View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2158_low_50 (Length: 396)
Name: NF2158_low_50
Description: NF2158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2158_low_50 |
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Alignment Details
Target: chr7 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 14 - 378
Target Start/End: Original strand, 45081359 - 45081723
Alignment:
| Q |
14 |
aatatggagcttcctatgtcaaattgtaactgttaatgttactatatttgtgcaaatgtatatcatcatcaagtttgtttcaaattccaattcaataaat |
113 |
Q |
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| T |
45081359 |
aatatggagcttcctatgtcaaattgtaactgttaatgttactatatttgtgcaaatgtatatcatcatcaagtttgtttcaaattccaattcaataaat |
45081458 |
T |
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| Q |
114 |
gatgactagtttgagtcttgtaatagttttgaacatcactttcgatgagtttatataacaattgcatggttcatacttcatagtcattctcacatgatag |
213 |
Q |
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| T |
45081459 |
gatgactagtttgagtcttgtaatagttttgaacatcactttcgatgagtttatacaacaattgcatggttcatacttcatagtcattctcacatgatag |
45081558 |
T |
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| Q |
214 |
gaatctccaatgcaattgaattaaatatccatggatgtcaaatatgagaacaatgagaacaattcttttacgtgaaaacataatttctctaaagcagttt |
313 |
Q |
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| T |
45081559 |
gaatctccaatgcaattgaattaaatatccaccgatgtcaaatatgagaacaataagaacaattcttttacgtgaaaacataatttctctaaagcagttt |
45081658 |
T |
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| Q |
314 |
cagattagcactagatgtaagataatttgtaatatacaaagtatatgtattcatatatgcctcac |
378 |
Q |
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| T |
45081659 |
cagattagcactagatgtaagataatttgtaatatacaaagtatatgtattcatatatgcctcac |
45081723 |
T |
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