View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2158_high_72 (Length: 298)
Name: NF2158_high_72
Description: NF2158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2158_high_72 |
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Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 17 - 280
Target Start/End: Original strand, 1112344 - 1112607
Alignment:
| Q |
17 |
agttgaagatagcagaaagcaagaaaatgtaattgtggagaattctgttcattcattaacttctcagatcaatgaactagctgtttctggagatacatcc |
116 |
Q |
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| T |
1112344 |
agttgaagatagcagaaagcaagaaaatgtaattgtggagaattctgttcattcattaacttctcagatcaatgaactagctgtttctggagatacatcc |
1112443 |
T |
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| Q |
117 |
atcgttactcctaccaccaattccgtggaagcttcggagccaattgggtcagctcaagatttagacaagagaattcgagcattaaaaaagaaggtgccta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1112444 |
atcgttactcctaccaccaattccgtggaagcttcggagccaattgggtcagctcaagatttagacaagagaattcgagcattaaaaaagaaggtgccta |
1112543 |
T |
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| Q |
217 |
tactatgcttttaactttctgcatatgtcaagcatgcacgtgataaatattctataagaattca |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1112544 |
tactatgcttttaactttctgcatatgtcaagcatgcacgtgataaatattctataagaattca |
1112607 |
T |
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