View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2158_high_100 (Length: 222)
Name: NF2158_high_100
Description: NF2158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2158_high_100 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 53090965 - 53090745
Alignment:
| Q |
1 |
ataggaacaatatccaagaccaatagcatatccacccaccgctttggttctctttctgagatagtataacagaattgttctagtaaagtggacgcgaaga |
100 |
Q |
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| T |
53090965 |
ataggaacaatatccaagaccaatagcatatccacccaccgctttggctctctttctgagatagtataacagaattgttctagtgaagtggacgcgaaga |
53090866 |
T |
|
| Q |
101 |
aacgaagcttccaatcttcataccatatattatgccaattgtctcctttaatattgtccatttctactacacattactaactactacttataactaacct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
53090865 |
aacgaagcttccaatcttcataccatatattatgccaattgtctcctttaatattgtccatttctactacacattactaactactacttataaccaacct |
53090766 |
T |
|
| Q |
201 |
aattatctcattcttctctct |
221 |
Q |
| |
|
||||||||||||||||||||| |
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|
| T |
53090765 |
aattatctcattcttctctct |
53090745 |
T |
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