View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21585_high_40 (Length: 248)
Name: NF21585_high_40
Description: NF21585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21585_high_40 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 31481488 - 31481704
Alignment:
| Q |
18 |
atgttcatctgctataataagatcttagattatttattgaatgagaaaaacacgagctaagaaagataagtacataaaatgttgaagtataggttgctaa |
117 |
Q |
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| T |
31481488 |
atgttcatctgctataataagatcttagattatttattgaatgagaaaaacacgaactaagaaagataagtacataaaatgttgaagtataggttgctaa |
31481587 |
T |
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| Q |
118 |
tagctcttgaagtatttcaaaaagctatcaatatttcaggtgaagatattcccaggcatcaaactttaatttataatgtttcagatatttccaatataat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
31481588 |
tagctcttgaagtatttcaaaaagctatcaatatttcaggtgaagatattcccaggcatcaaactttaatttatgatgtttcagatatttccaatataat |
31481687 |
T |
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| Q |
218 |
tgcctacaactgcagtg |
234 |
Q |
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| T |
31481688 |
tgcctacaactgcagtg |
31481704 |
T |
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