View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2158_low_91 (Length: 250)
Name: NF2158_low_91
Description: NF2158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2158_low_91 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 2937245 - 2937020
Alignment:
| Q |
16 |
atgaaagtttttgattaaggagtttaggtttctaagttactccgttctcatgctcactggtaatactatcaccttcctcataacttatatacatgatatt |
115 |
Q |
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| T |
2937245 |
atgaaagtttttgattaaggagtttaggtttctaagttactccattctcatgctcactggtaatactatcaccttcct---------tatacatgatatt |
2937155 |
T |
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| Q |
116 |
tacatgatacttttttacatttgacatttaattcccatatatgatgaaatgcctgggtgtaagatatcttcactgagttcattctatacacgaatactca |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
2937154 |
tacatgatacttttttacatttgacatttaattcccatatatgatgaaatgcctgggtgcaagatatcttcactgagttcattctatacacgaatactca |
2937055 |
T |
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| Q |
216 |
gaacctacctgcagctgataaggaggagagaaatc |
250 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
2937054 |
gaacctacctgcagctgataaggaggagagaaatc |
2937020 |
T |
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