View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21591_low_6 (Length: 256)

Name: NF21591_low_6
Description: NF21591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21591_low_6
NF21591_low_6
[»] chr1 (37 HSPs)
chr1 (1-242)||(11944951-11945192)
chr1 (1-242)||(43630873-43631114)
chr1 (1-241)||(11809830-11810078)
chr1 (28-153)||(636478-636596)
chr1 (125-242)||(20032180-20032297)
chr1 (1-84)||(20032102-20032185)
chr1 (1-54)||(11809795-11809848)
chr1 (120-177)||(21406275-21406332)
chr1 (120-177)||(22132098-22132155)
chr1 (107-177)||(29533909-29533980)
chr1 (120-177)||(41801278-41801335)
chr1 (130-177)||(16370947-16370994)
chr1 (120-173)||(20230138-20230191)
chr1 (1-53)||(20315985-20316035)
chr1 (1-53)||(25263351-25263401)
chr1 (1-53)||(25263417-25263467)
chr1 (2-54)||(29534363-29534416)
chr1 (120-177)||(39245170-39245227)
chr1 (120-177)||(39248725-39248782)
chr1 (120-177)||(41389664-41389721)
chr1 (1-53)||(43630480-43630530)
chr1 (1-53)||(43630676-43630726)
chr1 (1-48)||(27653578-27653623)
chr1 (1-54)||(20316017-20316067)
chr1 (1-51)||(636419-636467)
chr1 (1-51)||(11809728-11809776)
chr1 (4-53)||(23072755-23072802)
chr1 (1-54)||(23072886-23072937)
chr1 (139-177)||(32649089-32649127)
chr1 (1-53)||(636254-636304)
chr1 (17-54)||(8882064-8882101)
chr1 (1-48)||(11945313-11945357)
chr1 (120-177)||(33796055-33796112)
chr1 (1-48)||(636287-636332)
chr1 (3-54)||(11945339-11945388)
chr1 (1-48)||(29764627-29764672)
chr1 (1-48)||(46198688-46198733)
[»] chr4 (37 HSPs)
chr4 (1-242)||(37839072-37839313)
chr4 (1-242)||(42597801-42598042)
chr4 (26-177)||(28384873-28385024)
chr4 (120-177)||(631747-631804)
chr4 (120-177)||(10711847-10711904)
chr4 (120-177)||(10925617-10925674)
chr4 (120-177)||(13813832-13813889)
chr4 (120-177)||(13818320-13818377)
chr4 (120-177)||(22634926-22634983)
chr4 (120-177)||(24048384-24048441)
chr4 (120-177)||(27532774-27532831)
chr4 (120-177)||(12422965-12423022)
chr4 (120-177)||(17052445-17052502)
chr4 (130-177)||(15533241-15533288)
chr4 (130-177)||(36036974-36037021)
chr4 (130-177)||(49549092-49549139)
chr4 (1-54)||(4831820-4831874)
chr4 (1-54)||(4835115-4835169)
chr4 (1-54)||(9923063-9923114)
chr4 (120-170)||(23996966-23997016)
chr4 (139-177)||(30145805-30145843)
chr4 (120-177)||(15223568-15223625)
chr4 (2-54)||(30146216-30146269)
chr4 (1-54)||(9923096-9923146)
chr4 (1-54)||(11479876-11479926)
chr4 (1-54)||(14746962-14747012)
chr4 (130-177)||(18211626-18211673)
chr4 (1-54)||(11479745-11479796)
chr4 (1-54)||(4831787-4831838)
chr4 (1-54)||(4835082-4835133)
chr4 (1-53)||(9923031-9923081)
chr4 (1-48)||(11479713-11479757)
chr4 (1-48)||(11479778-11479822)
chr4 (1-53)||(11480006-11480056)
chr4 (120-177)||(20158447-20158504)
chr4 (120-177)||(20163898-20163955)
chr4 (1-47)||(26013213-26013256)
[»] chr3 (65 HSPs)
chr3 (1-242)||(45220843-45221084)
chr3 (2-242)||(5841123-5841363)
chr3 (1-242)||(2249097-2249338)
chr3 (26-177)||(41156-41307)
chr3 (26-177)||(16325947-16326098)
chr3 (1-177)||(16840086-16840260)
chr3 (125-228)||(14648275-14648378)
chr3 (1-84)||(14648197-14648280)
chr3 (45-177)||(11912449-11912581)
chr3 (107-177)||(10834927-10834998)
chr3 (171-242)||(11912291-11912362)
chr3 (1-128)||(13435924-13436049)
chr3 (168-223)||(16840344-16840399)
chr3 (171-242)||(51608665-51608736)
chr3 (1-128)||(8928715-8928840)
chr3 (120-177)||(4590160-4590217)
chr3 (120-177)||(8491732-8491789)
chr3 (120-177)||(12853363-12853420)
chr3 (120-177)||(14670048-14670105)
chr3 (120-177)||(16795525-16795582)
chr3 (122-177)||(17318511-17318566)
chr3 (120-177)||(13435840-13435897)
chr3 (130-177)||(3801992-3802039)
chr3 (130-177)||(12304196-12304243)
chr3 (130-177)||(14764805-14764852)
chr3 (130-177)||(18899475-18899522)
chr3 (130-177)||(20249859-20249906)
chr3 (130-177)||(54519619-54519666)
chr3 (139-177)||(14681572-14681610)
chr3 (17-54)||(3265249-3265286)
chr3 (1-54)||(8928681-8928733)
chr3 (124-177)||(8928871-8928924)
chr3 (120-177)||(16751901-16751958)
chr3 (1-53)||(17685908-17685958)
chr3 (120-173)||(18933355-18933408)
chr3 (120-173)||(30064411-30064464)
chr3 (188-228)||(16840452-16840492)
chr3 (3-54)||(34852947-34852999)
chr3 (130-177)||(9532280-9532327)
chr3 (120-175)||(14068062-14068117)
chr3 (1-54)||(14965828-14965878)
chr3 (130-177)||(29545948-29545995)
chr3 (3-53)||(45220648-45220696)
chr3 (1-51)||(41352-41400)
chr3 (1-51)||(41419-41467)
chr3 (1-45)||(3265268-3265309)
chr3 (1-51)||(5841552-5841600)
chr3 (139-177)||(15463900-15463938)
chr3 (1-51)||(16325720-16325768)
chr3 (1-51)||(16325787-16325835)
chr3 (1-51)||(16325854-16325902)
chr3 (139-177)||(19774220-19774258)
chr3 (139-177)||(23372562-23372600)
chr3 (130-176)||(38312867-38312913)
chr3 (139-177)||(51299555-51299593)
chr3 (120-177)||(5219869-5219926)
chr3 (120-177)||(11853728-11853785)
chr3 (17-54)||(11914407-11914444)
chr3 (2-54)||(14965860-14965910)
chr3 (17-53)||(6808046-6808082)
chr3 (1-53)||(13436066-13436116)
chr3 (1-47)||(15061623-15061666)
chr3 (1-53)||(16839985-16840035)
chr3 (1-47)||(49970366-49970409)
chr3 (1-48)||(54876746-54876791)
[»] chr5 (31 HSPs)
chr5 (3-242)||(19075846-19076085)
chr5 (1-242)||(31253091-31253332)
chr5 (26-177)||(33473837-33473988)
chr5 (1-177)||(36459570-36459743)
chr5 (125-228)||(43243764-43243867)
chr5 (4-84)||(43243689-43243769)
chr5 (171-242)||(36459412-36459483)
chr5 (120-177)||(15238117-15238174)
chr5 (120-177)||(22120591-22120648)
chr5 (130-177)||(19510484-19510531)
chr5 (130-177)||(28372091-28372138)
chr5 (130-177)||(37600018-37600065)
chr5 (1-54)||(10816217-10816271)
chr5 (120-177)||(10751839-10751896)
chr5 (130-177)||(22339034-22339081)
chr5 (130-177)||(22749183-22749230)
chr5 (1-54)||(36459934-36459984)
chr5 (130-177)||(38146428-38146475)
chr5 (130-177)||(41878661-41878708)
chr5 (1-51)||(33473610-33473658)
chr5 (1-51)||(33473677-33473725)
chr5 (1-51)||(33473744-33473792)
chr5 (4-53)||(35852470-35852517)
chr5 (120-177)||(18354819-18354876)
chr5 (120-177)||(20912252-20912309)
chr5 (120-161)||(22108449-22108490)
chr5 (1-54)||(23538246-23538297)
chr5 (17-54)||(24212276-24212313)
chr5 (1-48)||(31252959-31253003)
chr5 (17-54)||(35852531-35852568)
chr5 (1-48)||(19076207-19076252)
[»] chr7 (61 HSPs)
chr7 (2-242)||(11394760-11395000)
chr7 (5-241)||(16185474-16185718)
chr7 (26-177)||(41283667-41283818)
chr7 (1-177)||(15213070-15213243)
chr7 (120-193)||(18301357-18301430)
chr7 (120-177)||(10607320-10607377)
chr7 (120-177)||(11660304-11660361)
chr7 (120-177)||(13891652-13891709)
chr7 (120-177)||(13892035-13892092)
chr7 (120-177)||(20486764-20486821)
chr7 (120-177)||(39268313-39268370)
chr7 (171-242)||(15212912-15212983)
chr7 (120-177)||(7520215-7520272)
chr7 (120-177)||(9752507-9752564)
chr7 (120-177)||(25928371-25928428)
chr7 (1-53)||(1490444-1490495)
chr7 (130-177)||(146522-146569)
chr7 (130-177)||(14420809-14420856)
chr7 (130-177)||(16005026-16005073)
chr7 (130-177)||(18606360-18606407)
chr7 (130-177)||(18871319-18871366)
chr7 (139-177)||(838152-838190)
chr7 (139-177)||(1203332-1203370)
chr7 (1-54)||(14157325-14157376)
chr7 (1-54)||(14157358-14157409)
chr7 (139-177)||(16109994-16110032)
chr7 (1-54)||(37793768-37793819)
chr7 (1-61)||(833612-833673)
chr7 (1-61)||(1198792-1198853)
chr7 (1-128)||(13892119-13892242)
chr7 (120-177)||(16582443-16582500)
chr7 (120-177)||(18424257-18424314)
chr7 (120-173)||(26291183-26291236)
chr7 (120-173)||(39721222-39721275)
chr7 (1-53)||(46581021-46581071)
chr7 (1-53)||(16251788-16251838)
chr7 (1-53)||(34957159-34957209)
chr7 (1-54)||(10501619-10501669)
chr7 (130-177)||(10897906-10897953)
chr7 (1-54)||(11092571-11092621)
chr7 (1-54)||(12556780-12556830)
chr7 (1-54)||(16323767-16323817)
chr7 (1-54)||(1490411-1490462)
chr7 (139-177)||(1860040-1860078)
chr7 (1-54)||(10501813-10501864)
chr7 (1-51)||(11394523-11394571)
chr7 (139-177)||(13919431-13919469)
chr7 (1-54)||(15116231-15116282)
chr7 (1-51)||(41283863-41283911)
chr7 (120-177)||(2833481-2833538)
chr7 (17-54)||(9320636-9320673)
chr7 (1-53)||(11092539-11092589)
chr7 (120-173)||(15083252-15083305)
chr7 (1-48)||(15112632-15112676)
chr7 (1-48)||(16185810-16185854)
chr7 (1-54)||(34957055-34957106)
chr7 (1-54)||(10501780-10501831)
chr7 (1-50)||(15213364-15213415)
chr7 (26-54)||(15213397-15213425)
chr7 (1-53)||(16251525-16251575)
chr7 (1-53)||(29003776-29003826)
[»] chr6 (45 HSPs)
chr6 (2-242)||(28707816-28708056)
chr6 (1-240)||(9622794-9623032)
chr6 (26-177)||(23955391-23955542)
chr6 (1-177)||(34297656-34297829)
chr6 (125-228)||(14594666-14594769)
chr6 (3-177)||(25737914-25738085)
chr6 (130-228)||(7429398-7429496)
chr6 (4-81)||(7429499-7429576)
chr6 (1-84)||(14594588-14594671)
chr6 (171-242)||(1254019-1254090)
chr6 (171-242)||(34297916-34297987)
chr6 (120-177)||(18918580-18918637)
chr6 (168-223)||(25737775-25737830)
chr6 (120-173)||(23400704-23400757)
chr6 (120-177)||(23538003-23538060)
chr6 (1-53)||(20182494-20182546)
chr6 (1-53)||(22153445-22153497)
chr6 (130-177)||(12941243-12941290)
chr6 (130-177)||(27222854-27222901)
chr6 (139-177)||(1254181-1254219)
chr6 (120-177)||(2076308-2076365)
chr6 (1-54)||(20182566-20182619)
chr6 (1-54)||(22153372-22153425)
chr6 (140-177)||(28290914-28290951)
chr6 (3-53)||(15688041-15688089)
chr6 (1-54)||(18927623-18927673)
chr6 (120-175)||(18953483-18953538)
chr6 (1-54)||(19953289-19953339)
chr6 (139-177)||(4475817-4475855)
chr6 (1-54)||(15688006-15688057)
chr6 (1-54)||(16885570-16885621)
chr6 (1-54)||(18927558-18927609)
chr6 (15-53)||(20182529-20182567)
chr6 (15-53)||(22153424-22153462)
chr6 (1-51)||(23955587-23955635)
chr6 (1-51)||(23955654-23955702)
chr6 (1-51)||(28708245-28708293)
chr6 (120-177)||(16622857-16622914)
chr6 (2-54)||(16885706-16885756)
chr6 (1-53)||(18927493-18927543)
chr6 (1-48)||(18927597-18927641)
chr6 (120-177)||(27555561-27555618)
chr6 (120-177)||(31479462-31479519)
chr6 (26-54)||(25738168-25738196)
chr6 (1-47)||(28104245-28104288)
[»] chr8 (43 HSPs)
chr8 (1-242)||(44494104-44494345)
chr8 (1-242)||(21967873-21968122)
chr8 (1-242)||(21980713-21980962)
chr8 (1-242)||(21985696-21985945)
chr8 (1-242)||(22009077-22009326)
chr8 (1-242)||(11251968-11252204)
chr8 (1-242)||(34950043-34950284)
chr8 (1-207)||(22000664-22000873)
chr8 (26-177)||(11774318-11774469)
chr8 (26-177)||(8414882-8415033)
chr8 (1-177)||(21328588-21328762)
chr8 (17-177)||(42560778-42560938)
chr8 (171-242)||(42561025-42561096)
chr8 (120-177)||(21386181-21386238)
chr8 (120-177)||(23427848-23427905)
chr8 (120-177)||(23913287-23913344)
chr8 (120-173)||(44385833-44385886)
chr8 (1-53)||(16197694-16197745)
chr8 (1-53)||(21328745-21328796)
chr8 (203-242)||(22003050-22003089)
chr8 (1-54)||(22352536-22352586)
chr8 (1-51)||(8414789-8414837)
chr8 (1-51)||(11774514-11774562)
chr8 (1-51)||(11774581-11774629)
chr8 (1-54)||(17461420-17461471)
chr8 (1-54)||(18024735-18024786)
chr8 (1-54)||(23409487-23409538)
chr8 (1-49)||(42560631-42560676)
chr8 (120-177)||(14399092-14399149)
chr8 (120-173)||(21409927-21409980)
chr8 (120-173)||(21804419-21804472)
chr8 (1-54)||(21967839-21967891)
chr8 (1-54)||(21980679-21980731)
chr8 (1-54)||(21985662-21985714)
chr8 (1-54)||(22000630-22000682)
chr8 (1-54)||(22009043-22009095)
chr8 (17-54)||(22352568-22352605)
chr8 (139-176)||(27942704-27942741)
chr8 (1-53)||(21328779-21328830)
chr8 (1-53)||(21328813-21328863)
chr8 (2-50)||(21328849-21328896)
chr8 (1-48)||(22352509-22352554)
chr8 (1-47)||(23409527-23409570)
[»] scaffold0815 (1 HSPs)
scaffold0815 (1-208)||(1-208)
[»] scaffold0679 (2 HSPs)
scaffold0679 (2-170)||(3147-3315)
scaffold0679 (1-51)||(2910-2958)
[»] chr2 (17 HSPs)
chr2 (1-177)||(37379058-37379234)
chr2 (1-61)||(22702873-22702934)
chr2 (123-177)||(21074510-21074564)
chr2 (120-177)||(9784016-9784073)
chr2 (130-177)||(6481806-6481853)
chr2 (130-177)||(6485273-6485320)
chr2 (130-177)||(9240696-9240743)
chr2 (130-177)||(19663567-19663614)
chr2 (130-177)||(20260279-20260326)
chr2 (1-54)||(18359178-18359229)
chr2 (1-54)||(22702916-22702967)
chr2 (1-48)||(18359211-18359256)
chr2 (1-54)||(34874590-34874641)
chr2 (1-53)||(24670528-24670578)
chr2 (1-53)||(24680979-24681029)
chr2 (1-53)||(34874623-34874673)
chr2 (1-47)||(24681148-24681191)
[»] scaffold0016 (2 HSPs)
scaffold0016 (28-242)||(173133-173338)
scaffold0016 (1-55)||(173077-173131)
[»] scaffold0001 (10 HSPs)
scaffold0001 (26-137)||(175428-175539)
scaffold0001 (168-242)||(163708-163782)
scaffold0001 (1-115)||(163482-163594)
scaffold0001 (1-128)||(153660-153785)
scaffold0001 (141-177)||(163588-163624)
scaffold0001 (2-53)||(153262-153312)
scaffold0001 (1-50)||(153361-153408)
scaffold0001 (1-51)||(175584-175632)
scaffold0001 (1-54)||(153627-153678)
scaffold0001 (1-53)||(153328-153378)
[»] scaffold2015 (2 HSPs)
scaffold2015 (125-228)||(444-547)
scaffold2015 (1-84)||(366-449)
[»] scaffold0098 (2 HSPs)
scaffold0098 (125-242)||(34011-34128)
scaffold0098 (1-84)||(34123-34206)
[»] scaffold0015 (2 HSPs)
scaffold0015 (1-86)||(208655-208740)
scaffold0015 (1-54)||(208722-208774)
[»] scaffold0599 (2 HSPs)
scaffold0599 (45-177)||(4143-4275)
scaffold0599 (171-242)||(3985-4056)
[»] scaffold0293 (1 HSPs)
scaffold0293 (120-191)||(21339-21410)
[»] scaffold0575 (1 HSPs)
scaffold0575 (120-177)||(6960-7017)
[»] scaffold0380 (1 HSPs)
scaffold0380 (120-177)||(3996-4053)
[»] scaffold0142 (1 HSPs)
scaffold0142 (120-177)||(8739-8796)
[»] scaffold0139 (1 HSPs)
scaffold0139 (120-177)||(23937-23994)
[»] scaffold0031 (1 HSPs)
scaffold0031 (120-177)||(37202-37259)
[»] scaffold0029 (1 HSPs)
scaffold0029 (120-177)||(62839-62896)
[»] scaffold0013 (1 HSPs)
scaffold0013 (120-177)||(74331-74388)
[»] scaffold0124 (1 HSPs)
scaffold0124 (122-177)||(25569-25624)
[»] scaffold0109 (1 HSPs)
scaffold0109 (120-175)||(37197-37252)
[»] scaffold0080 (6 HSPs)
scaffold0080 (120-177)||(28494-28551)
scaffold0080 (120-177)||(33959-34016)
scaffold0080 (1-126)||(28580-28703)
scaffold0080 (1-126)||(34045-34168)
scaffold0080 (26-54)||(28751-28779)
scaffold0080 (26-54)||(34216-34244)
[»] scaffold1427 (1 HSPs)
scaffold1427 (130-177)||(222-269)
[»] scaffold0842 (1 HSPs)
scaffold0842 (130-177)||(5264-5311)
[»] scaffold0337 (1 HSPs)
scaffold0337 (130-177)||(10831-10878)
[»] scaffold0026 (1 HSPs)
scaffold0026 (130-177)||(109623-109670)
[»] scaffold0012 (1 HSPs)
scaffold0012 (130-177)||(224152-224199)
[»] scaffold0066 (2 HSPs)
scaffold0066 (1-54)||(48109-48163)
scaffold0066 (1-54)||(48145-48196)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-54)||(145967-146021)
scaffold0021 (1-54)||(146003-146054)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-54)||(126718-126769)
scaffold0014 (1-54)||(126751-126802)
[»] scaffold0327 (1 HSPs)
scaffold0327 (140-177)||(18845-18882)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1-48)||(4016-4061)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-48)||(4016-4061)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-53)||(26620-26669)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-48)||(70843-70888)
[»] scaffold0577 (2 HSPs)
scaffold0577 (1-54)||(7626-7676)
scaffold0577 (17-54)||(7658-7695)
[»] scaffold0434 (2 HSPs)
scaffold0434 (1-54)||(7287-7337)
scaffold0434 (1-53)||(7319-7368)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-55)||(287-339)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-54)||(54217-54267)
[»] scaffold0802 (3 HSPs)
scaffold0802 (1-54)||(5893-5949)
scaffold0802 (1-48)||(5931-5975)
scaffold0802 (1-47)||(5759-5802)
[»] scaffold0544 (1 HSPs)
scaffold0544 (139-177)||(3535-3573)
[»] scaffold0200 (1 HSPs)
scaffold0200 (139-177)||(10789-10827)
[»] scaffold0032 (3 HSPs)
scaffold0032 (1-54)||(66953-67004)
scaffold0032 (1-53)||(66921-66971)
scaffold0032 (1-47)||(66993-67036)
[»] scaffold0025 (1 HSPs)
scaffold0025 (2-54)||(78096-78145)
[»] scaffold1783 (1 HSPs)
scaffold1783 (1-48)||(64-108)
[»] scaffold0877 (2 HSPs)
scaffold0877 (1-53)||(3069-3119)
scaffold0877 (1-48)||(3168-3213)
[»] scaffold0410 (1 HSPs)
scaffold0410 (120-177)||(14866-14923)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-50)||(14406-14453)
[»] scaffold0153 (1 HSPs)
scaffold0153 (1-53)||(10363-10413)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-53)||(170192-170242)
scaffold0020 (1-47)||(170095-170138)
[»] scaffold0486 (1 HSPs)
scaffold0486 (120-176)||(8600-8656)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-48)||(15482-15527)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-47)||(21650-21693)


Alignment Details
Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 11945192 - 11944951
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11945192 ggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 11945093  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11945092 aatgcgaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 11944993  T
Q  201 ggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  11944992 ggatgttaaggagaattattattgagtgtatatgatgatgtc 11944951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 43630873 - 43631114
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43630873 ggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 43630972  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43630973 aatgcgaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 43631072  T
Q  201 ggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  43631073 ggatgttaaggagaattattattgagtgtatatgatgatgtc 43631114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 11809830 - 11810078
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||||||| || ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  11809830 ggtgtactcttactttgttgttgtccatgagaggtggtatactcttacgttggttatgttgatgagtatgacgaggttatgatgatcatctatagtgttg 11809929  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagtt--------gtcttctattcatgag 192  Q
    ||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||        |||||||||||| |||    
T  11809930 aatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttctattcacgag 11810029  T
Q  193 cactaaggggatgttaaggagaattattattgagtgtatataatgatgt 241  Q
    || ||||||||||||||| ||||||| |||||||||||||| |||||||    
T  11810030 cattaaggggatgttaagaagaattaatattgagtgtatatgatgatgt 11810078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 636478 - 636596
Alignment:
Q  28 taagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattacatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| | |||||||||||||||||||    
T  636478 taagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatct-------tgttgaatgcgatgttgttatgatattacatg 636570  T
Q  128 aggttacctacgagttgttaaatgta 153  Q
    |||||||||| |||||||||||||||    
T  636571 aggttacctatgagttgttaaatgta 636596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 20032180 - 20032297
Alignment:
Q  125 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 224  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  20032180 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 20032279  T
Q  225 agtgtatataatgatgtc 242  Q
    |||| ||||  |||||||    
T  20032280 agtgcatatggtgatgtc 20032297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20032102 - 20032185
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 84  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  20032102 ggtgtactcttactttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatgatg 20032185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11809795 - 11809848
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  11809795 ggtgtactcttactttgttgttgtcgatgagaggtggtgtactcttactttgtt 11809848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 21406332 - 21406275
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21406332 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 21406275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 22132098 - 22132155
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  22132098 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22132155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 29533980 - 29533909
Alignment:
Q  107 aggttgttatgatattacatgaggttac-ctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||||||||||||| ||||  ||| ||||||||||||||  ||||||| |||||||||||||||    
T  29533980 aggttgttatgatattacatgatgttaagctatgagttgttaaatgtgtttgatgatggttatgttaagttg 29533909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 41801278 - 41801335
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  41801278 attacatgatattatctatgagttgttaaatgtacttgatgatggttatgttaagttg 41801335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 16370994 - 16370947
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  16370994 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16370947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 20230138 - 20230191
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 173  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||    
T  20230138 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 20230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20316035 - 20315985
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| ||||    
T  20316035 ggtgtactcttacattgttgtt--ctataagaggtggtgtactcttacgttgt 20315985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25263351 - 25263401
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| ||||    
T  25263351 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgt 25263401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25263417 - 25263467
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| ||||    
T  25263417 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgt 25263467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 29534416 - 29534363
Alignment:
Q  2 gtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  29534416 gtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 29534363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 39245170 - 39245227
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  39245170 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 39245227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 39248725 - 39248782
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  39248725 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 39248782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 41389664 - 41389721
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  41389664 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 41389721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43630480 - 43630530
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||| ||||    
T  43630480 ggtgtactcttacgttgttgttgt--ataagaggtggtgtactcttacgttgt 43630530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43630676 - 43630726
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||| ||||    
T  43630676 ggtgtactcttacgttgttgttgt--ataagaggtggtgtactcttacgttgt 43630726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27653578 - 27653623
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  27653578 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttac 27653623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20316067 - 20316017
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  20316067 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacattgtt 20316017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 636419 - 636467
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  636419 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 636467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11809728 - 11809776
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  11809728 ggtgtactcttac-ttgttgtttt-tataagaggtggtgtactcttacttt 11809776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 23072802 - 23072755
Alignment:
Q  4 gtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    |||||||||| ||||||||  |||||||||||||||||||||||| ||||    
T  23072802 gtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgt 23072755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23072937 - 23072886
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| | ||||||  |||||||||||||||||||||||| |||||    
T  23072937 ggtgtactcttacgtcgttgtt--ctataagaggtggtgtactcttacgttgtt 23072886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 32649127 - 32649089
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  32649127 gagttgttaaatgtacttgatgattgttatgttaagttg 32649089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 636254 - 636304
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| ||||||||  | |||||||||||||||||||||| ||||    
T  636254 ggtgtactcttacgttgttgtt--caataagaggtggtgtactcttacgttgt 636304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 8882101 - 8882064
Alignment:
Q  17 gttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  8882101 gttgttgtttataagaggtggtgtactcttacgttgtt 8882064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11945357 - 11945313
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||    
T  11945357 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttac 11945313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 33796112 - 33796055
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  33796112 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 33796055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 636287 - 636332
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| |||| |||  ||||||||||||||||||||||||    
T  636287 ggtgtactcttacgttgtcgtt--ctataagaggtggtgtactcttac 636332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 11945388 - 11945339
Alignment:
Q  3 tgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||| ||||||||||  ||||| |||||||||||||||| |||||    
T  11945388 tgtactcttacgttgttgttgt--ataaggggtggtgtactcttacgttgtt 11945339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29764627 - 29764672
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| |||||||| |  ||||||||||||||||||||||    
T  29764627 ggtgtactcttacgttgttgttat--ataagaggtggtgtactcttac 29764672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 46198688 - 46198733
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| |||||||| |  ||||||||||||||||||||||    
T  46198688 ggtgtactcttacgttgttgttat--ataagaggtggtgtactcttac 46198733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 37839072 - 37839313
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37839072 ggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 37839171  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37839172 aatgcgaggttgttatgatattacacgaggttacctacaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 37839271  T
Q  201 ggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  37839272 ggatgttaaggagaattattattgagtgtatatgatgatgtc 37839313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 42597801 - 42598042
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  42597801 ggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttatataatgttg 42597900  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||  ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42597901 aatgagaggttgttatgatattacaagaggttacctaaaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 42598000  T
Q  201 ggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  42598001 ggatgttaaggagaattattattgagtgtatatgatgatgtc 42598042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 28385024 - 28384873
Alignment:
Q  26 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 125  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||  |||||||||   ||||||||||||||||||    
T  28385024 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgatgttatgatgatcttttatgatgttgaatgtggggttgttatgatattaca 28384925  T
Q  126 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28384924 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 28384873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 631747 - 631804
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  631747 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 10711904 - 10711847
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10711904 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 10711847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 10925674 - 10925617
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10925674 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 10925617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 13813832 - 13813889
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13813832 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13813889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 13818320 - 13818377
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13818320 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13818377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 22634926 - 22634983
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  22634926 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22634983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 24048384 - 24048441
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  24048384 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 24048441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 27532831 - 27532774
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  27532831 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 27532774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 12423022 - 12422965
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| |||||||||||||||||||||||  ||||||||||||||    
T  12423022 attacatgatgttatctatgagttgttaaatgtacttgatgatagttatgttaagttg 12422965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 17052445 - 17052502
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  17052445 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 17052502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 15533288 - 15533241
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  15533288 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 15533241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 36037021 - 36036974
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  36037021 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 36036974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 49549092 - 49549139
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  49549092 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 49549139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4831820 - 4831874
Alignment:
Q  1 ggtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  4831820 ggtgtactcttacgttgttgttgttttataagaggtggtgtactcttacgttgtt 4831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4835115 - 4835169
Alignment:
Q  1 ggtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  4835115 ggtgtactcttacgttgttgttgttttataagaggtggtgtactcttacgttgtt 4835169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9923114 - 9923063
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| |||||    
T  9923114 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgtt 9923063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 23996966 - 23997016
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt 170  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| ||||||||    
T  23996966 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgt 23997016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 30145843 - 30145805
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  30145843 gagttgttaaatgtacttgatgatggttatgttaagttg 30145805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 15223625 - 15223568
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  15223625 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 15223568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 30146269 - 30146216
Alignment:
Q  2 gtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  30146269 gtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 30146216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9923146 - 9923096
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  9923146 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 9923096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11479876 - 11479926
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  11479876 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 11479926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14746962 - 14747012
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  14746962 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 14747012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 18211673 - 18211626
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| ||||||||| |||||    
T  18211673 gttatctatgagttgttaaatgtacttgatgatggttatgttgagttg 18211626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11479745 - 11479796
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| || |||||  |||||||||||||||||||||||| |||||    
T  11479745 ggtgtactcttacgtttttgtt--ctataagaggtggtgtactcttacgttgtt 11479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4831787 - 4831838
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||||| |||||    
T  4831787 ggtgtactcttactttgttgt-gt-tataagaggtggtgtactcttacgttgtt 4831838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4835082 - 4835133
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||||| |||||    
T  4835082 ggtgtactcttactttgttgt-gt-tataagaggtggtgtactcttacgttgtt 4835133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9923081 - 9923031
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| ||||    
T  9923081 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacgttgt 9923031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11479713 - 11479757
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||    
T  11479713 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttac 11479757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11479778 - 11479822
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||    
T  11479778 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttac 11479822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11480006 - 11480056
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| ||||    
T  11480006 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacgttgt 11480056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 20158447 - 20158504
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  20158447 attacatgatgatatctatgagttgttaagtgtacttgatgatgcttatgttaagttg 20158504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 20163898 - 20163955
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  20163898 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 20163955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26013256 - 26013213
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactctta 47  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||    
T  26013256 ggtgtactcttacgttgttgtt---tataagaggtggtgtactctta 26013213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 45220843 - 45221084
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45220843 ggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 45220942  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45220943 aatgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactacgg 45221042  T
Q  201 ggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  45221043 ggatgttaaggagaattattattgagtgtatatgatgatgtc 45221084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 5841363 - 5841123
Alignment:
Q  2 gtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttga 101  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5841363 gtgtactcttattttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttga 5841264  T
Q  102 atgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggg 201  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  5841263 atgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagag 5841164  T
Q  202 gatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
     ||||||||||||||||||||||| ||||| | ||||||||    
T  5841163 aatgttaaggagaattattattgaatgtatctgatgatgtc 5841123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 2249097 - 2249338
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  2249097 ggtgtactcttactttgttgttgtctatgagaggtggtgtactcttacgtggtctatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 2249196  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||  |||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2249197 aatgtgaggttgttatgatattacatgatgttacctatgagttattaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 2249296  T
Q  201 ggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||| ||||  |||||||||||||||| ||||||||    
T  2249297 ggatgttaagaagaagaattattgagtgtatatgatgatgtc 2249338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 41307 - 41156
Alignment:
Q  26 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 125  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||   ||||||||||||||||||    
T  41307 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatattaca 41208  T
Q  126 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41207 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 41156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 16325947 - 16326098
Alignment:
Q  26 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 125  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||   |||||||||||||||||||    
T  16325947 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaagttatgatgatcttttatgatgttgaatatgaggttgttatgatattaca 16326046  T
Q  126 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  16326047 tgaggttacctatgagttgttaaatgtacttgatgagggttatgtcaagttg 16326098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 16840086 - 16840260
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||||||| |||| |  |||||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||  | ||||||||||    
T  16840086 ggtgtactcttaccttgatgtttt--ataagaggtggtgtactcttacgttgtttatgttgatgattatgatgatgttatgatgattgtttatagtgttg 16840183  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||  ||||||||||||| ||||||||  ||| ||| ||||||||||||||| ||||||| |||||||||||||||    
T  16840184 aatgtgaggttgttatgatgttacatgattttatctatgagttgttaaatgtatttgatgatggttatgttaagttg 16840260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 14648275 - 14648378
Alignment:
Q  125 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 224  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14648275 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 14648374  T
Q  225 agtg 228  Q
    ||||    
T  14648375 agtg 14648378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14648197 - 14648280
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 84  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  14648197 ggtgtactcttactttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatgatg 14648280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 11912581 - 11912449
Alignment:
Q  45 ttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttg 144  Q
    |||| |||||||||||||||| ||||| || |||||||||||  | ||||||||||||||  ||| | || |||| |||||||| |||| ||| ||||||    
T  11912581 ttacgttgtttatgttgatgattatgatgatgttatgatgattgtttatagtgttgaatgagaggcttttttgatgttacatgatgttatctatgagttg 11912482  T
Q  145 ttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||| |||||||||||||||    
T  11912481 ttaaatgtacttgatgatggttatgttaagttg 11912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 10834927 - 10834998
Alignment:
Q  107 aggttgttatgat-attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10834927 aggttgttatgatgattacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10834998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 11912362 - 11912291
Alignment:
Q  171 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || | ||||||||    
T  11912362 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 11912291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13436049 - 13435924
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||| || |||||||||||||||||||| || |||||||||||| ||| |||||||| ||||||||||   | ||| ||||||    
T  13436049 ggtgtactcttacgttgttgt-gt-tataagaggtggtgtactctcacgttgtttatgttgttgattatgacgatgttatgatgactgtttatggtgttg 13435952  T
Q  101 aatgcaaggttgttatgatattacatga 128  Q
    |||   ||||||||||||| || |||||    
T  13435951 aatatgaggttgttatgatgtttcatga 13435924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 16840344 - 16840399
Alignment:
Q  168 tgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattatt 223  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16840344 tgttaagttgtcttctattcatgagtactaaggggatgttaagaagaattattatt 16840399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 51608665 - 51608736
Alignment:
Q  171 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || | ||||||||    
T  51608665 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 51608736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 8928715 - 8928840
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||  || ||| |||||||||||||||| || |||||||||||| ||| |||||||| ||||||||||  || ||| | ||||    
T  8928715 ggtgtactcttacgttgttga-gt-tatgagaggtggtgtactctcacgttgtttatgttgttgattatgacgatgttatgatgactttttatggagttg 8928812  T
Q  101 aatgcaaggttgttatgatattacatga 128  Q
    |||   ||||||||||||| ||||||||    
T  8928813 aatatgaggttgttatgatgttacatga 8928840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 4590160 - 4590217
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  4590160 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 4590217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 8491732 - 8491789
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  8491732 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 8491789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 12853363 - 12853420
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  12853363 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 14670105 - 14670048
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  14670105 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14670048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 16795582 - 16795525
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  16795582 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16795525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 17318511 - 17318566
Alignment:
Q  122 tacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  17318511 tacatgaagttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 17318566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 13435897 - 13435840
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| ||||  || ||||||||||||||||||||||| |||||||||||||||    
T  13435897 attacatgatgttatatatgagttgttaaatgtacttgatgatggttatgttaagttg 13435840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 3802039 - 3801992
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  3802039 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 3801992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 12304243 - 12304196
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  12304243 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12304196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 14764805 - 14764852
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  14764805 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14764852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 18899522 - 18899475
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  18899522 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18899475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 20249859 - 20249906
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  20249859 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20249906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 54519666 - 54519619
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  54519666 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 54519619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 14681610 - 14681572
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  14681610 gagttgttaaatgtacttgatgatggttatgttaagttg 14681572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 3265249 - 3265286
Alignment:
Q  17 gttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||||||||||||||||||||||| |||||    
T  3265249 gttgttgtctataagaggtggtgtactcttacgttgtt 3265286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8928681 - 8928733
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||||| |||||    
T  8928681 ggtgtactcttactttgttgtttt-tataagaggtggtgtactcttacgttgtt 8928733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 8928871 - 8928924
Alignment:
Q  124 catgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||| |||| ||| ||||||||||||||||||||||  |||||||||||||||    
T  8928871 catgatgttatctatgagttgttaaatgtacttgatggtggttatgttaagttg 8928924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 16751901 - 16751958
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  16751901 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 16751958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17685908 - 17685958
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||| ||||    
T  17685908 ggtgtactcttacgttgttgttgt--ataagaggtggtgtactcttacgttgt 17685958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 18933355 - 18933408
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 173  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||    
T  18933355 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 18933408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 30064464 - 30064411
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 173  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||    
T  30064464 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 30064411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 16840452 - 16840492
Alignment:
Q  188 atgagcactaaggggatgttaaggagaattattattgagtg 228  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  16840452 atgagtactaaggggatgttaagaagaattattattgagtg 16840492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 34852947 - 34852999
Alignment:
Q  3 tgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  34852947 tgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 34852999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 9532327 - 9532280
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| ||||||||| |||||    
T  9532327 gttatctatgagttgttaaatgtacttgatgatggttatgttgagttg 9532280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 14068062 - 14068117
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagt 175  Q
    ||||||||| |||| ||| |||||| |||||||| ||||||| |||||||||||||    
T  14068062 attacatgatgttatctaggagttgctaaatgtatttgatgatggttatgttaagt 14068117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14965878 - 14965828
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  14965878 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 14965828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 29545948 - 29545995
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||| ||||||||||    
T  29545948 gttatctatgagttgttaaatgtacttgatgatggttgtgttaagttg 29545995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 45220648 - 45220696
Alignment:
Q  3 tgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||| ||||    
T  45220648 tgtactcttacgttgttgttgt--ataagaggtggtgtactcttacgttgt 45220696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41400 - 41352
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  41400 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 41352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41467 - 41419
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  41467 ggtgtactcttac-ttgttgttgt-tataagaggtggtgtacttttacttt 41419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3265268 - 3265309
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactct 45  Q
    |||||||||||||   |||||||||||||||||||||||||||||    
T  3265268 ggtgtactcttac---gttgttgtctataagaggtggtgtactct 3265309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5841600 - 5841552
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  5841600 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 5841552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 15463938 - 15463900
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  15463938 gagttgttaaatgtacttgatgacgtttatgttaagttg 15463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16325720 - 16325768
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  16325720 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 16325768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16325787 - 16325835
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  16325787 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 16325835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16325854 - 16325902
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  16325854 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 16325902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 19774258 - 19774220
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  19774258 gagttgttaaatgtacttgatgatgtttatgttaagttg 19774220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 23372562 - 23372600
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  23372562 gagttgttaaatgtacttgatgattgttatgttaagttg 23372600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 38312867 - 38312913
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagtt 176  Q
    |||| ||| |||| |||||||||||||||||| ||||||||||||||    
T  38312867 gttatctatgagtggttaaatgtacttgatgatggttatgttaagtt 38312913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 51299593 - 51299555
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  51299593 gagttgttaaatgtacttgatgattgttatgttaagttg 51299555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 5219926 - 5219869
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  5219926 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 5219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 11853785 - 11853728
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  11853785 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 11853728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 11914407 - 11914444
Alignment:
Q  17 gttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  11914407 gttgttgtttataagaggtggtgtactcttacgttgtt 11914444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 14965910 - 14965860
Alignment:
Q  2 gtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||  ||||||||  |||||||||||||||||||||||| |||||    
T  14965910 gtgtactcttatgttgttgtt--ctataagaggtggtgtactcttacgttgtt 14965860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 6808082 - 6808046
Alignment:
Q  17 gttgttgtctataagaggtggtgtactcttactttgt 53  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  6808082 gttgttgtttataagaggtggtgtactcttacgttgt 6808046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13436116 - 13436066
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| ||||||| || ||||||||||||| ||||||||||||||    
T  13436116 ggtgtactcttacgttgttgt-gt-tataagaggtggtatactcttactttgt 13436066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15061666 - 15061623
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactctta 47  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||    
T  15061666 ggtgtactcttacgttgttgtt---tataagaggtggtgtactctta 15061623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16839985 - 16840035
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||| ||| | ||||||||||||||||||||||||||||    
T  16839985 ggtgtactcttac-ttgtcgtttt-tataagaggtggtgtactcttactttgt 16840035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 49970366 - 49970409
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactctta 47  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||    
T  49970366 ggtgtactcttacgttgttgtt---tataagaggtggtgtactctta 49970409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 54876746 - 54876791
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| |||||||| |  ||||||||||||||||||||||    
T  54876746 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttac 54876791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 19076085 - 19075846
Alignment:
Q  3 tgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaa 102  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19076085 tgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaa 19075986  T
Q  103 tgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagggg 202  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19075985 tgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagggg 19075886  T
Q  203 atgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  19075885 atgttaaggagaattattattgaatgtatatgatgatgtc 19075846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 31253091 - 31253332
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31253091 ggtgtactcttactttgttgttgtctataagaggtggtgtactcttaccttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 31253190  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31253191 aatgcgaggttgttatgatattacatgaggttacctacaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 31253290  T
Q  201 ggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  31253291 ggatgttaaggagaattatcattgagtgtatatgatgatgtc 31253332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 33473837 - 33473988
Alignment:
Q  26 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 125  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||   ||||||||||||||||||    
T  33473837 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatattaca 33473936  T
Q  126 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  33473937 tgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 33473988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 36459743 - 36459570
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||  | ||||||||||    
T  36459743 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgttatgatgattgtttatagtgttg 36459647  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||  ||| |||| |||| |||||||| |||| ||| |||||||||||||||||| |||| | |||||||||||||    
T  36459646 aatgagaggctgttttgatgttacatgatgttatctatgagttgttaaatgtacttaatgatgattatgttaagttg 36459570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 43243764 - 43243867
Alignment:
Q  125 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 224  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  43243764 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattatta 43243863  T
Q  225 agtg 228  Q
    ||||    
T  43243864 agtg 43243867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 43243689 - 43243769
Alignment:
Q  4 gtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 84  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  43243689 gtactcttactttgttgttgtctataagaggtggtttactcttacgttgtttatgttgatgagtatgatgaggttatgatg 43243769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 36459483 - 36459412
Alignment:
Q  171 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||| || | ||||||||    
T  36459483 taagttgtcttctattcatgagtactaaggggatgttaagaaaaattattattgggtggatttgatgatgtc 36459412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 15238117 - 15238174
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  15238117 attacatgatgttatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 15238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 22120591 - 22120648
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| |||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  22120591 attatatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22120648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 19510531 - 19510484
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  19510531 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 19510484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 28372091 - 28372138
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  28372091 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 28372138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 37600018 - 37600065
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  37600018 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 37600065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10816271 - 10816217
Alignment:
Q  1 ggtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  10816271 ggtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 10816217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 10751896 - 10751839
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  10751896 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 10751839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 22339081 - 22339034
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||| ||||    
T  22339081 gttatctatgagttgttaaatgtacttgatgatggttatgttacgttg 22339034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 22749230 - 22749183
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| |||| |||||||||||||||||| |||||||||||||||    
T  22749230 gttatctatgagtggttaaatgtacttgatgatggttatgttaagttg 22749183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36459984 - 36459934
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  36459984 ggtgtactcttacattgttgtt---tataagaggtggtgtactcttacattgtt 36459934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 38146428 - 38146475
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  38146428 gttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 38146475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 41878661 - 41878708
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| |||||||||||||||||||||||  ||||||||||||||    
T  41878661 gttatctatgagttgttaaatgtacttgatgatagttatgttaagttg 41878708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33473610 - 33473658
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  33473610 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 33473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33473677 - 33473725
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  33473677 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 33473725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33473744 - 33473792
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  33473744 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 33473792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 35852517 - 35852470
Alignment:
Q  4 gtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    |||||||||| ||||||||  |||||||||||||||||||||||| ||||    
T  35852517 gtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgt 35852470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 18354876 - 18354819
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  18354876 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 18354819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 20912252 - 20912309
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| |  ||||||||||||    
T  20912252 attacatgatgttatctatgagttgttaagtgtacttgatgatgtgtatgttaagttg 20912309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 22108449 - 22108490
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatga 161  Q
    ||||||||| |||| ||| |||||||||||||||||||||||    
T  22108449 attacatgatgttatctatgagttgttaaatgtacttgatga 22108490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23538297 - 23538246
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||||| |||||    
T  23538297 ggtgtactcttacgttgttgt-gt-tataagaggtggtgtactcttacgttgtt 23538246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 24212313 - 24212276
Alignment:
Q  17 gttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  24212313 gttgttgtttataagaggtggtgtactcttacgttgtt 24212276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31252959 - 31253003
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||    
T  31252959 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttac 31253003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 35852568 - 35852531
Alignment:
Q  17 gttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  35852568 gttgttgtttataagaggtggtgtactcttacgttgtt 35852531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19076252 - 19076207
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||  ||||||||  ||||||||||||||||||||||||    
T  19076252 ggtgtactcttatgttgttgtt--ctataagaggtggtgtactcttac 19076207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 11394760 - 11395000
Alignment:
Q  2 gtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttga 101  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11394760 gtgtactcttattttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttga 11394859  T
Q  102 atgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggg 201  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  11394860 atgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagag 11394959  T
Q  202 gatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
     ||||||||||||||||||||||| ||||| | ||||||||    
T  11394960 aatgttaaggagaattattattgaatgtatctgatgatgtc 11395000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 16185718 - 16185474
Alignment:
Q  5 tactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatg 104  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16185718 tactcttactttgttgttgtctatgagaggtggtgtactcttacgttggttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatg 16185619  T
Q  105 caaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagtt--------gtcttctattcatgagcact 196  Q
      |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||        ||||||||||||||||||||    
T  16185618 tgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttctattcatgagcact 16185519  T
Q  197 aaggggatgttaaggagaattattattgagtgtatataatgatgt 241  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||    
T  16185518 aaggggatgttaagaagaattaatattgagtgtatatgatgatgt 16185474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 41283818 - 41283667
Alignment:
Q  26 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 125  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||   ||||||||||||||||||    
T  41283818 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatattaca 41283719  T
Q  126 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41283718 tgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 41283667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 15213243 - 15213070
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||  | ||||||||||    
T  15213243 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtttatgttgatgattatcacgatgttatgatgattgtttatagtgttg 15213147  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||  ||| |||| |||| |||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||    
T  15213146 aatgagaggctgttttgatgttacatgatgttatccatgagttgttaaatgtacttgatgatggttatgttaagttg 15213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 18301430 - 18301357
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagc 193  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18301430 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttgtcttctattcatgagc 18301357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 10607320 - 10607377
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10607320 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10607377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 11660361 - 11660304
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  11660361 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 11660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 13891709 - 13891652
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13891709 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13891652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 13892092 - 13892035
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13892092 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13892035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 20486821 - 20486764
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  20486821 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20486764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 39268313 - 39268370
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  39268313 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 39268370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 15212983 - 15212912
Alignment:
Q  171 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    ||||||||| || ||||||||| ||||||||||||||||| ||||||||||||| ||| || | ||||||||    
T  15212983 taagttgtcctcaattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 15212912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 7520215 - 7520272
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  7520215 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 7520272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 9752507 - 9752564
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||| ||| |||||||||||||||    
T  9752507 attacatgatgttatctatgagttgttaaatgtacttggtgatggttatgttaagttg 9752564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 25928371 - 25928428
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| |||||||||||||||||| |||| |||||||||||||||    
T  25928371 attacatgatgttatctatgagttgttaaatgtactttatgatggttatgttaagttg 25928428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1490444 - 1490495
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  1490444 ggtgtactcttacgttgttgtt-tctataagaggtggtgtactcttacgttgt 1490495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 146569 - 146522
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  146569 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 146522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 14420856 - 14420809
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  14420856 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14420809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 16005073 - 16005026
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  16005073 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16005026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 18606407 - 18606360
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  18606407 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18606360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 18871366 - 18871319
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  18871366 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18871319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 838152 - 838190
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  838152 gagttgttaaatgtacttgatgatggttatgttaagttg 838190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 1203332 - 1203370
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1203332 gagttgttaaatgtacttgatgatggttatgttaagttg 1203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14157325 - 14157376
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| |||||    
T  14157325 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgtt 14157376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14157358 - 14157409
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| |||||    
T  14157358 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgtt 14157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 16109994 - 16110032
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16109994 gagttgttaaatgtacttgatgatggttatgttaagttg 16110032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37793768 - 37793819
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| |||||    
T  37793768 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgtt 37793819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 833612 - 833673
Alignment:
Q  1 ggtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtttatgttg 61  Q
    ||||||||||||| |||||||||| | |||| |||||||||||||| || ||||||||||||    
T  833612 ggtgtactcttactttgttgttgttttataaaaggtggtgtactctcacgttgtttatgttg 833673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1198792 - 1198853
Alignment:
Q  1 ggtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtttatgttg 61  Q
    ||||||||||||| |||||||||| | |||| |||||||||||||| || ||||||||||||    
T  1198792 ggtgtactcttactttgttgttgttttataaaaggtggtgtactctcacgttgtttatgttg 1198853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13892242 - 13892119
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||   ||||||||| |||||||||||||||||||| || ||| |||| ||| | | |||||||| ||||||||||   | ||| | ||||    
T  13892242 ggtgtactctta---tgttgttgtttataagaggtggtgtactctcacattg-ttatattgtttattatgacgatgttatgatgactgtttatggagttg 13892147  T
Q  101 aatgcaaggttgttatgatattacatga 128  Q
    |||   ||||||||||||| ||||||||    
T  13892146 aatatgaggttgttatgatgttacatga 13892119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 16582500 - 16582443
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| ||||  || ||||||||||||||||||||||| ||||||| |||||||    
T  16582500 attacatgatgttatttatgagttgttaaatgtacttgatgatggttatgataagttg 16582443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 18424314 - 18424257
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||  ||| ||| ||||||||||||||||||||||| | |||||||||||||    
T  18424314 attacatgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 18424257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 26291236 - 26291183
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 173  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||    
T  26291236 attacatgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 26291183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 39721275 - 39721222
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 173  Q
    ||||||||| | || ||| ||||||||||||||||||||||| |||||||||||    
T  39721275 attacatgatgatatctatgagttgttaaatgtacttgatgatggttatgttaa 39721222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 46581021 - 46581071
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| ||||    
T  46581021 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgt 46581071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16251788 - 16251838
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  16251788 ggtgtactcttac-ttgttgtttt-tataagaggtggtgtactcttactttgt 16251838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34957209 - 34957159
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  34957209 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttactttgt 34957159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10501619 - 10501669
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  10501619 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 10501669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 10897906 - 10897953
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| |||| |||||||||||||||||| |||||||||||||||    
T  10897906 gttatctatgagtcgttaaatgtacttgatgatggttatgttaagttg 10897953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11092621 - 11092571
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  11092621 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 11092571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12556830 - 12556780
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  12556830 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 12556780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16323817 - 16323767
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  16323817 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 16323767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1490411 - 1490462
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| |||||    
T  1490411 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacgttgtt 1490462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 1860040 - 1860078
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  1860040 gagttgttaaatgtacttgatgacgtttatgttaagttg 1860078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10501813 - 10501864
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| |||||    
T  10501813 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacgttgtt 10501864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11394523 - 11394571
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  11394523 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 11394571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 13919431 - 13919469
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  13919431 gagttgttaaatgtacttgatgacgtttatgttaagttg 13919469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15116282 - 15116231
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| |||||    
T  15116282 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacgttgtt 15116231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41283911 - 41283863
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  41283911 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 41283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 2833481 - 2833538
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  2833481 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 2833538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 9320636 - 9320673
Alignment:
Q  17 gttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  9320636 gttgttgtttataagaggtggtgtactcttacgttgtt 9320673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11092589 - 11092539
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| ||||    
T  11092589 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacgttgt 11092539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 15083305 - 15083252
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 173  Q
    ||||||||| | || ||| |||||||||| |||||||||||| |||||||||||    
T  15083305 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 15083252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15112676 - 15112632
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||    
T  15112676 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttac 15112632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16185854 - 16185810
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||    
T  16185854 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttac 16185810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34957106 - 34957055
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||||| |||||    
T  34957106 ggtgtactcttacgttgttgt-gt-tataagaggtggtgtactcttacgttgtt 34957055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10501780 - 10501831
Alignment:
Q  1 ggtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||||   |||||||||| |||||||||||||||||||||| |||||    
T  10501780 ggtgtactcttac---gttgttgtcttataagaggtggtgtactcttacgttgtt 10501831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15213415 - 15213364
Alignment:
Q  1 ggtgtactcttaccttgttgttgtct--ataagaggtggtgtactcttactt 50  Q
    ||||||||||||| |||||||| | |  ||||||||||||||||||||||||    
T  15213415 ggtgtactcttactttgttgttttttttataagaggtggtgtactcttactt 15213364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 54
Target Start/End: Complemental strand, 15213425 - 15213397
Alignment:
Q  26 tataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||||||||||||||||||||    
T  15213425 tataagaggtggtgtactcttactttgtt 15213397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16251525 - 16251575
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||| ||| | ||||||||||||||||||||||||||||    
T  16251525 ggtgtactcttac-ttgtcgtttt-tataagaggtggtgtactcttactttgt 16251575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29003826 - 29003776
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||  ||||||| || ||||||||||||||||||||||||||||    
T  29003826 ggtgtactcttatgttgttgt-gt-tataagaggtggtgtactcttactttgt 29003776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 28708056 - 28707816
Alignment:
Q  2 gtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttga 101  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28708056 gtgtactcttattttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttga 28707957  T
Q  102 atgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggg 201  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  28707956 atgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagag 28707857  T
Q  202 gatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
     ||||||||||||||||||||||| ||||| | ||||||||    
T  28707856 aatgttaaggagaattattattgaatgtatctgatgatgtc 28707816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 9622794 - 9623032
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||  |||||| |||||    
T  9622794 ggtgtactcttaccttgttgttgtctatgagaggtggtgtactcttacgtggtttatgttgatgagtatgacgagcttatgatgattctctataatgttg 9622893  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||  |||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9622894 aatgtgaggttgttatgatattacatgatgttacctatgagttgtt-aatgtacttgatgagggttatgtaaagttgtcttctattcatgagcactaagg 9622992  T
Q  201 ggatgttaaggagaattattattgagtgtatataatgatg 240  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  9622993 ggatgttaagaagaattattattgagtgtatatgatgatg 9623032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 23955542 - 23955391
Alignment:
Q  26 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 125  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||   ||||||||||||||||||    
T  23955542 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatattaca 23955443  T
Q  126 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  23955442 tgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 23955391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 34297656 - 34297829
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||||   |||||||||||| |||||||||| |||||||||||||||| |||||||| |||||||||||  | ||||||||||    
T  34297656 ggtgtactcttacgttgttgtt---tataagaggtggcgtactcttacgttgtttatgttgatgattatgacgatgttatgatgattgtttatagtgttg 34297752  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| |||| |||| |||| |||||||| |||| ||| ||||||||||||||||||| ||| |||||||||||||||    
T  34297753 aatgaaaggctgttttgatgttacatgatgttatctatgagttgttaaatgtacttgctgatggttatgttaagttg 34297829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 14594666 - 14594769
Alignment:
Q  125 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 224  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14594666 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 14594765  T
Q  225 agtg 228  Q
    ||||    
T  14594766 agtg 14594769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 177
Target Start/End: Complemental strand, 25738085 - 25737914
Alignment:
Q  3 tgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaa 102  Q
    |||||||||||   |||||||| |||||||| || ||||||||||| ||| |||||||||||| ||||||||||||||||||||  | |||||||||||     
T  25738085 tgtactcttac---gttgttgtttataagagatgatgtactcttacgttggttatgttgatgattatgacgaggttatgatgattgtttatagtgttgag 25737989  T
Q  103 tgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||  ||||| ||||||| |||||||| |||| ||| |||||| |||||||||||||||| | ||||| |||||||    
T  25737988 tgtgaggtttttatgatgttacatgatgttatctatgagttggtaaatgtacttgatgatgattatgctaagttg 25737914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 7429496 - 7429398
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtg 228  Q
    |||||||| ||||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  7429496 gttacctatgagttgttaaatgtactcgaggggggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattgagtg 7429398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 7429576 - 7429499
Alignment:
Q  4 gtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatg 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  7429576 gtactcttactttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgaggttatg 7429499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14594588 - 14594671
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 84  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  14594588 ggtgtactcttactttgttgttgtccataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgagggtatgatg 14594671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 1254090 - 1254019
Alignment:
Q  171 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || | ||||||||    
T  1254090 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 1254019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 34297916 - 34297987
Alignment:
Q  171 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||| || | ||||||||    
T  34297916 taagttgtcttctattcatgagtactaaggcgatgttaagaagaattattattgggtggatttgatgatgtc 34297987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 18918580 - 18918637
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  18918580 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 18918637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 25737830 - 25737775
Alignment:
Q  168 tgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattatt 223  Q
    |||||||||||||||||||||||||  |||||||||||||| | ||||||||||||    
T  25737830 tgttaagttgtcttctattcatgagggctaaggggatgttatgaagaattattatt 25737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 23400757 - 23400704
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 173  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||    
T  23400757 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaa 23400704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 23538060 - 23538003
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||  ||| ||||||||||||||||||||||| |||||||||||||||    
T  23538060 attacatgatgttgtctatgagttgttaaatgtacttgatgatggttatgttaagttg 23538003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20182546 - 20182494
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||    
T  20182546 ggtgtactcttacgttgtcgttgtttataagaggtggtgtactcttacattgt 20182494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22153445 - 22153497
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||    
T  22153445 ggtgtactcttacgttgtcgttgtttataagaggtggtgtactcttacattgt 22153497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 12941290 - 12941243
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  12941290 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12941243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 27222901 - 27222854
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  27222901 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 27222854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 1254219 - 1254181
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1254219 gagttgttaaatgtacttgatgatggttatgttaagttg 1254181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 2076365 - 2076308
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||| ||||||| | |||||||||||||    
T  2076365 attacatgatgttatctatgagttgttaaatgtatttgatgatgattatgttaagttg 2076308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20182619 - 20182566
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||| ||||| ||| ||||||||||||||||||| |||||    
T  20182619 ggtgtactcttacgttgtcgttgtttattagaggtggtgtactcttacgttgtt 20182566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22153372 - 22153425
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||| ||||| ||| ||||||||||||||||||| |||||    
T  22153372 ggtgtactcttacgttgtcgttgtttattagaggtggtgtactcttacgttgtt 22153425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 28290914 - 28290951
Alignment:
Q  140 agttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||||||||||||| |||||||||||||||    
T  28290914 agttgttaaatgtacttgatgatggttatgttaagttg 28290951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 15688041 - 15688089
Alignment:
Q  3 tgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||| ||||    
T  15688041 tgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgt 15688089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18927673 - 18927623
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  18927673 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 18927623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 18953483 - 18953538
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagt 175  Q
    ||||||||| || | ||| ||||||||||||||||||||||| | |||||||||||    
T  18953483 attacatgatgtcatctaggagttgttaaatgtacttgatgatgattatgttaagt 18953538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19953289 - 19953339
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  19953289 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 19953339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 4475855 - 4475817
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  4475855 gagttgttaaatgtacttgatgattgttatgttaagttg 4475817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15688006 - 15688057
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||  |||||||||||| ||||||||||| |||||    
T  15688006 ggtgtactcttacgttgttgtt--ctataagaggtgctgtactcttacgttgtt 15688057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16885570 - 16885621
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| |||||    
T  16885570 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacgttgtt 16885621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18927609 - 18927558
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| || |||||  |||||||||||||||||||||||| |||||    
T  18927609 ggtgtactcttacgtttttgtt--ctataagaggtggtgtactcttacgttgtt 18927558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 20182567 - 20182529
Alignment:
Q  15 ttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  20182567 ttgttgttgtttataagaggtggtgtactcttacgttgt 20182529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 22153424 - 22153462
Alignment:
Q  15 ttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  22153424 ttgttgttgtttataagaggtggtgtactcttacgttgt 22153462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23955635 - 23955587
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  23955635 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 23955587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23955702 - 23955654
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  23955702 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 23955654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28708293 - 28708245
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  28708293 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 28708245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 16622914 - 16622857
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||  ||| ||| || |||||||||||||||||||| | |||||||||||||    
T  16622914 attacatgatattatctatgaattgttaaatgtacttgatgatgtttatgttaagttg 16622857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 16885706 - 16885756
Alignment:
Q  2 gtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||| |||||||| |  |||||||||||||||||||||| |||||    
T  16885706 gtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacattgtt 16885756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18927543 - 18927493
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| ||||    
T  18927543 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacgttgt 18927493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18927641 - 18927597
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||    
T  18927641 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttac 18927597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 27555618 - 27555561
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  27555618 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 27555561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 31479462 - 31479519
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||  ||| ||| ||||||||||||||| ||||||| | |||||||||||||    
T  31479462 attacatgatattatctatgagttgttaaatgtatttgatgatgtttatgttaagttg 31479519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 54
Target Start/End: Complemental strand, 25738196 - 25738168
Alignment:
Q  26 tataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||||||||||||||||||||    
T  25738196 tataagaggtggtgtactcttactttgtt 25738168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28104245 - 28104288
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactctta 47  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||    
T  28104245 ggtgtactcttacgttgttgtt---tataagaggtggtgtactctta 28104288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 44494104 - 44494345
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44494104 ggtgtgctcttactttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 44494203  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||  |||||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44494204 aatgtgaggttgttatgatattacatgatgttacctatgaattgttaaatgtacttgatgatggttatgttaagttgtcttctattcatgagcactaagg 44494303  T
Q  201 ggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||| | |||||||||||||||||||| ||||||||    
T  44494304 ggatgttaagaataattattattgagtgtatatgatgatgtc 44494345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 21967873 - 21968122
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  21967873 ggtgtactcttactttgttgttgtttataagaggtggtgtaatcttacattgtttatgttgatgagtatgacgaggttatgatgatcttttatagggttg 21967972  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt--------taagttgtcttctattcatgag 192  Q
    ||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  21967973 aatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgag 21968072  T
Q  193 cactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  21968073 cactaaggggatgttaagaagaattattattgagtgtatatgatgatgtc 21968122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 21980713 - 21980962
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||||    
T  21980713 ggtgtactcttactttgttgttgtttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgattttttatagggttg 21980812  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt--------taagttgtcttctattcatgag 192  Q
    ||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  21980813 aatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgag 21980912  T
Q  193 cactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  21980913 cactaaggggatgttaagaagaattattattgagtgtatatgatgatgtc 21980962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 21985696 - 21985945
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||||    
T  21985696 ggtgtactcttactttgttgttgtttataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgatattttatagggttg 21985795  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt--------taagttgtcttctattcatgag 192  Q
    ||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  21985796 aatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgag 21985895  T
Q  193 cactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  21985896 cactaaggggatgttaagaagaattattattgagtgtatatgatgatgtc 21985945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22009077 - 22009326
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  22009077 ggtgtactcttactttgttgttatctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatagggttg 22009176  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt--------taagttgtcttctattcatgag 192  Q
    ||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        |||||||| |||||||||||||    
T  22009177 aatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtgttctattcatgag 22009276  T
Q  193 cactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  22009277 cactaaggggatgttaagaagaattattattaagtgtatatgatgatgtc 22009326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 11251968 - 11252204
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251968 ggtgtactcttaccctgttgttgtctatgagaggtggtgtactcttacgtggtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 11252067  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctatt-catgagcactaag 199  Q
    ||||  |||| ||||||||||     || |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  11252068 aatgtgaggtggttatgatat-----gatgttacctatgagttgttaaatgtacttgatgagg-ttatgttaagttgtcttctatttcatgagcactaag 11252161  T
Q  200 gggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  11252162 gggatgttaagaagaattattattgagtgtatatgatgatgtc 11252204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 34950284 - 34950043
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34950284 ggtgtactctttctttattgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttatatagtgttg 34950185  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||  |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||  || | |||  || | || | |||||||||||||| |    
T  34950184 aatgtgaggttgttctgatattacatgatgttacctatgagttgttaaatgtacttgatgagtttttttttattttttttttttttcatgagcactaatg 34950085  T
Q  201 ggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  34950084 ggatgttaagaagaattattattgagtgtatatgatgatgtc 34950043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 22000664 - 22000873
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||     |    
T  22000664 ggtgtactcttactttgttgttgtttataagaggtggtgtactcttacattgtttatgttgatgagtatgactaggttatgatgatcttttata-----g 22000758  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt--------taagttgtcttctattcatgag 192  Q
     |||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  22000759 gatgtgaggttgttatgatattacatgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgag 22000858  T
Q  193 cactaaggggatgtt 207  Q
    |||||||||||||||    
T  22000859 cactaaggggatgtt 22000873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 11774469 - 11774318
Alignment:
Q  26 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 125  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||   ||||||||||||||||||    
T  11774469 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatattaca 11774370  T
Q  126 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  11774369 tgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 11774318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 8414882 - 8415033
Alignment:
Q  26 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 125  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||| ||||   ||||||||||||||||||    
T  8414882 tataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttaaatgtggggttgttatgatattaca 8414981  T
Q  126 tgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  8414982 tgaggttacctatgagttgttaaatgtacttgattagggttattttaagttg 8415033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 21328762 - 21328588
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| |||| ||| |  |||||||||||||||||||||| || ||||||||||||| |||||||| |||||||||||  | ||||||||||    
T  21328762 ggtgtactcttactttgtcgtttt--ataagaggtggtgtactcttacgttttttatgttgatgattatgacgatgttatgatgattgtttatagtgttg 21328665  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||  ||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21328664 aatgtgaggttgttatgatgttacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 21328588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 42560778 - 42560938
Alignment:
Q  17 gttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttat 116  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||  | ||||||||||||||  ||| |||| |    
T  42560778 gttgttgtttataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgctatgatgattgtttatagtgttgaatgagaggctgtttt 42560877  T
Q  117 gatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||| |||||||| |||| ||| |||||||||||||||| |||||  |||||||||||||||    
T  42560878 gatgttacatgatgttatctatgagttgttaaatgtacgtgatggtggttatgttaagttg 42560938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 42561025 - 42561096
Alignment:
Q  171 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || | ||||||||    
T  42561025 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 42561096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 21386238 - 21386181
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21386238 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 21386181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 23427905 - 23427848
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| |||||||||||||||||| |||| |||||||||||||||    
T  23427905 attacatgatgttatctatgagttgttaaatgtacttaatgatggttatgttaagttg 23427848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 23913344 - 23913287
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| |||  |||||||||||||||||||||| |||||||||||||||    
T  23913344 attacatgatgttatctataagttgttaaatgtacttgatgatggttatgttaagttg 23913287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 44385833 - 44385886
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 173  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||||    
T  44385833 attacatgatgttatctatgagttgttaaatgtacttgatgatgattatgttaa 44385886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16197745 - 16197694
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||| ||| | ||||||||||||||||||||||||||||    
T  16197745 ggtgtactcttactttgtcgtttt-tataagaggtggtgtactcttactttgt 16197694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21328796 - 21328745
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||| ||| | ||||||||||||||||||||||||||||    
T  21328796 ggtgtactcttactttgtcgtttt-tataagaggtggtgtactcttactttgt 21328745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 22003050 - 22003089
Alignment:
Q  203 atgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  22003050 atgttaagaagaattattattgagtgtatatgatgatgtc 22003089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22352586 - 22352536
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  22352586 ggtgtactcttacattgttgtt---tataagaggtggtgtactcttacgttgtt 22352536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8414789 - 8414837
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  8414789 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 8414837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11774562 - 11774514
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  11774562 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 11774514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11774629 - 11774581
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  11774629 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 11774581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17461420 - 17461471
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||    
T  17461420 ggtgtactcttatgttgttgtt--ctataagaggtggtgtactcttacgttgtt 17461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18024735 - 18024786
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| |||||    
T  18024735 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacgttgtt 18024786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23409538 - 23409487
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||    
T  23409538 ggtgtactcttatgttgttgtt--ctataagaggtggtgtactcttacattgtt 23409487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42560631 - 42560676
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttact 49  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||||    
T  42560631 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttact 42560676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 14399092 - 14399149
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  14399092 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14399149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 21409980 - 21409927
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 173  Q
    ||||||||| | || ||| |||||||||| |||||||||||| |||||||||||    
T  21409980 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 21409927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 21804472 - 21804419
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaa 173  Q
    ||||||||| | || ||| |||||||||| |||||||||||| |||||||||||    
T  21804472 attacatgatgatatctatgagttgttaagtgtacttgatgatggttatgttaa 21804419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21967839 - 21967891
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| || | ||| | |||||||||||||||||||||||||||||    
T  21967839 ggtgtactcttactttatcgtttt-tataagaggtggtgtactcttactttgtt 21967891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21980679 - 21980731
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| || | ||| | |||||||||||||||||||||||||||||    
T  21980679 ggtgtactcttactttatcgtttt-tataagaggtggtgtactcttactttgtt 21980731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21985662 - 21985714
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| || | ||| | |||||||||||||||||||||||||||||    
T  21985662 ggtgtactcttactttatcgtttt-tataagaggtggtgtactcttactttgtt 21985714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22000630 - 22000682
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| || | ||| | |||||||||||||||||||||||||||||    
T  22000630 ggtgtactcttactttatcgtttt-tataagaggtggtgtactcttactttgtt 22000682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22009043 - 22009095
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| || | ||| | |||||||||||||||||||||||||||||    
T  22009043 ggtgtactcttactttatcgtttt-tataagaggtggtgtactcttactttgtt 22009095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 22352605 - 22352568
Alignment:
Q  17 gttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  22352605 gttgttgtttataagaggtggtgtactcttacattgtt 22352568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 27942704 - 27942741
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagtt 176  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  27942704 gagttgttaaatgtacttgatgatggttatgataagtt 27942741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21328830 - 21328779
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||| ||  | ||||||||||||||||||||||||||||    
T  21328830 ggtgtactcttactttgtcgtctt-tataagaggtggtgtactcttactttgt 21328779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21328863 - 21328813
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||| ||| | ||||||||||||||||||||||||||||    
T  21328863 ggtgtactcttac-ttgtcgtttt-tataagaggtggtgtactcttactttgt 21328813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 21328896 - 21328849
Alignment:
Q  2 gtgtactcttaccttgttgttgtctataagaggtggtgtactcttactt 50  Q
    |||||||||||| |||| ||| | |||||||||||||||||||||||||    
T  21328896 gtgtactcttactttgtcgtttt-tataagaggtggtgtactcttactt 21328849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22352554 - 22352509
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| |||||||| |  ||||||||||||||||||||||    
T  22352554 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttac 22352509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23409570 - 23409527
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactctta 47  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||    
T  23409570 ggtgtactcttacgttgttgtt---tataagaggtggtgtactctta 23409527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 208 - 1
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  208 ggtgtactcttactttgttgttgtctttaagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 109  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaagg 200  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  108 aatgcgaggttgttatgatattacatgaggttacctttgagttgttaaatgtacttgatgagggttatgttaagctgtcttctattcatgagcactaagg 9  T
Q  201 ggatgtta 208  Q
     |||||||    
T  8 agatgtta 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 3147 - 3315
Alignment:
Q  2 gtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttga 101  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3147 gtgtactcttattttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttga 3246  T
Q  102 atgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgt 170  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3247 atgcgaggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgt 3315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2910 - 2958
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  2910 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 2958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 37379234 - 37379058
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||    
T  37379234 ggtgtactcttactttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttg 37379135  T
Q  101 aatgcaaggttgttatgatattacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37379134 aatgtggggttgttatgatattacatgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 37379058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22702934 - 22702873
Alignment:
Q  1 ggtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtttatgttg 61  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||| ||||||||||||    
T  22702934 ggtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtttatgttg 22702873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 21074510 - 21074564
Alignment:
Q  123 acatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  21074510 acatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 21074564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 9784073 - 9784016
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| |||||||| |||||||||||||| |||||||||||||||    
T  9784073 attacatgatgttatctatgagttgtttaatgtacttgatgatggttatgttaagttg 9784016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 6481853 - 6481806
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  6481853 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 6481806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 6485320 - 6485273
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  6485320 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 6485273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 9240743 - 9240696
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  9240743 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 9240696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 19663567 - 19663614
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  19663567 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 19663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 20260326 - 20260279
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  20260326 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20260279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18359178 - 18359229
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||| |  ||||||||||||||||||||||||||||    
T  18359178 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttactttgtt 18359229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22702967 - 22702916
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||||||||    
T  22702967 ggtgtactcttactttgttgt-gt-tataagaggtggtgtactcttactttgtt 22702916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 18359211 - 18359256
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  18359211 ggtgtactcttactttgttgtt--ctataagaggtggtgtactcttac 18359256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34874590 - 34874641
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||    
T  34874590 ggtgtactcttatgttgttgtt--ctataagaggtggtgtactcttacgttgtt 34874641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24670578 - 24670528
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||| ||||| ||||||||  |||||||||||||||||||||||| ||||    
T  24670578 ggtgtacccttacattgttgtt--ctataagaggtggtgtactcttaccttgt 24670528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24681029 - 24680979
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||| ||||| ||||||||  |||||||||||||||||||||||| ||||    
T  24681029 ggtgtacccttacattgttgtt--ctataagaggtggtgtactcttaccttgt 24680979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34874623 - 34874673
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| ||||    
T  34874623 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacgttgt 34874673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24681191 - 24681148
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactctta 47  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||    
T  24681191 ggtgtactcttacgttgttgtt---tataagaggtggtgtactctta 24681148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 139; Significance: 8e-73; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 28 - 242
Target Start/End: Original strand, 173133 - 173338
Alignment:
Q  28 taagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattacatg 127  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||    
T  173133 taagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgatcttttatagtgttgaatgtgaggttgttatgatattatatg 173232  T
Q  128 aggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagt 227  Q
    | ||||||||  ||||||||||||||||||||||||||||||||||         || ||||||||||||||||||||||||| ||||||||||||||||    
T  173233 atgttacctattagttgttaaatgtacttgatgagggttatgttaa---------tactcatgagcactaaggggatgttaagaagaattattattgagt 173323  T
Q  228 gtatataatgatgtc 242  Q
    |||||| ||||||||    
T  173324 gtatatgatgatgtc 173338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 173077 - 173131
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgttt 55  Q
    ||||||||||||| |||||||||| |||||||||||| | |||||||| ||||||    
T  173077 ggtgtactcttactttgttgttgtttataagaggtggggcactcttacgttgttt 173131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 84; Significance: 5e-40; HSPs: 10)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 175539 - 175428
Alignment:
Q  26 tataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattaca 125  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||   ||||||||||||||||||    
T  175539 tataagaggtggtgtactcttacattgtttatgttgatgagtatgacgaggttatgatgatcttttatgatgttgaatgtggggttgttatgatattaca 175440  T
Q  126 tgaggttaccta 137  Q
    ||||||||||||    
T  175439 tgaggttaccta 175428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 163708 - 163782
Alignment:
Q  168 tgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || | ||||||||    
T  163708 tgttaagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgagtggatttgatgatgtc 163782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 163482 - 163594
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| |||| ||| |  |||||||||||||||||||||| |||||||||||||||| |||||||| ||| ||| |||  | ||||||||||    
T  163482 ggtgtactcttactttgtcgtttt--ataagaggtggtgtactcttacgttgtttatgttgatgattatgacgatgttgtgacgattgtttatagtgttg 163579  T
Q  101 aatgcaaggttgtta 115  Q
    ||||  |||||||||    
T  163580 aatgtgaggttgtta 163594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 153660 - 153785
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||  || ||| |||||||||||||||| || |||||||||||| | | |||||||| ||||||||||   | ||| ||||||    
T  153660 ggtgtactcttacgttgttga-gt-tatgagaggtggtgtactctcacgttgtttatgttgtttattatgacgatgttatgatgactgtttatggtgttg 153757  T
Q  101 aatgcaaggttgttatgatattacatga 128  Q
    |||   ||||||||||||| ||||||||    
T  153758 aatatgaggttgttatgatgttacatga 153785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 163588 - 163624
Alignment:
Q  141 gttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||||||||||||||||||||||||||||    
T  163588 gttgttaaatgtacttgatgagggttatgttaagttg 163624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 153262 - 153312
Alignment:
Q  2 gtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    |||||||||||| |||| ||| | ||||||||||||||||||||||||||||    
T  153262 gtgtactcttactttgtcgtttt-tataagaggtggtgtactcttactttgt 153312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 153361 - 153408
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactt 50  Q
    ||||||||||||| |||| |||||  ||||||||||||||||||||||||    
T  153361 ggtgtactcttactttgtcgttgt--ataagaggtggtgtactcttactt 153408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 175632 - 175584
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttacttt 51  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  175632 ggtgtactcttac-ttgtcgttgt-tataagaggtggtgtactcttacttt 175584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 153627 - 153678
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||||| |||||    
T  153627 ggtgtactcttacgttgttgt-gt-tataagaggtggtgtactcttacgttgtt 153678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 153328 - 153378
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||| ||| | ||||||||||||||||||||||||||||    
T  153328 ggtgtactcttac-ttgtcgtttt-tataagaggtggtgtactcttactttgt 153378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 444 - 547
Alignment:
Q  125 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 224  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  444 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 543  T
Q  225 agtg 228  Q
    ||||    
T  544 agtg 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 366 - 449
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 84  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  366 ggtgtactcttactttgttgttgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgatgagggtatgatg 449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 242
Target Start/End: Complemental strand, 34128 - 34011
Alignment:
Q  125 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 224  Q
    |||| |||||||| ||||||||||||||||| || ||| ||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||||||||    
T  34128 atgatgttacctatgagttgttaaatgtactcgaggagtgttatgttaggttgtctgctattcatgagcattaaggggatgttaagaagaattattattg 34029  T
Q  225 agtgtatataatgatgtc 242  Q
    ||||||||| ||||||||    
T  34028 agtgtatatgatgatgtc 34011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 34206 - 34123
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 84  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34206 ggtgtactcttactttgttggtgtctataagaggtggtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 34123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 208740 - 208655
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgat 86  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  208740 ggtgtactcttactttgttgttgtttataagaggtggtgtaatcttacattgtttatgttgatgagtatgacgaggttatgatgat 208655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 208774 - 208722
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| || | ||| | |||||||||||||||||||||||||||||    
T  208774 ggtgtactcttactttatcgtttt-tataagaggtggtgtactcttactttgtt 208722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 4275 - 4143
Alignment:
Q  45 ttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttgaatgcaaggttgttatgatattacatgaggttacctacgagttg 144  Q
    |||| |||||||||||||||| ||||| || |||||||||||  | ||||||||||||||  ||| | || |||| |||||||| |||| ||| ||||||    
T  4275 ttacgttgtttatgttgatgattatgatgatgttatgatgattgtttatagtgttgaatgagaggcttttttgatgttacatgatgttatctatgagttg 4176  T
Q  145 ttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||||||||||| |||||||||||||||    
T  4175 ttaaatgtacttgatgatggttatgttaagttg 4143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 4056 - 3985
Alignment:
Q  171 taagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtgtatataatgatgtc 242  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || | ||||||||    
T  4056 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgggtggatttgatgatgtc 3985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 21339 - 21410
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatga 191  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  21339 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttgtcttttattcatga 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 6960 - 7017
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  6960 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 4053 - 3996
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  4053 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 3996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 8739 - 8796
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||||    
T  8739 attacatgatgttatctacgagttgttaaatgtacatgatgatggttatgttaagttg 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 23937 - 23994
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  23937 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 23994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 37202 - 37259
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  37202 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 37259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 62839 - 62896
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  62839 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 62896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 74331 - 74388
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  74331 attacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 74388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 25569 - 25624
Alignment:
Q  122 tacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  25569 tacatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 25624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 37197 - 37252
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagt 175  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||    
T  37197 attacatgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagt 37252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 38; Significance: 0.000000000001; HSPs: 6)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 28551 - 28494
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| |||||||||||||||||||||||  ||||||||||||||    
T  28551 attacatgatgttatctatgagttgttaaatgtacttgatgatcgttatgttaagttg 28494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 34016 - 33959
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| |||| ||| |||||||||||||||||||||||  ||||||||||||||    
T  34016 attacatgatgttatctatgagttgttaaatgtacttgatgatcgttatgttaagttg 33959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28703 - 28580
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||  || ||| ||||||| |||||||| || |||||||||||  ||| |||||||| ||||||||||   | |||  |||||    
T  28703 ggtgtactcttacgttgttga-gt-tatgagaggtgatgtactctcacgttgtttatgttattgattatgacgatgttatgatgactgtttatgatgttg 28606  T
Q  101 aatgcaaggttgttatgatattacat 126  Q
    |||   ||||||||||||| ||||||    
T  28605 aatatgaggttgttatgatgttacat 28580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 34168 - 34045
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtttatgttgatgagtatgacgaggttatgatgatcttctatagtgttg 100  Q
    ||||||||||||| ||||||  || ||| ||||||| |||||||| || |||||||||||  ||| |||||||| ||||||||||   | |||  |||||    
T  34168 ggtgtactcttacgttgttga-gt-tatgagaggtgatgtactctcacgttgtttatgttattgattatgacgatgttatgatgactgtttatgatgttg 34071  T
Q  101 aatgcaaggttgttatgatattacat 126  Q
    |||   ||||||||||||| ||||||    
T  34070 aatatgaggttgttatgatgttacat 34045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 54
Target Start/End: Complemental strand, 28779 - 28751
Alignment:
Q  26 tataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||||||||||||||||||||    
T  28779 tataagaggtggtgtactcttactttgtt 28751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 54
Target Start/End: Complemental strand, 34244 - 34216
Alignment:
Q  26 tataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||||||||||||||||||||    
T  34244 tataagaggtggtgtactcttactttgtt 34216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 269 - 222
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  269 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 5311 - 5264
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  5311 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 5264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 10831 - 10878
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  10831 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 109670 - 109623
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  109670 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 109623  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 224152 - 224199
Alignment:
Q  130 gttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  224152 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 224199  T

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Target: scaffold0066 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48163 - 48109
Alignment:
Q  1 ggtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  48163 ggtgtactcttactttgttgttgttttataagaggtggtgtactcttacgttgtt 48109  T

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Target: scaffold0066; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48196 - 48145
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||| |||| ||||||| || |||||||||||||||||||||||||||||    
T  48196 ggtgtacttttactttgttgt-gt-tataagaggtggtgtactcttactttgtt 48145  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 146021 - 145967
Alignment:
Q  1 ggtgtactcttaccttgttgttgtct-ataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  146021 ggtgtactcttacgttgttgttgttttataagaggtggtgtactcttacgttgtt 145967  T

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Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 146054 - 146003
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||||| |||||    
T  146054 ggtgtactcttactttgttgt-gt-tataagaggtggtgtactcttacgttgtt 146003  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 126769 - 126718
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| |||||    
T  126769 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgtt 126718  T

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Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 126802 - 126751
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| |||||    
T  126802 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgtt 126751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 18882 - 18845
Alignment:
Q  140 agttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||||||||||||| |||||||||||||||    
T  18882 agttgttaaatgtacttgatgatggttatgttaagttg 18845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4061 - 4016
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  4061 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttac 4016  T

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Target: scaffold0306 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4061 - 4016
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  4061 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttac 4016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 26620 - 26669
Alignment:
Q  2 gtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||| ||||    
T  26620 gtgtactcttacgttgttgtt--ctataagaggtggtgtactcttacgttgt 26669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 70843 - 70888
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  70843 ggtgtactcttacgttgttgtt--ctataagaggtggtgtactcttac 70888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7676 - 7626
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  7676 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacattgtt 7626  T

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Target: scaffold0577; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 7695 - 7658
Alignment:
Q  17 gttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  7695 gttgttgtttataagaggtggtgtactcttacgttgtt 7658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7287 - 7337
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  7287 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 7337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7319 - 7368
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| ||||    
T  7319 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgt 7368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 339 - 287
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgttt 55  Q
    ||||||||||||| ||||||||  ||||||||||||||||| |||||| ||||||    
T  339 ggtgtactcttacgttgttgtt--ctataagaggtggtgtaatcttacgttgttt 287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54217 - 54267
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  54217 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttacgttgtt 54267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5893 - 5949
Alignment:
Q  1 ggtgtactcttaccttgt---tgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||| ||||   |||||| ||||||||||||||||||||||| |||||    
T  5893 ggtgtactcttacgttgtcgttgttgtttataagaggtggtgtactcttacgttgtt 5949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5931 - 5975
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||    
T  5931 ggtgtactcttacgttgttgtt---tataagaggtggtgtactcttac 5975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5759 - 5802
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactctta 47  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||    
T  5759 ggtgtactcttacgttgttgtt---tataagaggtggtgtactctta 5802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 3535 - 3573
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  3535 gagttgttaaatgtacttgatgattgttatgttaagttg 3573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 10827 - 10789
Alignment:
Q  139 gagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  10827 gagttgttaagtgtacttgatgatggttatgttaagttg 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 67004 - 66953
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||    
T  67004 ggtgtactcttatgttgttgtt--ctataagaggtggtgtactcttacgttgtt 66953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 66971 - 66921
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||||| |  |||||||||||||||||||||||| ||||    
T  66971 ggtgtactcttacgttgttgct--ctataagaggtggtgtactcttacgttgt 66921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 67036 - 66993
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactctta 47  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||    
T  67036 ggtgtactcttacgttgttgtt---tataagaggtggtgtactctta 66993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 78145 - 78096
Alignment:
Q  2 gtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgtt 54  Q
    |||||||||||| ||||||||   ||||||||||||||||||||||| |||||    
T  78145 gtgtactcttacgttgttgtt---tataagaggtggtgtactcttacattgtt 78096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 108 - 64
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||   ||||||||| |||||||||||||||||||||||    
T  108 ggtgtactctta---tgttgttgtttataagaggtggtgtactcttac 64  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3069 - 3119
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||| ||||    
T  3069 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttacattgt 3119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3168 - 3213
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| |||||||| |  ||||||||||||||||||||||    
T  3168 ggtgtactcttacgttgttgtttt--ataagaggtggtgtactcttac 3213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 14923 - 14866
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttg 177  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | |||||||||||||    
T  14923 attacatgaagatatctatgagttgttaagtgtacttgatgatgtttatgttaagttg 14866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14406 - 14453
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactt 50  Q
    ||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  14406 ggtgtactcttac-ttgttgtttt-tataagaggtggtgtactcttactt 14453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10413 - 10363
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||  ||||||||  |||||||||||||||||||||||| ||||    
T  10413 ggtgtactcttatgttgttgtt--ctataagaggtggtgtactcttacgttgt 10363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 170192 - 170242
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttactttgt 53  Q
    ||||||||||||  ||||||||  |||||||||||||||||||||||| ||||    
T  170192 ggtgtactcttatgttgttgtt--ctataagaggtggtgtactcttacgttgt 170242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 170095 - 170138
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactctta 47  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||    
T  170095 ggtgtactcttacgttgttgtt---tataagaggtggtgtactctta 170138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 8656 - 8600
Alignment:
Q  120 attacatgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagtt 176  Q
    ||||||||| | || ||| |||||||||| |||||||||||| | ||||||||||||    
T  8656 attacatgatgatatctatgagttgttaagtgtacttgatgatgtttatgttaagtt 8600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15527 - 15482
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactcttac 48  Q
    ||||||||||||| ||| ||||  ||||||||||||||||||||||||    
T  15527 ggtgtactcttacgttgctgtt--ctataagaggtggtgtactcttac 15482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21693 - 21650
Alignment:
Q  1 ggtgtactcttaccttgttgttgtctataagaggtggtgtactctta 47  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||    
T  21693 ggtgtactcttacgttgttgtt---tataagaggtggtgtactctta 21650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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