View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21585_high_51 (Length: 208)
Name: NF21585_high_51
Description: NF21585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21585_high_51 |
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Alignment Details
Target: chr7 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 47782914 - 47782726
Alignment:
| Q |
1 |
gttcttatatacttccatttcgaaaacataattcatctcattactacagggatgatcccaattagaaattaaactagcttttcattgtgaaggctatctc |
100 |
Q |
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| T |
47782914 |
gttcttatatacttccatttcgaaaacataattcatctcattactacagggatgatcccaattagaaattaaactagcttttcattgtgaaggctatctc |
47782815 |
T |
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| Q |
101 |
gcatttcatgcttaacaaactatgaagtcgatgtaggaaaat-aataaggaagtcataggagagagactattaagagttccacatactt |
188 |
Q |
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| T |
47782814 |
gcatttcatgcttaacaaactatgaagtcgatgtaggaaaataaaaaaggaagtcataggagagagactattaagagttccacatactt |
47782726 |
T |
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Target: chr8 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 39382103 - 39382057
Alignment:
| Q |
16 |
catttcgaaaacataattcatctcattactacagggatgatcccaat |
62 |
Q |
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| T |
39382103 |
catttcgaaaacttaattcatccaattactacagggatgatcccaat |
39382057 |
T |
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