View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21585_low_36 (Length: 266)
Name: NF21585_low_36
Description: NF21585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21585_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 40836851 - 40836596
Alignment:
| Q |
1 |
cttatctttaaattgccaaagtcacacaatcagccagagagaatcatttagttcataatgatcgaagtagcttcacatttaagtttgtgtttggaactta |
100 |
Q |
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| T |
40836851 |
cttatctttaaattgccaaagtcacacaatcagccagagagaatcatttagttcataatgatcgaagtagcttcacatttaagtttgtgtttggaactta |
40836752 |
T |
|
| Q |
101 |
tttttgacaaatagcatgtggttggaacttaaatttcattaaacatgctaatacggatgaaggttctgacacatactaatgcttgttagtttttagagaa |
200 |
Q |
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|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40836751 |
tttttgacaa-tagcatgtggttggaacttaaacttcattaaacatgctaatacggatgaaggttctgacacatactaatgcttgttagtttttagagaa |
40836653 |
T |
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| Q |
201 |
ggcagggccaaaattaatttcaaacacctgaaattggtttttgacatgtttgatgat |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40836652 |
ggcagggccaaaattaatttcaaacacctgaaattggtttttgacatgtttgatgat |
40836596 |
T |
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