View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2158_low_88 (Length: 267)
Name: NF2158_low_88
Description: NF2158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2158_low_88 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 25336281 - 25336547
Alignment:
| Q |
1 |
tcttttctttcttcatgttaaatcagcccaattatgtcaacttttgcttatggttctattttctctctttgtttatggcttaattgaagtacctttcaaa |
100 |
Q |
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| T |
25336281 |
tcttttctttcttcatgttaaattagcccaattatgtcaacttttgcttatggttctattttctctctttgtttatggcttaattgaagtacctttcaaa |
25336380 |
T |
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| Q |
101 |
caacctcttctttcttgtttgcacaaaaataaatttcttaaatatcttatgacattataaagcacaacataaatagtaattttcaaccaaaagaaaacca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
25336381 |
caacctcttctttcttgtttgcacaaaaataaatttcttaaatatcatatgacattataaagcacaacatcaatagtaattttcaaccaaaagaaaacca |
25336480 |
T |
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| Q |
201 |
aaaagagttgaaatttctattttaattttctaatttctaatttgacatctaaatctagctaacttac |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25336481 |
aaaagagttgaaatttctattttaattttctaatttctaatttgacatctaaatctagctaacttac |
25336547 |
T |
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