View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21587_low_9 (Length: 335)
Name: NF21587_low_9
Description: NF21587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21587_low_9 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 7 - 335
Target Start/End: Complemental strand, 32745862 - 32745534
Alignment:
| Q |
7 |
tcgaagaaaataatgagcttttgtactacaaaagtggtgtcatgttgtatttggaggactcaatcagaacttggagctaaagttggtgacgaactgaaga |
106 |
Q |
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| T |
32745862 |
tcgaagaaaataatgagcttttgtactacaaaagtggtgtcatgttgtatttggaggactcaatcagaacttggagctaaagttggtgacgaactgaaga |
32745763 |
T |
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| Q |
107 |
atggaataaatgtagctaagaatcttcaaatccaaccacttaacatcattgaaaatctcattattaaaagtttgtgaaattctttcctttgtcgcgtgcc |
206 |
Q |
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| T |
32745762 |
atggaataaatgtagctaagaatcttcaaatctaaccacttaacatcattgaaaatctcattattaaaagtttgtgaaattctttcctttgtcgcgtgcc |
32745663 |
T |
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| Q |
207 |
cctctttttccgaaaattcccttgattttcttagacgaggtggcttcttccatggaccactatagccatatgttccaccatggaccctgatggcccaaat |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||| |
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| T |
32745662 |
cctctttttccgaaaattcccttgattttcttagacgaggtggcttcttccatagaccactatagccatatgttccaccatggaccatgatggaccaaat |
32745563 |
T |
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| Q |
307 |
tttttaaatggtgatagatctctgtctta |
335 |
Q |
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|||||| |||||||||||||| ||||||| |
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| T |
32745562 |
tttttagatggtgatagatctatgtctta |
32745534 |
T |
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