View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2158_low_23 (Length: 523)

Name: NF2158_low_23
Description: NF2158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2158_low_23
NF2158_low_23
[»] chr3 (10 HSPs)
chr3 (114-499)||(8070888-8071273)
chr3 (41-288)||(8039555-8039812)
chr3 (11-121)||(8069494-8069604)
chr3 (318-417)||(8039916-8040016)
chr3 (253-290)||(5407212-5407249)
chr3 (240-288)||(28812597-28812645)
chr3 (240-290)||(7171570-7171620)
chr3 (253-291)||(25775575-25775613)
chr3 (253-290)||(15999963-16000000)
chr3 (253-289)||(1389908-1389944)
[»] chr1 (6 HSPs)
chr1 (248-290)||(16164252-16164294)
chr1 (253-289)||(6612113-6612149)
chr1 (240-290)||(9690213-9690263)
chr1 (242-290)||(1486646-1486694)
chr1 (253-289)||(16297234-16297270)
chr1 (238-290)||(18190046-18190098)
[»] scaffold0022 (1 HSPs)
scaffold0022 (239-290)||(90912-90963)
[»] chr8 (5 HSPs)
chr8 (240-290)||(8343396-8343446)
chr8 (240-290)||(36450694-36450744)
chr8 (240-289)||(8343037-8343086)
chr8 (240-284)||(13436910-13436954)
chr8 (260-288)||(31557067-31557095)
[»] chr4 (5 HSPs)
chr4 (253-290)||(30982820-30982857)
chr4 (240-288)||(17876237-17876285)
chr4 (247-290)||(35952568-35952611)
chr4 (238-290)||(23292924-23292976)
chr4 (240-288)||(47264068-47264116)
[»] chr6 (5 HSPs)
chr6 (240-291)||(9027235-9027286)
chr6 (239-290)||(24645550-24645601)
chr6 (293-337)||(10760884-10760928)
chr6 (253-289)||(21395266-21395302)
chr6 (262-290)||(34172257-34172285)
[»] chr2 (1 HSPs)
chr2 (292-327)||(10547972-10548007)
[»] chr7 (3 HSPs)
chr7 (248-290)||(3294252-3294294)
chr7 (240-290)||(9778574-9778624)
chr7 (240-284)||(5307331-5307375)
[»] chr5 (2 HSPs)
chr5 (240-290)||(21522830-21522880)
chr5 (240-290)||(21533396-21533446)
[»] scaffold0020 (1 HSPs)
scaffold0020 (263-291)||(135286-135314)


Alignment Details
Target: chr3 (Bit Score: 354; Significance: 0; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 114 - 499
Target Start/End: Original strand, 8070888 - 8071273
Alignment:
Q  114 aattggtgaaggaaaccagcaagtatacaagaacatgacacatgaagagtaccttaataggtttttcaataggaaacctttattgatagtcttatattat 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  8070888 aattggtgaaggaaaccagcaagtatacaagaacatgacacatgaagagtactttaataggtttttcaataggaaacctttattgatagtcttagattat 8070987  T
Q  214 aataaatgatgttatttaattgcacactatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacgataaattattaacggcgtcgacg 313  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8070988 gataaatgatgttatttaattgcacactatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacgataaattattaacggtgtcgacg 8071087  T
Q  314 tgtcagtgtccgtggttcatagattgcatatcatttttattgtacaactcttctgctatatcctttttgagtaataatcaagaaaaagtcatgtaaattg 413  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8071088 tatcagtgtccgtggttcatagattgcacatcatttttattgtacaactcttctgctatatcctttttgagtaataatcaagaaaaagtcatgtaaattg 8071187  T
Q  414 tatctttgtttatctaatccagaaaactgtaaagaataaaagatgacaaaagtgagtctaaattatgatttttatttgctttatcg 499  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8071188 tatctttgtttatctaatccataaaagtgtaaagaataaaagatgacaaaagtgagtctaaattatgatttttatttgctttatcg 8071273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 41 - 288
Target Start/End: Original strand, 8039555 - 8039812
Alignment:
Q  41 tgaaggaaagattgacaatagtaacattttgttatccaaccccttctattgacattgcacctgctaagaagttaattggtgaaggaaaccagcaagtata 140  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  8039555 tgaaggaaagattgacaatagtgacattttgctatccaagcccttctatggacattgcacctgctaagaaattaattgttgaaggaaaccaacaagtata 8039654  T
Q  141 caagaacatgacacatgaagagtaccttaataggtttttcaatag----------gaaacctttattgatagtcttatattataataaatgatgttattt 230  Q
    |||||||||||||||||  |||||  || |||| |||||||||||          ||| |||||||||||||| ||| ||||| |||||||||||| |||    
T  8039655 caagaacatgacacatgctgagtattttgatagatttttcaataggaagcttgatgaatcctttattgatagtattagattatgataaatgatgttgttt 8039754  T
Q  231 aattgcacactatgaggcacatacactctttggattaggcgtgtcctggtgtcggaca 288  Q
    ||||||||||||||| ||||| | |||||| |||||| |||||||| |||||||||||    
T  8039755 aattgcacactatgaagcacagatactcttcggattaagcgtgtcccggtgtcggaca 8039812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 8069494 - 8069604
Alignment:
Q  11 cacagagctgtagtaaataagttgaagccttgaaggaaagattgacaatagtaacattttgttatccaaccccttctattgacattgcacctgctaagaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8069494 cacagagctgtagtaaataagttgaagccttgaaggaaagattgacaatagtaacattttgttatccaaccccttctattgacattgcacctgctaagaa 8069593  T
Q  111 gttaattggtg 121  Q
    |||||||||||    
T  8069594 gttaattggtg 8069604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 417
Target Start/End: Original strand, 8039916 - 8040016
Alignment:
Q  318 agtgtccgtggttcatagattgcatatcatttttattgt-acaactcttctgctatatcctttttgagtaataatcaagaaaaagtcatgtaaattgtat 416  Q
    |||||| ||| ||||||||||||| |||||||||||| | || |||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  8039916 agtgtctgtgcttcatagattgcacatcatttttatttttaccactcttctgctatatcctttttgaatattaatcaagaaaaagtcatgtaaattgtat 8040015  T
Q  417 c 417  Q
    |    
T  8040016 c 8040016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 5407212 - 5407249
Alignment:
Q  253 acactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  5407212 acactctttggattaggcgtgtcctggcgtcggacacg 5407249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 28812645 - 28812597
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggaca 288  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||||||    
T  28812645 ctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggaca 28812597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 7171620 - 7171570
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||| ||| |||||||| ||||||||||||||||  |||||||||||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacg 7171570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 25775613 - 25775575
Alignment:
Q  253 acactctttggattaggcgtgtcctggtgtcggacacga 291  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  25775613 acactcctcggattaggcgtgtcctggtgtcggacacga 25775575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 15999963 - 16000000
Alignment:
Q  253 acactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  15999963 acactccttggattaggcgtgtcccggtgtcggacacg 16000000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 1389944 - 1389908
Alignment:
Q  253 acactctttggattaggcgtgtcctggtgtcggacac 289  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  1389944 acactccttggattaggcatgtcctggtgtcggacac 1389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 16164252 - 16164294
Alignment:
Q  248 cacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  16164252 cacatacactcttcggattaggcgtgtcctggtgtcggacacg 16164294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 6612113 - 6612149
Alignment:
Q  253 acactctttggattaggcgtgtcctggtgtcggacac 289  Q
    |||||| ||||||||||||||||||||||||||||||    
T  6612113 acactccttggattaggcgtgtcctggtgtcggacac 6612149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 9690213 - 9690263
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||| ||||| |||||||  ||||||||||||||| |||||||||||||    
T  9690213 ctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacg 9690263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 1486646 - 1486694
Alignment:
Q  242 atgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||| ||||| |||||| | ||||||||||||||| |||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacg 1486694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 16297234 - 16297270
Alignment:
Q  253 acactctttggattaggcgtgtcctggtgtcggacac 289  Q
    |||||| | ||||||||||||||||||||||||||||    
T  16297234 acactcctcggattaggcgtgtcctggtgtcggacac 16297270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 18190046 - 18190098
Alignment:
Q  238 cactatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||||| || ||||||||| | |||||||| |||||| |||||||||||||    
T  18190046 cactatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacg 18190098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 90963 - 90912
Alignment:
Q  239 actatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    ||||||| |||||||||||| |||||||||||||||  ||||||||||||||    
T  90963 actatgaagcacatacactcattggattaggcgtgttttggtgtcggacacg 90912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 8343446 - 8343396
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||||||||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacg 8343396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 36450694 - 36450744
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||| ||||| |||||| | |||||||||||||||||||||||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacg 36450744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 8343086 - 8343037
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggacac 289  Q
    |||||| ||||| |||||||| ||||||||||||||| ||||||||||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 13436910 - 13436954
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcg 284  Q
    |||||| ||||| |||||| ||||||||||||||||| |||||||    
T  13436910 ctatgaagcacagacactccttggattaggcgtgtcccggtgtcg 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 288
Target Start/End: Complemental strand, 31557095 - 31557067
Alignment:
Q  260 ttggattaggcgtgtcctggtgtcggaca 288  Q
    |||||||||||||||||||||||||||||    
T  31557095 ttggattaggcgtgtcctggtgtcggaca 31557067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000008; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 30982820 - 30982857
Alignment:
Q  253 acactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||||||||||||||||||||| |||||||||||||    
T  30982820 acactctttggattaggcgtgtcccggtgtcggacacg 30982857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 17876285 - 17876237
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggaca 288  Q
    |||||| ||||| |||||| |||||||||| ||||||||||||||||||    
T  17876285 ctatgaagcacagacactccttggattaggtgtgtcctggtgtcggaca 17876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 35952568 - 35952611
Alignment:
Q  247 gcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||    
T  35952568 gcacatacactcattggattagacgtgtcttggtgtcggacacg 35952611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 23292924 - 23292976
Alignment:
Q  238 cactatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||||| ||||  |||||| | ||||||||||||||| |||||||||||||    
T  23292924 cactatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 23292976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 47264116 - 47264068
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggaca 288  Q
    |||||| ||||| || ||||| |||||||||||||||||||||| ||||    
T  47264116 ctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagaca 47264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 9027286 - 9027235
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacga 291  Q
    |||||| ||||| |||||| ||||||||| ||||||| ||||||||||||||    
T  9027286 ctatgaagcacaaacactccttggattagccgtgtcccggtgtcggacacga 9027235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 24645601 - 24645550
Alignment:
Q  239 actatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    ||||||| ||||| |||||||| ||||||| |||||| ||||||||||||||    
T  24645601 actatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacg 24645550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 10760884 - 10760928
Alignment:
Q  293 aaattattaacggcgtcgacgtgtcagtgtccgtggttcatagat 337  Q
    ||||||||| | | ||||||||||||||||||||| |||||||||    
T  10760884 aaattattatcagtgtcgacgtgtcagtgtccgtgcttcatagat 10760928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 21395266 - 21395302
Alignment:
Q  253 acactctttggattaggcgtgtcctggtgtcggacac 289  Q
    |||||| |||||||||||||||||||||||| |||||    
T  21395266 acactccttggattaggcgtgtcctggtgtccgacac 21395302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 34172285 - 34172257
Alignment:
Q  262 ggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||||||||||||||||||||||||||    
T  34172285 ggattaggcgtgtcctggtgtcggacacg 34172257  T

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Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 10547972 - 10548007
Alignment:
Q  292 taaattattaacggcgtcgacgtgtcagtgtccgtg 327  Q
    |||||||||||||| |||||||||||||||||||||    
T  10547972 taaattattaacggtgtcgacgtgtcagtgtccgtg 10548007  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000005; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 3294252 - 3294294
Alignment:
Q  248 cacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||    
T  3294252 cacatacactcttcggattaggcgtgtcccggtgttggacacg 3294294  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 9778624 - 9778574
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||| ||||  |||||| ||||||||||||||||| |||||||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacg 9778574  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 5307375 - 5307331
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcg 284  Q
    |||||| |||| ||||||| |||||||||||||||||| ||||||    
T  5307375 ctatgaagcacgtacactccttggattaggcgtgtcctagtgtcg 5307331  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 21522880 - 21522830
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||| ||||  |||||||||||||||||||||||| |||| ||||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacg 21522830  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 21533446 - 21533396
Alignment:
Q  240 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggacacg 290  Q
    |||||| ||||  |||||||||||||||||||||||| |||| ||||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacg 21533396  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 291
Target Start/End: Original strand, 135286 - 135314
Alignment:
Q  263 gattaggcgtgtcctggtgtcggacacga 291  Q
    |||||||||||||||||||||||||||||    
T  135286 gattaggcgtgtcctggtgtcggacacga 135314  T

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