chr5 (77-203)||(12764623-12764750)
chr5 (105-203)||(5098219-5098317)
chr5 (77-203)||(31097358-31097484)
chr5 (10-182)||(26245576-26245749)
chr5 (77-203)||(9811366-9811493)
chr5 (104-203)||(12789298-12789397)
chr5 (104-203)||(24932941-24933040)
chr5 (10-191)||(31651425-31651608)
chr5 (109-203)||(17314439-17314533)
chr5 (40-159)||(20099922-20100041)
chr5 (77-203)||(7865063-7865190)
chr5 (105-194)||(22546763-22546852)
chr5 (109-200)||(33476767-33476858)
chr5 (40-194)||(18829030-18829185)
chr5 (208-243)||(24694462-24694497)
chr5 (208-243)||(24701231-24701266)
[»] scaffold0433 (1 HSPs)
scaffold0433 (5-203)||(7658-7856)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-203)||(18834-19036)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-203)||(229849-230051)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-203)||(6069-6271)
[»] scaffold0186 (1 HSPs)
scaffold0186 (1-170)||(25481-25650)
[»] scaffold0061 (2 HSPs)
scaffold0061 (105-203)||(5679-5777)
scaffold0061 (105-203)||(168-266)
[»] scaffold0389 (1 HSPs)
scaffold0389 (77-203)||(705-830)
[»] scaffold0112 (1 HSPs)
scaffold0112 (77-203)||(726-851)
[»] scaffold0028 (1 HSPs)
scaffold0028 (70-203)||(120265-120397)
[»] scaffold0466 (1 HSPs)
scaffold0466 (38-203)||(12583-12749)
[»] scaffold0264 (1 HSPs)
scaffold0264 (104-203)||(3310-3409)
[»] scaffold0006 (1 HSPs)
scaffold0006 (105-203)||(67042-67140)
[»] scaffold0031 (1 HSPs)
scaffold0031 (10-194)||(39630-39816)
[»] scaffold0160 (1 HSPs)
scaffold0160 (39-193)||(24358-24511)
[»] scaffold0111 (1 HSPs)
scaffold0111 (38-194)||(27044-27201)
[»] scaffold0086 (1 HSPs)
scaffold0086 (105-194)||(54333-54422)
[»] scaffold0034 (1 HSPs)
scaffold0034 (46-167)||(81476-81597)
[»] scaffold0023 (1 HSPs)
scaffold0023 (105-191)||(108769-108855)
[»] scaffold0203 (1 HSPs)
scaffold0203 (208-243)||(29186-29221)
[»] scaffold0099 (1 HSPs)
scaffold0099 (96-174)||(9701-9784)
[»] scaffold0496 (1 HSPs)
scaffold0496 (75-145)||(11798-11868)
[»] scaffold0686 (1 HSPs)
scaffold0686 (163-203)||(8148-8188)
[»] scaffold0375 (1 HSPs)
scaffold0375 (76-143)||(15731-15799)


Alignment Details
Target: scaffold0234 (Bit Score: 191; Significance: 1e-104; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 1981 - 1779
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  1981 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 1882  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1881 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 1782  T
Q  201 taa 203  Q
    |||    
T  1781 taa 1779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10872 - 10670
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  10872 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 10773  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10772 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 10673  T
Q  201 taa 203  Q
    |||    
T  10672 taa 10670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 17691100 - 17690898
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  17691100 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 17691001  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691000 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 17690901  T
Q  201 taa 203  Q
    |||    
T  17690900 taa 17690898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 27380912 - 27380710
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  27380912 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 27380813  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27380812 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 27380713  T
Q  201 taa 203  Q
    |||    
T  27380712 taa 27380710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 27471295 - 27471093
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  27471295 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 27471196  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471195 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 27471096  T
Q  201 taa 203  Q
    |||    
T  27471095 taa 27471093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 29309437 - 29309639
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  29309437 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 29309536  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29309537 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 29309636  T
Q  201 taa 203  Q
    |||    
T  29309637 taa 29309639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 29316396 - 29316598
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  29316396 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 29316495  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29316496 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 29316595  T
Q  201 taa 203  Q
    |||    
T  29316596 taa 29316598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27297176 - 27297378
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  27297176 tacgggcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 27297275  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27297276 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatttgtgatt 27297375  T
Q  201 taa 203  Q
    |||    
T  27297376 taa 27297378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11652270 - 11652472
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||||||     
T  11652270 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagagcaaaagggtaattatacacataatcattatt 11652369  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11652370 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 11652469  T
Q  201 taa 203  Q
    |||    
T  11652470 taa 11652472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16559132 - 16558930
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  16559132 tacgggcccaatattgaactaaacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 16559033  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16559032 acagaaagatttcgtcagatcacatgacattctcgtcacttgggtaacagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 16558933  T
Q  201 taa 203  Q
    |||    
T  16558932 taa 16558930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 17684126 - 17683927
Alignment:
Q  4 gggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcata 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||| |||||||| |    
T  17684126 gggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacataagggcaaaagggtaattatacaaatgaacattatcaca 17684027  T
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17684026 gaaaagtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttatagtattaaatatgtgatttaa 17683927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 25536851 - 25536649
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||    
T  25536851 tacgtgcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaaagataattatacacatgatcattatc 25536752  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||| |||||||||||||||||||| ||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  25536751 acagaaaggtttcgtcatatcacatgacattctcgtcagttgggttacagtgatgtgttactagataccgctcactgtttatagtattaaatatgtgatt 25536652  T
Q  201 taa 203  Q
    |||    
T  25536651 taa 25536649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18336202 - 18336403
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||||| || | ||||||||||| ||||||||||| | || ||||||    
T  18336202 tacgagcccaatattgaactagacaaggatgacaaagtctatgctttgtgttcaatatagacgtaagggcaaaaggttaattatacacataataattatc 18336301  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18336302 acagaaaggtttctt-agttcacatgacattctcgtcacttgggtagcagtgatgtgttgctagatacctctcactgtttataatattaaatatgtgatt 18336400  T
Q  201 taa 203  Q
    |||    
T  18336401 taa 18336403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 10358879 - 10358697
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-g 108  Q
    |||||||| ||| |||||| |||||   ||||||| |||||||||||||| | |||| | ||||||   |||| ||||| ||| ||||||||| |||| |    
T  10358879 aatattgatctatacaagggtgacaaaatctatgcattgtgttcaatatagatatgatgacaaaag---aattgtacacatgaacattatcatggaaaag 10358783  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    ||||||||||||||| || |||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  10358782 gtttcgtcagatcacttggcattcttgtcacttggatagcagtgatttgttgctagataccgttcactgtttataatattaaatat 10358697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 18019588 - 18019463
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  18019588 gtaattgtacacatgaatattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 18019490  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  18019489 gtttataatattaaatatcagatttaa 18019463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 16394113 - 16393944
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||| |||||||||||||| ||||| | ||||| |  | | | |||||||| |||||| | ||||||| |||||||||||||||||| ||| |||| ||    
T  16394113 tacggacccaatattgaactggacaaaggtgacatg--ccacgtcttgtgtttaatatagaaatgagggaaaaagggtaattatacacatgaacattgtc 16394016  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgct 172  Q
    | |  ||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  16394015 acaataaggtttcgtcagattacatgacattctcgtcacttgggtagcagtattgtgttgctagataccgct 16393944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 22560022 - 22559838
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaagg 109  Q
    |||||||| ||| |||||| |||||   ||| ||||||||| |||| ||| |||||||| ||||   |||||| ||||| |||  ||||||||  |||||    
T  22560022 aatattgatctatacaagggtgacaaaatctttgccttgtgatcaacataaacatgaggacaaagaagtaattgtacacatgaatattatcatgaaaagg 22559923  T
Q  110 tttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||||||||  ||||||||| ||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||||||    
T  22559922 tttcgtcagatcatgtgacattcttgtcacttgggtagcaatgatgtgtttttagataccgctcattgtttataatattaaatat 22559838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 14075022 - 14075139
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||| |    
T  14075022 gtaattgtacacatgagtattatcatggaaaggtttcgtcagatcacttgacattcttgtcacttgggaagcaatgatgtgttgctagataccgctcatt 14075121  T
Q  177 gtttataatattaaatat 194  Q
    ||||||| ||||||||||    
T  14075122 gtttatagtattaaatat 14075139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 27525303 - 27525196
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||    
T  27525303 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctaattgtttataatattaaatat 27525205  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  27525204 tagatttaa 27525196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 19735316 - 19735163
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcac 139  Q
    ||||||||||| |||||||||| | |||  |||| | |||||| ||||| |||  ||||||||| ||| |||| |||| ||||| ||||||||| |||||    
T  19735316 tatgccttgtgatcaatatatatacgagtacaaaggagtaattgtacacatgagtattatcataaaaatgttttgtcaaatcacttgacattcttgtcac 19735217  T
Q  140 ttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    |||||||||| |||| |||||||||| |||||||| ||||||||||||||||||    
T  19735216 ttgggtagcaatgatatgttgctagacaccgctcattgtttataatattaaata 19735163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 22859630 - 22859534
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  22859630 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaat 22859534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 27508089 - 27507982
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||    
T  27508089 attatcat-gaaaggtttcgtcggatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctaattgtttataatattaaatat 27507991  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  27507990 tagatttaa 27507982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 16789639 - 16789738
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||  |||||||    
T  16789639 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattaaatattagatttaa 16789738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 21995433 - 21995627
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatag-aaag 108  Q
    |||||||| ||| |||||| |||||   ||||||||||||| |||||||| | |||||| |||||| ||||||  |||| |||   |||| || | ||||    
T  21995433 aatattgacctatacaagggtgacaaaatctatgccttgtgatcaatatagatatgaggacaaaagagtaattgaacacatgaatgttatgatggaaaag 21995532  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||| |||||||||| | ||||||| ||||||||| ||||| |||||| ||||||||||||||||| |||||||||| ||||||||  |||||||    
T  21995533 gttttgtcagatcacttaacattcttgtcacttggatagcaatgatgtattgctagataccgctcattgtttataattttaaatattagatttaa 21995627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 1585842 - 1585743
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| ||||  |||||||    
T  1585842 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattagatattagatttaa 1585743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 28173188 - 28173276
Alignment:
Q  106 aaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||||| |||||   ||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  28173188 aaggtttcgtgagatcgattgacattcttgtcacttgggtagcagtgatgtgtggctagataccgctcactgttcataatattaaatat 28173276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 19734986 - 19734888
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    ||||||||| ||| |||| |||| ||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||||| ||||||||||||||||||    
T  19734986 attatcataaaaatgttttgtcaaatcacttgacattcttgtcacttgggtagcaatgatatgttgctagacaccgctcattgtttataatattaaata 19734888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 20736157 - 20735997
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-g 108  Q
    |||||||| ||| ||||||||||||   ||||||||||||| | |||||| | || | | |||| |  ||||| ||||| |||  |||||||| |||| |    
T  20736157 aatattgatctatacaaggatgacaaaatctatgccttgtgataaatatagatattatgacaaaggaataattgtacacatgaatattatcatggaaaag 20736058  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagatacc 169  Q
    ||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||    
T  20736057 gtttcgtcagatcacttgacattcttgtcacttggatagcaatgatgtgttgctagatacc 20735997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 33317440 - 33317534
Alignment:
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||||||||||||| | |||||| || |||||||  |||||||    
T  33317440 gtttcgtcagatcacttgacatttttgtcacttgggtagcaatgatgtgttgctagataccgctcattatttatagtaataaatattagatttaa 33317534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 8613461 - 8613588
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaag-gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| | || |||||||| ||||  ||||||||||||||| ||||||||| ||||||||||||||| |||||||||| |||||| ||||||     
T  8613461 gtaattgtacacataattattatcatggaaaatgtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgttagatatcgctcat 8613560  T
Q  176 tgtttataatattaaatatgtgatttaa 203  Q
    | |||||| || |||||||  |||||||    
T  8613561 tatttatagtaataaatattagatttaa 8613588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 13194478 - 13194601
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcac 139  Q
    |||||||||||||||| |||   |||||  |||||||||||||||||||   |||||||||| |||||| ||| |||| ||||||||||||||  ||| |    
T  13194478 tatgccttgtgttcaaaataagtatgagaccaaaagggtaattatacacaacatcattatcacagaaagatttagtcatatcacatgacattcctgtctc 13194577  T
Q  140 ttgggtagcagtgatgtgttgcta 163  Q
    |||| |||||||||||| ||||||    
T  13194578 ttggatagcagtgatgtattgcta 13194601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 13358890 - 13358736
Alignment:
Q  46 ttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggt 145  Q
    |||||||||||||| |||||| | |||||| ||||| |||||||| ||  |||| || ||||| ||| ||| ||||||||||||||||  | ||| ||      
T  13358890 ttgtgttcaatatagacatgaagacaaaagagtaatgatacacgtaattgttattatggaaagcttt-gtcggatcacatgacattcttatgactagg-- 13358794  T
Q  146 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||| | ||||||||||||||| ||||||||||| ||| ||| |||||||| ||||||    
T  13358793 agcaataatgtgttgctagatatcgctcactgttaatagtatcaaatatgtaatttaa 13358736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 203
Target Start/End: Complemental strand, 17850071 - 17849916
Alignment:
Q  47 tgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggta 146  Q
    ||||||||||||| |||||||   ||||||||||| |||||| | |||||||||| | ||| ||||| ||| || |||||| |||||||| |||||   |    
T  17850071 tgtgttcaatatagacatgagcaaaaaagggtaatcatacacataatcattatcacataaatgtttcatcaaattacatgaaattctcgttacttgtaaa 17849972  T
Q  147 gcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||  ||| ||| |  |||||| |||||||||| ||| | ||||||||    
T  17849971 gcagtgatgtgtaactaaata-ctatcactggttataatatttaatgtatgatttaa 17849916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 28755765 - 28755705
Alignment:
Q  143 ggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||  |||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  28755765 ggtagcagtattgtgttgctatacaccgctcactgtttataatattaaatatgtaatttaa 28755705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 28756025 - 28755920
Alignment:
Q  46 ttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggt 145  Q
    |||| ||||||||| |||||| ||||||| ||||||| ||| |  ||||||||||| | |||||||||| || || |||||| ||| | ||||| |||||    
T  28756025 ttgtcttcaatataaacatgaaggcaaaatggtaattgtacgcaagatcattatcacataaaggtttcgccatattacatgatatttttgtcacctgggt 28755926  T
Q  146 agcagt 151  Q
    ||||||    
T  28755925 agcagt 28755920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 8510436 - 8510516
Alignment:
Q  111 ttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaa 191  Q
    ||||||||||||||||||||| | | | |||||||  |||||||||||| |||||||   |||| ||||||||||||||||    
T  8510436 ttcgtcagatcacatgacattattgccccttgggtgacagtgatgtgttcctagatattactcattgtttataatattaaa 8510516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 8065350 - 8065280
Alignment:
Q  122 acatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    |||||||||||||||||||||| |||||||||||||||  |  |||  ||||| ||||||||| |||||||    
T  8065350 acatgacattctcgtcacttggttagcagtgatgtgttattgtatattgctcattgtttataaaattaaat 8065280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 2669882 - 2669934
Alignment:
Q  49 tgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcat 102  Q
    ||||||||| ||||||||||||||||||||||||| |||| | |||||||||||    
T  2669882 tgttcaataaatacatgagggcaaaagggtaattacacacat-atcattatcat 2669934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 24465252 - 24465191
Alignment:
Q  128 cattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatatta 189  Q
    |||||| |||||| ||||| |||||||| ||||||||||||  |||| ||||||||||||||    
T  24465252 cattcttgtcactagggtaacagtgatgagttgctagatactactcattgtttataatatta 24465191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 141
Target Start/End: Original strand, 28917928 - 28918023
Alignment:
Q  46 ttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcactt 141  Q
    |||||||||||||| | || ||| |||  |||| ||||||||| |||||||||| | | |||| |||||||| ||||||| ||||| | |||||||    
T  28917928 ttgtgttcaatatagatataaggacaatggggtgattatacacatgatcattattacataaagatttcgtcatatcacataacatttttgtcactt 28918023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 8858714 - 8858916
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8858714 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 8858813  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858814 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 8858913  T
Q  201 taa 203  Q
    |||    
T  8858914 taa 8858916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18262759 - 18262961
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18262759 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 18262858  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262859 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 18262958  T
Q  201 taa 203  Q
    |||    
T  18262959 taa 18262961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19926420 - 19926218
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  19926420 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 19926321  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926320 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 19926221  T
Q  201 taa 203  Q
    |||    
T  19926220 taa 19926218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 26964187 - 26964389
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  26964187 tacgggcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 26964286  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26964287 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 26964386  T
Q  201 taa 203  Q
    |||    
T  26964387 taa 26964389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 55613230 - 55613432
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  55613230 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 55613329  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  55613330 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgcttgataccgctcactgtttataatattaaatatgtgatt 55613429  T
Q  201 taa 203  Q
    |||    
T  55613430 taa 55613432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 5714495 - 5714696
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  5714495 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 5714594  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714595 aaagaa-ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 5714693  T
Q  201 taa 203  Q
    |||    
T  5714694 taa 5714696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10620993 - 10620791
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  10620993 tacgggcccaatattgaactagacaaggatgacacggtctatgccttatgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 10620894  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10620893 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagttaccgctcactgtttataatattaaatatgtgatt 10620794  T
Q  201 taa 203  Q
    |||    
T  10620793 taa 10620791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18269620 - 18269822
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18269620 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 18269719  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18269720 acagaaaggtttcgtcagatcacctgacattctcgtcacttgggtagcagtgatgtgatgctagataccgctcactgtttataatattaaatatgtgatt 18269819  T
Q  201 taa 203  Q
    |||    
T  18269820 taa 18269822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 26971010 - 26971212
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  26971010 tacgggcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 26971109  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26971110 acagaaaggtttcgtcagatcacataacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 26971209  T
Q  201 taa 203  Q
    |||    
T  26971210 taa 26971212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 28392794 - 28392592
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  28392794 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 28392695  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28392694 acagaaaggtttcatcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgttcactgtttataatattaaatatgtgatt 28392595  T
Q  201 taa 203  Q
    |||    
T  28392594 taa 28392592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 10628072 - 10627876
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  10628072 tacgggcccaatattgaactagacaaggatgacacggtctatgccttatgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 10627973  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtg 197  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10627972 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtg 10627876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 869144 - 869346
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  869144 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagagtaattatacacatgatcattatc 869243  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  869244 acagaaaggtttcgttagatcgcatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 869343  T
Q  201 taa 203  Q
    |||    
T  869344 taa 869346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 5707867 - 5708068
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  5707867 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 5707966  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5707967 aaag-aaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatatgttgctagataccgctcactgtttataatattaaatatgtgatt 5708065  T
Q  201 taa 203  Q
    |||    
T  5708066 taa 5708068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 8845750 - 8845952
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||    
T  8845750 tacgtgcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatatacatgatcattatc 8845849  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  8845850 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagtagtgatgtgttgctagataccactcactgtttataatattaaatatgttatt 8845949  T
Q  201 taa 203  Q
    |||    
T  8845950 taa 8845952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 10689831 - 10690025
Alignment:
Q  6 gcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcataga 105  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||  ||||  |||||||||||| ||||||||||||   |    
T  10689831 gcccaatattgaactagacaaggatgacacggtctatgcattgtgttcaatatagatatgaggataaaatagtaattatacacatgatcattatcacgaa 10689930  T
Q  106 aaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10689931 aaggttttgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 10690025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 10903471 - 10903665
Alignment:
Q  6 gcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcataga 105  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||  ||||  |||||||||||| ||||||||||||   |    
T  10903471 gcccaatattgaactagacaaggatgacacggtctatgcattgtgttcaatatagatatgaggataaaatagtaattatacacatgatcattatcacgaa 10903570  T
Q  106 aaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10903571 aaggttttgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 10903665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 4426272 - 4426073
Alignment:
Q  4 gggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcata 103  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||| |||| ||||||||| |||||||||||||||||| |||| ||||||| |    
T  4426272 gggcccaatattgaactagacaaggatgacacaatatatgccttgtgttcagtatagacatgagggaaaaagggtaattatacacatgattattatcaca 4426173  T
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||  |||| ||||||||||||||||||||||||||||    
T  4426172 gaaaggtttcgtcagatcacatgacattctcgtcacttaggtagtagtgatgtgttgttagatactactcattgtttataatattaaatatgtgatttaa 4426073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 203
Target Start/End: Complemental strand, 10677238 - 10677035
Alignment:
Q  6 gcccaatattgaactagacaaggatgacacggtc------tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattat 99  Q
    ||||||||||||||||||||||||||||||||||      ||||| |||||||||||||| | |||||| |||| | |||||||||||| ||||||||||    
T  10677238 gcccaatattgaactagacaaggatgacacggtcactgtctatgcattgtgttcaatatagatatgaggacaaatgagtaattatacacatgatcattat 10677139  T
Q  100 catagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgat 199  Q
    ||   |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10677138 cacgaaaaggttttgtcagatcacatgacattcttgtcacttggatagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgat 10677039  T
Q  200 ttaa 203  Q
    ||||    
T  10677038 ttaa 10677035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 203
Target Start/End: Complemental strand, 10890878 - 10890675
Alignment:
Q  6 gcccaatattgaactagacaaggatgacacggtc------tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattat 99  Q
    ||||||||||||||||||||||||||||||||||      ||||| |||||||||||||| | |||||| |||| | |||||||||||| ||||||||||    
T  10890878 gcccaatattgaactagacaaggatgacacggtcactgtctatgcattgtgttcaatatagatatgaggacaaatgagtaattatacacatgatcattat 10890779  T
Q  100 catagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgat 199  Q
    ||   |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10890778 cacgaaaaggttttgtcagatcacatgacattcttgtcacttggatagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgat 10890679  T
Q  200 ttaa 203  Q
    ||||    
T  10890678 ttaa 10890675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 35224107 - 35224307
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||||||||||||||||| |||||    |||||| | |||||||||||| |||||||||||| ||| ||| ||||||| |||||||||||    
T  35224107 tacgggcccaatattgaactagacaagggtgacata--ctatgcatcgtgttcaatataaacatgagggcaataggataactatacacatgatcattatc 35224204  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    |  |||| ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35224205 acggaaaagtttcatcagatcacgtgtcattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 35224304  T
Q  201 taa 203  Q
    |||    
T  35224305 taa 35224307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5667789 - 5667591
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||||||||| || |||| ||||| | |  ||||||||||||||||||| |||| ||||||||| |||||||||| ||   | |||||||    
T  5667789 tacgggcccaatattgaacttgagaagggtgacatgtt--atgccttgtgttcaatatagacattagggcaaaaaggtaattataaacacaaacattatc 5667692  T
Q  101 atagaaa-ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgat 199  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5667691 acagaaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctaggtaccgctcactgtttataatattaaatatgtgat 5667592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 19373848 - 19374014
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgt 136  Q
    ||||||||||||| |||||||| | |||||| || | | | |||| ||||| ||| ||||||||| |||| |||||||| ||| ||| ||||||||| ||    
T  19373848 tctatgccttgtgatcaatatagatatgaggacataggaggaattgtacacatgaacattatcatggaaaaggtttcgttagagcacttgacattcttgt 19373947  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||    
T  19373948 cacttgggtagcagtgatgtgttgctagatatcgctcactatttataatattaaatataggatttaa 19374014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 34976094 - 34976220
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||||| |    
T  34976094 gtaattgtacacatgagtattatcatggaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgttagataccgctcatt 34976193  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  34976194 gtttataatattaaatattagatttaa 34976220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 26532173 - 26532271
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26532173 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttataatattaaatat 26532271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 5616870 - 5617063
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-g 108  Q
    |||||||| ||| ||||||||| ||   |||||| |||||| |||||||| |||||||| |||| | |||||| ||||| ||| ||||||||| |||| |    
T  5616870 aatattgatctatacaaggatgccaaaatctatgtcttgtgatcaatatagacatgaggacaaaggagtaattgtacacatgaacattatcatggaaaag 5616969  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||   |||||||||| | ||||||| ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||  |||||||    
T  5616970 gtagtgtcagatcactttacattcttgtcacttgggtagcagtgatgtgttgctagata-caatcactgtttataatattaaatataagatttaa 5617063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 2677573 - 2677680
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  2677573 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagccatgatgtgttgctagataccgctcattgtttataatattaaatat 2677671  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  2677672 tagatttaa 2677680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 9538433 - 9538617
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-g 108  Q
    |||||||| ||| |||||| |||||   ||||||||||||| |||||||| | ||||||  ||| | |||||  ||||| ||| ||||||||| |||| |    
T  9538433 aatattgatctatacaagggtgacaaaatctatgccttgtgatcaatatagatatgaggagaaatgagtaatcgtacacatgaacattatcatggaaaag 9538532  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    ||||||||||||||  |||| |||| ||||||||| || ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  9538533 gtttcgtcagatcagttgacgttcttgtcacttggataacagtgatctgttgctagataccgctcattgtttataatattaaata 9538617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 15815581 - 15815688
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  15815581 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaatat 15815679  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  15815680 tagatttaa 15815688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 5524788 - 5524634
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtca 138  Q
    ||||| |||||||||||||| | |||||| |||| | |||||||||||| ||| |||| |||| |||| |||||||||||||||| ||| ||||  ||||    
T  5524788 tatgcattgtgttcaatatagatatgaggacaaatgagtaattatacacatgaacattgtcatggaaaaggtttcgtcagatcacttgaaattcctgtca 5524689  T
Q  139 cttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    ||||| ||  ||||||||||| |||||||||||||||| ||||||||||||||||    
T  5524688 cttggataagagtgatgtgttactagataccgctcactatttataatattaaata 5524634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 203
Target Start/End: Original strand, 24701585 - 24701751
Alignment:
Q  39 ctatgccttgtgttcaatatatacatgagggc-aaaagggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgt 136  Q
    ||||| ||||||||||| | | ||||||| |  |||| |||||| ||||||  ||||||||| | ||||| |||||| ||||||||||||||||| | ||    
T  24701585 ctatgtcttgtgttcaacacaaacatgagagataaaatggtaatcatacacaagatcattattacagaaaaggtttcttcagatcacatgacatttttgt 24701684  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||    
T  24701685 cacttggatagcagtgatgtgttgttagataccactcactgtttataatattaaatgtttgatttaa 24701751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 30040317 - 30040132
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag- 108  Q
    |||||||| ||| |||||| |||||   ||||||||||||| |||||||| | || ||| |||| | |||||| ||||| | |  |||||||| ||||      
T  30040317 aatattgatctatacaagggtgacaatatctatgccttgtgatcaatatagatattaggacaaaggagtaattgtacacataaatattatcatggaaaaa 30040218  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    ||||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||| |||| |||||||| ||||||||||    
T  30040217 gtttcgtcagatcacttgacattcttgtcacttggatagcaatgatgtgttgctagataccactcattgtttatagtattaaatat 30040132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 5870985 - 5871084
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||  |||||||    
T  5870985 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattaaatattagatttaa 5871084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 15462070 - 15462169
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||| ||||||||| ||||||| | ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  15462070 gaaaggtttcatcagatcacttgacatttttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttataatattaaatatcagatttaa 15462169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 17299693 - 17299594
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||  |||||||    
T  17299693 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattaaatattagatttaa 17299594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 18110777 - 18110678
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||  |||||||    
T  18110777 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattaaatattagatttaa 18110678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 19362912 - 19363078
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaagg-tttcgtcagatcacatgacattctcgt 136  Q
    |||||| |||||| |||||||| | || ||| |||| | |||||| ||||| ||| ||||||||| |||| | |||||| ||| ||| ||||||||| ||    
T  19362912 tctatgtcttgtgatcaatatagatataaggacaaatgagtaattgtacacatgaacattatcatggaaaagatttcgttagagcacttgacattcttgt 19363011  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
     |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||    
T  19363012 aacttggatagcagtgatgtgttgctagataccgctcactatttataatgttaaatattagatttaa 19363078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 3368765 - 3368658
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||| |||||||  ||||||||||    
T  3368765 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgcgttgctagataccgctcattgtttatggtattaaatat 3368667  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  3368666 tagatttaa 3368658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 4546604 - 4546731
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| | || |||||||| |||| |||||||| ||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||||     
T  4546604 gtaattgtacacataattattatcatggaaaaggtttcgttagatcacttgacattcttgtcacttggatagcaatgatgtgttgctagataccgctcat 4546703  T
Q  176 tgtttataatattaaatatgtgatttaa 203  Q
    |||||||| ||||||||||  |||||||    
T  4546704 tgtttatagtattaaatattagatttaa 4546731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 4675717 - 4675618
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| ||||  |||||||    
T  4675717 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattagatattagatttaa 4675618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 18163730 - 18163829
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| ||||  |||||||    
T  18163730 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattagatattagatttaa 18163829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 20244505 - 20244604
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| ||||  |||||||    
T  20244505 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattagatattagatttaa 20244604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 28917497 - 28917418
Alignment:
Q  115 tcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  28917497 tcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttataatattaaatat 28917418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 9488118 - 9488216
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||| |||||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||  |||||||    
T  9488118 aaagttttcgtcagatcacttgacattcttgtcacttggatagcaatgatgtgttgctagatactgctcattgtttataatattaaatattagatttaa 9488216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 32636986 - 32637152
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag-gtttcgtcagatcacatgacattctcgt 136  Q
    |||||| |||||| |||||||| | |||||| |||| | |||||| ||||| ||| || |||||||||||  ||||||||| ||||  | ||||||| ||    
T  32636986 tctatgtcttgtgatcaatatagatatgaggacaaatgagtaattgtacacatgaacaatatcatagaaaaagtttcgtcaaatcatttaacattcttgt 32637085  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||| ||||| ||||||||||||||||||| ||| || |||||||||||||||||||  |||||||    
T  32637086 cacttaggtagtagtgatgtgttgctagatatcgcccattgtttataatattaaatataagatttaa 32637152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 1942260 - 1942358
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||  ||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||  |||||||    
T  1942260 aaaggttttttcagatcacttgacattcttttcacttgggtagcaatgatgtgttgctagataccgctcattgtttatagtattaaatattagatttaa 1942358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 11421558 - 11421645
Alignment:
Q  106 aaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||| ||||   ||||||||||||||||||||||    
T  11421558 aaggtttcgtcatatcacttgacattcttgtcacttgggtagcaatgatgtgttgctaaatacatatcactgtttataatattaaata 11421645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 9937636 - 9937456
Alignment:
Q  22 gacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatc 121  Q
    ||||| ||||||||||| |||| |||||||| |||||| ||||  ||| ||||  ||||||||||| || || ||||||| | |||| ||| | || |||    
T  9937636 gacaatgatgacacggtatatgtcttgtgttaaatatagacataggggaaaaattgtaattatacatgtaataattatcacataaagattt-gccaaatc 9937538  T
Q  122 acatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||| ||||||| ||  | |||||| | ||||| | |||| |||||||||||||||| |||| ||||||    
T  9937537 acatgacattctcgtcatttgggtaacaacggtgtgttacaagatatcactcattgtttataatattaaagatgttatttaa 9937456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 36092867 - 36092956
Alignment:
Q  78 taattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagata 167  Q
    ||||||||||| | ||| |||||| | ||| ||||| ||| ||||||||||||||| ||||||| ||||| |||||||||||| ||||||    
T  36092867 taattatacacataatctttatcacataaatgtttcttcatatcacatgacattctagtcacttaggtagtagtgatgtgttgttagata 36092956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 23055877 - 23055697
Alignment:
Q  23 acaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag-gtttcgtcagatc 121  Q
    |||| ||||||||  | |||| ||||| |||||||||  ||| |  ||||| |||| ||||||||| ||| ||||| | | ||||  |||||||||||||    
T  23055877 acaaagatgacacaatttatgtcttgtcttcaatatagtcataaatgcaaaggggtgattatacacatgaacattaccgtggaaaatgtttcgtcagatc 23055778  T
Q  122 acatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    | ||||||||||||||||||||||| ||  |  || ||||||||| |   ||| ||||||||||||| ||||| ||||||||    
T  23055777 atatgacattctcgtcacttgggtaacaacgtcgtattgctagatgcttatcattgtttataatatt-aatatatgatttaa 23055697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 20311872 - 20311992
Alignment:
Q  39 ctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtca 138  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||| || |||   ||  ||||||  ||||  |||| ||| || || ||| ||||| ||||    
T  20311872 ctatgccttatgttcaatatagacatgagagcaaaagggtaataatgcacaatatatttatcactgaaaattttcatcatattacttgaaattcttgtca 20311971  T
Q  139 cttgggtagcagtgatgtgtt 159  Q
    ||||||||||||||| |||||    
T  20311972 cttgggtagcagtgacgtgtt 20311992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 469135 - 469237
Alignment:
Q  92 atcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaa 191  Q
    |||||| |||| ||||||||| |||||||||  ||| |||||||  |||| | ||  | ||||||||||||||||| | |||||| |||| |||||||||    
T  469135 atcattttcatggaaaggttt-gtcagatcatgtgatattctcggtacttagatattaatgatgtgttgctagatatctctcactatttaaaatattaaa 469233  T
Q  192 tatg 195  Q
    ||||    
T  469234 tatg 469237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 8859362 - 8859397
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  8859362 gtgatcagaaagatttctgctacaaaggttctgctc 8859397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 10620345 - 10620310
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  10620345 gtgatcagaaagatttctgctacagaggttctgctc 10620310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 10627427 - 10627392
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  10627427 gtgatcagaaagatttctgctacagaggttctgctc 10627392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 10825364 - 10825329
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  10825364 gtgatcagaaagatttctgctacagaggttctgctc 10825329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 55613878 - 55613913
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  55613878 gtgatcagaaagatttctgctacaaaggttctgctc 55613913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 27031344 - 27031402
Alignment:
Q  41 atgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattat 99  Q
    ||||||||||||||||||| ||| |||||||||| | | ||||||||| |||| |||||    
T  27031344 atgccttgtgttcaatatagacacgagggcaaaatgatgattatacacatgattattat 27031402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 43707183 - 43707115
Alignment:
Q  30 tgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattat 99  Q
    ||||||| | |||||||||||||||||||| ||||   || |||| ||||||||||||| ||||||||||    
T  43707183 tgacacgatatatgccttgtgttcaatataaacat-ttggtaaaatggtaattatacacatgatcattat 43707115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 22805636 - 22805696
Alignment:
Q  8 ccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagg 68  Q
    |||||||||||||| |  ||| | ||||||||||||||||||||| |||||| ||| ||||    
T  22805636 ccaatattgaactaaattagggtaacacggtctatgccttgtgtttaatatagacacgagg 22805696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 24699766 - 24699722
Alignment:
Q  150 gtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    ||||||||||||||||||||  ||| | |||||||||||||||||    
T  24699766 gtgatgtgttgctagataccagtcattatttataatattaaatat 24699722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10572252 - 10572050
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  10572252 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 10572153  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572152 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 10572053  T
Q  201 taa 203  Q
    |||    
T  10572052 taa 10572050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10579016 - 10578814
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  10579016 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 10578917  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10578916 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 10578817  T
Q  201 taa 203  Q
    |||    
T  10578816 taa 10578814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6110611 - 6110813
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  6110611 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgggggcaaaagggtaattatacacatgatcattatc 6110710  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110711 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 6110810  T
Q  201 taa 203  Q
    |||    
T  6110811 taa 6110813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16482143 - 16481941
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  16482143 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 16482044  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16482043 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgcttgataccgctcactgtttataatattaaatatgtgatt 16481944  T
Q  201 taa 203  Q
    |||    
T  16481943 taa 16481941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 13211849 - 13212047
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  13211849 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 13211948  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgat 199  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211949 acagaaagatttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgat 13212047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 13517354 - 13517556
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  13517354 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 13517453  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13517454 acagaaaggtttcgtcagatcacatggcattctcgtcacttgggtagcagtgatgtgttgctagataccactcactgtttataatattaaatatgtgatt 13517553  T
Q  201 taa 203  Q
    |||    
T  13517554 taa 13517556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15600544 - 15600342
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| ||||    
T  15600544 tacgggcccaatattgaactagacaaggatgacacggtctatgccttatgttcaatatagacatgagggcaaaagggtaattatacacatgatcactatc 15600445  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600444 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 15600345  T
Q  201 taa 203  Q
    |||    
T  15600344 taa 15600342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15607089 - 15606887
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| ||||    
T  15607089 tacgggcccaatattgaactagacaaggatgacacggtctatgccttatgttcaatatagacatgagggcaaaagggtaattatacacatgatcactatc 15606990  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15606989 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 15606890  T
Q  201 taa 203  Q
    |||    
T  15606889 taa 15606887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 8491042 - 8491244
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  8491042 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaaggataattatacacatgatcattatc 8491141  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8491142 acagaaaggtttcgtcatattacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 8491241  T
Q  201 taa 203  Q
    |||    
T  8491242 taa 8491244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 15357246 - 15357045
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  15357246 tacgggcccaatattgaactagacaaggatgacacggtttatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 15357147  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15357146 acataaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatactaaatatgtgatt 15357047  T
Q  201 ta 202  Q
    ||    
T  15357046 ta 15357045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 17780778 - 17780576
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||    
T  17780778 tacgggcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacatatgatcattatc 17780679  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17780678 acataaaggtttcgtcagatcacatgacattctcatcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 17780579  T
Q  201 taa 203  Q
    |||    
T  17780578 taa 17780576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 15341879 - 15341678
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  15341879 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggaaaaagggtaattatacacatgatcattatc 15341780  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15341779 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagcgatgtggtgctagataccgctcactgtttataatactaaatatgtgatt 15341680  T
Q  201 ta 202  Q
    ||    
T  15341679 ta 15341678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 1647181 - 1646979
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  1647181 tacgggcccaattttgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagagtaattatacacatgatcattatc 1647082  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  1647081 acagaaaggtttcgtcagatcacatgacattttcgtcacttgggtagcagtgttgtgttgctagataatgctcactgtttataatattaaatatgtgatt 1646982  T
Q  201 taa 203  Q
    |||    
T  1646981 taa 1646979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 18520522 - 18520711
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||||    
T  18520522 tacgggcccaatattgaactacacaaggatgacacggtctatgccttgtgtttaatatagacatgagggcaaaaggataattatacacatgatcattatc 18520621  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaa 190  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18520622 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctccctgtttataatattaa 18520711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 17136900 - 17137102
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||| |||||||||||    
T  17136900 tacggacccaatattgaacaagacaaggatgacacggtctatgccttgtgtttaatatagacaggagggaaaaagggtaattatacacatgatcattatc 17136999  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17137000 acagaaaggtttcgtcagatcacaagaaattcacgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatgtgtgatt 17137099  T
Q  201 taa 203  Q
    |||    
T  17137100 taa 17137102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 6 - 203
Target Start/End: Complemental strand, 23015014 - 23014818
Alignment:
Q  6 gcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcataga 105  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||| ||| |||||||| |||    
T  23015014 gcccaatattgaactagacaag-atgacacggtctatgccttgtgttcattatagacacgagggcaaaaggataattatacacatgaacattatcacaga 23014916  T
Q  106 aaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  23014915 aaggtttcgtcagatcacataacattctcgtcacttggttagcagtgatgtgttgctagataccgctcactgtctataatattaaatacgtgatttaa 23014818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 17197383 - 17197213
Alignment:
Q  32 acacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacatt 131  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||   |||||||| ||||||||||||||||||    
T  17197383 acacggtctatgccttgtgttcaatatata-atgagggcaaaagggtaattatacacatgatcattatcacgtaaaggttttgtcagatcacatgacatt 17197285  T
Q  132 ctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  17197284 ctcgtcacttgggtagcagtgatgtgttgctagataccactcactttttataatattaaatatgtgatttaa 17197213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 13249154 - 13249289
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  13249154 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggaaaaagggtaattatacacatgatcattatc 13249253  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgt 136  Q
    | |||||| |||||||||||||||||||||||||||    
T  13249254 acagaaagatttcgtcagatcacatgacattctcgt 13249289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 15846295 - 15846170
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||||||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  15846295 gtaattatacacatgaatattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 15846197  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  15846196 gtttataatattaaatatcagatttaa 15846170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 15538038 - 15538204
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgt 136  Q
    |||||| |||||| |||||||| | |||||| |||| | |||||| ||||| ||| ||||||||| |||| |||||||||| ||||| ||||||||| ||    
T  15538038 tctatgtcttgtgatcaatatagatatgaggacaaatgcgtaattgtacacatgaacattatcatggaaaaggtttcgtcatatcacttgacattcttgt 15538137  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
     |||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||  |||||||    
T  15538138 tacttgggtagtagtgatgtgttgctagataccgctcactttttataatattgaatataagatttaa 15538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 21034781 - 21034906
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  21034781 gtaattgtacacatgaatattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 21034879  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  21034880 gtttataatattaaatatcagatttaa 21034906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 21399328 - 21399460
Alignment:
Q  70 caaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagatacc 169  Q
    |||||| |||||| ||||| |||   ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  21399328 caaaagagtaattgtacacatgaattttatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagatacc 21399426  T
Q  170 gctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||| |||||||||||||||||||  |||||||    
T  21399427 gctcattgtttataatattaaatatcagatttaa 21399460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 203
Target Start/End: Original strand, 25800863 - 25801028
Alignment:
Q  39 ctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggt-ttcgtcagatcacatgacattctcgtc 137  Q
    ||||| |||||||| |||||| ||||||||  |||||||||||||||||| ||||| |||||||| |||    ||||||| |||||||||||||||||||    
T  25800863 ctatgtcttgtgtttaatataaacatgaggataaaagggtaattatacacatgatcgttatcataaaaaaaaattcgtcaaatcacatgacattctcgtc 25800962  T
Q  138 acttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    | |||||||||||||||||||||||| ||| || |||| |||||| |||| | |||||||||||||    
T  25800963 atttgggtagcagtgatgtgttgctaaatatcgttcaccgtttattatatcacatatgtgatttaa 25801028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32056559 - 32056458
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaat-atatacatgagggcaaaagggtaattatacacgtgatcattat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| |||| |||||    
T  32056559 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaataatagacatgagggcaaaagagtaattatacacatgattattat 32056460  T
Q  100 ca 101  Q
    ||    
T  32056459 ca 32056458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 28088666 - 28088774
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| ||| ||||||  |||||||||    
T  28088666 attatcatggaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgcttactatttatagcattaaatat 28088765  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  28088766 tagatttaa 28088774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 203
Target Start/End: Original strand, 9504893 - 9505055
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcac 139  Q
    ||||| |||||||| |||||||||||||||||||||   |||||||||   ||||||||||| | ||||||||  ||||||||| ||||||| || ||||    
T  9504893 tatgcattgtgttctatatatacatgagggcaaaagaacaattatacataagatcattatcacataaaggtttt-tcagatcacgtgacattttcatcac 9504991  T
Q  140 ttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||| ||||||||||||| |||  ||||  || ||||||| |||||||||||||||||    
T  9504992 ttgggtagcactgatgtgttgctacatattgctccatgattataattttaaatatgtgatttaa 9505055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 12300478 - 12300577
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||  |||||||    
T  12300478 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattaaatattagatttaa 12300577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 18523213 - 18523296
Alignment:
Q  5 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacac 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||    
T  18523213 ggcccaatagtgaactagacaaggatgacacggtctatgccttgtgtttaatatagacatcagggcaaaagggtaattatacac 18523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 26816801 - 26816960
Alignment:
Q  45 cttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtcacttgg 143  Q
    |||||| |||||||| | |||||| |||| | ||||   ||||| ||| ||||||||| |||| ||||| |||| ||||| ||||||||| ||||||| |    
T  26816801 cttgtgatcaatataaatatgaggacaaaggagtaagcgtacacatgaacattatcatggaaaaggttttgtcatatcacttgacattcttgtcactttg 26816900  T
Q  144 gtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  26816901 gtagcaatgatgtgttgctagataccgctcattgtttataatattaaatataagatttaa 26816960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 20147296 - 20147200
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    |||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  20147296 attatcat-gaaatgtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaat 20147200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 29925522 - 29925683
Alignment:
Q  5 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcata- 103  Q
    |||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||| ||||||||| |||| ||||||||||||    | | |||||| |     
T  29925522 ggcccaatattgaactagacaagggtgacatg--ctatgtcttgtgttcaatatagacatgagggtaaaatggtaattatacaaacaaacgttatcacat 29925619  T
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagata 167  Q
     |||||||| |||| | ||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  29925620 aaaaggttttgtcataacacatgaaattctcgtcatttgagtagcagtgatgtgttgctagata 29925683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 29974676 - 29974837
Alignment:
Q  5 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcata- 103  Q
    |||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||| ||||||||| |||| ||||||||||||    | | |||||| |     
T  29974676 ggcccaatattgaactagacaagggtgacatg--ctatgtcttgtgttcaatatagacatgagggtaaaatggtaattatacaaacaaacgttatcacat 29974773  T
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagata 167  Q
     |||||||| |||| | ||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  29974774 aaaaggttttgtcataacacatgaaattctcgtcatttgagtagcagtgatgtgttgctagata 29974837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 55427589 - 55427688
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| ||||  |||||||    
T  55427589 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattagatattagatttaa 55427688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 11788129 - 11788247
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| | || |||||||| |||| |||||||||||||||| ||||||| | ||||||||||||||| | ||||||||||||||| ||||||     
T  11788129 gtaattgtacacataattattatcatggaaaaggtttcgtcagatcacttgacattattgtcacttgggtagcaataatgtgttgctagatatcgctcat 11788228  T
Q  176 tgtttataatattaaatat 194  Q
    |||||||| ||||||||||    
T  11788229 tgtttatagtattaaatat 11788247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 15316907 - 15316809
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||| ||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||| | |||||| ||||||||||  |||||||    
T  15316907 aaaggtttcgtcatatcacttgacattcttgtcacttgtgtagcaatgatgtgttgctagataccgctcattatttatagtattaaatattagatttaa 15316809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 14147590 - 14147679
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||| |||||||||  ||||| |||||||||||||||||||    
T  14147590 aaaggtttcgtcatatcacttgacattcttgtcacttgggtagcaatgatgtgatgctagatattgctcattgtttataatattaaatat 14147679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 25978454 - 25978361
Alignment:
Q  110 tttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||| ||||| ||| ||||| |||||||||||  || |||||||||||||||||||||||| |||||||| ||||||||||  |||||||    
T  25978454 tttcgtcaaatcacttgatattcttgtcacttgggtgacaatgatgtgttgctagataccgctcattgtttatagtattaaatattagatttaa 25978361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 16241026 - 16241157
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaagg 109  Q
    ||||||| |||| |||||||||||||  | |||| ||| ||||||||||| | || || | ||| || || ||||| || ||||| |||||| | ||| |    
T  16241026 aatattggactacacaaggatgacactatatatgtcttatgttcaatatagatataagagaaaagggttagttatatacatgatcgttatcagataaaag 16241125  T
Q  110 tttcgtcagatcacatgacattctcgtcactt 141  Q
    ||| |||||||||||||| |||||| ||||||    
T  16241126 ttttgtcagatcacatgatattctcatcactt 16241157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 203
Target Start/End: Complemental strand, 35199298 - 35199103
Alignment:
Q  7 cccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaa 106  Q
    |||||||||||| |  |||||| ||| ||||| |||  |||||||||||||||  ||| | ||||||  | |||||| |||| ||||| |||| | | ||    
T  35199298 cccaatattgaattgaacaagggtgatacggtttatagcttgtgttcaatataagcat-atggcaaattgataattacacacatgatctttataacataa 35199200  T
Q  107 aggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
     | ||| ||| || |||||||||||||||||| || | ||| | |||||| |||||||| | | ||   ||| ||||||||||||||| ||||||||    
T  35199199 tgatttggtctgaacacatgacattctcgtcatttagatagaattgatgtattgctagacatctcttgatgtatataatattaaatatatgatttaa 35199103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 10571603 - 10571568
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  10571603 gtgatcagaaagatttctgctacaaaggttctgctc 10571568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 15599921 - 15599886
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  15599921 gtgatcagaaagatttctgctacaaaggttctgctc 15599886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 15606466 - 15606431
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  15606466 gtgatcagaaagatttctgctacaaaggttctgctc 15606431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 16481495 - 16481460
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  16481495 gtgatcagaaagatttctgctacaaaggttctgctc 16481460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 17199844 - 17199809
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacg 36  Q
    ||||| ||||||||||||||||||||||||||||||    
T  17199844 tacggacccaatattgaactagacaaggatgacacg 17199809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 18538165 - 18538200
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  18538165 gtgatcagaaagatttctgctacaaaggttctgctc 18538200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 29925697 - 29925729
Alignment:
Q  171 ctcactgtttataatattaaatatgtgatttaa 203  Q
    |||| ||||||||||||||||||||||||||||    
T  29925697 ctcaatgtttataatattaaatatgtgatttaa 29925729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 29974851 - 29974883
Alignment:
Q  171 ctcactgtttataatattaaatatgtgatttaa 203  Q
    |||| ||||||||||||||||||||||||||||    
T  29974851 ctcaatgtttataatattaaatatgtgatttaa 29974883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21329908 - 21329706
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  21329908 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 21329809  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21329808 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 21329709  T
Q  201 taa 203  Q
    |||    
T  21329708 taa 21329706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22791518 - 22791316
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  22791518 tacgggaccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 22791419  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    |  ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22791418 actgaaaggtttcgtcagatcacatgacattctcgtcatttgggtaacagtgatgtgttgctagatactgctcactgtttataatattaaatatgtgatt 22791319  T
Q  201 taa 203  Q
    |||    
T  22791318 taa 22791316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 18797053 - 18797245
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||||||||| |||||||||||||||||| ||| |||| ||    
T  18797053 tacgggcccaatattgaactagacaaggatgacatggtttatgccttgtattcaatatagacatgagggaaaaagggtaattatacacatgagcattgtc 18797152  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18797153 acggaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcaatgatgtgttgctagataccgctcactgtttataatattaaata 18797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 41661823 - 41662021
Alignment:
Q  5 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatag 104  Q
    ||||||||||||||||  |||||| |||||     ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |    
T  41661823 ggcccaatattgaactgaacaagggtgacatatattataccttgtgttcaatatatacatgagggcaaaatggtaattatacatgtgatcattatcacgg 41661922  T
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41661923 aaaggtttcgtcagatcacatgacattctcgtcacttgtgtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 41662021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 39 - 203
Target Start/End: Original strand, 36270745 - 36270908
Alignment:
Q  39 ctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtca 138  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||  |||| ||||| || |||||||| |||||||||| ||||||||||||||    
T  36270745 ctatgccttgtgttcaatatagacatgagggaaaaagggtaactatacacaagatctttatcgtataaaggttt-gtcagatcacgtgacattctcgtca 36270843  T
Q  139 cttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||  ||  |||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  36270844 cttaagttacagtgatgtgttgctagatatcgctcactatttataatattaaatatgtaatttaa 36270908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18620350 - 18620549
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaag-ggtaattatacacgtgatcattat 99  Q
    ||||||||||||||| ||||  |||||| ||||| |  ||||||||||||||||||||| |||||||| |||||  ||||||||||||||  ||||||||    
T  18620350 tacgggcccaatattaaactgaacaagggtgacatg--ctatgccttgtgttcaatatagacatgaggacaaaaatggtaattatacacg--atcattat 18620445  T
Q  100 catagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgat 199  Q
    ||   ||| |||||| || |||||||||| |||||||||||||| || ||||||||  || |||||||||||||||| ||||||||||||||||||||||    
T  18620446 cacgaaaatgtttcggcatatcacatgacgttctcgtcacttggataacagtgatgaatttctagataccgctcactatttataatattaaatatgtgat 18620545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 24249774 - 24249667
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24249774 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttataatattaaatat 24249676  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  24249675 tagatttaa 24249667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 29801013 - 29801140
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| ||| ||||||||| |||| |||||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  29801013 gtaattgtacacatgaacattatcatggaaaaggtttcgtcagatcaattgacattcttgtcacttaggtagcagtgatgtgttgctagataccactcac 29801112  T
Q  176 tgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||  |||||||    
T  29801113 tgtttataatattaaatataagatttaa 29801140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 15341829 - 15341635
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag- 108  Q
    |||||||| ||| |||||| |||||   |||||||||||||   |||||| | ||||||  ||| | |||||| | ||| |||  |||||||| ||||      
T  15341829 aatattgatctatacaagggtgacaaaatctatgccttgtgagaaatatagatatgaggataaatgagtaattgtgcacatgaatattatcatggaaaat 15341730  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  15341729 gtttcgtcagatcacttgacattcttgtcacttgggtagcggtggtgtgttgctagataccgctcactatttataatattaaatatatgatttaa 15341635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 30174937 - 30175044
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  30174937 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagccatgatgtgttgctagataccgctcattgtttataatattaaatat 30175035  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  30175036 tagatttaa 30175044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 19616909 - 19617092
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag- 108  Q
    |||||||| ||| |||||| |||||   ||||||||||||| |||||||| | |||||| |||| | ||| || ||||| |||  |||||||| ||||      
T  19616909 aatattgatctatacaagggtgacaatatctatgccttgtgatcaatatagatatgaggacaaaggagtatttgtacacatgaatattatcatcgaaaaa 19617008  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    ||||||||| ||||| ||||||||| ||||||||||||||| | |||||||||||||||||||| | |||||||||||||||||    
T  19617009 gtttcgtcatatcacttgacattcttgtcacttgggtagcaataatgtgttgctagataccgcttattgtttataatattaaat 19617092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 22183110 - 22182960
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcac 139  Q
    ||||||||||||||||||||||||||||| |||||||||||||| | | |  ||  |||||| | |||||||| || ||||||| ||||||||| || ||    
T  22183110 tatgccttgtgttcaatatatacatgaggacaaaagggtaattacagaagatat--ttatcacaaaaaggttt-gtaagatcacgtgacattcttgttac 22183014  T
Q  140 ttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    |||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||    
T  22183013 ttgggtagcagtaatgtgttactagatacctctcattgtttataatattaaata 22182960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 24228974 - 24228848
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| |||    
T  24228974 gtaattgtacacatgagtattatcatggaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgcttact 24228875  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
     ||||||  |||||||||  |||||||    
T  24228874 atttatagcattaaatattagatttaa 24228848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 6991762 - 6991590
Alignment:
Q  12 tattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtt 111  Q
    ||||||||| ||||||| ||||||   ||||| ||||||||||||||| |||||||||| |||  ||||||||||||  |||    ||||  |||| |||    
T  6991762 tattgaactggacaagggtgacaca--ctatgtcttgtgttcaatatagacatgagggccaaaaagtaattatacacaagat----atcacggaaaagtt 6991669  T
Q  112 tcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaa 190  Q
    ||||||||||| |||||||||| ||||||| |||||  |||||||||| ||||||||||||| |||| | |||||||||    
T  6991668 tcgtcagatcatatgacattcttgtcacttaggtagtcgtgatgtgtttctagataccgctctctgtatgtaatattaa 6991590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 20687146 - 20687048
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||| ||||||| ||||||||| |||| |||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||  |||||||    
T  20687146 aaaggtttcgtaagatcacttgacattcttgtcatttgggtagcagtgaggtgttgctagatatcgctcactgtttatagtattaaatataagatttaa 20687048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 31847947 - 31848115
Alignment:
Q  25 aaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcaca 124  Q
    |||| ||||||||| |||| ||| |||| | || | ||||||  |||||||| ||||||||||| ||| |||||||| | ||| |||| ||||  ||||     
T  31847947 aagggtgacacggtttatgtcttatgtttattaaagacatgaatgcaaaaggataattatacacatga-cattatcacataaaagttttgtcatgtcact 31848045  T
Q  125 tgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||| ||||||||||||  || | |||||| |||||||||||||||||||||||||||| ||||||||    
T  31848046 tgacatcctcgtcacttggaaagtaatgatgtattgctagataccgctcactgtttataatgttaaatat 31848115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 24763499 - 24763305
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-g 108  Q
    ||||||||  || |||||| |||||  ||||||  |||||| |||||||  | || ||| |||| | |||| ||||||| |||  |||||||| |||| |    
T  24763499 aatattgatatatacaagggtgacaatgtctatatcttgtgatcaatattgatataaggacaaaggagtaagtatacacatgaatattatcatggaaaag 24763400  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||| |||||||| |||||||||  ||||||||  || || |||||||||||||||||| ||||| |||||||||||||||||||  |||||||    
T  24763399 gtttcatcagatcatatgacattcgtgtcacttgaataacaatgatgtgttgctagatacggctcattgtttataatattaaatattagatttaa 24763305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 12298416 - 12298502
Alignment:
Q  117 agatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||| | ||||||  ||||||  ||||| |||||||||||| |||||||| || | ||||||||||||||||||||||||||||    
T  12298416 agatcacgtaacattcctgtcactaaggtagaagtgatgtgttgttagataccacttattgtttataatattaaatatgtgatttaa 12298502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 17241262 - 17241338
Alignment:
Q  7 cccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaatta 83  Q
    ||||||||||||||||| ||||||||||| |||||| |||| ||||||||||| |||| || |||||| | ||||||    
T  17241262 cccaatattgaactagataaggatgacactgtctataccttatgttcaatatagacataagagcaaaaagataatta 17241338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 138
Target Start/End: Complemental strand, 41315683 - 41315554
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcat-agaaag 108  Q
    ||||||| |||| | |||| ||||||  |||||| ||||||||||||||| | || |||  ||| | |||||||||||  ||| | ||||||  | |||     
T  41315683 aatattggactatataagggtgacacaatctatgtcttgtgttcaatatagatataaggaaaaatgagtaattatacatatgacctttatcacgaaaaaa 41315584  T
Q  109 gtttcgtcagatcacatgacattctcgtca 138  Q
    ||||||||||||||||||||||||||||||    
T  41315583 gtttcgtcagatcacatgacattctcgtca 41315554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 23662022 - 23662105
Alignment:
Q  28 gatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggttt 112  Q
    |||||||||||| ||||||||||||||| ||| | ||||| | |||| ||||| ||||||| |||||||||||| | ||||||||    
T  23662022 gatgacacggtcaatgccttgtgttcaacatagatatgagagtaaaaaggtaa-tatacacatgatcattatcacaaaaaggttt 23662105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 39338187 - 39338251
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcactt 141  Q
    |||||||||||| |||||||||||| | | | |||||||| ||||| |||||||| |||||||||    
T  39338187 gtaattatacacatgatcattatcacatatatgtttcgtcggatcatatgacattatcgtcactt 39338251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 41332825 - 41332867
Alignment:
Q  151 tgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    ||||||||||||||||||| |||||| |||||||||| |||||    
T  41332825 tgatgtgttgctagataccactcactatttataatatcaaata 41332867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18252577 - 18252779
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18252577 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 18252676  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252677 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 18252776  T
Q  201 taa 203  Q
    |||    
T  18252777 taa 18252779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18532174 - 18531972
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||    
T  18532174 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgtttaatatagacatgagggcaaaagggtaattatacacatgatcattatc 18532075  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532074 acagaaaggtttcgtcagatcacatgacattctcgtcacttaggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 18531975  T
Q  201 taa 203  Q
    |||    
T  18531974 taa 18531972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 27310233 - 27310035
Alignment:
Q  5 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatag 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |     
T  27310233 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacaa 27310134  T
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310133 aaaggtttcgtcatatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 27310035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 27131070 - 27130868
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  27131070 tacgggcccaatattgaactagacaaggatgacacggtctatgtcttgtgttcaatatagacatgagggcaaaagggtaattatacacatgaacattatc 27130971  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    |  ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27130970 acggaaaggttttgtcatatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 27130871  T
Q  201 taa 203  Q
    |||    
T  27130870 taa 27130868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16358695 - 16358493
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||    
T  16358695 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagagatgagggcaaaagggtaattatacacatgatcattatc 16358596  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    |  |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  16358595 acggaaaggtttcgtcatatcacatgatattctcgtcacttggatagcagtgatgtgttgctagatatcgctcactgtttatagtattaaatatgagatt 16358496  T
Q  201 taa 203  Q
    |||    
T  16358495 taa 16358493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 27277218 - 27277018
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||| |||||  |||||| ||||| |  ||||||||||||||||||||| ||||||||| |||||||||||||| |||   ||||| |||    
T  27277218 tacgggcccaatatcgaactgaacaagggtgacatg--ctatgccttgtgttcaatataaacatgagggaaaaagggtaattatgcacacaatcatcatc 27277121  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | | ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27277120 acaaaaaggtttcatcagatcacatgacattctcgtcacttgggtaggagtgatgtgttactagataccgctcactgtttataatattaaatatgtgatt 27277021  T
Q  201 taa 203  Q
    |||    
T  27277020 taa 27277018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 36816257 - 36816093
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtca 138  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |||   | |||||||| | ||| |||||||||||||||||||||||||||||||    
T  36816257 tatgccttgtgttcaatatagacataagggcaaaagggtaattatgcacacaaacattatcacataaaaggtttcgtcagatcacatgacattctcgtca 36816158  T
Q  139 cttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||| ||| || |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  36816157 cttgagtaacattgatgtgttgctagatattgctcactgtttataatattaaatatgtgatttaa 36816093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 31234575 - 31234391
Alignment:
Q  8 ccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa 107  Q
    ||||||||||||| ||||||| |||||||  ||||||||||||||||||||| ||||||||||||||  |||||  |||||  |||  ||| || | |||    
T  31234575 ccaatattgaactggacaagggtgacacg--ctatgccttgtgttcaatatagacatgagggcaaaatagtaatattacacaagattgttagcacataaa 31234478  T
Q  108 ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  31234477 ggtttcgtcagatcacatgacattcttgtgactttggtagcagtgatgtgttgttagataccactcaccgtttataatattaaatat 31234391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 22641534 - 22641342
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||| || ||||||| |||||    ||||||||||||||||||||| ||||||||| ||||||||||||||||||  || |||||||    
T  22641534 tacgggcccaatattgatctggacaagggtgacatc--ctatgccttgtgttcaatatagacatgagggaaaaagggtaattatacacaagaacattatc 22641437  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    |  |||||||||| ||| ||||||||| |||      ||||||||||||| ||||| |||| ||||| ||||||||||||||||||||||| ||||||||    
T  22641436 actgaaaggtttcatcatatcacatgaaatt------acttgggtagcagcgatgttttgcgagatatcgctcactgtttataatattaaacatgtgatt 22641343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 28134482 - 28134357
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||||||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  28134482 gtaattatacacatgaatattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 28134384  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  28134383 gtttataatattaaatatcagatttaa 28134357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 202
Target Start/End: Complemental strand, 12006202 - 12006007
Alignment:
Q  4 gggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcata 103  Q
    ||||||||||||||||| ||||||| ||| ||   |||||| || ||||||||||| ||||   |||| |||||||||||| |||   ||| |||||| |    
T  12006202 gggcccaatattgaactggacaagggtgaaaca--ctatgcattttgttcaatatagacattctggcagaagggtaattatgcacaacatctttatcaca 12006105  T
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgattta 202  Q
    ||||||||| |||| ||||| ||  ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||| |||||    
T  12006104 gaaaggttt-gtcatatcacgtggtattctcgtcacttgggtagtagtgatgtgttgctagataccgctcactgtatatactattaaatatgtaattta 12006007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 19706198 - 19706073
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  19706198 gtaattgtacacatgaatattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 19706100  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  19706099 gtttataatattaaatatcagatttaa 19706073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 47667236 - 47667128
Alignment:
Q  85 acacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataa 184  Q
    ||||||||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  47667236 acacgtgaatattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttataa 47667138  T
Q  185 tattaaatat 194  Q
    ||||||||||    
T  47667137 tattaaatat 47667128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 9456676 - 9456783
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  9456676 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagccatgatgtgttgctagataccgctcattgtttataatattaaatat 9456774  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  9456775 tagatttaa 9456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 9460772 - 9460879
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  9460772 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagccatgatgtgttgctagataccgctcattgtttataatattaaatat 9460870  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  9460871 tagatttaa 9460879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 20779387 - 20779280
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  20779387 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagccatgatgtgttgctagataccgctcattgtttataatattaaatat 20779289  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  20779288 tagatttaa 20779280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 22669999 - 22669903
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  22669999 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaat 22669903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 42816731 - 42816635
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  42816731 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaat 42816635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 22613053 - 22613144
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatat 187  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  22613053 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttataatat 22613144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 33283590 - 33283491
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||  |||||||    
T  33283590 gaaaggtttcgtcagattacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatagtattaaatattagatttaa 33283491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3855579 - 3855497
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaatta 83  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  3855579 tacgagcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagtcatgagggcgaaagggtaatta 3855497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 23507454 - 23507636
Alignment:
Q  8 ccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa 107  Q
    |||||||| |||||||| ||| |||||||||  ||||||||||||||||||| ||| || || ||||||||||||||||     ||||||||||   |||    
T  23507454 ccaatattaaactagaccagggtgacacggt--atgccttgtgttcaatatagacacgaaggaaaaagggtaattatacgaaaaatcattatcaagaaaa 23507551  T
Q  108 ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    |||||| ||| ||||||||||||||  |||||||| |||||||||||  ||||||||||||| || | |||||| | ||||||||    
T  23507552 ggtttcttcatatcacatgacattcatgtcacttgtgtagcagtgataggttgctagatacctcttattgtttaaattattaaat 23507636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 20390981 - 20390874
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||||  ||||||||||    
T  20390981 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctacataccgctcattgtttatggtattaaatat 20390883  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  20390882 tagatttaa 20390874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 14482458 - 14482557
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| ||||  |||||||    
T  14482458 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattagatattagatttaa 14482557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 634480 - 634594
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaag-gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| |||  |||||||| ||||  ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||     
T  634480 gtaattgtacacatgaatattatcatggaaaatgtttcgtcagatcacatgacattcttgtcactttggtagcaatgatgtgttgctagataccgctcat 634579  T
Q  176 tgtttataatattaa 190  Q
    |||||||| ||||||    
T  634580 tgtttatagtattaa 634594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 8728237 - 8728331
Alignment:
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||| |||||||||  |||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||  |||||||    
T  8728237 gtttcgtcagatcacttgacattcttttcacttgggtagcaatgatgtgttcctagatactgctcactgtttataatattaaatattagatttaa 8728331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 43802124 - 43802008
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||| ||||||| | ||||||| ||||||||||||||| ||||||||| |||||||||||||| |    
T  43802124 gtaattgtacacatgaatattatcat-gaaaggtttcgttagatcacttaacattcttgtcacttgggtagcaatgatgtgttactagataccgctcatt 43802026  T
Q  177 gtttataatattaaatat 194  Q
    ||||||||| ||||||||    
T  43802025 gtttataattttaaatat 43802008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 194
Target Start/End: Complemental strand, 9916401 - 9916247
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcac 139  Q
    ||||||||||||||||| || | ||||||| ||||||||| ||||||||   ||| |||||| | ||| ||||| ||||||||| ||||||||| |||||    
T  9916401 tatgccttgtgttcaatttagaaatgagggaaaaagggtagttatacacaatatcgttatcacataaatgtttcatcagatcacttgacattcttgtcac 9916302  T
Q  140 ttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||  ||  |||||| ||||| |||||| | |||||| |||||||||||||||||    
T  9916301 ttgattaatagtgatttgttgttagatatcactcactatttataatattaaatat 9916247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 194
Target Start/End: Original strand, 35132464 - 35132597
Alignment:
Q  61 acatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttg 160  Q
    |||||||||||||| | |||||||||||   |||||||||| | ||| |||| |  ||||||||||| ||||| |||| ||| |||||| |  |||||||    
T  35132464 acatgagggcaaaaagataattatacacaaaatcattatcacataaatgttttggtagatcacatgatattcttgtcatttgagtagcattagtgtgttg 35132563  T
Q  161 ctagataccgctcactgtttataatattaaatat 194  Q
    |||||||||||||||| ||||| |||||||||||    
T  35132564 ctagataccgctcactatttatgatattaaatat 35132597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 12013943 - 12013762
Alignment:
Q  4 gggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcata 103  Q
    ||||||||||||||||| ||||||| || ||    |||||| |||||||||||||| ||||   |||| |||| ||||||| |||  |||  |||||| |    
T  12013943 gggcccaatattgaactggacaagggtggcata--ctatgcattgtgttcaatatagacattctggcagaaggataattatgcacaagatttttatcaca 12013846  T
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
     |||||||| |||||||||||||||||||||||||      ||| |||||| | ||||||||||  |||||||||||||||||||||||||    
T  12013845 taaaggttt-gtcagatcacatgacattctcgtca------tagtagtgatatattgctagataatgctcactgtttataatattaaatat 12013762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 10852146 - 10852062
Alignment:
Q  119 atcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||| |||||| ||| ||| |||||| ||||||||| ||||||||||||||| |||||||||||||||| ||| ||||||    
T  10852146 atcacatgatattctcatcaattgagtagcaatgatgtgtttctagataccgctcacggtttataatattaaatgtgtcatttaa 10852062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 35935924 - 35935992
Alignment:
Q  135 gtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||| || |||||||||||||||||||| ||| |||||||| ||||||||||  |||||||    
T  35935924 gtcacttgggtaacaatgatgtgttgctagataccgttcattgtttatattattaaatattagatttaa 35935992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 24301538 - 24301466
Alignment:
Q  8 ccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaa 80  Q
    |||||||||||||| |||||| |||||| ||||||| |||  |||||||||| |||||||| | |||||||||    
T  24301538 ccaatattgaactaaacaagggtgacactgtctatgtctttggttcaatataaacatgaggtccaaagggtaa 24301466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 188; Significance: 1e-102; HSPs: 3)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 6591 - 6392
Alignment:
Q  4 gggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcata 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |    
T  6591 gggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcaca 6492  T
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6491 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 6392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 13610 - 13408
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  13610 tacgggcccaatattgaacaagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 13511  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13510 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 13411  T
Q  201 taa 203  Q
    |||    
T  13410 taa 13408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 5946 - 5911
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  5946 gtgatcagaaagatttctgctacaaaggttctgctc 5911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6094670 - 6094872
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||    
T  6094670 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaaaggtaattatacacatgatcattatc 6094769  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094770 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 6094869  T
Q  201 taa 203  Q
    |||    
T  6094870 taa 6094872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21941212 - 21941414
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  21941212 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 21941311  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21941312 acagaaaggtttcgacagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 21941411  T
Q  201 taa 203  Q
    |||    
T  21941412 taa 21941414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15326745 - 15326947
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  15326745 tacgggcccaatattgaactagacaaggatggcacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgaacattatc 15326844  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    |  |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15326845 acggaaatgtttcgtcagatcacatgacattctcgtcactttggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatacgtgatt 15326944  T
Q  201 taa 203  Q
    |||    
T  15326945 taa 15326947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15507114 - 15507316
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  15507114 tacgggcccaatattgaactagacaaggatggcacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgaacattatc 15507213  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    |  |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15507214 acggaaatgtttcgtcagatcacatgacattctcgtcactttggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatacgtgatt 15507313  T
Q  201 taa 203  Q
    |||    
T  15507314 taa 15507316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 28548594 - 28548786
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  28548594 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgaacattatc 28548693  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    |  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28548694 acggaaaggtttcgtcagatcaaatgacattctcgtcacttgggtaacagtgatgtgttgctagataccgctcactgtttataatattaaata 28548786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 24643195 - 24643396
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||| |  |||| ||||||||| |||||||||||||||||| |||||||||||    
T  24643195 tacgggcccaatat-gaactagacaaggatgacacggtctatgccatgtgtaccgtatagacatgagggaaaaagggtaattatacacatgatcattatc 24643293  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    |  |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  24643294 acggaaaggtttcctcagatcacatgacattctcgtcacttgggtagaagtgatgtgttgctagataccgtttactgtttatagtattaaatatgtgatt 24643393  T
Q  201 taa 203  Q
    |||    
T  24643394 taa 24643396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 22172037 - 22172193
Alignment:
Q  5 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatag 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||    
T  22172037 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacag 22172136  T
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgc 161  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  22172137 aaaggttttgtcagatcatatgacattctcgtcacttgggtagcattgatgtattgc 22172193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 24796658 - 24796463
Alignment:
Q  5 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatag 104  Q
    ||||||||||||||||| |||||| ||||| | |  |||| |||||||||||||| |||||| | ||||||| ||||||||||| |||||||||||  |     
T  24796658 ggcccaatattgaactaaacaagggtgacatgtt--atgcattgtgttcaatataaacatgaag-caaaaggataattatacacatgatcattatctcaa 24796562  T
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||||||| ||||||||||||||  || || |||||||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  24796561 aaaggtttcgtcagatcacatgaaattctcgtcacttgcatatcactgatgtgtggctagatatcgctcactatttataatattaaatatgtgatttaa 24796463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 26241027 - 26241153
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  26241027 gtaattgtacacatgagtattatcatggaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 26241126  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  26241127 gtttataatattaaatatcagatttaa 26241153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 25611756 - 25611852
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  25611756 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttataatattaaat 25611852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 8370983 - 8370887
Alignment:
Q  107 aggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  8370983 aggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttataatattaaatatcagatttaa 8370887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 27007259 - 27007152
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  27007259 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaatat 27007161  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  27007160 tagatttaa 27007152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 27014402 - 27014295
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  27014402 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaatat 27014304  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  27014303 tagatttaa 27014295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 21969876 - 21970001
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| |||||||||  |||||||| |||||||||||||||||||| ||| ||||| ||||||||| ||||| || ||||||||||||||||||||| |    
T  21969876 gtaattgtacacgtgaatattatcat-gaaaggtttcgtcagatcacttgatattcttgtcacttggatagcaatggtgtgttgctagataccgctcaat 21969974  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  21969975 gtttataatattaaatatcagatttaa 21970001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 22659254 - 22659128
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||| ||||||||||||||| ||||||||| ||||||||||||| | |||||||||||||||||||||||| |    
T  22659254 gtaattgtacacatgagtattatcatggaaaagtttcgtcagatcacttgacattcttgtcacttgggtagaaatgatgtgttgctagataccgctcatt 22659155  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||| ||||||||||  |||||||    
T  22659154 gtttatagtattaaatattagatttaa 22659128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 22130376 - 22130244
Alignment:
Q  70 caaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagatacc 169  Q
    |||| |||||||||||||| |    |||||||| |||||||||||||||||||| ||||| ||| ||||||||||||||  |||||||||||||||||||    
T  22130376 caaaggggtaattatacacatatgtattatcat-gaaaggtttcgtcagatcacttgacactcttgtcacttgggtagccatgatgtgttgctagatacc 22130278  T
Q  170 gctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||| |||||||||||||||||||  |||||||    
T  22130277 gctcattgtttataatattaaatattagatttaa 22130244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 27880229 - 27880133
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  27880229 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaat 27880133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 28020410 - 28020314
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  28020410 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaat 28020314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 8967956 - 8967813
Alignment:
Q  9 caatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggc--aaaagggtaattatacacgtgatcattatcatagaa 106  Q
    ||||||||| |||||||||| | |||||||||||| |||||| |||||||| ||||||||||  ||||| |||||||||| | |||| ||||||| | ||    
T  8967956 caatattgacctagacaagggtaacacggtctatgtcttgtgatcaatatagacatgagggcaaaaaagagtaattatacgcatgattattatcacaaaa 8967857  T
Q  107 aggtttcgtcagatcacatgacattctcgtcacttgggtagcag 150  Q
    || |||  ||||||||||||||||||||| ||||||||||||||    
T  8967856 agatttaatcagatcacatgacattctcgccacttgggtagcag 8967813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 191
Target Start/End: Complemental strand, 14979133 - 14978953
Alignment:
Q  8 ccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa 107  Q
    ||||||||||||| ||||||| |||||    |||||| |||||||| || || |||||||| |||||| ||||||||| ||   ||| |||||| | |||    
T  14979133 ccaatattgaactggacaagggtgacata--ctatgcattgtgttctatgtagacatgaggacaaaagagtaattatatacaatatcgttatcacaaaaa 14979036  T
Q  108 ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaa 191  Q
    ||||| |||| ||||| |||||||||||||| || ||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  14979035 ggttt-gtcatatcacttgacattctcgtcatttaggtagcagtgacgtgtatctagataccgctcactgtttataatattaaa 14978953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 6431428 - 6431555
Alignment:
Q  77 gtaattatacacgtgatcattatcat-agaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| | || |||||||| | ||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||     
T  6431428 gtaattttacacataattattatcatgaaaaaggtttcgtcagatcacttgacattcttgtcacttaggtagcaatgatgtgttgctagataccgctcat 6431527  T
Q  176 tgtttataatattaaatatgtgatttaa 203  Q
    |||||||| ||||||||||  |||||||    
T  6431528 tgtttatagtattaaatattagatttaa 6431555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 21917236 - 21917333
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||    
T  21917236 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagacaccgctcattgtttatgatattaaata 21917333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 193
Target Start/End: Complemental strand, 8781674 - 8781518
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag-gtttcgtcagatcacatgacattctcgt 136  Q
    |||||| ||||||||||||||| | |||||| |||||  |||||| | ||| | | ||||||||  ||||  ||||||| ||||||| ||||||||| ||    
T  8781674 tctatgtcttgtgttcaatatagatatgaggacaaaaaagtaattgtgcacatcaacattatcaaggaaaatgtttcgttagatcacttgacattcttgt 8781575  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    |||||||| | ||||||||||||||||||||||||||  ||||||||||||||||||    
T  8781574 cacttgggaatcagtgatgtgttgctagataccgctcgttgtttataatattaaata 8781518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 45534007 - 45533908
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| ||||  |||||||    
T  45534007 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattagatattagatttaa 45533908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 18835887 - 18836005
Alignment:
Q  77 gtaattatacacgtgatcattatcat-agaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| |||  |||||||| | ||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||||   |||     
T  18835887 gtaattgtacacatgaatattatcatgaaaaaggtttcgtcaaatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagatactagtcat 18835986  T
Q  176 tgtttataatattaaatat 194  Q
    |||||||||||||||||||    
T  18835987 tgtttataatattaaatat 18836005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 166
Target Start/End: Complemental strand, 20535009 - 20534880
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag-gtttcgtcagatcacatgacattctcgt 136  Q
    ||||||||||||| |||||||| | |||||| |||| |  ||||||| ||| ||| ||||||||| ||||  ||||||||||||||  ||||||||| ||    
T  20535009 tctatgccttgtgatcaatatagatatgaggacaaaggaataattatgcacatgaacattatcatggaaaatgtttcgtcagatcatttgacattcttgt 20534910  T
Q  137 cacttgggtagcagtgatgtgttgctagat 166  Q
    |||||||||||||||||  |||||||||||    
T  20534909 cacttgggtagcagtgaaatgttgctagat 20534880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 2962692 - 2962565
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| | || |||||||| |||| |||||||| ||||||| ||||||||| ||||||||||||||| |||||||||| ||||||| |||||     
T  2962692 gtaattgtacacataattattatcatggaaaaggtttcgttagatcacttgacattcttgtcacttgggtagcaatgatgtgttgttagatactgctcat 2962593  T
Q  176 tgtttataatattaaatatgtgatttaa 203  Q
    | |||||| || |||||||  |||||||    
T  2962592 tatttatagtaataaatattagatttaa 2962565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 193
Target Start/End: Complemental strand, 32872465 - 32872318
Alignment:
Q  46 ttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggt 145  Q
    ||||||| |||||| |||||| || |||||||||||||| ||| || | |||||||   |||||| |||||||||||  ||||||| |  ||||||  ||    
T  32872465 ttgtgttaaatatagacatgatggaaaaagggtaattatgcacatgtttattatcacgaaaaggtgtcgtcagatcatgtgacatttttatcactttagt 32872366  T
Q  146 agcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    ||||||||||||||| ||||||||  |  || ||||||||||||||||    
T  32872365 agcagtgatgtgttgttagatacctattgctctttataatattaaata 32872318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 2375622 - 2375767
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcac 139  Q
    ||||| ||||||||||||||  || || |||||||| |||||||||| |  |||  |||||| | ||| |||| || | ||||| |||||||||  || |    
T  2375622 tatgctttgtgttcaatatag-cacgatggcaaaagagtaattatactcaagattgttatcacaaaaaagttttgtgaaatcacgtgacattcttctcgc 2375720  T
Q  140 ttgggtagcagtgatgtgttgctagataccgctcactgtttataata 186  Q
     |||||||||||||||||||  |||||||| |||| |||||||||||    
T  2375721 gtgggtagcagtgatgtgttcttagataccactcattgtttataata 2375767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 17083728 - 17083842
Alignment:
Q  9 caatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag 108  Q
    ||||||| ||||||||| |||||||| ||| ||||||||||||||||| || |||| |  | ||||||||||| ||| ||   ||||||||||  ||||     
T  17083728 caatattaaactagacagggatgacatggtgtatgccttgtgttcaatgtagacattaaagaaaaagggtaatcataaac--aatcattatcaaggaaat 17083825  T
Q  109 gtttcgtcagatcacat 125  Q
    |||| || |||||||||    
T  17083826 gttttgttagatcacat 17083842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 27098821 - 27098688
Alignment:
Q  12 tattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatag-aaaggt 110  Q
    |||||| ||| |||||| ||||||  |||||| |||||||||||||||   || |  | ||| | |||||||||||| ||||||||||||  | ||| ||    
T  27098821 tattgagctatacaagggtgacacaatctatgtcttgtgttcaatatagttataaaagaaaatgtgtaattatacacatgatcattatcacggaaaaagt 27098722  T
Q  111 ttcgtcagatcacatgacattctcgtcacttggg 144  Q
    ||| | |||||||||||||||| ||| |||||||    
T  27098721 ttcattagatcacatgacattcccgtaacttggg 27098688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 21941837 - 21941872
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  21941837 gtgatcagaaagatttctgctacaaaggttctgctc 21941872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 29645894 - 29645957
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatca 101  Q
    |||||||||||||||||||||| |||||| |  ||||| |||||||||||  | ||||||||||    
T  29645894 tctatgccttgtgttcaatatagacatgatgataaaagagtaattatacaaattatcattatca 29645957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15152990 - 15153192
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  15152990 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 15153089  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15153090 acagaaaggtttcgtcagatcacatgactttctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 15153189  T
Q  201 taa 203  Q
    |||    
T  15153190 taa 15153192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 29328331 - 29328533
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  29328331 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 29328430  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29328431 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagcgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 29328530  T
Q  201 taa 203  Q
    |||    
T  29328531 taa 29328533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12751373 - 12751575
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| ||||||    
T  12751373 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaaggataattatacacatgattattatc 12751472  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12751473 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgcttataatattaaatatgtgatt 12751572  T
Q  201 taa 203  Q
    |||    
T  12751573 taa 12751575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 11542640 - 11542438
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  11542640 tacgggcccaatattgaacttgacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaaggataattatacacatgatcattatc 11542541  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11542540 acagaaaggtttcgtcagatcacatgacattcccgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 11542441  T
Q  201 taa 203  Q
    |||    
T  11542440 taa 11542438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 11535722 - 11535520
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  11535722 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtattcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 11535623  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11535622 acagaaaggtttcgtcagatcacatgacattcccatcacttggatagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 11535523  T
Q  201 taa 203  Q
    |||    
T  11535522 taa 11535520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18561545 - 18561747
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||| |||||||    
T  18561545 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacataagggcaaaagggtaattatacatatgaacattatc 18561644  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18561645 acagaaaagtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 18561744  T
Q  201 taa 203  Q
    |||    
T  18561745 taa 18561747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12739083 - 12739283
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||| |||||||||||    
T  12739083 tacgggaccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagac--gagggaaaaagggtaattatacacatgatcattatc 12739180  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||| ||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12739181 acagaaaggtttcgtcagatctcattactttttcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 12739280  T
Q  201 taa 203  Q
    |||    
T  12739281 taa 12739283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 13392697 - 13392898
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||||||||||||||||| ||||| | |  ||| | ||||||||||||| |||||||||| |||||||||||||||||   | |||||||    
T  13392697 tacgggcccaatattgaactagacaagggtgacatgtt--atgtcctgtgttcaatatagacatgagggcgaaagggtaattatacacacaaacattatc 13392794  T
Q  101 atagaaa-ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgat 199  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13392795 acagaaaaggtttcgtcagatcacatgacattctcgtcacttgggtagaagtgatgtgttgctagataccactcactgtttataatattaaatatgtgat 13392894  T
Q  200 ttaa 203  Q
    ||||    
T  13392895 ttaa 13392898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 82 - 203
Target Start/End: Complemental strand, 24851138 - 24851017
Alignment:
Q  82 tatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgttta 181  Q
    ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24851138 tatacacatgatcattatcacagaaaggtttcgtcagatcatatgacattctcgtcacttgggtagcaatgatgtgttgctagataccgctcactgttta 24851039  T
Q  182 taatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||||||    
T  24851038 taatattaaatatgtgatttaa 24851017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 11546560 - 11546418
Alignment:
Q  41 atgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcact 140  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| | | |||| ||||||||||||| |||||||||||||||||    
T  11546560 atgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattattacataaagttttcgtcagatcatatgacattctcgtcact 11546461  T
Q  141 tgggtagcagtgatgtgttgctagataccgctcactgtttata 183  Q
    ||| || |||||||||||||||| ||||| |||||||||||||    
T  11546460 tggataacagtgatgtgttgctaaataccactcactgtttata 11546418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 8465542 - 8465667
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||||||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  8465542 gtaattatacacatgaatattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 8465640  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  8465641 gtttataatattaaatatcagatttaa 8465667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 24443177 - 24443011
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag-gtttcgtcagatcacatgacattctcgt 136  Q
    ||||||||||||| |||||||| | | || | |||||| |||||| ||||| | | ||||||||| ||||  ||||||||||||||| | ||||||||||    
T  24443177 tctatgccttgtgatcaatatagatacgaagacaaaagagtaattgtacacattaacattatcatggaaaatgtttcgtcagatcacttaacattctcgt 24443078  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  |||||||    
T  24443077 cacttgggtagcagtgatgtcttgttagataccgctcactgtttataatattaaatataagatttaa 24443011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 15169109 - 15168928
Alignment:
Q  23 acaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag-gtttcgtcagatc 121  Q
    ||||||||||||   ||||||||||||||||| |||| | |||||| |||| | |||||| ||||| | |  |||||||| ||||  |||||||||||||    
T  15169109 acaaggatgacaaaatctatgccttgtgttcagtataaatatgaggacaaaggagtaattgtacacattaatattatcatggaaaaagtttcgtcagatc 15169010  T
Q  122 acatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    || ||||||||| |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||  |||||||    
T  15169009 acttgacattcttgtcacttgggtagcagtgatgtattgctagatactgatcactgtttataatattaaatataagatttaa 15168928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 18257393 - 18257199
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaagg 109  Q
    |||||||| ||| ||||||||||||   ||||| ||||||  |||||||| | | |||| |||| | |||||| ||||| |||  ||||| || ||||||    
T  18257393 aatattgatctatacaaggatgacaaaatctataccttgtaatcaatatagatacgaggacaaaggagtaattgtacacatgaatattattatggaaagg 18257294  T
Q  110 tttcgtcagatcacatgacattctcgtcactt-gggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||| |||||||||| ||||||||| ||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  18257293 ttttgtcagatcacttgacattcttgtcactttgggtagcaatgatgtgttgctagataccgctcattgtttataatattaaatataggatttaa 18257199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 18400639 - 18400771
Alignment:
Q  70 caaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagatacc 169  Q
    |||| |||||||||||||| |    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||    
T  18400639 caaaggggtaattatacacatatgtattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagccatgatgtgttgctagatacc 18400737  T
Q  170 gctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||| |||||||||||||||||||  |||||||    
T  18400738 gctcattgtttataatattaaatattagatttaa 18400771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 18407623 - 18407755
Alignment:
Q  70 caaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagatacc 169  Q
    |||| |||||||||||||| |    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||    
T  18407623 caaaggggtaattatacacatatgtattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagccatgatgtgttgctagatacc 18407721  T
Q  170 gctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||| |||||||||||||||||||  |||||||    
T  18407722 gctcattgtttataatattaaatattagatttaa 18407755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 48808238 - 48808131
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  48808238 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaatat 48808140  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  48808139 tagatttaa 48808131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 47166627 - 47166493
Alignment:
Q  70 caaaagggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagatac 168  Q
    |||||| |||||| ||||| | || |||||||| |||| |||||||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  47166627 caaaagagtaattgtacacataattattatcatggaaaaggtttcgttagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagatac 47166528  T
Q  169 cgctcactgtttataatattaaatatgtgatttaa 203  Q
     ||||| |||||||||||||||||||  |||||||    
T  47166527 tgctcattgtttataatattaaatattagatttaa 47166493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 18139080 - 18138973
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||    
T  18139080 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattaaatat 18138982  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  18138981 tagatttaa 18138973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 30254698 - 30254805
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  30254698 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacgtgggtagcaatgatgtgttgctagataccgctcattgtttatagtattaaatat 30254796  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  30254797 tagatttaa 30254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 25845351 - 25845156
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag- 108  Q
    |||||||| ||| |||||||||||||   ||||| ||||||||| ||||| | |||||| |||| | |||| ||||| | ||| ||||||||| ||||      
T  25845351 aatattgagctatacaaggatgacacaagctatgtcttgtgttcgatataaatatgaggacaaaggagtaactatacgcatgaacattatcatggaaaaa 25845252  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact-gtttataatattaaatatgtgatttaa 203  Q
    ||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||||| | ||||| | |||| |||||||||||||  |||||||    
T  25845251 gtttcgtcatatcacttgactttcttgtcacttgggtagcagtgatgtgttgctagatgctgctcattagtttctaatattaaatataagatttaa 25845156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 18258855 - 18258757
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||||||||||||| |||||||| ||||||||||  |||||||    
T  18258855 aaaggtttcgtcagatcacttgacattcttgtcacttgggtaacaatgatgtgttgctagataccgctcattgtttatagtattaaatattagatttaa 18258757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 41680728 - 41680602
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||  ||||||| ||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||| |    
T  41680728 gtaattgtacacatgagtattatcatggaaagtcttcgtcatatcacttgacattcttgtcacttgggtagcaatgatatgttgctagataccgctcatt 41680629  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  41680628 gtttataatattaaatattagatttaa 41680602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 2205112 - 2205208
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaat 192  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||||||    
T  2205112 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgctgctagataccgctcattgtttatgatattaaat 2205208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 19231423 - 19231556
Alignment:
Q  70 caaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagatacc 169  Q
    |||||| |||||| || || |||  |||||||| ||||||||| |||||||||| ||||||||| |||||||||||||||  ||||||||||||||||||    
T  19231423 caaaagagtaattgtagacatgagtattatcatggaaaggttttgtcagatcacttgacattcttgtcacttgggtagcaaagatgtgttgctagatacc 19231522  T
Q  170 gctcactgtttataatattaaatatgtgatttaa 203  Q
     |||| |||||||| ||||||||||  |||||||    
T  19231523 actcattgtttatattattaaatattagatttaa 19231556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 15730319 - 15730418
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| ||||  |||||||    
T  15730319 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattagatattagatttaa 15730418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 19393226 - 19393061
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgt 136  Q
    ||||||||||||| |||||||| | || ||| |||| | |||||||||||| |||  |||||||| |||| |||||| ||||||||| |||||||||  |    
T  19393226 tctatgccttgtgatcaatatagatattaggacaaaggagtaattatacacatgaatattatcatggaaaaggtttcatcagatcacttgacattcttct 19393127  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||| ||||| ||||||||||||||||||| |||| | |||||| ||||||||||  |||||||    
T  19393126 cacttggatagcaatgatgtgttgctagatacccctca-tttttatagtattaaatattagatttaa 19393061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 194
Target Start/End: Original strand, 7396794 - 7396948
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcac 139  Q
    |||||||| ||||||||||| ||||||||| ||||  |||||||||||   ||| ||||| || ||||| |||||| | ||||||||||||||| ||||     
T  7396794 tatgccttctgttcaatatagacatgagggtaaaatagtaattatacataagattattattatggaaagatttcgttatatcacatgacattcttgtcat 7396893  T
Q  140 ttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    || ||||||||| ||||||||||| ||   |||||| |||||||||| |||||||    
T  7396894 ttaggtagcagtaatgtgttgctacatcgggctcacagtttataataataaatat 7396948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 34129144 - 34129242
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||| ||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||  |||||||    
T  34129144 aaaggtttcgtcatatcacttgacattcttgtcacttggatagcaatgatgtgttgctagataccgctcattggttatattattaaatattagatttaa 34129242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 12393171 - 12393297
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||||||||| ||| ||||||||   ||| ||||||||| ||||| | | ||||| ||||||| |||| || ||||||||||||||||| | ||||||    
T  12393171 gtaattatacacatgaacattatcacgaaaatgtttcgtcatatcacttaagattcttgtcacttaggtaacaatgatgtgttgctagatatctctcact 12393270  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    |||| |||||||||||||  |||||||    
T  12393271 gtttgtaatattaaatataagatttaa 12393297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 28131036 - 28131230
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-g 108  Q
    |||||||| ||| |||||| |||||   ||||||||||| | |||||||| | || ||| |||| | ||||| |||||| | |  |||||||| |||| |    
T  28131036 aatattgatctatacaagggtgacaaaatctatgccttgagatcaatatagatattaggacaaatgagtaatcatacacataagtattatcatggaaaag 28131135  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||| ||||| ||||||||| |||||||||||| ||   |||||| | ||||||||||||| |||||||  ||||||||||  |||||||    
T  28131136 gtttcgtcatatcacttgacattcttgtcacttgggtaacaactatgtgtcgttagataccgctcattgtttattctattaaatattagatttaa 28131230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 19389034 - 19389229
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcat--agaaa 107  Q
    |||||||| | | |||||| ||||||  |||||| ||| ||||||||||| | || |||  ||| | |||||| || || ||| ||||||| |  | |||    
T  19389034 aatattgagccatacaagggtgacacaatctatgtcttatgttcaatatagatattaggagaaatgagtaattttaaacatgaacattatcttggaaaaa 19389133  T
Q  108 ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||| ||||| ||||||||| ||||||||||||||  |||||||| |||| |||   || |||||||||||||||||||||  |||||||    
T  19389134 ggtttcgtcatatcacttgacattcttgtcacttgggtagccttgatgtgtagctaaatataacttactgtttataatattaaatataagatttaa 19389229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 5982475 - 5982399
Alignment:
Q  68 ggcaaaagggtaattatacacgtgatcattatcatag-aaaggtttcgtcagatcacatgacattctcgtcacttgg 143  Q
    |||||| |||||||||||||| |||||||||||| || ||||||||| ||| |||||||||||||||  ||||||||    
T  5982475 ggcaaacgggtaattatacacatgatcattatcacagaaaaggtttcttcatatcacatgacattcttatcacttgg 5982399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 194
Target Start/End: Original strand, 39112386 - 39112536
Alignment:
Q  45 cttgtgttcaatatatacatgagggcaaa-agggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgg 143  Q
    ||||||||||||||| ||| ||||||||| | |  |||||||||| | ||| ||||||   | ||||||||||| |||| |||||||| | || ||||||    
T  39112386 cttgtgttcaatataaacacgagggcaaagatgaaaattatacacataatcgttatcacgaagaggtttcgtcaaatcaaatgacattattgttacttgg 39112485  T
Q  144 gtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
     || || | ||||||||||||||||| |  | | |||||||||||||||||    
T  39112486 atatcatttatgtgttgctagataccacctattctttataatattaaatat 39112536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 10668661 - 10668558
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  ||||||||  ||| |||||||||||||||| |||||||| |||||||||   |||   ||||||||||||||||| |||| |    
T  10668661 gtaattgtacacatgaatattatcatgaaaaagtttcgtcagatcacaagacattcttgtcacttggtaggca---atgtgttgctagatacctctcatt 10668565  T
Q  177 gtttata 183  Q
    |||||||    
T  10668564 gtttata 10668558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 12410113 - 12410165
Alignment:
Q  151 tgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||    
T  12410113 tgatgagttgctagataccgctcactgtttgtaatattaaatataagatttaa 12410165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 16011916 - 16012096
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatag-aaag 108  Q
    |||||||| ||| |||||| |||||   ||||||||||||| |||||||||| |||||| ||||    ||| ||||||| |||  |||||||| | ||||    
T  16011916 aatattgatctatacaagggtgacaatatctatgccttgtgatcaatatatatatgaggacaaagaaataactatacacatgaatattatcatggaaaag 16012015  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatatta 189  Q
    |||||  || ||||| |||||| || ||||||| | ||| | |||| ||||  ||||||  ||||| ||||||||||||||    
T  16012016 gtttccacatatcacttgacatacttgtcacttagatagaaatgatatgttattagatagtgctcattgtttataatatta 16012096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 47833621 - 47833426
Alignment:
Q  9 caatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattat----catag 104  Q
    ||||| |||||| ||||||||||||||  |  ||| ||| ||||| |||||||||| |||| |||||||| |||||||| |  | |||| |    ||||     
T  47833621 caatactgaactggacaaggatgacacatt--atgtcttttgttcgatatatacataagggtaaaagggtgattatacatgaaaacattttattacatac 47833524  T
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgct-cactgtttataatattaaatatgtgatttaa 203  Q
    |||  ||| |||| ||||||| ||||||||||||||| | ||| |||||||| ||| |  ||||| || |||||||||||||||||||| ||| ||||||    
T  47833523 aaa--ttttgtcaaatcacataacattctcgtcactttgatagtagtgatgtattgttgaataccccttcactgtttataatattaaatgtgttatttaa 47833426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 31190191 - 31190093
Alignment:
Q  52 tcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaagg-tttcgtcagatcacatgacattctcgtcacttgggtagca 149  Q
    |||||||| | |||||| |||| | |||||| ||||| |||  |||||||| |||| | ||||||| |||||| ||||||||| |||||||||||||||    
T  31190191 tcaatatagatatgaggacaaaggagtaattgtacacatgaatattatcatggaaaagatttcgtcggatcacttgacattcttgtcacttgggtagca 31190093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 203
Target Start/End: Complemental strand, 23387850 - 23387718
Alignment:
Q  71 aaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccg 170  Q
    |||| ||||||||||||| |||| ||||||| | |||  |||  ||||| ||||||||||||| ||||||||| || || |||||| |   || ||||      
T  23387850 aaaaaggtaattatacacatgataattatcacataaatattttttcagaccacatgacattcttgtcacttggataacaatgatgtttctttatatactt 23387751  T
Q  171 ctcactgtttataatattaaatatgtgatttaa 203  Q
    |||| |||| |||||||||||| ||| ||||||    
T  23387750 ctcattgttaataatattaaatgtgtaatttaa 23387718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 31190062 - 31190014
Alignment:
Q  146 agcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||| |||| ||||||| ||||||||||| |||||||||||||||||||    
T  31190062 agcaatgatttgttgctggataccgctcattgtttataatattaaatat 31190014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 2653025 - 2652990
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  2653025 gtgatcagaaagatttctgctacaaaggttctgctc 2652990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 14592463 - 14592561
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||| ||| ||||| || ||| || ||||||| ||||  | |||| |||| ||| |||| ||||| |||||||||||||||||||  |||||||    
T  14592463 aaaggtttcctcatatcacttggcatacttgtcacttaggtaaaaatgatatgttactaaatactgctcattgtttataatattaaatattagatttaa 14592561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 26146997 - 26146890
Alignment:
Q  25 aaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcataga-aaggtttcgtcagatcac 123  Q
    |||||||||||  |||||| |||||| |||||||   ||| ||| ||||  ||||||||||||| |||||||||||| | | || |||||||| |||||     
T  26146997 aaggatgacacaatctatgtcttgtggtcaatat---cataaggacaaataggtaattatacacatgatcattatcacatataaagtttcgtccgatcat 26146901  T
Q  124 atgacattctc 134  Q
    |||||| ||||    
T  26146900 atgacaatctc 26146890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 24701882 - 24701680
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  24701882 tacgggcccaatattgaactagacaaggatggcacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 24701783  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24701782 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 24701683  T
Q  201 taa 203  Q
    |||    
T  24701682 taa 24701680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 24695118 - 24694916
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  24695118 tacgggcccaatattgaactagacaaggatggaacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 24695019  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695018 acagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 24694919  T
Q  201 taa 203  Q
    |||    
T  24694918 taa 24694916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19714158 - 19713956
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||    
T  19714158 tacgggcccaatattgaactatacaaggatgacacggtctatgccttgtgtttaatatagacatgagggcaaaagggtaattatacacatgatcattatc 19714059  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714058 acataaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 19713959  T
Q  201 taa 203  Q
    |||    
T  19713958 taa 19713956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19706879 - 19706677
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  19706879 tacgggcccaatattgaactagacaaggacgacacggtctatggcttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 19706780  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19706779 acagaaaggtttcatcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcagtgtttataatattaaatatgtgatt 19706680  T
Q  201 taa 203  Q
    |||    
T  19706679 taa 19706677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18568158 - 18567958
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||  |||||||| |||||||| ||||||||||||||||||| ||||||||||     
T  18568158 tacgggcacaatattgaactaggcaaggatgacatggtctatgccttgt--tcaatatagacatgaggacaaaagggtaattatacacatgatcattatt 18568061  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | | |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18568060 acataaaggtttggtcagatcacatgacattctcgtcacttgggtagccgtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 18567961  T
Q  201 taa 203  Q
    |||    
T  18567960 taa 18567958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 203
Target Start/End: Original strand, 39539134 - 39539297
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcac 139  Q
    |||||||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||| | ||| ||||||||||||||||||| |||||||||||    
T  39539134 tatgccttgtgttcaatatagacatgagtgcaaaatgataattatacacatgatcattttcacataaatgtttcgtcagatcacatgatattctcgtcac 39539233  T
Q  140 ttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  39539234 ttgggtagcggtgttgtgttgctagataccgctaactatttataatattaaatatgtgatttaa 39539297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 25805144 - 25805019
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||||||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  25805144 gtaattatacacatgaatattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 25805046  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  25805045 gtttataatattaaatatcagatttaa 25805019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 203
Target Start/End: Complemental strand, 17298525 - 17298362
Alignment:
Q  39 ctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtca 138  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||| |    ||| |||||| | ||| ||||||||| ||||| |||||||||  |||    
T  17298525 ctatgccttgtgttcaatatagacatgagggaaaaatggtaattatatataacatcgttatcacataaaagtttcgtcaaatcacttgacattctt-tca 17298427  T
Q  139 cttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  17298426 cttggatagcagtgatgtgttgctagacaccgctcactgtttataatattaaatataagatttaa 17298362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 28719414 - 28719234
Alignment:
Q  2 acgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatca 101  Q
    ||||| |||||||| |||||||||||| ||||     ||||| ||||||||||||||| ||||||||| ||||| || ||||||||| ||||||||||||    
T  28719414 acgggtccaatattaaactagacaagggtgactta--ctatgtcttgtgttcaatatagacatgagggaaaaagagttattatacacatgatcattatca 28719317  T
Q  102 tagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataa 184  Q
     | |||||||||||||||| |  ||| ||||| ||||||||||||||| ||||||||||||||||||  |||| |||||||||    
T  28719316 cataaaggtttcgtcagattatttgatattcttgtcacttgggtagcaatgatgtgttgctagatacatctcattgtttataa 28719234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 20941570 - 20941686
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  20941570 gtaattgtacacatgaatattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 20941668  T
Q  177 gtttataatattaaatat 194  Q
    ||||||||||||||||||    
T  20941669 gtttataatattaaatat 20941686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 203
Target Start/End: Complemental strand, 17283080 - 17282916
Alignment:
Q  39 ctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtca 138  Q
    |||||| |||||||||||||| ||||| |||||||| |  ||||||| |    ||| |||||| | ||| ||||||||||||||| ||||||||| ||||    
T  17283080 ctatgcattgtgttcaatatagacatgggggcaaaatgacaattatatataacatcgttatcacataaaagtttcgtcagatcacttgacattcttgtca 17282981  T
Q  139 cttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||| ||||||| || |||||||||||||||||||||||||  |||||||    
T  17282980 cttgggtagcagtgatgtgctgctagacactgctcactgtttataatattaaatattggatttaa 17282916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 22941794 - 22941919
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||||||||||| | ||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  22941794 gtaattgtacacatgaatattatcat-gaaaggtttcgtcagatcactttacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 22941892  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  22941893 gtttataatattaaatatcagatttaa 22941919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 194
Target Start/End: Original strand, 39535694 - 39535851
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgt 136  Q
    ||||||||||||| |||||||| | | |||| |||||| |||||| ||||  |||  |||||||| |||| |||||||||||||||| ||||||||| ||    
T  39535694 tctatgccttgtgatcaatataaatacgaggacaaaagagtaattgtacaaatgaatattatcatggaaaaggtttcgtcagatcacttgacattcttgt 39535793  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||   ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  39535794 cacactggtagcaatgatgtgttgctagataccgctcattgtttataatattaaatat 39535851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 23546482 - 23546589
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  23546482 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaatat 23546580  T
Q  195 gtgatttaa 203  Q
      |||||||    
T  23546581 tagatttaa 23546589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 32459 - 32556
Alignment:
Q  95 attatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  32459 attatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatgatattaaata 32556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 12764750 - 12764623
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| | ||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||     
T  12764750 gtaattgtacacataatcattatcatggaaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcat 12764651  T
Q  176 tgtttataatattaaatatgtgatttaa 203  Q
    | |||||| || |||||||  |||||||    
T  12764650 tatttatagtaataaatattagatttaa 12764623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 5098219 - 5098317
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||  |||||||    
T  5098219 aaaggttccgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatagtattaaatattagatttaa 5098317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 31097358 - 31097484
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||| ||||| ||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||| |    
T  31097358 gtaattgtacacatgagtattatcatggaaaagtttcatcatatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgttcatt 31097457  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  31097458 gtttataatattaaatatcggatttaa 31097484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 182
Target Start/End: Original strand, 26245576 - 26245749
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaag- 108  Q
    |||||||| ||| |||||| |||||   ||||||||||| | |||||||| | || ||| |||| | |||||| ||||| | |  |||||||| ||||      
T  26245576 aatattgatctatacaagggtgacaatatctatgccttgagatcaatatagatattaggacaaaggagtaattgtacacataaatattatcatggaaaaa 26245675  T
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttat 182  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||    
T  26245676 gtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttat 26245749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 9811493 - 9811366
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| | || |||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||     
T  9811493 gtaattgtacacataattattatcatggaaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcat 9811394  T
Q  176 tgtttataatattaaatatgtgatttaa 203  Q
    | |||||| || |||||||  |||||||    
T  9811393 tatttatagtaataaatattagatttaa 9811366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 12789397 - 12789298
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| ||||  |||||||    
T  12789397 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattagatattagatttaa 12789298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 24933040 - 24932941
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| ||||  |||||||    
T  24933040 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattagatattagatttaa 24932941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 31651608 - 31651425
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagg-gcaaaagggtaattatacacgtgatcattatcatagaaa- 107  Q
    |||||||| ||| |||||| ||||||    |||| ||||||||||||||| | || | | ||||| |  ||||||||||  | | ||||||||| ||||     
T  31651608 aatattgagctatacaagggtgacacaacatatgtcttgtgttcaatatagatataaagagcaaatgactaattatacatataaacattatcatggaaaa 31651509  T
Q  108 ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaa 191  Q
    ||||||||| |||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  31651508 ggtttcgtcggatcacttgacattcttgtcacttgggtagcaatgatgtgttgttagataccgctcactctttataatattaaa 31651425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 17314533 - 17314439
Alignment:
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||  |||||||    
T  17314533 gtttcgtcagatcacttgacattcttttcacttgggtagcagtgatgtgttgctagacaccgcttattgtttataatattaaatataagatttaa 17314439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 159
Target Start/End: Complemental strand, 20100041 - 20099922
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcac 139  Q
    ||||||||||| |||||||| | |||||| |||| | || ||| | ||| ||| ||||||||| ||||| ||||||||||||| |||||||||| |||||    
T  20100041 tatgccttgtgatcaatataaatatgaggacaaaggagtgattgtgcacatgaacattatcatggaaagatttcgtcagatcatatgacattcttgtcac 20099942  T
Q  140 ttgggtagcagtgatgtgtt 159  Q
    |||||||||| |||||||||    
T  20099941 ttgggtagcaatgatgtgtt 20099922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 7865190 - 7865063
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaag-gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcac 175  Q
    |||||| ||||| | || |||||||| ||||  ||||||||||||||| ||||||||| ||||||||||||||| |||||||||| |||||| ||||||     
T  7865190 gtaattgtacacataattattatcatggaaaatgtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgttagataacgctcat 7865091  T
Q  176 tgtttataatattaaatatgtgatttaa 203  Q
    | |||||| || |||||||  |||||||    
T  7865090 tatttatagtaataaatattagatttaa 7865063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 22546852 - 22546763
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    ||||||||||||| || |||||||||||| ||||||||| ||   ||||||||||| || ||||| |||| | |||||||||||||||||    
T  22546852 aaaggtttcgtcatattacatgacattcttgtcacttggatatgcgtgatgtgttgttacataccactcattatttataatattaaatat 22546763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 200
Target Start/End: Complemental strand, 33476858 - 33476767
Alignment:
Q  109 gtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    ||||| ||| |||| |||| ||||||||||||||  || ||||||||| ||| |||||| | |||||||||||||||| ||||| |||||||    
T  33476858 gtttcatcaaatcaaatgatattctcgtcacttgaataacagtgatgtattgttagatatcactcactgtttataatactaaatgtgtgatt 33476767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 194
Target Start/End: Complemental strand, 18829185 - 18829030
Alignment:
Q  40 tatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgaca-ttctcgtca 138  Q
    ||||||||||||| |||||| ||||  ||||||||  ||||| |||||  | ||| |||||| | | |||||| ||||||||| || | | ||| | |||    
T  18829185 tatgccttgtgtttaatataaacattggggcaaaaaagtaataatacaaatcatcgttatcacatataggttttgtcagatcatatcaaaattcccctca 18829086  T
Q  139 cttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    ||| ||||| |||||||| || |||||| | | ||||| |||| ||||||||||||    
T  18829085 cttaggtagtagtgatgtatttctagatgctggtcactatttacaatattaaatat 18829030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 24694497 - 24694462
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  24694497 gtgatcagaaagatttctgctacaaaggttctgctc 24694462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 24701266 - 24701231
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  24701266 gtgatcagaaagatttctgctacaaaggttctgctc 24701231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 7658 - 7856
Alignment:
Q  5 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatag 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||| ||    
T  7658 ggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatataggcatgagggcaaaagggtaattatacacatgatcattatcacag 7757  T
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7758 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 7856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18834 - 19036
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18834 tacgggcccaatattgaacgagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatc 18933  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18934 acagaaaggtctcgtcaaatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 19033  T
Q  201 taa 203  Q
    |||    
T  19034 taa 19036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 230051 - 229849
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||    
T  230051 tacgggcccaatattgaactagacaaggatgacatggtttatgtcttgtgttcaatatagacataagggcaaaagggtaattatacacatgatcattatc 229952  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | | ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  229951 acataaatgtttcgtcagatcacatgacattctcgtcacttgggtagcaatgatgtgttgctggataccgctcactgtttataatttgaaatatgtgatt 229852  T
Q  201 taa 203  Q
    |||    
T  229851 taa 229849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6069 - 6271
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||| |||||| |||||||||||||||| ||| |||||||||||||||||||||| | || |||||||||| |||||||||||| ||||||||||     
T  6069 tacgggccaaatattcaactagacaaggatgagacgatctatgccttgtgttcaatatagaaataagggcaaaagtgtaattatacacatgatcattatt 6168  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatt 200  Q
    | | |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6169 acataaaggttttgccagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactatttataatattaaatatgtgatt 6268  T
Q  201 taa 203  Q
    |||    
T  6269 taa 6271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 25650 - 25481
Alignment:
Q  1 tacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatc 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  | |||||||||    
T  25650 tacgggcccaatattgaactagacaaggatgacatggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacatataatcattatc 25551  T
Q  101 atagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccg 170  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25550 acataaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtcttgctagataccg 25481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 5777 - 5679
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5777 aaaggtttcgtcatatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 5679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 266 - 168
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  266 aaaggtttcgtcatatcacatgacattctcgtcacttggttagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 705 - 830
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||||||   |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  705 gtaattgtacacgtgcatattatcat-gaaaggattcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 803  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  804 gtttataatattaaatatcagatttaa 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 726 - 851
Alignment:
Q  77 gtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcact 176  Q
    |||||| ||||| |||  |||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |    
T  726 gtaattgtacacatgaatattatcat-gaaaggtttcgtaagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcatt 824  T
Q  177 gtttataatattaaatatgtgatttaa 203  Q
    ||||||||||||||||||  |||||||    
T  825 gtttataatattaaatatcagatttaa 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 120265 - 120397
Alignment:
Q  70 caaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagatacc 169  Q
    |||| |||||||||||||| |    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||    
T  120265 caaaggggtaattatacacatatgtattatcat-gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagccatgatgtgttgctagatacc 120363  T
Q  170 gctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||| |||||||||||||||||||  |||||||    
T  120364 gctcattgtttataatattaaatattagatttaa 120397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 12749 - 12583
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgt 136  Q
    ||||||||||| | |||||||  | || ||| |||| | |||||| ||||| | |  ||||||||||||| |||||||||||||||| ||||||||| ||    
T  12749 tctatgccttgagatcaatatcgatattaggacaaaggagtaattgtacacataaatattatcatagaaaaggtttcgtcagatcacttgacattcttgt 12650  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||  |||||||    
T  12649 cacttggttagcaatgatgtgttgctagataccgctcattgtttatagtattaaatattagatttaa 12583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 3409 - 3310
Alignment:
Q  104 gaaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||  |||||||    
T  3409 gaaaggtttcgtcagatcacttgacattcttgtcacttgggtagcaatgatgtgttgctagataccgctcattgtttatggtattaaatattagatttaa 3310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 67140 - 67042
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    ||||||||  ||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||  |||||||    
T  67140 aaaggttttttcagatcacttgacattcttttcacttgggtagcaatgatgtgttgctagataccgctcattgtttatagtattaaatattagatttaa 67042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 39816 - 39630
Alignment:
Q  10 aatattgaactagacaaggatgacacggtctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgt--gatcattatcatagaaa 107  Q
    |||||||| ||| ||||||||||||   |||||| |||||| |||||||| | |||||| |||| | ||||   ||||| |  ||  ||||||||  |||    
T  39816 aatattgatctatacaaggatgacaaaatctatgacttgtgatcaatatagatatgaggacaaaggagtaacagtacacatatgaatattatcatgaaaa 39717  T
Q  108 ggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
     ||||| ||||||||| ||||||||| ||||||||||||||| || ||||||| ||||||| ||||  |||||||||||||||||||    
T  39716 agtttcatcagatcacttgacattcttgtcacttgggtagcaatgttgtgttgttagatactgctcgttgtttataatattaaatat 39630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 24358 - 24511
Alignment:
Q  39 ctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtca 138  Q
    ||||| ||||||||||||| | |||||||||||||| | |||||||| ||   ||| |||||| |  |||||||||||| ||||| ||  || || ||||    
T  24358 ctatgtcttgtgttcaatacaaacatgagggcaaaaagataattataaacaacatctttatcaca-taaggtttcgtcaaatcacttgctatccttgtca 24456  T
Q  139 cttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaata 193  Q
    |||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||    
T  24457 cttgggtaacagtgacgtgttgctagatacccctcagtgtttataatattgaata 24511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 194
Target Start/End: Original strand, 27044 - 27201
Alignment:
Q  38 tctatgccttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcg-tcagatcacatgacattctcgt 136  Q
    ||||||||||||| |||||||| | |||| | |||| | |||||||||||| |||  |||||| |||||| |  ||  ||| ||||  ||||| ||| ||    
T  27044 tctatgccttgtgatcaatatagatatgaagacaaaggagtaattatacacatgagtattatcctagaaaagactctctcaaatcaattgacactcttgt 27143  T
Q  137 cacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    ||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  27144 cacttggttagcaatgatgtgttgctagatacctctcattgtttataatattaaatat 27201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 54333 - 54422
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaatat 194  Q
    |||||||||||||| |||| ||||||||| |||| || ||||||| |||||||||||||||||||||||| |||||||| |||| |||||    
T  54333 aaaggtttcgtcagttcacttgacattcttgtcatttaggtagcaatgatgtgttgctagataccgctcattgtttatagtattgaatat 54422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 167
Target Start/End: Complemental strand, 81597 - 81476
Alignment:
Q  46 ttgtgttcaatatatacatgagggcaaaagggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggt 145  Q
    |||||||||||||| | || |||||||  ||||||||||| || ||||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||    
T  81597 ttgtgttcaatatagatattagggcaattgggtaattataaacatgatcgttatcacggaaaagtttcgttagatcacatgacattctcgtcacttgggt 81498  T
Q  146 agcagtgatgtgttgctagata 167  Q
      || ||| || ||||||||||    
T  81497 gacaatgacgtattgctagata 81476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 108855 - 108769
Alignment:
Q  105 aaaggtttcgtcagatcacatgacattctcgtcacttgggtagcagtgatgtgttgctagataccgctcactgtttataatattaaa 191  Q
    ||||||||| || |||||| ||||||||| || |||||||||||||||||||||| |||||||| ||||| |  |||||||||||||    
T  108855 aaaggtttcctcggatcacttgacattcttgttacttgggtagcagtgatgtgtttctagatactgctcattcattataatattaaa 108769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 29221 - 29186
Alignment:
Q  208 gtgatcagaaagatttctgctacacaggttctgctc 243  Q
    |||||||||||||||||||||||| |||||||||||    
T  29221 gtgatcagaaagatttctgctacaaaggttctgctc 29186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 9701 - 9784
Alignment:
Q  96 ttatcatagaaagg-tttcgtcagatc-acatgacattctcgtcac-ttgggtagcagtgatgtg-ttgc-tagataccgctca 174  Q
    |||||||||||||| |||||||||||| || ||||||||| ||||| |||||||||| ||||||| |||| |||||||||||||    
T  9701 ttatcatagaaaggttttcgtcagatcaacttgacattcttgtcactttgggtagcaatgatgtgtttgcttagataccgctca 9784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 11798 - 11868
Alignment:
Q  75 gggtaattatacacgtgatcattatcatagaaaggtttcgtcagatcacatgacattctcgtcacttgggt 145  Q
    ||||||||||||||  | || ||||  |||||| ||||||||| ||||||||||||| | |||||||||||    
T  11798 gggtaattatacacaaggtcgttattgtagaaatgtttcgtcatatcacatgacatttttgtcacttgggt 11868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 8188 - 8148
Alignment:
Q  163 agataccgctcactgtttataatattaaatatgtgatttaa 203  Q
    |||||||||||| |||||||||||||||||||  |||||||    
T  8188 agataccgctcattgtttataatattaaatatcagatttaa 8148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 15731 - 15799
Alignment:
Q  76 ggtaattatacacgtgatcattatcatagaaa-ggtttcgtcagatcacatgacattctcgtcacttgg 143  Q
    ||||||||||||| ||||  ||||||  |||| |||||||| ||||||||| ||||||| |||||||||    
T  15731 ggtaattatacacatgattgttatcacggaaaaggtttcgttagatcacatcacattcttgtcacttgg 15799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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