View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2158_low_85 (Length: 277)
Name: NF2158_low_85
Description: NF2158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2158_low_85 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 16 - 266
Target Start/End: Complemental strand, 48450108 - 48449858
Alignment:
| Q |
16 |
acttcttgcccaccttcttcttcatcgtcataatccgccatacaaacactgtcatcgtcacaatcacattcaccagatgtataatcgtcgcacatcacgt |
115 |
Q |
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| T |
48450108 |
acttcttgcccaccttcttcttcatcgtcataatccgctatacaaacactgtcatcgtcacaatcacattcaccagatgtataatcgtcgcacatcacgt |
48450009 |
T |
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| Q |
116 |
ccatatcaacgctttctttcggtaacctgtttctccaatgtttcttaatttccacaagcctctctatccaattagctctatttactctctcttcattact |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48450008 |
ccatatcaacgctttctttcggtaacctgtttctccaatgtttcttaatttccacaagcctctctatccaattagctctatttactctctcttcattact |
48449909 |
T |
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| Q |
216 |
agtttccaccatgttttcctcaatatttacatccttctcatttttattcat |
266 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
48449908 |
agtttccaccatgttttcctcaatatttacatccttctcccttttattcat |
48449858 |
T |
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