View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2158_low_96 (Length: 246)
Name: NF2158_low_96
Description: NF2158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2158_low_96 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 23923120 - 23923349
Alignment:
| Q |
1 |
atattatcattaactcaaccaaacttgtctctttctgatttttagactttatatatattttagttttgattgattaaaaatgagtttaatatttagtcta |
100 |
Q |
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| T |
23923120 |
atattatcattaactcaaccaaacttgtctctttctgatttttagactttatatatattttagttttgattgattaaaaatgagtttaatatttagtcca |
23923219 |
T |
|
| Q |
101 |
taacagaatcatatgaaatgtatgacagggaaatgtccatgtattgttacctcatgtggaactgccggctcttatgttaattatttgtctacaaaatgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
23923220 |
taacagaatcatatgaaatgtatgacagggaaatgtccatgtattgttacctcatgtggaattgccggctcttatgttaattatttgtctacaaaatgaa |
23923319 |
T |
|
| Q |
201 |
tgaaataatagaaattgaaatagtagatag |
230 |
Q |
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|||||| ||||||||||||||||||||||| |
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| T |
23923320 |
tgaaatgatagaaattgaaatagtagatag |
23923349 |
T |
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