View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21585_low_8 (Length: 525)
Name: NF21585_low_8
Description: NF21585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21585_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 436; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 21 - 515
Target Start/End: Original strand, 45098587 - 45099082
Alignment:
| Q |
21 |
tttactctcctatttactttactctatgtatgttatgtatcaatcatctaacggttgagatttatgactacgtgagtacaatgtgtctgcataaaatcca |
120 |
Q |
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| T |
45098587 |
tttactctcctatttactttactctatgtatgttatgtatcaatcatctaacggttgagatttatgactacgtgagtacaatgtgtctgcataaaatcca |
45098686 |
T |
|
| Q |
121 |
agtcctttttgagtgacggatatatacaccatatagtagcattaacagaatccagtttaacagcacacattagtagtatttcatgtcttgcattatgtgc |
220 |
Q |
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| T |
45098687 |
agtcctttttgagtgacagatatatacaccatatagtagcattaacagaatccagtttaacagcacacattagtagtatttcatgtcttgcattatgtgc |
45098786 |
T |
|
| Q |
221 |
tgataccaataataacttttgatacgattggcaaaagaaaaaaggtatggtat-ggttggtgggtgggcaatgccaattggatttagccacttcaaaata |
319 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
45098787 |
tgataccaataataacttttgatacgattggcaaaagaaaaaaggtatggtatgggttggtgggt-ggcaatgccaattggatttagccacttcaaaata |
45098885 |
T |
|
| Q |
320 |
acatttgttgaacatattcaagtttaattttccctattgatataccaacactctcccaaccatgatcagcgtgcctactcctacatgactcaaaactgaa |
419 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45098886 |
acatttgttgaatatattcaagtttaattttccctattgatataccaacactctcccaaccatgatcagcgtgcctactcctacatgactcaaaactgaa |
45098985 |
T |
|
| Q |
420 |
aagctta-nnnnnnngtctctccactctgcacccaactcgagaagcaacagttttatgggcacaaatccacttcaaaccacttacactcattctgtg |
515 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |
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| T |
45098986 |
aagcttattttttttgtctctccactctgcacccaactcgagaagcaacagttttatgggcacaaatcctcttcaaaccacttacactcatactgtg |
45099082 |
T |
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