View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21585_low_26 (Length: 301)

Name: NF21585_low_26
Description: NF21585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21585_low_26
NF21585_low_26
[»] chr7 (1 HSPs)
chr7 (13-301)||(46895450-46895738)


Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 13 - 301
Target Start/End: Complemental strand, 46895738 - 46895450
Alignment:
Q  13 aaaataaccataacagaaaaataacaaagttctgaaagttctaatattttgatatatagataatagatactatagactatttttaggaacaaagcatctt 112  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46895738 aaaataaccataacagaaaaataacaaagttctgaaatttctaatattttgatatatagatagtagatactatagactatttttaggaacaaagcatctt 46895639  T
Q  113 taaagagagatatatagggtggtgatgaggaaaggcatgtagatagagatgatcaagttaccattgttagaaaagagatgtttttcaagaacgtagtatt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46895638 taaagagagatatatagggtggtgatgaggaaaggcatgtagaaagagataatcaagttaccattgttagaaaagagatgtttttcaagaacgtagtatt 46895539  T
Q  213 ttgttagaaagatagggcaacattggataggatcatcacacattcttgggggaaaagaagcatttcgtattccgatccaagctaagata 301  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  46895538 ttgttagaaagatagggcaacattggataggatcatcacacgttcttgggggaaaagaagcatttcgtattccgatccaagctaagata 46895450  T

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