View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2158_high_68 (Length: 311)
Name: NF2158_high_68
Description: NF2158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2158_high_68 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 40 - 295
Target Start/End: Complemental strand, 23407278 - 23407020
Alignment:
| Q |
40 |
atcactaaaattgtgagataattaacataaaaactaggataccattgacattctgttaccataatgataaaaacaaatcgctagctttaaaacaccgaaa |
139 |
Q |
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| T |
23407278 |
atcactaaaactgtgagataattaacataaaaactaggataccattgacattctgttacgataatgataaaaacaaatcggtagctttaaaacaccgaaa |
23407179 |
T |
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| Q |
140 |
aggaatgcaatcccatttatttatttaccaatcaaatcctctttaatttg--aatctgaaatctcttgtttgcaatcagcacaaaacattttttctttaa |
237 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||| |
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| T |
23407178 |
aggaatgcaatcccatttatttatttaccaatcaaatcctctttaatttgttattctgagatctcttgtttgcaatcagcacaaaacattttatctttaa |
23407079 |
T |
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| Q |
238 |
gaaacttaaatacaatta-atggtgtttttccctttgtacgtactcttaaagaaataaa |
295 |
Q |
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||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||| |
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| T |
23407078 |
gaaactttaatacaattatatggtgtttttccctttgtacgtactctaaaagaaataaa |
23407020 |
T |
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