View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21585_low_25 (Length: 303)
Name: NF21585_low_25
Description: NF21585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21585_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 2 - 286
Target Start/End: Original strand, 49110102 - 49110386
Alignment:
| Q |
2 |
tcctttctacagagagtaggaatttaagctgctaaaagcttaatccaaggatccatacccaacaaattctatcccaacactaattcaaataattctagga |
101 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||||||||||||||| |
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| T |
49110102 |
tcctttctacagagagtaggaattgaagctgctaaaagcttaatccaaggagcaatagccaacaaattttatcccaacactaattcaaataattctagga |
49110201 |
T |
|
| Q |
102 |
aacaaatttgcattgcagatttagggtgctccacaggaccaaacaccttcattgcaattcaatgcattatagaagcaatagaactccaatacaagtcaca |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
49110202 |
aacaaatttgcattgcagatttagggtgctccacaggaccaaacaccttcattgcaattcaatgcattatagaagcaattgaactccaatacaagtcaca |
49110301 |
T |
|
| Q |
202 |
aggccttgctatcccagagtttcaagttttcttcaatgaccaaatttcaaatgatttcaacacactcttcaaaaagcttccatca |
286 |
Q |
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| T |
49110302 |
aggccttgctatcccagagtttcaagttttcttcaatgaccaaatttcaaatgatttcaacacactcttcaaaaagcttccatca |
49110386 |
T |
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