View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21588_high_4 (Length: 276)
Name: NF21588_high_4
Description: NF21588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21588_high_4 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 276
Target Start/End: Complemental strand, 7286018 - 7285752
Alignment:
| Q |
10 |
aagaaaagaaaaaggtataagaaatataagaaattcaagaggcaaataaacaagattaataatcatgaacaatactaattaataatcatggacataccga |
109 |
Q |
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| T |
7286018 |
aagaaaagaaaaaggtataagaaatataagaaattcaagaggcaaataaacaagattaataatcatgaacaatactaattaataatcatggacataccga |
7285919 |
T |
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| Q |
110 |
ttaatatgcaactatttaaccagaagtttacaatcatgttgtatcaacattaaaacaagtctaacatcaccatggagccaagcaaagcaatcaagtttca |
209 |
Q |
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| T |
7285918 |
ttaatatgcaactatttaaccagaagtttacaatcatgttgtatcaacattaaaacaagtctaacatcaccatggagccaagcaaagcaatcaagtttca |
7285819 |
T |
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| Q |
210 |
tttcaaatcatattcaaaaaccagaagcatgtgtggtgcagtatgagtcatatttgactccaaaata |
276 |
Q |
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| T |
7285818 |
tttcaaatcatattcaaaaaccagaagcatgtgtggtgcagtatgagtcatatttgactccaaaata |
7285752 |
T |
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