View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2158_low_87 (Length: 268)
Name: NF2158_low_87
Description: NF2158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2158_low_87 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 19539462 - 19539213
Alignment:
| Q |
1 |
aaaatatctaatctcagtgtcaccaattagaatggtgtataatctgaaaaataaagtatttggcatgagatccaatacaagagtactaaaagagtaagcc |
100 |
Q |
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| T |
19539462 |
aaaatatctaatctcagtgtcaccaattagaatggtgtataatctgaaaaataaagtatttggcatgagatccaatacaagagtactaaaagagtaagct |
19539363 |
T |
|
| Q |
101 |
ttcaacataaaagtaaaacgagaaagatttttgccattaaacatcaactataacctgagatgtctaaccacattgatgaacgggatgatgagtaatcgaa |
200 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |
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| T |
19539362 |
ttcaacataaaagtaaaacgagaaagattttcgccattaaacatcaactataacctgagatgtataaccacattgatgaacgggatgatgaggaatcgaa |
19539263 |
T |
|
| Q |
201 |
tcatgtgaatcataataataaatagagaaaacaaacacaagtagtcatat |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19539262 |
tcatgtgaatcataataataaatagagaaaacaaacacaagtagtcatat |
19539213 |
T |
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