View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21593_high_4 (Length: 416)

Name: NF21593_high_4
Description: NF21593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21593_high_4
NF21593_high_4
[»] chr6 (24 HSPs)
chr6 (18-406)||(14564229-14564617)
chr6 (18-208)||(30752530-30752720)
chr6 (33-127)||(8064565-8064659)
chr6 (18-187)||(892234-892403)
chr6 (18-187)||(19135006-19135174)
chr6 (18-131)||(17306429-17306541)
chr6 (29-92)||(4562966-4563029)
chr6 (18-132)||(28633010-28633122)
chr6 (48-175)||(32190591-32190720)
chr6 (29-132)||(12108472-12108576)
chr6 (29-126)||(20500634-20500729)
chr6 (31-112)||(29048212-29048291)
chr6 (49-132)||(28610688-28610770)
chr6 (18-92)||(7676249-7676323)
chr6 (18-66)||(24644857-24644905)
chr6 (29-81)||(31945340-31945392)
chr6 (29-116)||(13532189-13532275)
chr6 (100-177)||(7170072-7170149)
chr6 (29-120)||(13859295-13859383)
chr6 (96-252)||(22413793-22413949)
chr6 (18-85)||(9686163-9686230)
chr6 (149-187)||(14940596-14940634)
chr6 (145-187)||(29048147-29048189)
chr6 (18-83)||(4577206-4577271)
[»] chr5 (42 HSPs)
chr5 (18-262)||(27571939-27572182)
chr5 (21-179)||(34969353-34969510)
chr5 (18-127)||(2589045-2589156)
chr5 (18-127)||(18845587-18845697)
chr5 (29-132)||(11402665-11402767)
chr5 (18-208)||(26007271-26007459)
chr5 (29-121)||(14652534-14652627)
chr5 (18-93)||(7487217-7487292)
chr5 (29-179)||(6595006-6595155)
chr5 (29-179)||(41454892-41455042)
chr5 (29-126)||(2422878-2422972)
chr5 (49-131)||(733957-734039)
chr5 (18-179)||(22747466-22747627)
chr5 (29-81)||(691467-691519)
chr5 (29-262)||(18432024-18432258)
chr5 (18-92)||(563805-563877)
chr5 (49-119)||(1681204-1681274)
chr5 (18-92)||(7591459-7591532)
chr5 (18-92)||(34881224-34881297)
chr5 (29-132)||(36760179-36760283)
chr5 (29-186)||(6633341-6633492)
chr5 (31-179)||(20191890-20192033)
chr5 (29-142)||(6718646-6718761)
chr5 (18-102)||(22415397-22415480)
chr5 (18-81)||(25495207-25495270)
chr5 (18-81)||(38176377-38176440)
chr5 (18-81)||(38203601-38203664)
chr5 (48-142)||(12263922-12264016)
chr5 (48-101)||(6367769-6367822)
chr5 (28-81)||(40884440-40884493)
chr5 (48-132)||(6895262-6895345)
chr5 (138-222)||(34881337-34881421)
chr5 (29-69)||(36567844-36567884)
chr5 (29-81)||(40109515-40109567)
chr5 (155-246)||(40884292-40884383)
chr5 (18-92)||(34111674-34111748)
chr5 (142-187)||(40331507-40331552)
chr5 (29-120)||(12378942-12379033)
chr5 (28-92)||(23411797-23411861)
chr5 (29-65)||(26690000-26690036)
chr5 (29-65)||(26959732-26959768)
chr5 (29-81)||(33792789-33792841)
[»] chr3 (37 HSPs)
chr3 (29-243)||(17144635-17144847)
chr3 (29-173)||(8557863-8558006)
chr3 (28-187)||(2832298-2832456)
chr3 (38-260)||(55467562-55467777)
chr3 (29-253)||(20846424-20846646)
chr3 (21-187)||(10481542-10481707)
chr3 (18-101)||(25465902-25465985)
chr3 (18-128)||(37045383-37045493)
chr3 (29-227)||(26758204-26758397)
chr3 (29-126)||(55129800-55129896)
chr3 (18-126)||(52632110-52632217)
chr3 (49-132)||(5681430-5681512)
chr3 (29-132)||(38651903-38652006)
chr3 (29-187)||(4554706-4554863)
chr3 (49-127)||(5640658-5640735)
chr3 (20-220)||(22472983-22473186)
chr3 (140-261)||(54121967-54122088)
chr3 (48-208)||(42363150-42363308)
chr3 (49-132)||(5671933-5672015)
chr3 (44-121)||(5695619-5695695)
chr3 (21-81)||(48167385-48167445)
chr3 (49-132)||(21238107-21238190)
chr3 (18-112)||(25858279-25858372)
chr3 (96-262)||(26291927-26292093)
chr3 (18-92)||(38680917-38680991)
chr3 (29-132)||(50578912-50579015)
chr3 (53-208)||(51191704-51191854)
chr3 (29-123)||(4280354-4280453)
chr3 (18-119)||(45915109-45915208)
chr3 (29-85)||(25919166-25919222)
chr3 (29-81)||(44651080-44651132)
chr3 (29-81)||(45629310-45629362)
chr3 (18-66)||(45699730-45699778)
chr3 (49-110)||(20038477-20038538)
chr3 (49-110)||(25089655-25089716)
chr3 (29-130)||(44661990-44662091)
chr3 (48-84)||(30739555-30739591)
[»] chr2 (28 HSPs)
chr2 (18-178)||(28790535-28790690)
chr2 (29-187)||(17762762-17762916)
chr2 (29-132)||(1331075-1331177)
chr2 (18-92)||(6946449-6946523)
chr2 (29-132)||(21734502-21734607)
chr2 (18-207)||(13193899-13194082)
chr2 (29-250)||(27301394-27301609)
chr2 (29-125)||(31719988-31720083)
chr2 (29-141)||(44085546-44085656)
chr2 (18-121)||(12041494-12041596)
chr2 (29-262)||(41461027-41461246)
chr2 (29-92)||(11377562-11377627)
chr2 (29-90)||(22014078-22014139)
chr2 (96-204)||(5862602-5862710)
chr2 (48-132)||(15320516-15320596)
chr2 (41-127)||(11051330-11051414)
chr2 (18-132)||(26316215-26316327)
chr2 (28-127)||(10242660-10242755)
chr2 (18-127)||(36500535-36500644)
chr2 (28-92)||(4657841-4657904)
chr2 (29-81)||(11678114-11678166)
chr2 (29-81)||(11695592-11695644)
chr2 (18-69)||(24725699-24725750)
chr2 (18-81)||(30761651-30761714)
chr2 (53-119)||(43452239-43452305)
chr2 (47-81)||(20985821-20985855)
chr2 (18-174)||(11650869-11651024)
chr2 (29-128)||(12884593-12884690)
[»] chr4 (37 HSPs)
chr4 (29-262)||(23120161-23120394)
chr4 (18-262)||(48293309-48293542)
chr4 (35-262)||(32223231-32223456)
chr4 (29-184)||(15723905-15724060)
chr4 (29-262)||(5122292-5122521)
chr4 (29-131)||(8311956-8312061)
chr4 (29-264)||(18536548-18536783)
chr4 (28-187)||(48338361-48338515)
chr4 (48-123)||(9058235-9058310)
chr4 (29-104)||(6101981-6102056)
chr4 (37-116)||(46471521-46471599)
chr4 (18-156)||(51907114-51907251)
chr4 (34-186)||(11031546-11031701)
chr4 (18-132)||(18399103-18399217)
chr4 (31-91)||(29700833-29700894)
chr4 (29-147)||(53934698-53934817)
chr4 (18-187)||(29232773-29232928)
chr4 (29-93)||(49640950-49641014)
chr4 (31-187)||(18396349-18396500)
chr4 (29-132)||(48602434-48602536)
chr4 (18-175)||(21069078-21069235)
chr4 (72-253)||(36106372-36106548)
chr4 (31-132)||(18319477-18319578)
chr4 (29-132)||(45983449-45983552)
chr4 (36-89)||(48684892-48684945)
chr4 (18-132)||(4688747-4688860)
chr4 (36-92)||(26674224-26674280)
chr4 (96-262)||(20986367-20986533)
chr4 (48-121)||(3349843-3349916)
chr4 (33-126)||(12916424-12916517)
chr4 (29-81)||(42198904-42198956)
chr4 (21-92)||(3666987-3667058)
chr4 (40-131)||(14866858-14866949)
chr4 (48-90)||(17794265-17794308)
chr4 (49-119)||(10778403-10778473)
chr4 (37-86)||(35233207-35233256)
chr4 (29-132)||(40494493-40494591)
[»] chr7 (44 HSPs)
chr7 (60-262)||(32942013-32942216)
chr7 (18-187)||(40848871-40849040)
chr7 (18-146)||(26524839-26524967)
chr7 (29-142)||(30079498-30079609)
chr7 (29-253)||(8568458-8568682)
chr7 (18-173)||(6879999-6880154)
chr7 (18-132)||(26215005-26215119)
chr7 (18-132)||(37375394-37375507)
chr7 (18-187)||(29211543-29211711)
chr7 (29-101)||(43202532-43202604)
chr7 (39-141)||(29628164-29628265)
chr7 (57-203)||(46147220-46147361)
chr7 (29-132)||(8118195-8118297)
chr7 (28-207)||(23032674-23032853)
chr7 (26-121)||(27215101-27215197)
chr7 (29-136)||(11399190-11399296)
chr7 (18-222)||(10338710-10338908)
chr7 (21-132)||(2308007-2308119)
chr7 (47-141)||(21237707-21237802)
chr7 (29-187)||(48642800-48642956)
chr7 (21-126)||(41459246-41459352)
chr7 (154-262)||(26215153-26215261)
chr7 (29-81)||(27100927-27100979)
chr7 (29-81)||(27177324-27177376)
chr7 (29-132)||(31287679-31287781)
chr7 (18-80)||(11834367-11834429)
chr7 (18-92)||(23675485-23675559)
chr7 (29-132)||(30855163-30855264)
chr7 (28-101)||(33434217-33434293)
chr7 (50-111)||(16359257-16359318)
chr7 (29-90)||(31012969-31013029)
chr7 (18-91)||(47483728-47483801)
chr7 (48-132)||(7685851-7685935)
chr7 (18-121)||(524770-524872)
chr7 (53-179)||(16535674-16535797)
chr7 (53-179)||(16629865-16629988)
chr7 (48-83)||(23707051-23707086)
chr7 (49-136)||(36875268-36875355)
chr7 (48-114)||(1032947-1033013)
chr7 (165-243)||(7209309-7209387)
chr7 (18-88)||(22701215-22701285)
chr7 (59-120)||(43908752-43908814)
chr7 (18-103)||(20306701-20306786)
chr7 (18-78)||(27456471-27456531)
[»] chr1 (41 HSPs)
chr1 (28-127)||(8268716-8268815)
chr1 (18-175)||(35992499-35992656)
chr1 (18-243)||(32910267-32910487)
chr1 (29-132)||(35980187-35980290)
chr1 (18-132)||(10847430-10847544)
chr1 (18-179)||(17651780-17651938)
chr1 (29-132)||(34914199-34914300)
chr1 (29-243)||(36203346-36203561)
chr1 (18-132)||(382132-382246)
chr1 (29-146)||(15880060-15880175)
chr1 (29-132)||(32937993-32938095)
chr1 (29-179)||(8165456-8165605)
chr1 (18-207)||(11074294-11074481)
chr1 (18-262)||(12973505-12973748)
chr1 (18-186)||(23475007-23475173)
chr1 (29-179)||(25559909-25560053)
chr1 (18-126)||(16537738-16537848)
chr1 (22-132)||(9962048-9962159)
chr1 (18-179)||(17989075-17989236)
chr1 (29-127)||(19051184-19051280)
chr1 (29-178)||(26344962-26345111)
chr1 (29-187)||(39158233-39158385)
chr1 (29-208)||(50153408-50153584)
chr1 (19-93)||(15882053-15882127)
chr1 (18-136)||(44055795-44055912)
chr1 (49-126)||(9330458-9330534)
chr1 (52-116)||(50951967-50952031)
chr1 (18-81)||(25532835-25532897)
chr1 (29-79)||(6694282-6694332)
chr1 (18-132)||(40095314-40095428)
chr1 (28-101)||(47984409-47984482)
chr1 (50-126)||(9250035-9250110)
chr1 (28-83)||(25506981-25507036)
chr1 (18-65)||(29923212-29923259)
chr1 (149-263)||(2490052-2490166)
chr1 (29-141)||(6248138-6248249)
chr1 (160-206)||(9330388-9330434)
chr1 (43-132)||(50471297-50471386)
chr1 (48-101)||(21907005-21907058)
chr1 (165-262)||(51252455-51252552)
chr1 (29-92)||(36797946-36798010)
[»] chr8 (25 HSPs)
chr8 (33-187)||(6591248-6591401)
chr8 (33-187)||(6616943-6617096)
chr8 (29-132)||(9012749-9012849)
chr8 (28-132)||(40436507-40436608)
chr8 (29-253)||(15272210-15272434)
chr8 (29-253)||(15452579-15452803)
chr8 (29-127)||(3129474-3129570)
chr8 (18-92)||(12074087-12074161)
chr8 (18-87)||(12912604-12912673)
chr8 (49-110)||(28073125-28073186)
chr8 (49-126)||(29914524-29914601)
chr8 (85-253)||(44336726-44336893)
chr8 (50-86)||(14185804-14185840)
chr8 (29-81)||(38926340-38926392)
chr8 (31-136)||(12660171-12660277)
chr8 (29-243)||(4785200-4785409)
chr8 (96-262)||(33565900-33566068)
chr8 (18-90)||(7428339-7428410)
chr8 (29-80)||(31497512-31497563)
chr8 (18-76)||(19539518-19539576)
chr8 (49-120)||(28441576-28441646)
chr8 (29-65)||(12193376-12193412)
chr8 (29-65)||(12437804-12437840)
chr8 (29-81)||(22811095-22811147)
chr8 (29-69)||(33566082-33566122)
[»] scaffold0204 (2 HSPs)
scaffold0204 (28-187)||(25883-26037)
scaffold0204 (29-260)||(14470-14694)
[»] scaffold0470 (1 HSPs)
scaffold0470 (33-187)||(6261-6414)
[»] scaffold0664 (1 HSPs)
scaffold0664 (18-173)||(6030-6185)
[»] scaffold0688 (2 HSPs)
scaffold0688 (18-88)||(1277-1346)
scaffold0688 (18-88)||(7846-7915)
[»] scaffold0013 (2 HSPs)
scaffold0013 (165-262)||(128582-128679)
scaffold0013 (160-262)||(105975-106077)
[»] scaffold0059 (1 HSPs)
scaffold0059 (165-262)||(69580-69677)
[»] scaffold0012 (1 HSPs)
scaffold0012 (59-100)||(241135-241176)


Alignment Details
Target: chr6 (Bit Score: 377; Significance: 0; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 18 - 406
Target Start/End: Complemental strand, 14564617 - 14564229
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14564617 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 14564518  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttgga 217  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14564517 aacccaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactgaaccaattcatattcttttttatcttggtgtttgga 14564418  T
Q  218 tgactcttaatttcaaaatcgaaccacactgcaccggaaacaccctatgatatgtagtaatggagagtttgaattccttgtttcaagtatttgaaccttc 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14564417 tgactcttaatttcaaaatcgaaccacactgcaccggaaacaccctatgatatgtagtaatggagagtttgaattccttgtttcaagtatttgaaccttc 14564318  T
Q  318 aaacataaacaagtctctactacgccacactccaaattagtctgagcaataataacctaacacactctttgttttttgcttctcctttg 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14564317 aaacataaacaagtctctactacgccacactccaaattagtctgagcaataataacctaacacactctttgttttttgcttctcctttg 14564229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 30752720 - 30752530
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctag-taaaaaaccgcaacaaccgatc 116  Q
    ||||| |||| ||||||||| |||||||||||||||||| |||||| | ||| |||||||||||||||||||||| |  ||||||||||| ||| ||||     
T  30752720 aacatcgttaaaaatatgttatgttttagttttttaactcgattttgaagttggaaacaaaaaattgtattgtctcgaaaaaaaaccgcaccaaacgatt 30752621  T
Q  117 caacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttg 208  Q
    ||||||||||| |||| ||| |||||| |||  || | |||| |||| ||||||||||||||| ||||||| ||  || |||||||||||||    
T  30752620 caacctaaaccgcattggtttgatttggtttgttttgaattttattt-aaaagtcaaccgaaccaaaccaaaccgcatgcttttttatcttg 30752530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 8064659 - 8064565
Alignment:
Q  33 atgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||    
T  8064659 atgttgtgttttagctttttaacttgattttaatgttggaaacaaaaaattgtattatctagtaaaaaaccgcaccaaccgattcaacccaaacc 8064565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 892234 - 892403
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| ||||||||||||||||||||  ||| ||||| ||||||||||||  |||||||||||| |||||||| | ||||||||||| ||||| ||||    
T  892234 aacattgctagaaatatgttgtgttttaactttctaactcgattttaatgttgaaaacaaaaaattatattgtctcg-aaaaaaccgcatcaaccaatcc 892332  T
Q  118 aacctaaaccacatttg-ttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    |||| |||||||||| | ||   |||| |||||||||||| | |||| |||||| |||||||| |||||||    
T  892333 aacccaaaccacattggtttttgtttggtttagttcggatgttattttaaaagttaaccgaaccaaaccaa 892403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 19135006 - 19135174
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| | ||||||||  ||||||||  ||||||||| ||||||||||||  ||||||||||||||||||||||  |||||||| || ||||||||||    
T  19135006 aacattgctggaaatatgccgtgttttacctttttaactcgattttaatgttgaaaacaaaaaattgtattgtcta-aaaaaaaccacatcaaccgatcc 19135104  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    || | ||| | |||| ||| |||||| ||| ||||  |||| |||| ||||||||||||||| |||||||    
T  19135105 aatccaaatcgcattagtttgatttggtttggttcatattttattttaaaagtcaaccgaaccaaaccaa 19135174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 17306541 - 17306429
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| ||||| ||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||||| | ||||||||||||| |||| || ||    
T  17306541 aacattgctagaagtatgtcgtgttttaactttttaacttgattttaataat-gaaacaaaaaattgtattgtatggtaaaaaaccgcaccaactgaacc 17306443  T
Q  118 aacctaaaccacat 131  Q
    || | |||||||||    
T  17306442 aaaccaaaccacat 17306429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 4563029 - 4562966
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    |||||||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  4563029 aaatatgttgtgttatagctttttaactcgattttaatgttggaaacaaaaaattgtattgtct 4562966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 28633122 - 28633010
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||||||||||||||| |||||  ||||||| | |||| ||||||| ||||  ||||||| |||||||| | ||||||||||| ||||||||||    
T  28633122 aacattgttagaaatatgttgtattttacctttttaaatcgattctaatgtt-gaaaacaaaaattatattgtctcg-aaaaaaccgcatcaaccgatcc 28633025  T
Q  118 aacctaaaccacatt 132  Q
    |||| ||||| ||||    
T  28633024 aaccaaaaccgcatt 28633010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 32190591 - 32190720
Alignment:
Q  48 tttttaacttgattttaatgttcgaaac--aaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgat 145  Q
    |||||||||| ||||||||||| ||||   ||||||||||||||| | | ||||||||||| |||||||||||||  ||||  |||||||| | |||| |    
T  32190591 tttttaacttaattttaatgttggaaattaaaaaaattgtattgttttgaaaaaaaccgcaccaaccgatccaactcaaactgcatttgtttggtttggt 32190690  T
Q  146 ttagttcggatttgatttaaaaagtcaacc 175  Q
    |||||| |||||| |||| |||||| ||||    
T  32190691 ttagtttggattttattttaaaagttaacc 32190720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 12108472 - 12108576
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaac--aaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||||||||||||||  |||||||||| ||||||||||| |||||  |||||||||||||||||   ||||||| ||| ||||||||| |||  ||||    
T  12108472 aaatatgttgtgttttacctttttaacttaattttaatgttggaaacaaaaaaaattgtattgtct-caaaaaaactgcaccaaccgatctaacgcaaac 12108570  T
Q  127 cacatt 132  Q
    ||||||    
T  12108571 cacatt 12108576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 20500729 - 20500634
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||||||||  || | ||||   ||||||||||| ||||| |||||||| ||||    
T  20500729 aaatatgttgtgttttagatttttaacttgattttaatgttgtaaacaaaaaaacgtgtcgtct--caaaaaaccgcaccaaccaatccaacccaaac 20500634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 29048291 - 29048212
Alignment:
Q  31 atatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaacc 112  Q
    |||||||||||||||  ||||||| |||||||||||||| ||||||||||| | |||||||||  ||||||||||| |||||    
T  29048291 atatgttgtgttttaactttttaatttgattttaatgttggaaacaaaaaaatttattgtcta--aaaaaaccgcaccaacc 29048212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 28610770 - 28610688
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    |||||||||||||||| ||||  ||||||||||||||||||||| | ||||||| ||||||||||| |||| | ||||| ||||    
T  28610770 ttttaacttgattttattgttgaaaacaaaaaattgtattgtcttg-aaaaaactgcaacaaccgaaccaatccaaaccgcatt 28610688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 7676249 - 7676323
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    |||||||||  ||||||||||| |||||  ||||||||| ||||||||||||  ||| |||||||||||||||||    
T  7676249 aacattgttgaaaatatgttgtattttacctttttaactcgattttaatgtttaaaagaaaaaattgtattgtct 7676323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 24644857 - 24644905
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaat 66  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||    
T  24644857 aacattgttgaaaatatgttgtgttttagttttttaatttgattttaat 24644905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 31945340 - 31945392
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    |||||||||||||||||| ||||||| ||||||||||| || |||||||||||    
T  31945340 aaatatgttgtgttttagctttttaatttgattttaatattggaaacaaaaaa 31945392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 13532189 - 13532275
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatc 116  Q
    |||| ||||||||||  | |||||||||||||||||||||| | || |||||||||||| |||| | ||||||| ||| |||||||||    
T  13532189 aaatttgttgtgtttcggctttttaacttgattttaatgttgggaa-aaaaaattgtatcgtcttgaaaaaaactgcaccaaccgatc 13532275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 7170072 - 7170149
Alignment:
Q  100 aaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccga 177  Q
    ||||||| |||||||||||| | |||||||||| ||| |||||| ||| ||| | |||| |||| |||||||||||||    
T  7170072 aaccgcaccaaccgatccaatccaaaccacattggtttgatttggtttggtttgaattttattttaaaagtcaaccga 7170149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 13859295 - 13859383
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaac 120  Q
    |||||||||||||| ||   |||||||||||||||| |||| ||||  ||||||||||||||||   |||||||| || |||||||||||||    
T  13859295 aaatatgttgtgttataaccttttaacttgattttagtgttggaaa-taaaaattgtattgtct--caaaaaaccacatcaaccgatccaac 13859383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 252
Target Start/End: Complemental strand, 22413949 - 22413793
Alignment:
Q  96 aaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatatt 195  Q
    ||||||||||| |||||||||||  | ||||| |||| |||   |||| ||| |||| ||||| |||| ||||||||||||||| ||||||| ||  ||     
T  22413949 aaaaaaccgcaccaaccgatccattccaaaccgcattggtttcgtttgtttttgttcagattttattttaaaagtcaaccgaaccaaaccaaaccgcata 22413850  T
Q  196 cttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcacc 252  Q
    ||| ||||||||   ||| |||||||| ||||  |||||| | || || ||||||||    
T  22413849 cttatttatcttctggttcggatgacttttaacctcaaaaccaaatcaaactgcacc 22413793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 9686230 - 9686163
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgt 85  Q
    |||||||||  ||||| |||||||||||| ||||||| |||||||||| ||| |||| |||| |||||    
T  9686230 aacattgttgaaaataagttgtgttttagctttttaatttgattttaacgttggaaaaaaaatattgt 9686163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 14940596 - 14940634
Alignment:
Q  149 gttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  14940596 gttcggattttatttaaaaagtcaaccgaaccaaaccaa 14940634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 29048189 - 29048147
Alignment:
Q  145 tttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  29048189 tttagttcggattttattttaaaagtcaaccgaaccaaaccaa 29048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 4577271 - 4577206
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaatt 83  Q
    |||||| || ||||||||||||||| ||  ||||||||| ||||||||||||  ||| ||||||||    
T  4577271 aacattattggaaatatgttgtgttataagtttttaactcgattttaatgttaaaaataaaaaatt 4577206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 27571939 - 27572182
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| | ||||||||| |||||||| ||||||||||  ||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||||||    
T  27571939 aacattgctggaaatatgtcgtgttttacttttttaactcaattttaatgttggaaacaaaaaattgtattgtctcg-aaaaaaccgcaccaaccgatcc 27572037  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttgga 217  Q
    |||| ||||| |||| ||| | |||| ||| |||||||||| |||| ||||| ||||||||| ||||||| ||  || |||||||| ||||  ||| |||    
T  27572038 aacccaaaccgcattggtttggtttggtttggttcggattttattttaaaagacaaccgaaccaaaccaaaccgcatgcttttttaccttgcggttcgga 27572137  T
Q  218 tgactcttaatttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
    ||||| ||||  |||||| ||||||| || |||||| ||||||||    
T  27572138 tgacttttaacctcaaaaccgaaccaaaccgcaccgcaaacaccc 27572182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 34969510 - 34969353
Alignment:
Q  21 attgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaac 120  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||   ||||||| |||| |||||||||||||    
T  34969510 attgttggaagtatgttgtgttttagttttttaacttgattttaatgtt-gaaaacaaaaattgtattgtcccataaaaaatcgcatcaaccgatccaac 34969412  T
Q  121 ctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaac 179  Q
    | ||| |||||| ||| | |||||||  |||   |||| |||| |||||||||||||||    
T  34969411 ccaaatcacattggtttggtttgattaggtttaaattttattttaaaagtcaaccgaac 34969353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 2589156 - 2589045
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaa--aaaaccgcaacaaccgat 115  Q
    |||||||  |||| ||||||||||||||  ||||||||||||||||||  || |||||||||||||||||||||||||||  ||||||||| ||||||||    
T  2589156 aacattgccagaagtatgttgtgttttaactttttaacttgattttaaaattggaaacaaaaaattgtattgtctagtaaaaaaaaccgcaccaaccgat 2589057  T
Q  116 ccaacctaaacc 127  Q
    |||||| |||||    
T  2589056 ccaacccaaacc 2589045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 18845697 - 18845587
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagt-aaaaaaccgcaacaaccgatc 116  Q
    ||||||| ||||| ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| |||| || ||||||  ||| |||||||||    
T  18845697 aacattgctagaattatgttgtgttttggctttttaacttgattttaatgttggaaacaaaaaattgtatcgtctggtaaaaaaaatgcaccaaccgatc 18845598  T
Q  117 caacctaaacc 127  Q
    ||||| |||||    
T  18845597 caacccaaacc 18845587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 11402767 - 11402665
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||   |||||| |||| |||| |||| |||| ||||||    
T  11402767 aaatatgttgtgtttcagctttttaacttgattttaatgttggaaacaaaaaattgtatcgtct-taaaaaaatcgcaccaactgatctaacccaaacca 11402669  T
Q  129 catt 132  Q
    ||||    
T  11402668 catt 11402665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 26007271 - 26007459
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||  |||| | ||||| |||||||||  | |||||||||  |||||||||    
T  26007271 aacattgttggaaatatgttgtgttatagctttttaacttgattttaatgttgaaaacgacaaattatattgtcta-aataaaaccgcactaaccgatcc 26007369  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttg 208  Q
    |||  | ||||| ||  || | |||| ||| |||| ||||| |||| |||||| |||| ||| ||| ||| ||||||  ||||||||||||    
T  26007370 aactcagaccacgttaatttggtttggtttggttcagattttattttaaaagtaaaccaaaccaaatcaa-ccatatgtttttttatcttg 26007459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 14652627 - 14652534
Alignment:
Q  29 aaatatgttgtgttttag-ttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacc 121  Q
    ||||||||||||||| || |||||||||||||||||||||||  ||||||||||||| || |||| | ||||||| ||| ||||||||||||||    
T  14652627 aaatatgttgtgtttaagcttttttaacttgattttaatgttgaaaacaaaaaattgcatcgtctcgaaaaaaactgcaccaaccgatccaacc 14652534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 7487217 - 7487292
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtcta 93  Q
    |||||||||||||||||||||||| |||  |||||||||| ||||||||||  |||||||||||| ||||||||||    
T  7487217 aacattgttagaaatatgttgtgtcttacctttttaacttaattttaatgtctgaaacaaaaaatcgtattgtcta 7487292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 6595155 - 6595006
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  |||||||  ||||||||||||| |||||||||||   ||| |||||  ||||||| ||| |||||||||||||| ||||||    
T  6595155 aaatatgttgtgttttaactttttaatctgattttaatgttggaaacaaaaaaaattatcgtcta-aaaaaaactgcatcaaccgatccaacccaaacca 6595057  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaac 179  Q
    |||| ||| | |||| |||  || |||| | ||||  ||||||||||||||    
T  6595056 cattagtttggtttggtttgatttggatgttatttttaaagtcaaccgaac 6595006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 41455042 - 41454892
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaa-aaaattgtattgtctagtaa-aaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||||||| ||||   |||| |||  ||| ||||||||| |||| ||||||| | ||||    
T  41455042 aaatatgttgtgttttagctttttaatttgattttaatgttggaaacaaaaaaaaattattatct--taacaaaaccgcaccaacagatccaatccaaac 41454945  T
Q  127 cacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaac 179  Q
    | |||| ||| | |||| ||| |||| ||||| |||| |||||||||||||||    
T  41454944 cgcattggtttggtttggtttggttcagattttattttaaaagtcaaccgaac 41454892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 2422972 - 2422878
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||||| ||||||||  ||||||||| |||||||||||| |||||||||| |||||||||   || ||||||||||  ||||||||||| ||||||    
T  2422972 aaatatgtcgtgttttacctttttaactcgattttaatgttagaaacaaaaacttgtattgt---gtgaaaaaccgcactaaccgatccaatctaaac 2422878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 733957 - 734039
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacat 131  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||| | |||||||| |||||||||| || ||  |||||||||    
T  733957 ttttagcttgattttaatgttggaaacaaaaagttgtattgtctcgcaaaaaacctcaacaaccgaacctactaaaaccacat 734039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 22747466 - 22747627
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagtttttt-aacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatc 116  Q
    |||||||||  |||||| || |||| ||||||||| |||| |||||||||||| | ||||||||||  |||||||| | ||||||| ||| |||||||||    
T  22747466 aacattgttgaaaatatattttgttatagtttttttaactcgattttaatgttggtaacaaaaaataatattgtctcg-aaaaaactgcaccaaccgatc 22747564  T
Q  117 caacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaac 179  Q
    ||||| ||||  |||| ||| | |||| ||| ||||  |||| |||| ||||||||| |||||    
T  22747565 caacccaaactgcattagtttggtttggttttgttcaaattttattttaaaagtcaatcgaac 22747627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 691467 - 691519
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  691467 aaatatgttgtgttttaactttttaacttgattttaatgttggaaacaaaaaa 691519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 262
Target Start/End: Complemental strand, 18432258 - 18432024
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  ||||||||| |||||||||||   |||||||||||||| |||||| | | |||| | || ||| |||||||||| ||||||    
T  18432258 aaatatgttgtgttttacctttttaactcgattttaatgtcgaaaacaaaaaattgtgttgtctcg-agaaaaacacaccaatcgatccaacccaaacca 18432160  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa--tccatattcttttttatcttggtgtttggatgactctta 226  Q
     | |   | | |||| ||| ||| |||||| |||| |||||||||||||| ||||| ||   |||| || |||||||||||   ||| |||||||| |||    
T  18432159 aagtgtattggtttggttttgtttggattttattttaaaagtcaaccgaattaaacaaaaccccatgtttttttttatcttacagttcggatgactttta 18432060  T
Q  227 atttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
    |  | |||| ||||  | ||||||||| ||||||||    
T  18432059 acctaaaaaccgaagtaaactgcaccgaaaacaccc 18432024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 563805 - 563877
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    ||||||| |||||||||| ||| |||||| |||||||||| ||||||||||| |||  |||||||||||||||||    
T  563805 aacattgctagaaatatgatgtattttagctttttaactttattttaatgttggaa--aaaaaattgtattgtct 563877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 1681274 - 1681204
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaatt-gtattgtctagtaaaaaaccgcaacaaccgatccaa 119  Q
    ||||||||||||||||| ||| |||| |||||||| ||||||||| ||||||||||||||||||||| ||||    
T  1681274 ttttaacttgattttaacgtt-gaaataaaaaatttgtattgtctcgtaaaaaaccgcaacaaccgaaccaa 1681204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 7591459 - 7591532
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    ||||||||| |||||||||||| |||||  |||||||||| |||||||||||  |||||||||||| ||||||||    
T  7591459 aacattgttggaaatatgttgtattttaactttttaactt-attttaatgttgaaaacaaaaaattatattgtct 7591532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 34881224 - 34881297
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    ||||||||| |||||| |||||||||||| ||||||||||||||||||| |   |||||||||||| ||||||||    
T  34881224 aacattgtt-gaaatacgttgtgttttagatttttaacttgattttaatatagaaaacaaaaaattatattgtct 34881297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 36760283 - 36760179
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct--agtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||||||||||||||  |||||||||  |||||||  || ||||||||||||||||||||||  |  |||||| |||| |||||||||||||  ||||    
T  36760283 aaatatgttgtgttttaaatttttaactc-attttaaatttggaaacaaaaaattgtattgtctcaaaaaaaaaaacgcaccaaccgatccaactcaaac 36760185  T
Q  127 cacatt 132  Q
    ||||||    
T  36760184 cacatt 36760179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 6633492 - 6633341
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  ||||||||| ||||||||||||  ||||||||||   ||||| ||   |||||||| || |||||||||||||  ||||||    
T  6633492 aaatatgttgtgttttacctttttaactggattttaatgttgaaaacaaaaaaaaatattggct-caaaaaaaccacatcaaccgatccaactcaaacca 6633394  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaacca 186  Q
    ||||     | |||| ||| |||| ||||| |||| ||||||||||| ||| ||||||    
T  6633393 catt-----ggtttggtttggttcagattttattttaaaagtcaaccaaaccaaacca 6633341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 20191890 - 20192033
Alignment:
Q  31 atatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgt-attgtctagtaaaaaaccgcaacaaccgatccaacctaaaccac 129  Q
    ||||||||||||||||||| |||||||| ||||||||||  ||||||||||   | ||||| | |  ||||||||||  |||||||||||   ||||| |    
T  20191890 atatgttgtgttttagtttattaacttg-ttttaatgttgaaaacaaaaaaaaattattgtatcgataaaaaccgcacaaaccgatccaattcaaaccgc 20191988  T
Q  130 atttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaac 179  Q
    ||| |||     ||||||||||||||||| |||| |||||||||||||||    
T  20191989 attggtt-----tgatttagttcggattttattttaaaagtcaaccgaac 20192033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 6718761 - 6718646
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct--agtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||| ||||||| ||| |||||||||  ||||||| |||  |||||||||||||||||||||  |  |||||| |||| ||||| |||||||| ||||    
T  6718761 aaatatattgtgttatagctttttaactcaattttaacgttaaaaacaaaaaattgtattgtcttaaaaaaaaaaacgcatcaaccaatccaacccaaac 6718662  T
Q  127 cacatttgttcgattt 142  Q
    | |||| ||| |||||    
T  6718661 cgcattggtttgattt 6718646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 22415480 - 22415397
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaac 102  Q
    ||||||||| |||||| ||||| |||||  ||||||| |||||||||||||| |||||||||| ||| ||||||| | |||||||    
T  22415480 aacattgttggaaataagttgt-ttttaactttttaaattgattttaatgttagaaacaaaaagttggattgtctcgcaaaaaac 22415397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 25495270 - 25495207
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    |||||||||  |||||||||||||||||  ||||||| ||||||||||||||  ||||||||||    
T  25495270 aacattgttgaaaatatgttgtgttttacctttttaatttgattttaatgttgaaaacaaaaaa 25495207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 38176377 - 38176440
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||||| ||||||| ||||||| ||| ||||||||| |||||||||||| |||| ||||||    
T  38176377 aacattgttggaaatatattgtgttatagctttttaactcgattttaatgttggaaataaaaaa 38176440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 38203601 - 38203664
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||||| ||||||| ||||||| ||| ||||||||| |||||||||||| |||| ||||||    
T  38203601 aacattgttggaaatatattgtgttatagctttttaactcgattttaatgttggaaataaaaaa 38203664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 12264016 - 12263922
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgattt 142  Q
    |||||| ||| ||||| |||||  |||||||||| |||||| ||| | |||||||| |||||| ||| ||||||||||||| ||| ||| |||||    
T  12264016 tttttatctttattttgatgttgaaaacaaaaaaatgtattttctcgcaaaaaaccacaacaatcgaaccaacctaaaccatattagtttgattt 12263922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 6367769 - 6367822
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaa 101  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||| | ||||||    
T  6367769 tttttaactttattttaatgttggaaacaaagaattgtattgtctcgcaaaaaa 6367822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 40884493 - 40884440
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    |||||||||| |||||||| ||||||| |||||||||||||| |||| ||||||    
T  40884493 gaaatatgttatgttttagctttttaatttgattttaatgttggaaataaaaaa 40884440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 6895262 - 6895345
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    |||||||||| ||||||||||  ||||||| ||||||||||||||  || ||||||||| |||| |||| |||  ||||||||||    
T  6895262 tttttaacttaattttaatgtgggaaacaacaaattgtattgtct-ctacaaaaccgcatcaactgatctaactcaaaccacatt 6895345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 34881337 - 34881421
Alignment:
Q  138 gatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgact 222  Q
    ||||||| || |||| ||||| |||| |||||||||| |||||||||||| || | | ||||||||||| |  ||||||||||||    
T  34881337 gatttgactttgttcagatttaattttaaaagtcaactgaactaaaccaaaccgtttgcttttttatctcgtggtttggatgact 34881421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 36567884 - 36567844
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgtt 69  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  36567884 aaatatgttgtgttttagctttttaatttgattttaatgtt 36567844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 40109515 - 40109567
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||||||||||| ||||||| |||||||||| ||||||  ||||||||||    
T  40109515 aaatatgttgtgtttaagtttttcaacttgatttcaatgttgaaaacaaaaaa 40109567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 40884383 - 40884292
Alignment:
Q  155 atttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacac 246  Q
    |||| |||| ||||||| ||||||||||||||| |   || |||||||||||||  ||| | |||||| ||||  |||||||||||||||||    
T  40884383 attttattttaaaagtcgaccgaactaaaccaaacagcatacttttttatcttgcggttcgaatgacttttaacctcaaaatcgaaccacac 40884292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 34111674 - 34111748
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    ||||||| | ||||||||||| || |||  ||||||| |||||||| || ||  |||||||||||||||||||||    
T  34111674 aacattgctggaaatatgttgcgtgttacctttttaatttgattttgatattaaaaacaaaaaattgtattgtct 34111748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 40331507 - 40331552
Alignment:
Q  142 tgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    |||||| |||||||||| |||| ||||||||||||||| |||||||    
T  40331507 tgatttggttcggattttattttaaaagtcaaccgaaccaaaccaa 40331552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 12378942 - 12379033
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgta-ttgtctagtaaaaaaccgcaacaaccgatccaac 120  Q
    |||||| ||||||||||  ||||||||| ||||||| |||| |||||||||||    | |||||| | ||||||||||| |||||||||||||    
T  12378942 aaatatattgtgttttacctttttaactcgattttattgttagaaacaaaaaaaaaaaattgtctcg-aaaaaaccgcaccaaccgatccaac 12379033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 23411861 - 23411797
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    ||||||||||| |||||||  || | | ||||||||||||||  ||||||||||||| |||||||    
T  23411861 gaaatatgttgcgttttagccttatgatttgattttaatgttgaaaacaaaaaattgaattgtct 23411797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 26690036 - 26690000
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaa 65  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  26690036 aaatatgttgtgttatagctttttaacttgattttaa 26690000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 26959768 - 26959732
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaa 65  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  26959768 aaatatgttgtgttatagctttttaacttgattttaa 26959732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 33792841 - 33792789
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    |||||||||||||||||  ||||||| |||||||||| |||  ||||||||||    
T  33792841 aaatatgttgtgttttacctttttaatttgattttaacgttgaaaacaaaaaa 33792789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 8e-37; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 29 - 243
Target Start/End: Original strand, 17144635 - 17144847
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||||||||||||||||||||||||||||||||| |||||  ||| ||||||||||||| | ||  ||||||||||| |||||||||||||| ||||||    
T  17144635 aaatatgttgtgttttagttttttaacttgattttgatgttgaaaagaaaaaattgtatt-tataaaaaaaaaccgcatcaaccgatccaacccaaacca 17144733  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaat 228  Q
    |||| ||| |  ||| |||  ||||||||  |||| ||||||||||||||| ||||||||||  || | |||||||||||  |||||||||||| |||      
T  17144734 cattggtttggcttggtttgcttcggattctattttaaaagtcaaccgaaccaaaccaatccgcatac-tttttatcttgcggtttggatgacttttagc 17144832  T
Q  229 ttcaaaatcgaacca 243  Q
     |||||| |||||||    
T  17144833 ctcaaaaccgaacca 17144847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 8557863 - 8558006
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| |||||  |||||||||||  ||||||||| ||| |||||     
T  8557863 aaatatgttgtgtttaagctttttaacttgattttaatgttggaaacaaaaaattgtatcgtcta-aaaaaaaccgcacaaaccgatccgacccaaaccg 8557961  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaa 173  Q
    |||| ||| | |||| ||| |||||||||| ||||  ||||||||    
T  8557962 cattggtttggtttggtttggttcggattttatttttaaagtcaa 8558006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 187
Target Start/End: Original strand, 2832298 - 2832456
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    |||||| |||||||||||  |||| |||| ||||||||||||  ||||| |||||||||||||||   ||||| ||||| ||||||||| |||| |||||    
T  2832298 gaaatacgttgtgttttaccttttaaactcgattttaatgttgaaaacataaaattgtattgtctca-aaaaacccgcaccaaccgatcaaacccaaacc 2832396  T
Q  128 acatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
     |||| ||| |||||| |||  ||||||||| |||| ||||||||||||||| |||||||    
T  2832397 gcattggtttgatttggtttgattcggattttattttaaaagtcaaccgaaccaaaccaa 2832456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 260
Target Start/End: Original strand, 55467562 - 55467777
Alignment:
Q  38 gtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttc 137  Q
    ||||||||  ||||||| |||||||||||||| |||||||||||   |||||||||  ||||||||||| |||| ||||||| | ||||| ||||         
T  55467562 gtgttttatctttttaatttgattttaatgttggaaacaaaaaaaaatattgtcta--aaaaaaccgcaccaactgatccaatccaaaccgcatt----- 55467654  T
Q  138 gatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatc 237  Q
    | |||||||| |||||||||| |||| ||||||||||||||| ||||||| ||  || ||| |||||||||  ||| |||||||| |||   |||||| |    
T  55467655 ggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttatttatcttgcagttcggatgacttttagcctcaaaacc 55467754  T
Q  238 gaaccacactgcaccggaaacac 260  Q
    |||||| || |||||| ||||||    
T  55467755 gaaccaaaccgcaccgcaaacac 55467777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 253
Target Start/End: Complemental strand, 20846646 - 20846424
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||||||||||||||| ||||||||||  |||||||||||  ||| ||||||||||| | ||| | ||||||||||| |||||||||||||| |||||     
T  20846646 aaatatgttgtgttttacttttttaactc-attttaatgttgaaaataaaaaattgtaat-tctcg-aaaaaaccgcaccaaccgatccaacccaaaccg 20846550  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa--tccatattcttttttatcttggtgtttggatgactctta 226  Q
    |||| ||| ||||||  || ||| |||||| |||| ||||||||||||||| |||||||    ||| |  ||||||||||||  ||| |||||||| |||    
T  20846549 cattggtttgatttg-gttggtttggattttattttaaaagtcaaccgaaccaaaccaaagcgcatgtatttttttatcttgcggttcggatgactttta 20846451  T
Q  227 atttcaaaatcgaaccacactgcaccg 253  Q
     | || ||| ||||||| |||||||||    
T  20846450 ctctcgaaaccgaaccaaactgcaccg 20846424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 10481542 - 10481707
Alignment:
Q  21 attgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaac 120  Q
    |||||| ||||||||  | ||| ||| |||||||||| |||| ||||||  ||||||||||||||||||| | |  |||||||||| |||||||||||||    
T  10481542 attgttggaaatatgccgcgttctagctttttaactttattt-aatgttaaaaacaaaaaattgtattgtgttgagaaaaaccgcatcaaccgatccaac 10481640  T
Q  121 ctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
      |||||||||| ||| |||||| |||  |||  |||| |||| ||||||||||||||| |||||||    
T  10481641 tcaaaccacattggtttgatttggtttgattcaaattttattttaaaagtcaaccgaaccaaaccaa 10481707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 25465985 - 25465902
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaa 101  Q
    |||||||||  ||||||||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||| | ||||||    
T  25465985 aacattgttgaaaatatgttgtgttttagccttttaacttgattttaatgttgaaaacaaaaaattgtattgtcttgaaaaaaa 25465902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 37045493 - 37045383
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  |||||| |||||||| || |||||| ||||||||||||||| |||||||||||| |||| |||  | ||||||||||| |||||||| |    
T  37045493 aacattgttgaaaatatattgtgtttcagctttttatcttgattttaatgttggaaacaaaaaatcgtatcgtcacgaaaaaaaccgcaccaaccgatac 37045394  T
Q  118 aacctaaacca 128  Q
    |||| ||||||    
T  37045393 aacccaaacca 37045383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 26758397 - 26758204
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||| ||||||| || ||||||||||| ||||  |||||    ||||||||  ||||||||||| |||||||| ||||| |||||     
T  26758397 aaatatgttgtgttttagctttttaatttaattttaatgttggaaatgaaaaaa---attgtcta--aaaaaaccgcaccaaccgatacaacccaaaccg 26758303  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaa 227  Q
    |||| |||   |||| ||| | || || || |||| ||||||||||||||| ||||||| || ||| ||| |||||||||  ||| |||||||| ||||    
T  26758302 cattggtttagtttggtttggatcagactttattttaaaagtcaaccgaaccaaaccaaaccgtatacttatttatcttgcggttcggatgacttttaa 26758204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 55129896 - 55129800
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||||||||||||||| |||||||||| ||||||||||  ||||||| |||||||||||||| | | |||||| ||  ||||||||||||||||||    
T  55129896 aaatatgttgtgttttagatttttaacttaattttaatgtcagaaacaacaaattgtattgtctcg-acaaaaccacactaaccgatccaacctaaac 55129800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 52632217 - 52632110
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| || |||||||||||| ||||  ||||||||| |||||||||||| ||||||||||||| | |||||| | ||||||||||| ||||| ||||    
T  52632217 aacattgctaaaaatatgttgtgctttacatttttaactcgattttaatgttggaaacaaaaaattatgttgtcttg-aaaaaaccgcaccaaccaatcc 52632119  T
Q  118 aacctaaac 126  Q
    |||| ||||    
T  52632118 aacccaaac 52632110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 5681430 - 5681512
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||||| | |||||||||||| ||||| ||||    
T  5681430 ttttaacttgattttaatgttggaaacaaaaaattgtattctctcg-aaaaaaccgcaccgaccgatccaacccaaaccgcatt 5681512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 38651903 - 38652006
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  |||||||| ||||||||| ||| |||||||||||   || ||||| | ||||||||||| |||||||||||||| |||||     
T  38651903 aaatatgttgtgttttaactttttaacctgattttaacgttggaaacaaaaaaaattaatgtctcggaaaaaaccgcatcaaccgatccaacccaaaccg 38652002  T
Q  129 catt 132  Q
    ||||    
T  38652003 catt 38652006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 4554863 - 4554706
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  |||||||| | |||||||||||  |||||||||| | ||| |||||  ||||||||||| |||||||||||||  |||||     
T  4554863 aaatatgttgtgttttaactttttaacctaattttaatgttgcaaacaaaaaaatttatcgtcta-aaaaaaaccgcatcaaccgatccaactcaaaccg 4554765  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    |||| ||| | |||| ||| ||| |||| | | ||  |||||||||||||| |||||||    
T  4554764 cattagtttggtttggtttggtttggatgttacttttaaagtcaaccgaaccaaaccaa 4554706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 5640658 - 5640735
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||||| | |||||||||||| |||||    
T  5640658 ttttaacttgattttaatgttggaaacaaaaaattgtattctctcg-aaaaaaccgcaccgaccgatccaacccaaacc 5640735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 220
Target Start/End: Original strand, 22472983 - 22473186
Alignment:
Q  20 cattgttagaaatatgttgtgttttagtttttta---acttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatc 116  Q
    |||||||  |||||||||||||||||  ||||||   |||||||||| || ||  ||||||||||||||||||||| |  |||||| ||| |||||||||    
T  22472983 cattgttgaaaatatgttgtgttttaaatttttattaacttgattttgatattgaaaacaaaaaattgtattgtctcgagaaaaactgcaccaaccgatc 22473082  T
Q  117 caacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttgg 216  Q
    ||||  |||| ||||| ||| |||||| |||| || | | || |||  ||||||||| ||||| |||||||  || ||  ||||||||| ||  ||||||    
T  22473083 caacacaaactacattggtttgatttggtttaatttgaagtttattctaaaagtcaatcgaaccaaaccaaatcacataattttttatcatgcggtttgg 22473182  T
Q  217 atga 220  Q
    ||||    
T  22473183 atga 22473186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 261
Target Start/End: Complemental strand, 54122088 - 54121967
Alignment:
Q  140 tttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcga 239  Q
    |||| ||| |||||||||| |||| ||||||||||||||| ||||||| ||  || ||||||||||||   ||| |||||||| ||||  ||||||||||    
T  54122088 tttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttttttatcttacggttcggatgacttttaacctcaaaatcga 54121989  T
Q  240 accacactgcaccggaaacacc 261  Q
    | || ||||||||| |||||||    
T  54121988 atcaaactgcaccgcaaacacc 54121967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 42363150 - 42363308
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgattt 147  Q
    |||||||||| ||||||||||| ||||||||||||| ||| |||| | ||||| |||||  || |||||||| | ||||| |||| ||| |||||| |||    
T  42363150 tttttaacttaattttaatgttggaaacaaaaaattatatcgtctcg-aaaaatccgcactaatcgatccaaaccaaaccgcattggtt-gatttggttt 42363247  T
Q  148 agttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttg 208  Q
     ||||||||||  |||  |||||||||||||| ||||||| ||  ||  ||||||||||||    
T  42363248 ggttcggattttgtttttaaagtcaaccgaaccaaaccaaaccgcatgattttttatcttg 42363308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 5671933 - 5672015
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||||| | ||||||| |||| ||||| ||||    
T  5671933 ttttaacttgattttaatgttggaaacaaaaaattgtattctctcg-aaaaaaccgcaccgaccgatctaacccaaaccgcatt 5672015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 5695695 - 5695619
Alignment:
Q  44 tagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacc 121  Q
    ||||||||||||| |||||||||||| | |||| ||||||  ||||||| | ||||||||||||||||||||||||||    
T  5695695 tagttttttaactcgattttaatgttggtaacacaaaattaaattgtctcg-aaaaaaccgcaacaaccgatccaacc 5695619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 48167445 - 48167385
Alignment:
Q  21 attgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||| |||||||||||||||||| ||||||| || ||||||||||| |||||||||||    
T  48167445 attgttaaaaatatgttgtgttttagatttttaatttcattttaatgttggaaacaaaaaa 48167385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 21238190 - 21238107
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    |||||||||||| |||||||| ||||||||||||| ||||||||   ||||||||||||||| ||| |||  ||||||| ||||    
T  21238190 ttttaacttgatcttaatgttagaaacaaaaaattatattgtctcacaaaaaaccgcaacaatcgaaccactctaaaccgcatt 21238107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 25858372 - 25858279
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaacc 112  Q
    |||||||||  ||||| ||||| |||||  ||||||||||||||||||||||  ||| |||||||| || ||||| | |||||||||||||||||    
T  25858372 aacattgttgaaaataagttgt-ttttaactttttaacttgattttaatgttgaaaataaaaaattataatgtctcgcaaaaaaccgcaacaacc 25858279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 96 - 262
Target Start/End: Original strand, 26291927 - 26292093
Alignment:
Q  96 aaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatatt 195  Q
    ||||||||||| ||||||||| |||| |||   |||| ||| |||||| ||| |||| ||||  |||| |||| |||||||||| ||| ||| ||  |      
T  26291927 aaaaaaccgcatcaaccgatctaacccaaattgcattggtttgatttggtttggttcagattctattttaaaaatcaaccgaaccaaagcaaaccgcaca 26292026  T
Q  196 cttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
     ||||||||||||  |||||||||| | ||||||| |||||||||||| || ||||||  |||||||    
T  26292027 attttttatcttgcggtttggatgatttttaattttaaaatcgaaccaaaccgcaccgcgaacaccc 26292093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 38680991 - 38680917
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    ||||||||| ||||||||||||||||||  |||||||||| |||||||| || |||||||||  || ||||||||    
T  38680991 aacattgttggaaatatgttgtgttttaactttttaacttaattttaatattggaaacaaaatgttttattgtct 38680917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 50578912 - 50579015
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||| ||||||||| |  ||||| |||||||||||||||| ||||| |||||||| || |||| | ||||   |||| ||||| |||||||| ||||||    
T  50578912 aaataagttgtgtttaatcttttttacttgattttaatgttggaaactaaaaattgaatcgtctcgaaaaagctcgcaccaaccaatccaacccaaacca 50579011  T
Q  129 catt 132  Q
    ||||    
T  50579012 catt 50579015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 51191854 - 51191704
Alignment:
Q  53 aacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttc 152  Q
    |||||||||||||| ||  |||||||| ||||| |||||| || |||||||||||||||||| |||| | ||||| ||     ||| |||| ||| ||||    
T  51191854 aacttgattttaatattgaaaacaaaatattgttttgtctggtcaaaaaccgcaacaaccgaaccaatccaaaccgca-----tcggtttggtttggttc 51191760  T
Q  153 ggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttg 208  Q
    || ||| |||| ||||  ||||||||| ||||||| ||  ||  ||||||||||||    
T  51191759 ggttttcattttaaaatccaaccgaaccaaaccaaaccgcatatttttttatcttg 51191704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 4280453 - 4280354
Alignment:
Q  29 aaatatgttgtgttttagtttttt---aacttgattttaatgttcgaaacaaaaaattgtattg--tctagtaaaaaaccgcaacaaccgatccaaccta 123  Q
    |||||||| |||||||||||||||   |||||||||||||| ||  ||||||||||||||||||  || |  |||||| |||| ||| ||||||||||||    
T  4280453 aaatatgtagtgttttagtttttttttaacttgattttaatattgaaaacaaaaaattgtattgcctcaaaaaaaaaaacgcatcaatcgatccaaccta 4280354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 45915109 - 45915208
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  ||||||||||  |||| | ||||||| |||||||||||||| |||| ||||||    ||||||||  ||||||||||| ||||||||||    
T  45915109 aacattgttgaaaatatgttgaattttggctttttaatttgattttaatgttagaaaaaaaaaaaatgattgtcta--aaaaaaccgcaccaaccgatcc 45915206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 25919166 - 25919222
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgt 85  Q
    |||||||||||||||||| ||||||| ||||||| |||||| |||| |||| |||||    
T  25919166 aaatatgttgtgttttagctttttaatttgatttaaatgttggaaaaaaaatattgt 25919222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 44651132 - 44651080
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||| ||||||| |  |||||||||||||||||||||| |||||||||||    
T  44651132 aaatatgctgtgtttcaactttttaacttgattttaatgttggaaacaaaaaa 44651080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 45629362 - 45629310
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||||| |||||||  ||||||| |||||||||||||| |||||||||||    
T  45629362 aaatatgttatgttttacctttttaatttgattttaatgttggaaacaaaaaa 45629310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 45699778 - 45699730
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaat 66  Q
    ||||||||| ||||||| |||||||||||| | ||||||||||||||||    
T  45699778 aacattgttggaaatatcttgtgttttagtctcttaacttgattttaat 45699730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 20038538 - 20038477
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaa 110  Q
    ||||||||||||||||| |||  |||| |||||||  ||||||| | |||||||||||||||    
T  20038538 ttttaacttgattttaacgttgaaaacgaaaaattagattgtctcgcaaaaaaccgcaacaa 20038477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 25089655 - 25089716
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaa 110  Q
    ||||| |||||||||| |||| |||||||||||||||||| ||| |  |||||| |||||||    
T  25089655 ttttagcttgattttattgttggaaacaaaaaattgtattttctcgcgaaaaactgcaacaa 25089716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 44662091 - 44661990
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||||| ||||| |||  ||||||||||  ||||||||||  |||||||||| | ||||| || | ||||||||||| | ||| |||||||  ||||||    
T  44662091 aaatatgctgtgtattaactttttaactttcttttaatgttgaaaacaaaaaaatttattgactcggaaaaaaccgcaccgaccaatccaacacaaacca 44661992  T
Q  129 ca 130  Q
    ||    
T  44661991 ca 44661990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 30739555 - 30739591
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattg 84  Q
    |||||||||||||||||||||| |||| |||||||||    
T  30739555 tttttaacttgattttaatgttggaaataaaaaattg 30739591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 178
Target Start/End: Complemental strand, 28790690 - 28790535
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||||| ||||||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||||| ||| | ||||||||||| ||||||||||    
T  28790690 aacattgttggaaatatgttgtgttatagctttttaactcgattttaatgttggaaacaaaaaattgtattatctcggaaaaaaccgcaccaaccgatcc 28790591  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaa 178  Q
     ||| ||||||||||     | |||| ||| ||| |||||| |||| ||||||||||||||    
T  28790590 gacccaaaccacatt-----ggtttggtttggtttggattttattttaaaagtcaaccgaa 28790535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 17762916 - 17762762
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttga-ttttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    |||||||||| ||| ||| |||||||||  | |||||||||| |||||||||||||||||||||| | ||||||||||| ||||| |||||| | |||||    
T  17762916 aaatatgttgcgttatagctttttaactcaaattttaatgttggaaacaaaaaattgtattgtctcgaaaaaaaccgcaccaaccaatccaatccaaacc 17762817  T
Q  128 acatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    |||     ||| |||||||| |||||||||| |||| ||||||||||||||| |||||||    
T  17762816 aca-----tcggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaa 17762762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 1331177 - 1331075
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  |||| |||| |||||||||||| |||||||||||||||||||||| | ||||||||||| |||| ||||||||| ||||||    
T  1331177 aaatatgttgtgttttacctttt-aactcgattttaatgttggaaacaaaaaattgtattgtctcgaaaaaaaccgcaccaactgatccaacccaaacca 1331079  T
Q  129 catt 132  Q
    ||||    
T  1331078 catt 1331075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 6946449 - 6946523
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    ||||||||| |||||| |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  6946449 aacattgttggaaataagttgtgttttacctttttaacttgattttaatgttggaaacaaaaaattgtattgtct 6946523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 21734502 - 21734607
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct--agtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    ||||||||||||||||||| ||||| ||  |||||||||||  ||| |||||||||||||||||  || ||||||||||| |||||||||||||||||||    
T  21734502 aaatatgttgtgttttagtgttttatctcaattttaatgttgaaaataaaaaattgtattgtctcgagaaaaaaaccgcatcaaccgatccaacctaaac 21734601  T
Q  127 cacatt 132  Q
    | ||||    
T  21734602 ctcatt 21734607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 13194082 - 13193899
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||||  ||| ||||| |||||||   |||||||||  |||||||||||  ||||||||||||||||| ||| | ||||||||| | ||||||||||    
T  13194082 aacattgtcggaactatgtggtgttttgcctttttaactcaattttaatgttgaaaacaaaaaattgtattatcttg-aaaaaaccgtaccaaccgatcc 13193984  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatctt 207  Q
    |||| ||||  ||||     | |||||||| |||||||||| |||| ||||||||||||||| ||||||| |  ||| ||||||||||||    
T  13193983 aacccaaactgcatt-----ggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaacagtatgcttttttatctt 13193899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 250
Target Start/End: Original strand, 27301394 - 27301609
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||| ||||||||||  ||||||||| ||||||||| || ||||||||||||||||||||||   ||||||||||| ||| |||||  ||| |||||     
T  27301394 aaatattttgtgttttacctttttaactcgattttaattttggaaacaaaaaattgtattgtct-caaaaaaaccgcaccaaacgatctgacccaaaccg 27301492  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaat 228  Q
    ||||     | |||| ||| ||||  |||| |||| ||||||||||||||  ||||||| ||  || |||||||||||||  ||  ||||| || |||||    
T  27301493 catt-----ggtttggtttggttcaaattttattttaaaagtcaaccgaatcaaaccaaaccgcatgcttttttatcttgcggtccggatggcttttaat 27301587  T
Q  229 ttcaaaatcgaaccacactgca 250  Q
     |||||| ||||||| ||||||    
T  27301588 ctcaaaaccgaaccaaactgca 27301609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 31719988 - 31720083
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaa 125  Q
    ||||||||| |||||||  ||||||||| |||||||||||| |||||||||||||||||||| | | | ||||||||| ||||||||||||| ||||    
T  31719988 aaatatgttttgttttacctttttaactcgattttaatgttggaaacaaaaaattgtattgt-ttgaagaaaaccgcaccaaccgatccaacttaaa 31720083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 44085656 - 44085546
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||  | |||||||||||||||||||||| |||| |||||||||| |||||| | ||| ||||||| |||||||||||||| |||||     
T  44085656 aaatatgttgtgtttcggctttttaacttgattttaatgttggaaa-aaaaaattgtgttgtctcg-aaataaccgcaccaaccgatccaacccaaaccg 44085559  T
Q  129 catttgttcgatt 141  Q
    |||| ||| ||||    
T  44085558 cattggtttgatt 44085546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 12041494 - 12041596
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| | |||||||||||| |||||  ||||||||| ||||||||||||  ||| ||||||||||| ||| | | ||||||||||| ||||||||||    
T  12041494 aacattgctggaaatatgttgtattttacctttttaactcgattttaatgttgtaaataaaaaattgtactgtttcg-aaaaaaccgcaccaaccgatcc 12041592  T
Q  118 aacc 121  Q
    ||||    
T  12041593 aacc 12041596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 262
Target Start/End: Complemental strand, 41461246 - 41461027
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||| ||||||| ||||||||||||||      |||||||  |||||||||  ||||||||||| |||||||| ||| | |||||     
T  41461246 aaatatgttgtgttttagctttttaatttgattttaatgtt-----aaaaaaat--tattgtcta--aaaaaaccgcaccaaccgattcaatccaaaccg 41461156  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaat 228  Q
    ||||     | |||| ||| ||||| |||| |||| ||||||||||||||| ||||||| ||  || |||||||| ||||  ||| || ||||| ||| |    
T  41461155 catt-----ggtttggtttggttcgaattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttttttagcttgcggttcggttgacttttagt 41461061  T
Q  229 ttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
     | |||| ||||||| |||||||||  |||||||    
T  41461060 ctaaaaaccgaaccaaactgcaccgcgaacaccc 41461027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 11377562 - 11377627
Alignment:
Q  29 aaatatgttgtgttttagtttttt--aacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    |||| |||||||||||||||||||  ||||||| ||||||||| |||||||||||||||| |||||    
T  11377562 aaatttgttgtgttttagtttttttaaacttgaatttaatgttggaaacaaaaaattgtactgtct 11377627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 22014139 - 22014078
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgt 90  Q
    ||||||| |||||||||| ||||||||| |||||||||||| ||||| ||||||| ||||||    
T  22014139 aaatatgctgtgttttagctttttaactcgattttaatgttggaaacgaaaaattatattgt 22014078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 5862602 - 5862710
Alignment:
Q  96 aaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatatt 195  Q
    |||||||||||  ||||||| ||| | |||||  ||| ||| |||||| ||| |||||||||| |||| ||||||||||||||| ||||||| ||  ||     
T  5862602 aaaaaaccgcacaaaccgattcaatccaaaccgtattggtttgatttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcata 5862701  T
Q  196 cttttttat 204  Q
    |||||||||    
T  5862702 cttttttat 5862710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 15320516 - 15320596
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    ||||||||||||||||||||||    | ||||||||||||||||| | ||||||||||| ||||| ||||||   ||||||||||    
T  15320516 tttttaacttgattttaatgtt----aaaaaaaattgtattgtctcgaaaaaaaccgcatcaaccaatccaaaacaaaccacatt 15320596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 11051330 - 11051414
Alignment:
Q  41 ttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    ||||| |||||||||||||||||||||||  ||| |||||||||||||||||   || |||||||  ||| ||||||||||||||||    
T  11051330 ttttatttttttaacttgattttaatgtt-taaaaaaaaaattgtattgtctcaaaacaaaccgctccaa-cgatccaacctaaacc 11051414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 26316327 - 26316215
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||| ||||||||| ||||| |||||  ||| |||| ||||||| || ||  ||||||||||||||||| | |  | |||||||||||||||||||||    
T  26316327 aacatttttagaaataagttgt-ttttaactttgtaacatgattttgattttgaaaacaaaaaattgtattttgtcat-aaaaaccgcaacaaccgatcc 26316230  T
Q  118 aacctaaaccacatt 132  Q
    || ||||||| ||||    
T  26316229 aatctaaaccgcatt 26316215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 10242660 - 10242755
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    ||||||||||||| ||||| |||||||||||||||||  ||| ||   ||||||||||||||||| |  ||||||  || |||| |||||||||||||||    
T  10242660 gaaatatgttgtgctttagctttttaacttgattttagcgtt-ga---aaaaaattgtattgtctcgagaaaaacaacaccaactgatccaacctaaacc 10242755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 36500535 - 36500644
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  |||||| ||| ||||||| ||||||||| |||||||||||| |||  ||| |||| || ||||    ||||||| ||| ||||||||||    
T  36500535 aacattgttgaaaatatattgcgttttaggtttttaactcgattttaatgttggaataaaataattctagtgtcccaaaaaaaactgcaccaaccgatcc 36500634  T
Q  118 aacctaaacc 127  Q
    |||| |||||    
T  36500635 aacccaaacc 36500644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 4657904 - 4657841
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||| || |||||| ||||||||||||    
T  4657904 gaaataagttgt-ttttatttttttaacttgattttaacgttggatacaaaatattgtattgtct 4657841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 11678166 - 11678114
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||||| | |||||| ||||||| |||||||||||||| |||||||||||    
T  11678166 aaatatgttcttttttagctttttaatttgattttaatgttggaaacaaaaaa 11678114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 11695644 - 11695592
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||||| | |||||| ||||||| |||||||||||||| |||||||||||    
T  11695644 aaatatgttcttttttagctttttaatttgattttaatgttggaaacaaaaaa 11695592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 24725699 - 24725750
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgtt 69  Q
    ||||||| | |||||||||||| |||||  ||||||||||||||||||||||    
T  24725699 aacattgctggaaatatgttgtcttttaactttttaacttgattttaatgtt 24725750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 30761651 - 30761714
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||||| |||||||||| |||| ||  ||||||||| |||||||||||| |||| ||||||    
T  30761651 aacattgttggaaatatgttatgttataactttttaactcgattttaatgttggaaataaaaaa 30761714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 43452305 - 43452239
Alignment:
Q  53 aacttgattttaatgttcgaaacaaaaaattgtattgtctag-taaaaaaccgcaacaaccgatccaa 119  Q
    ||||||||||||||||| |||| ||||||||||||||||| |  ||||||| ||| ||||||||||||    
T  43452305 aacttgattttaatgtt-gaaaaaaaaaattgtattgtctcgaaaaaaaactgcaccaaccgatccaa 43452239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 20985821 - 20985855
Alignment:
Q  47 ttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||||||||||||||||||| |||||||||||    
T  20985821 ttttttaacttgattttaatgtttgaaacaaaaaa 20985855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 11651024 - 11650869
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  |||||| || | || ||| ||||||||| |||||||||||| | | ||||||  | |||||||| | |||| | |||| ||||||||||    
T  11651024 aacattgttgaaaatatatttttttatagctttttaactcgattttaatgttggtagcaaaaatatctattgtctcg-aaaatatcgcaccaaccgatcc 11650926  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaac 174  Q
    || | |||||||||| |||   |||| ||| ||||| |||| |||| |||| |||||    
T  11650925 aatccaaaccacattggtttagtttggttttgttcgaattttattttaaaattcaac 11650869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 12884690 - 12884593
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  ||||| | ||||||||||||||   ||||||||    |||||||||  |||||||||||  ||||||||||| | ||||||    
T  12884690 aaatatgttgtgttttacgtttttcatttgattttaatgttgtcaacaaaaaccaatattgtcta--aaaaaaccgcactaaccgatccaatcaaaacca 12884593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 262
Target Start/End: Original strand, 23120161 - 23120394
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  |||||||| ||||||||||||| ||||||||||| | ||| |||||| ||||||| |||  |||| |||||||| ||||||    
T  23120161 aaatatgttgtgttttaactttttaacctgattttaatgttggaaacaaaaaaatttatcgtctagaaaaaaactgcatgaacctatccaacccaaacca 23120260  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaat 228  Q
    |||| ||| | |||| ||| ||| |||| |  |||  |||||||| ||||| ||||||| ||  || |||||||||||||  ||| |||||||| |||      
T  23120261 cattagtttggtttggtttggtttggatgttttttttaaagtcaatcgaaccaaaccaaaccgcatgcttttttatcttgcggttcggatgacttttacc 23120360  T
Q  229 ttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
    |||||||||||| || || ||||||  |||||||    
T  23120361 ttcaaaatcgaatcaaaccgcaccgcgaacaccc 23120394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 48293309 - 48293542
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| | ||||||| | |||||||| |||||||||| |||||||||||| |||||||||||||||||||||| | |||||||| || ||||||||||    
T  48293309 aacattgctggaaatatttcgtgttttacttttttaactcgattttaatgttggaaacaaaaaattgtattgtctcg-aaaaaacctcaccaaccgatcc 48293407  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttgga 217  Q
    |||| ||||| ||          ||| ||| |||||||||| |||| ||||| ||||||||| ||||||| ||  || |||||||| ||||  ||| |||    
T  48293408 aacccaaaccgca----------ttggtttggttcggattttattttaaaagacaaccgaaccaaaccaaaccgcatgcttttttaccttgcggttcgga 48293497  T
Q  218 tgactcttaatttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
    ||||| ||||  |||||| ||||||| |||||||||  |||||||    
T  48293498 tgacttttaacctcaaaaccgaaccaaactgcaccgcgaacaccc 48293542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 35 - 262
Target Start/End: Original strand, 32223231 - 32223456
Alignment:
Q  35 gttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttg 134  Q
    |||||||||||  ||||||||| |||||||||||| ||||||||||||||||||||||   ||||||||||| ||||||||| |||| ||||| ||||||    
T  32223231 gttgtgttttacctttttaactagattttaatgttggaaacaaaaaattgtattgtct--caaaaaaccgcatcaaccgatctaacccaaaccgcatttg 32223328  T
Q  135 ttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaa 234  Q
    || | |||| ||| |||| ||||   ||| |||||| ||| |||| || |||| ||  || ||||||||||||    ||||||||||| ||||  |||||    
T  32223329 tttggtttggtttggttcagattgtgttttaaaagtaaacggaacaaatccaaaccgcatgcttttttatctttcgatttggatgacttttaacctcaaa 32223428  T
Q  235 atcgaaccacactgcaccggaaacaccc 262  Q
    | |||| || || ||||||  |||||||    
T  32223429 accgaatcaaaccgcaccgcgaacaccc 32223456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 15724060 - 15723905
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  | |||||| ||||||||||||| ||||||||||| | ||| |||| | ||||||||||| |||||||||||||| |||||     
T  15724060 aaatatgttgtgttttacctctttaacctgattttaatgttggaaacaaaaaaatttatcgtcttgaaaaaaaccgcatcaaccgatccaacccaaaccg 15723961  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaac 184  Q
    |||| ||| | |||| ||| ||| |||| | ||||  |||||||||||||| ||||    
T  15723960 cattagtttggtttggtttggtttggatgttatttttaaagtcaaccgaaccaaac 15723905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 29 - 262
Target Start/End: Original strand, 5122292 - 5122521
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaa-ccgcaacaaccgatccaacctaaacc 127  Q
    ||||| ||||||||| |  |||||||||||||||||||||| |||||||||||||||||||||| | |||||| || ||  || |||||||||| | |||    
T  5122292 aaataggttgtgtttcaactttttaacttgattttaatgttagaaacaaaaaattgtattgtctcgaaaaaaagccacacaaatcgatccaacccagacc 5122391  T
Q  128 acatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaa 227  Q
    |||||     | |||| ||| |||||||||| ||||  |||||||||||||| ||| ||| ||  || |||||||||||||  ||||  |||||| |||     
T  5122392 acatt-----ggtttggtttggttcggattttatttttaaagtcaaccgaaccaaatcaaaccgcatgcttttttatcttgtggtttatatgacttttac 5122486  T
Q  228 tttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
      |||||| ||||||| || |||||| ||||||||    
T  5122487 cctcaaaaccgaaccaaaccgcaccgcaaacaccc 5122521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 8312061 - 8311956
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctag---taaaaaaccgcaacaaccgatccaacctaaa 125  Q
    |||| ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| || ||    ||||||||||| ||||||||||||||||||    
T  8312061 aaatttgttgtgttttagctttttaacttgattttaatgttgtaaacaaaaaattgtattttcgagagagaaaaaaccgcaccaaccgatccaacctaaa 8311962  T
Q  126 ccacat 131  Q
    | ||||    
T  8311961 ctacat 8311956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 264
Target Start/End: Original strand, 18536548 - 18536783
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||| |||||||||||  ||||||||| || ||||| ||| ||||||||| ||||||||||||   ||||||||||| |||| ||||||||  ||||      
T  18536548 aaataagttgtgttttacctttttaactcgactttaaggttggaaacaaaatattgtattgtctcaaaaaaaaccgcaccaactgatccaactcaaactg 18536647  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaat 228  Q
    |||||||| | |||  ||| |||||||||   ||| ||||||||||||||| || |||| |  | | |||||||||||||  |||||||||| | |||      
T  18536648 catttgtttggttttgtttggttcggattgtgttttaaaagtcaaccgaaccaacccaaactgtgtgcttttttatcttgtggtttggatgaattttagc 18536747  T
Q  229 ttcaaaatcgaaccacactgcaccggaaacacccta 264  Q
    ||||||| ||||| | ||||||| |  |||||||||    
T  18536748 ttcaaaaccgaacaaaactgcactgcgaacacccta 18536783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 48338515 - 48338361
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaa-ccgatccaacctaaac 126  Q
    ||||||||||||||||||  ||||||||| ||||||||||||  ||||||||||||||||||||| | |||||||| || ||| |||||||||   ||||    
T  48338515 gaaatatgttgtgttttacctttttaactcgattttaatgttgaaaacaaaaaattgtattgtctcg-aaaaaaccacaccaacccgatccaattcaaac 48338417  T
Q  127 cacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    | ||||     |||||| ||| ||| |||||| |||| ||||||||||||||| |||||||    
T  48338416 cgcatt-----gatttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaa 48338361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 9058310 - 9058235
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaaccta 123  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||| |||||||| |||||||||||| ||||||||    
T  9058310 tttttaacttggttttaatgttagaaacaaaaaattgtattctctcgtaaaaaatcgcaacaaccgaaccaaccta 9058235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 6102056 - 6101981
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccg 104  Q
    |||||||||||||||||   |||||||||||||||| |||| |||||||||||||||||||||| | |||||||||    
T  6102056 aaatatgttgtgttttatccttttaacttgattttactgttggaaacaaaaaattgtattgtctcgaaaaaaaccg 6101981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 46471599 - 46471521
Alignment:
Q  37 tgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatc 116  Q
    ||||||||| |||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||||  ||||||||    
T  46471599 tgtgttttacttttttaacttgattttaatgtttaaaacaaaaaattatattgtctag-aaaaaaccgcattaaccgatc 46471521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 51907251 - 51907114
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| | ||| ||||||||||||||  ||||||||||||||||||||||  |||||||||||| |||||||||  |||||| |||| ||||| |  |    
T  51907251 aacattggtggaagtatgttgtgttttacctttttaacttgattttaatgttgaaaacaaaaaattatattgtcta-aaaaaaatcgcatcaaccaaaac 51907153  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggat 156  Q
    || | ||||||| |||||| | |||| ||| ||||||||    
T  51907152 aatccaaaccacgtttgtttggtttggtttggttcggat 51907114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 186
Target Start/End: Original strand, 11031546 - 11031701
Alignment:
Q  34 tgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct---agtaaaaaaccgcaacaaccgatccaacctaaaccaca 130  Q
    |||||| || ||| ||||| ||| ||||||||||||  |||||||||||||||||||||   |  ||||| ||||| |||||||||||||| ||||||||    
T  11031546 tgttgtattatagctttttgactcgattttaatgttgaaaacaaaaaattgtattgtcttaaaaaaaaaagccgcaccaaccgatccaacccaaaccaca 11031645  T
Q  131 tttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaacca 186  Q
    ||  || ||||||  || |||  ||||| |||| ||||||||||| ||| ||||||    
T  11031646 ttgatttgatttgggttggttaagattttattttaaaagtcaaccaaaccaaacca 11031701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 18399217 - 18399103
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgatttt-aatgttcgaaacaaaaaattgtattgtc-tagtaaaaaaccgcaacaaccgat 115  Q
    ||||||||| || |||||||||||| ||  ||||||| |||||||| ||||||  |||||||||||||||||||| |||  |||||||||| ||||||||    
T  18399217 aacattgttggatatatgttgtgttctacctttttaatttgatttttaatgttaaaaacaaaaaattgtattgtcttag--aaaaaccgcaccaaccgat 18399120  T
Q  116 ccaacctaaaccacatt 132  Q
    |||||| ||||| ||||    
T  18399119 ccaacccaaaccgcatt 18399103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 29700894 - 29700833
Alignment:
Q  31 atatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa-ttgtattgtc 91  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||    
T  29700894 atatgttgtgttttaggtttttaacttgattttaatgttggaaacaaaaaagttgtattgtc 29700833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 53934817 - 53934698
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattg--tattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| || ||||||||     |||||||| | ||||||||||||||| |||| ||| | ||||    
T  53934817 aaatatgttgtattttaatttttcaacttgattttaatgttggatacaaaaaaaaaattattgtctcg-aaaaaaccgcaacaatcgattcaatccaaac 53934719  T
Q  127 cacatttgttcgatttgattt 147  Q
    |||||||||| ||||||||||    
T  53934718 cacatttgtttgatttgattt 53934698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 29232928 - 29232773
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  ||||||||||| |||||| | ||||| |||||||||||||| ||||||||||| | |||||||   ||||||| |||| ||||||||||    
T  29232928 aacattgttgaaaatatgttgttttttagctgtttaatttgattttaatgttggaaacaaaaaaat-tattgtc---taaaaaatcgcaccaaccgatcc 29232833  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    || | |||          |||  ||| |||||||||||||| |||| |||||||||||||||||||||||    
T  29232832 aatccaaa----------tcgcattggtttagttcggattttattttaaaagtcaaccgaactaaaccaa 29232773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 49641014 - 49640950
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtcta 93  Q
    |||||||||||||||||  | |||||||||||||||||||| |||| ||||||||||||||||||    
T  49641014 aaatatgttgtgttttaactctttaacttgattttaatgttggaaaaaaaaaattgtattgtcta 49640950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 18396500 - 18396349
Alignment:
Q  31 atatgttgtgttttagttttttaacttgatttt-aatgttcgaaacaaaaaattgtattgtctagta-aaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||| ||  |||||||||||||||| ||||||  |||| ||||||||||||||||  || |||||| ||| |||||||||||||| ||||||    
T  18396500 atatgttgtgttctaactttttaacttgatttttaatgttaaaaactaaaaattgtattgtct--tagaaaaactgcaccaaccgatccaacccaaacca 18396403  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    ||||     | |||| ||| |||||||||| || | |||||||||| |||| |||||||    
T  18396402 catt-----ggtttggttttgttcggattttatcttaaaagtcaactgaaccaaaccaa 18396349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 48602434 - 48602536
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||||||| |||||||  |||||||||| |||||||||||  |||||| |||||||||||| | | | ||||||||| |||||||||||||| |||||     
T  48602434 aaatatgttttgttttaactttttaacttaattttaatgttgaaaacaacaaattgtattgtttcg-ataaaaccgcaccaaccgatccaacccaaaccg 48602532  T
Q  129 catt 132  Q
    ||||    
T  48602533 catt 48602536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 21069235 - 21069078
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaat-tgtattgtctagtaaaaaaccgcaacaaccgatc 116  Q
    |||||||||  |||||||| ||||||||| ||||||| ||||||||||||||  |||||||||||   |||| | ||  ||||||||||| ||||| |||    
T  21069235 aacattgttgaaaatatgtagtgttttagctttttaatttgattttaatgttgaaaacaaaaaataaatattctata-aaaaaaaccgcaccaaccaatc 21069137  T
Q  117 caacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaacc 175  Q
    ||| | ||||| |||| ||| || ||| ||| ||||| |||| |||| |||||||||||    
T  21069136 caatccaaaccgcattggtttgagttggtttggttcgaatttaattttaaaagtcaacc 21069078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 253
Target Start/End: Original strand, 36106372 - 36106548
Alignment:
Q  72 aaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtc 171  Q
    ||||||||||||||||||||| | ||||||||||| |||| ||||||||  ||||| ||||     | |||| ||| |||||||||| |||| |||||||    
T  36106372 aaacaaaaaattgtattgtctcg-aaaaaaccgcaccaactgatccaactcaaaccgcatt-----ggtttggtttggttcggattttattttaaaagtc 36106465  T
Q  172 aaccgaactaaacc-aatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccg 253  Q
    |||||||| ||||| || ||  ||  ||||||||||||  ||| |||||||| ||||  |||||| ||||||| || ||||||    
T  36106466 aaccgaaccaaaccaaaaccgcatgtttttttatcttgcggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccg 36106548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 18319477 - 18319578
Alignment:
Q  31 atatgttgtgttttagttttttaacttgatttt-aatgttcgaaacaaaaaattgtattgtc-tagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||| ||  ||||||| |||||||| ||||||  |||||||||||||||||||| |||  |||||||||| |||||||||||||| |||||     
T  18319477 atatgttgtgttctacctttttaatttgatttttaatgttaaaaacaaaaaattgtattgtcttag--aaaaaccgcaccaaccgatccaacccaaaccg 18319574  T
Q  129 catt 132  Q
    ||||    
T  18319575 catt 18319578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 45983552 - 45983449
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  |||||||| ||||||||||||| |||||||||||   |||  | | | ||||| ||||| |||||||||||||| |||||     
T  45983552 aaatatgttgtgttttaactttttaacctgattttaatgttggaaacaaaaaaaattatcatttcgaaaaaacccgcatcaaccgatccaacccaaaccg 45983453  T
Q  129 catt 132  Q
    ||||    
T  45983452 catt 45983449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 48684945 - 48684892
Alignment:
Q  36 ttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattg 89  Q
    ||||||||||| ||||||| |||||||||||||| |||| ||||||||||||||    
T  48684945 ttgtgttttagctttttaatttgattttaatgttggaaataaaaaattgtattg 48684892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 4688860 - 4688747
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaac-aaaaaattgtattgtctagtaaaaaaccgcaacaaccgatc 116  Q
    |||||||||  |||||||||||||||||  |||||||||||| |||||||||  |||| |||||||| |||||| ||  ||||||| |||  |||||| |    
T  4688860 aacattgttgcaaatatgttgtgttttacctttttaacttgagtttaatgttgaaaacaaaaaaattatattgttta--aaaaaacggcactaaccgaac 4688763  T
Q  117 caacctaaaccacatt 132  Q
    ||| | ||||||||||    
T  4688762 caatcaaaaccacatt 4688747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 26674280 - 26674224
Alignment:
Q  36 ttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    ||||||||||  ||||||||| |||||||| ||| ||||||||||||||||||||||    
T  26674280 ttgtgttttacctttttaactcgattttaaagttggaaacaaaaaattgtattgtct 26674224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 262
Target Start/End: Complemental strand, 20986533 - 20986367
Alignment:
Q  96 aaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatatt 195  Q
    |||||||||||  ||||||| ||| | ||||| |||| ||| | |||| ||| ||||  |||| |||| | ||||||||||||| ||||||| ||  ||     
T  20986533 aaaaaaccgcacaaaccgattcaatccaaaccgcattggtttggtttggtttggttcatattttattttataagtcaaccgaaccaaaccaaaccgcata 20986434  T
Q  196 cttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
    ||| |||||||||  |||||||||||| |||  ||||||| |||| || || ||| || ||||||||    
T  20986433 cttgtttatcttgcggtttggatgacttttagcttcaaaaccgaaacaaaccgcatcgcaaacaccc 20986367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 3349843 - 3349916
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacc 121  Q
    ||||||||||||||| |||||| || ||||||||| ||||||||| | ||||||   |||||||||| ||||||    
T  3349843 tttttaacttgatttcaatgttggacacaaaaaatagtattgtctcgcaaaaaatttcaacaaccgaaccaacc 3349916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 12916517 - 12916424
Alignment:
Q  33 atgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||||| ||||  |||||||||| |||||||| ||  ||||||||||||||| ||||| |  ||||||  || || ||||||||||||||||    
T  12916517 atgttgtgctttaactttttaacttaattttaatattgaaaacaaaaaattgtactgtctcgagaaaaactacatcagccgatccaacctaaac 12916424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 42198956 - 42198904
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    |||||||||||||||||  |||||||| |||||||||||||  ||||||||||    
T  42198956 aaatatgttgtgttttaactttttaacatgattttaatgttgaaaacaaaaaa 42198904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 3666987 - 3667058
Alignment:
Q  21 attgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    |||||| |||||||||||| |||||  |||||| |||||||||||  ||  |||||||||||| ||||||||    
T  3666987 attgttggaaatatgttgtattttacctttttatcttgattttaacattgaaaacaaaaaattatattgtct 3667058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 14866949 - 14866858
Alignment:
Q  40 gttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacat 131  Q
    ||||||| |||||||||||||||| || ||  ||||||||||||| | ||||| |  || |||||||  ||||||||||||| |||| ||||    
T  14866949 gttttagctttttaacttgattttgatattgtaaacaaaaaattgaagtgtctcgataacaaccgcacaaaccgatccaacccaaacaacat 14866858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 17794308 - 17794265
Alignment:
Q  48 tttttaacttgattttaatgttcgaaa-caaaaaattgtattgt 90  Q
    |||||||||||||||||||||| |||| ||||||||||||||||    
T  17794308 tttttaacttgattttaatgttggaaaccaaaaaattgtattgt 17794265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 10778403 - 10778473
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaa 119  Q
    ||||||||||| |||||||||  |||||||||  |||||||||| | |||||||  |||||||||| ||||    
T  10778403 ttttaacttgactttaatgttgaaaacaaaaatatgtattgtcttgcaaaaaactacaacaaccgaaccaa 10778473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 35233207 - 35233256
Alignment:
Q  37 tgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgta 86  Q
    |||||||||  |||||||| |||||||||||||  |||||||||||||||    
T  35233207 tgtgttttaactttttaacctgattttaatgttgaaaacaaaaaattgta 35233256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 40494591 - 40494493
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||| | |||| ||||||| ||||||||| ||||   |||||||||| || | | ||||||| ||| |||||||||||||  ||||||    
T  40494591 aaatatgttgtgtttttgctttt-aacttgactttaatgttggaaa---aaaattgtatggtatcg-aaaaaactgcaccaaccgatccaacacaaacca 40494497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 262
Target Start/End: Original strand, 32942013 - 32942216
Alignment:
Q  60 ttttaatgttcgaaacaaaaaattgtattgtctagtaaaa-aaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttcggattt 158  Q
    |||||||||| |||||||||||||||||||||| | |||| ||||||| ||| |||||||||  |||||||||| ||| | |||| ||| |||||||||     
T  32942013 ttttaatgttggaaacaaaaaattgtattgtctcgaaaaaaaaccgcaccaatcgatccaactcaaaccacattggtttggtttggtttggttcggattg 32942112  T
Q  159 gatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccggaaac 258  Q
     |||| ||||||||||||||  ||||||| ||  ||  ||||||||||||  ||| |||||||| ||||  |||||| ||||||| |||||||||  |||    
T  32942113 tattttaaaagtcaaccgaatcaaaccaaaccgcatgtttttttatcttgcagttcggatgacttttaacctcaaaaccgaaccaaactgcaccgcgaac 32942212  T
Q  259 accc 262  Q
    ||||    
T  32942213 accc 32942216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 40849040 - 40848871
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaac-aaaaaattgtattgtctagtaaaaaaccgcaacaaccgatc 116  Q
    ||||||| | ||||||||||||||||||  ||||||||| ||||||||||||  |||| ||||||||||||||||    ||||||||||| ||||||||     
T  40849040 aacattgctggaaatatgttgtgttttatctttttaactcgattttaatgttgaaaacaaaaaaattgtattgtc-ccaaaaaaaccgcaccaaccgatt 40848942  T
Q  117 caacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    ||||| ||||| |||| ||| | ||| |||| |||||||||| |||| ||||||||||||||| |||||||    
T  40848941 caacccaaaccgcattagtttggttttatttggttcggattttattttaaaagtcaaccgaaccaaaccaa 40848871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 26524839 - 26524967
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||| ||||||| ||||||| || ||| |||||| ||||||||||    
T  26524839 aacattgctagaaatatgttgtgttttagctttttaactttattttaatgttggaaacagaaaattgcattgtctggtgaaacaccgcaccaaccgatcc 26524938  T
Q  118 aacctaaaccacatttgttcgatttgatt 146  Q
    ||||  |||| |||| ||| | |||||||    
T  26524939 aaccctaaccgcattggttaggtttgatt 26524967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 30079498 - 30079609
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||||||| |||||  ||||||||||| |||||||||||||| |||||     
T  30079498 aaatatattgtgttttagctttttaagttgattttaatgttggaaacaaaaaattgtatcgtcta--aaaaaaccgcaccaaccgatccaacccaaaccg 30079595  T
Q  129 catttgttcgattt 142  Q
    |||| ||| |||||    
T  30079596 cattggtttgattt 30079609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 29 - 253
Target Start/End: Original strand, 8568458 - 8568682
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaa--aaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||| ||||||||||||| | ||||| ||||| |||| |||  ||||||  ||||   |||||||||  ||||||||||| |||||||||||| | ||||    
T  8568458 aaatttgttgtgttttagctatttaatttgatattaaagttgaaaacaataaaaaaaatattgtcta--aaaaaaccgcaccaaccgatccaatccaaac 8568555  T
Q  127 cacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactctta 226  Q
    | |||| ||| ||||| ||||||||||||||| |||| |||||||||||||||  |||||| ||  || ||| |||||||||  ||| |||||||| |||    
T  8568556 cgcattagtttgatttcatttagttcggattttattttaaaagtcaaccgaaccgaaccaaaccgcatacttatttatcttgcggttcggatgactttta 8568655  T
Q  227 atttcaaaatcgaaccacactgcaccg 253  Q
    |  |||||| ||||||| || ||||||    
T  8568656 acctcaaaaccgaaccaaaccgcaccg 8568682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 6879999 - 6880154
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  |||||||||||||||||  |||||||||||||||||| |||  ||||||||||||||||||||| |  ||||| |||   |||||||||    
T  6879999 aacattgttgaaaatatgttgtgttttaactttttaacttgattttaaggttgaaaacaaaaaattgtattgtctcgacaaaaatcgcttaaaccgatcc 6880098  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaa 173  Q
    |||| ||||| ||||||||   |||| ||| ||| |||||| |||| |||||||||    
T  6880099 aacccaaaccgcatttgttttgtttggtttggtttggattttattttaaaagtcaa 6880154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 26215005 - 26215119
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| | ||||||||||||||||||  ||||||| |||||||||||||| ||||||||||||| |||||  | |||||||||| || |||| |||||    
T  26215005 aacattgatggaaatatgttgtgttttacctttttaatttgattttaatgttggaaacaaaaaattatattgaatggtaaaaaaccacaccaactgatcc 26215104  T
Q  118 aacctaaaccacatt 132  Q
    |||| ||||||||||    
T  26215105 aacccaaaccacatt 26215119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 37375507 - 37375394
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  ||||||||||||||| |  |||||||||||||||||||||| ||||||||||||||||| || | | ||||||||||| |||||||| |    
T  37375507 aacattgttgaaaatatgttgtgtttaaaatttttaacttgattttaatgttggaaacaaaaaattgtatcgtatcg-aaaaaaccgcaccaaccgattc 37375409  T
Q  118 aacctaaaccacatt 132  Q
    |||| ||||| ||||    
T  37375408 aacccaaaccgcatt 37375394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 29211543 - 29211711
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| | ||||||| |||||||||| ||||||||||  |||||||||||  ||||||||||||||||||| | | ||||||||||| ||||||||||    
T  29211543 aacattgctcgaaatatattgtgttttacttttttaactatattttaatgttgcaaacaaaaaattgtattgtttcg-aaaaaaccgcaccaaccgatcc 29211641  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    |||  || |  |||| ||| | |||| ||| |||||||||  |||| |||| || ||||||| |||||||    
T  29211642 aactcaacctgcattggtttggtttggtttggttcggattgtatttcaaaaatcgaccgaacgaaaccaa 29211711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 43202604 - 43202532
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaa 101  Q
    ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| | ||||||    
T  43202604 aaatatgttgtgttttacttttttaacttaattttaatgttggaaacaaaaaattgtattgtctcgaaaaaaa 43202532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 29628265 - 29628164
Alignment:
Q  39 tgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcg 138  Q
    |||||||  ||||||||| | |||||||||| |||||||||||||||||||||| | |||||| |||| |||||||||||||| |||||||||| ||| |    
T  29628265 tgttttacctttttaactcggttttaatgttggaaacaaaaaattgtattgtctcg-aaaaaatcgcaccaaccgatccaacccaaaccacattggtttg 29628167  T
Q  139 att 141  Q
    |||    
T  29628166 att 29628164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 46147361 - 46147220
Alignment:
Q  57 tgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttcggat 156  Q
    ||||||||||| | |||||||||||||||||||||| | |||||| |||| ||||||||||||| |||||| ||||     | |||| ||| |||| |||    
T  46147361 tgattttaatgatggaaacaaaaaattgtattgtctcgaaaaaaatcgcaccaaccgatccaacgtaaaccgcatt-----ggtttggtttggttcagat 46147267  T
Q  157 ttgatttaaaaagtcaaccgaactaaaccaatccatattctttttta 203  Q
    || |||| ||||||||||| ||| ||||||||||  || ||||||||    
T  46147266 tttattttaaaagtcaaccaaaccaaaccaatccgcatgctttttta 46147220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 8118195 - 8118297
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||||||||||||| || ||||||||||||||||||||||  |||||||||||| ||| |||| | || ||||||||  ||||||||||||| |||| |    
T  8118195 aaatatgttgtgtttcagctttttaacttgattttaatgttgaaaacaaaaaattatatcgtctcg-aacaaaccgcactaaccgatccaacccaaacaa 8118293  T
Q  129 catt 132  Q
    ||||    
T  8118294 catt 8118297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 207
Target Start/End: Complemental strand, 23032853 - 23032674
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaat-tgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    ||||||||||||||||||  |||||||||  ||||| |||||  ||||||||||  |||||||||| | ||||| | | | |||||||||||| | ||||    
T  23032853 gaaatatgttgtgttttacctttttaactgaattttcatgttgaaaacaaaaaaaatgtattgtctcgcaaaaa-cagtatcaaccgatccaatccaaac 23032755  T
Q  127 cacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatctt 207  Q
    | |||| ||| | |||| ||| ||||  |||| |||| ||||||||||||||| |||| || ||| || ||||||||||||    
T  23032754 ctcattggtttggtttggtttggttcaaattttattttaaaagtcaaccgaaccaaactaaaccacatacttttttatctt 23032674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 27215101 - 27215197
Alignment:
Q  26 tagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagt-aaaaaaccgcaacaaccgatccaacc 121  Q
    ||||| ||||||||||||||  |||||||||  ||||||||||| |||||||||||||||||||| | || ||||||||| | |||| |||||||||    
T  27215101 tagaagtatgttgtgttttaactttttaactcaattttaatgttggaaacaaaaaattgtattgtttggtaaaaaaaccgtaccaacggatccaacc 27215197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 11399296 - 11399190
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||  ||||||||| |||| |||| ||  ||| |||||||||| ||||||   ||||||||||| |||||||||||||| |||||     
T  11399296 aaatatgttgtgttttacctttttaactcgattataattttgaaaataaaaaattgtgttgtctca-aaaaaaccgcaccaaccgatccaacccaaaccg 11399198  T
Q  129 catttgtt 136  Q
    ||||||||    
T  11399197 catttgtt 11399190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 10338710 - 10338908
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattg-tattgtctagtaaaaaaccgcaacaaccgatc 116  Q
    ||||||||| ||||||||||||||| ||| ||||||| |||||||||| |||  ||||||||||    |||||||||  ||||||||||| |||||||||    
T  10338710 aacattgttggaaatatgttgtgttatagctttttaaattgattttaacgttgaaaacaaaaaaaaaatattgtcta--aaaaaaccgcatcaaccgatc 10338807  T
Q  117 caacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttgg 216  Q
    ||| | |||||  |||     |||||| ||| |||| ||||| |||| ||||||||| ||||| |||  || ||| || ||| ||||| |||  ||||||    
T  10338808 caatccaaaccgaatt-----gatttggtttggttcagattttattttaaaagtcaatcgaaccaaataaaaccaaatacttatttattttgcagtttgg 10338902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 2308007 - 2308119
Alignment:
Q  21 attgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaac-aaccgatccaa 119  Q
    |||| ||||||||||||||||| ||  ||||||| | ||||||||||||  ||||||||||||||||||| | | |||||| |  ||| |||||||||||    
T  2308007 attgctagaaatatgttgtgttataactttttaattcgattttaatgttgcaaacaaaaaattgtattgttttgaaaaaaaactgaactaaccgatccaa 2308106  T
Q  120 cctaaaccacatt 132  Q
    |  ||||||||||    
T  2308107 ctcaaaccacatt 2308119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 21237707 - 21237802
Alignment:
Q  47 ttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct-agtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatt 141  Q
    |||||||||||||||||||||||  |||||||||||||| |||||| |  |||||||||||  ||||| ||||||| ||||| |||| ||| ||||    
T  21237707 ttttttaacttgattttaatgttgaaaacaaaaaattgttttgtctgataaaaaaaccgcacaaaccgttccaaccgaaaccgcattggtttgatt 21237802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 48642956 - 48642800
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||||| ||||||| || |||||||||||||||||||| |  ||  | ||||||||||  ||| | ||||||| ||| ||| |||||||||| |||||     
T  48642956 aaatatggtgtgtttaagctttttaacttgattttaatgctgtaa--agaaaattgtatcttctcgaaaaaaactgcaccaatcgatccaacccaaaccg 48642859  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    |||| ||| | |||| ||| ||||  |||| ||||  |||||||||||||| |||||||    
T  48642858 cattggtttggtttggtttggttcaaatttaatttttaaagtcaaccgaaccaaaccaa 48642800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 41459352 - 41459246
Alignment:
Q  21 attgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctag-taaaaaaccgcaacaaccgatccaa 119  Q
    |||||| ||||||||||||| |||||  |||||||| |||||||||||| |||||||||  | ||||||||| |  ||||||||||| ||| | ||||||    
T  41459352 attgttggaaatatgttgtgctttagccttttaactcgattttaatgttggaaacaaaaggtcgtattgtctcgaaaaaaaaccgcatcaatcaatccaa 41459253  T
Q  120 cctaaac 126  Q
    || ||||    
T  41459252 cccaaac 41459246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 26215153 - 26215261
Alignment:
Q  154 gatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccg 253  Q
    ||||| |||| ||||||||||||||| |||| || || ||| |||| ||||||||  |||||||||||| ||||  |||||| | ||||| || |||||     
T  26215153 gattttattttaaaagtcaaccgaaccaaacaaacccgtatgctttattatcttgcggtttggatgacttttaacctcaaaaccaaaccaaaccgcacca 26215252  T
Q  254 gaaacaccc 262  Q
    |||||||||    
T  26215253 gaaacaccc 26215261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 27100927 - 27100979
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||| |||||||||| ||||||| |||||||||||||| |||||||||||    
T  27100927 aaatatgctgtgttttagatttttaatttgattttaatgttggaaacaaaaaa 27100979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 27177376 - 27177324
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||| |||||||||| ||||||| |||||||||||||| |||||||||||    
T  27177376 aaatatgctgtgttttagatttttaatttgattttaatgttggaaacaaaaaa 27177324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 31287679 - 31287781
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||| ||||  ||||||| |||||||||||||| |||||||||||   |||||||||  ||| ||||||| |||| ||||||| | |||||     
T  31287679 aaatatgttgtggtttaactttttaatttgattttaatgttggaaacaaaaaaaattattgtcta-aaaacaaccgcaccaacggatccaatccaaaccg 31287777  T
Q  129 catt 132  Q
    ||||    
T  31287778 catt 31287781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 11834367 - 11834429
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaa 80  Q
    |||||||||  |||||||||||||||||| ||||||| |||||||||| |||  |||||||||    
T  11834367 aacattgttgaaaatatgttgtgttttagctttttaatttgattttaacgttgaaaacaaaaa 11834429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 23675559 - 23675485
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    |||||| || ||||||| |||||||||||||||||||||  ||||||| |||  ||| |||||||||| ||||||    
T  23675559 aacattattggaaatatattgtgttttagttttttaactcaattttaacgttgaaaataaaaaattgtgttgtct 23675485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 30855264 - 30855163
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttga-ttttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    ||||||||||||||  ||||||||||||||| ||||||||||  |||||||||||||   ||||   |||||||| ||| |||| ||||||||  |||||    
T  30855264 aaatatgttgtgttccagttttttaacttgatttttaatgttgaaaacaaaaaattg---tgtcgtttaaaaaactgcaccaactgatccaacacaaacc 30855168  T
Q  128 acatt 132  Q
    |||||    
T  30855167 acatt 30855163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 33434293 - 33434217
Alignment:
Q  28 gaaatatgttgtgttttagttttttaa---cttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaa 101  Q
    |||| ||||||| |||||| |||||||   ||||||||||||||| |||||||| ||||||||||||| | ||||||    
T  33434293 gaaacatgttgttttttaggtttttaataacttgattttaatgttggaaacaaataattgtattgtcttgaaaaaaa 33434217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 16359318 - 16359257
Alignment:
Q  50 tttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaac 111  Q
    |||||||||||||||||||| |||| ||||| ||||||||||| |  |||||| ||||||||    
T  16359318 tttaacttgattttaatgttggaaagaaaaatttgtattgtctcgataaaaactgcaacaac 16359257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 31012969 - 31013029
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgt 90  Q
    |||||| ||||||||||  ||||||||||| ||||||||||  |||||||||||||||||||    
T  31012969 aaatatattgtgttttaactttttaacttg-ttttaatgttgaaaacaaaaaattgtattgt 31013029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 47483801 - 47483728
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtc 91  Q
    ||||| ||| ||||||||||||||   | |||||||||| ||||||||||||  ||||||||||| ||||||||    
T  47483801 aacatggttggaaatatgttgtgtaacaattttttaactcgattttaatgttgaaaacaaaaaatcgtattgtc 47483728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 7685851 - 7685935
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    ||||||||||||||||||||||  ||||||||||||| ||| ||| |  ||||||| ||  | ||||||||||| ||||| ||||    
T  7685851 tttttaacttgattttaatgttaaaaacaaaaaattgaattatctcgacaaaaaccacacaatccgatccaacccaaaccgcatt 7685935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 524770 - 524872
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| | ||||||||||||| ||||  || ||||||  |||||||||||  ||| ||||||||||||||||| | ||||| | ||| ||||| ||||    
T  524770 aacattgctggaaatatgttgtgctttaccttcttaactcaattttaatgttgaaaataaaaaattgtattgtctcg-aaaaagctgcaccaacctatcc 524868  T
Q  118 aacc 121  Q
    ||||    
T  524869 aacc 524872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 16535674 - 16535797
Alignment:
Q  53 aacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttc 152  Q
    ||||||||||||||||| ||||  |||| |||||||||||   ||||||||||| | ||| ||||||   |||||||||| |||    ||| ||| ||||    
T  16535674 aacttgattttaatgttggaaa--aaaatttgtattgtctca-aaaaaaccgcatccaccaatccaaatcaaaccacattagtttagattggtttggttc 16535770  T
Q  153 ggatttgatttaaaaagtcaaccgaac 179  Q
    |||||| |||| |||||||||||||||    
T  16535771 ggattttattttaaaagtcaaccgaac 16535797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 16629988 - 16629865
Alignment:
Q  53 aacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttc 152  Q
    ||||||||||||||||| ||||  |||| |||||||||||   ||||||||||| | ||| ||||||   |||||||||| |||    ||| ||| ||||    
T  16629988 aacttgattttaatgttggaaa--aaaatttgtattgtctca-aaaaaaccgcatccaccaatccaaatcaaaccacattagtttagattggtttggttc 16629892  T
Q  153 ggatttgatttaaaaagtcaaccgaac 179  Q
    |||||| |||| |||||||||||||||    
T  16629891 ggattttattttaaaagtcaaccgaac 16629865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 23707051 - 23707086
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaatt 83  Q
    |||||||||||||||||||||| |||||||||||||    
T  23707051 tttttaacttgattttaatgttggaaacaaaaaatt 23707086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 36875268 - 36875355
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgtt 136  Q
    ||||||||||||||||||||||   | |||| ||||||||||||  |||||| |  |||||||| | ||||| |||||| ||||||||    
T  36875268 ttttaacttgattttaatgttccttaaaaaatattgtattgtctcataaaaatctccaacaaccaaaccaacttaaacctcatttgtt 36875355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 1032947 - 1033013
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccga 114  Q
    |||||||||| ||||| ||||| | ||||||||||||||| || |  ||||||||| ||||||||||    
T  1032947 tttttaacttaattttgatgtttgtaacaaaaaattgtatcgtgtcataaaaaaccacaacaaccga 1033013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 7209309 - 7209387
Alignment:
Q  165 aaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcgaacca 243  Q
    |||| |||||||||| ||||||| || ||| ||||||||||| |  |||||||||||| |||  ||||||| |||||||    
T  7209309 aaaaatcaaccgaaccaaaccaaaccgtatgcttttttatctcgtggtttggatgacttttatattcaaaaccgaacca 7209387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 22701215 - 22701285
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtatt 88  Q
    |||||||||  ||||||||| |||||||  ||||||||| ||||||||| ||  |||||||||||| ||||    
T  22701215 aacattgttgaaaatatgttatgttttatctttttaactagattttaatattgaaaacaaaaaattatatt 22701285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 43908814 - 43908752
Alignment:
Q  59 attttaatgttcgaaacaaaaaattgtattgtctag-taaaaaaccgcaacaaccgatccaac 120  Q
    ||||||||||| |||| |||||| ||||||||||||  ||||||| ||||||||||| |||||    
T  43908814 attttaatgttggaaataaaaaagtgtattgtctagcaaaaaaactgcaacaaccgaaccaac 43908752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 20306786 - 20306701
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaacc 103  Q
    |||||||||  ||||||||||||||||   ||||||||| |||||| | ||| |||| ||||||||| |||| || | ||||||||    
T  20306786 aacattgttgaaaatatgttgtgtttttactttttaactcgattttcaagttggaaataaaaaattgcattgcctcgaaaaaaacc 20306701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 27456531 - 27456471
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaa 78  Q
    ||||||||  ||||||||||||||||||  |||| || | |||||||||||| ||||||||    
T  27456531 aacattgtcggaaatatgttgtgttttaccttttcaattcgattttaatgttggaaacaaa 27456471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 8268815 - 8268716
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||| |||| |||||||| |||||||||||||| |||||    
T  8268815 gaaatatgttgtgttttagctttttaacttgattttaatgttgtaaacaaaaaattgcattgtctggtaagaaaccgcaccaaccgatccaacccaaacc 8268716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 35992499 - 35992656
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  ||||||||  |||||||  |||||||||||||||||||||| ||| |||||||||||||||||| | ||||||||||| ||||||||||    
T  35992499 aacattgttgaaaatatgtcttgttttacctttttaacttgattttaatgttggaagcaaaaaattgtattgtctcgaaaaaaaccgcaccaaccgatcc 35992598  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaacc 175  Q
    || | ||||| |||| ||| | |||| ||| | | |||||| |||| |||||||||||    
T  35992599 aaaccaaaccgcattagtttggtttggtttggattggattttattttaaaagtcaacc 35992656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 32910267 - 32910487
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  ||||||||||||||| |  |||||||||||||||||||||| ||||||||||||||||| |||| | |||||| | || ||||||||||    
T  32910267 aacattgttgaaaatatgttgtgtttaaactttttaacttgattttaatgttggaaacaaaaaattgtatcgtctcgaaaaaaatcacaccaaccgatcc 32910366  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttgga 217  Q
    |||  ||||| ||||||     |||| ||| |||| ||||  ||||  |||||||||||||| ||||||| |   ||  ||||||||||||  |||||||    
T  32910367 aacacaaaccgcatttg-----tttgttttggttcagattctatttttaaagtcaaccgaaccaaaccaaactgcatgtttttttatcttgcagtttgga 32910461  T
Q  218 tgactcttaatttcaaaatcgaacca 243  Q
    ||||| |||   |||||| |||||||    
T  32910462 tgacttttatcctcaaaaccgaacca 32910487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 35980187 - 35980290
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||| || |||||  |||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||||| || | ||||||    
T  35980187 aaatatgtcgttttttacctttttaacttgattttaatgttggaaacaaaaaattgtattgtctcgaaaaaaaccgcaccaaccgatctaaaccaaacca 35980286  T
Q  129 catt 132  Q
    ||||    
T  35980287 catt 35980290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 10847430 - 10847544
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  |||||||||||||||||  ||||||| ||  |||||||||| |||||||||||||||||||||||| | ||||| ||| ||||| ||||    
T  10847430 aacattgttgaaaatatgttgtgttttaactttttaattttgttttaatgttggaaacaaaaaattgtattgtctagcagaaaactgcatcaaccaatcc 10847529  T
Q  118 aacctaaaccacatt 132  Q
    |||| ||||||||||    
T  10847530 aacccaaaccacatt 10847544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 17651938 - 17651780
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||||| ||||||||| |||||  |  ||||||||| |||||||||||| |||||||||||||||||||| |   ||||||||||| ||||| ||||    
T  17651938 aacattgttggaaatatgtcgtgtt--acctttttaactcgattttaatgttggaaacaaaaaattgtattgtttca-aaaaaaccgcatcaaccaatcc 17651842  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaac 179  Q
    || | ||||| |||| ||| | |||| || ||||||||||| |||| |||||||||||||||    
T  17651841 aaaccaaaccgcattggtttggtttggttcagttcggattttattttaaaagtcaaccgaac 17651780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 34914300 - 34914199
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||| ||||||| ||||||||||| || |||||||||||   |||||||||  |||||||||||||||||||||||| | ||||||    
T  34914300 aaatatgttgtgttttaggtttttaatttgattttaatattggaaacaaaaaaaaatattgtcta--aaaaaaccgcaacaaccgatccaatccaaacca 34914203  T
Q  129 catt 132  Q
    ||||    
T  34914202 catt 34914199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 243
Target Start/End: Original strand, 36203346 - 36203561
Alignment:
Q  29 aaatatgttgtgtttt-agttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaacc-gcaacaaccgatccaacctaaac 126  Q
    |||||||||||||||| |  ||||||||| ||||| |||||| |||||||||||||  ||||||| | |||||| | ||| ||||| |||||||| ||||    
T  36203346 aaatatgttgtgtttttacgtttttaactcgattt-aatgttggaaacaaaaaattccattgtctcgaaaaaaaactgcaccaaccaatccaacccaaac 36203444  T
Q  127 cacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactctta 226  Q
    | |||| ||| | |||| ||  |||||||||  |||| ||||||||||||||| ||| ||| ||  || |||||||||||||  |||||||||||| |||    
T  36203445 cgcattagtttggtttggttcggttcggattgtattttaaaagtcaaccgaaccaaatcaaaccgcatgcttttttatcttgcggtttggatgactttta 36203544  T
Q  227 atttcaaaatcgaacca 243  Q
    |  |||||| |||||||    
T  36203545 acctcaaaaccgaacca 36203561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 382246 - 382132
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||| || ||||| | |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| | |||||||| || |||||| |||    
T  382246 aacattgctaaaaataagatgtgttttagttttttaacttgattttaatgtttaaaacaaaaaattgcattgtctcgaaaaaaaccacatcaaccggtcc 382147  T
Q  118 aacctaaaccacatt 132  Q
    || | |||| |||||    
T  382146 aatccaaactacatt 382132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 15880060 - 15880175
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||| ||||  |||||||||||||||||||||| ||||||||||||||| |||||||  ||||||  ||| |||||||||||||||||| |     
T  15880060 aaatatgttgtgatttacctttttaacttgattttaatgttggaaacaaaaaattgtgttgtcta--aaaaaaatgcaccaaccgatccaacctaaatcg 15880157  T
Q  129 catttgttcgatttgatt 146  Q
    ||||  || |||||||||    
T  15880158 cattgatttgatttgatt 15880175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 32937993 - 32938095
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||| |||||||||||| ||| | | ||||| | | |||||||||||||| ||||||    
T  32937993 aaatatgttgtgttttagctttttaacttgattttaatgtaggaaac-aaaaattgtattatctcggagaaaactgtaccaaccgatccaacccaaacca 32938091  T
Q  129 catt 132  Q
    ||||    
T  32938092 catt 32938095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 8165456 - 8165605
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||| ||||||||| || |||||||||| | ||||||||| ||||||||||||  ||| | |||  ||||||| |||| ||||||||||||| |||||     
T  8165456 aaataggttgtgtttcagctttttaacttaactttaatgttggaaacaaaaaataatatcggctaa-aaaaaacagcaataaccgatccaacccaaaccg 8165554  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaac 179  Q
    |||||||| | |||| ||| |||| ||||| ||||  ||||||||||||||    
T  8165555 catttgtttggtttggtttggttcagattttatttttaaagtcaaccgaac 8165605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 11074294 - 11074481
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  ||||||||||  ||| || |||||||||| ||||||||||| |||||||||||| |||| ||||   ||||||||| | ||||||||||    
T  11074294 aacattgttgaaaatatgttgcatttaagctttttaactttattttaatgttggaaacaaaaaatggtatcgtct--caaaaaaccgtatcaaccgatcc 11074391  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatctt 207  Q
    || | ||||| ||||  || | |||| ||  |||| ||||| ||||  |||||||||||||| ||||||| || |||  |||||||||||    
T  11074392 aatccaaaccgcattgatttggtttggttaggttcagattttatttttaaagtcaaccgaaccaaaccaaaccgtatgtttttttatctt 11074481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 12973748 - 12973505
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaa-aaattgtattgtctagtaaaaaaccgcaacaaccgatc 116  Q
    ||||||| || |||||||||| ||||||  ||||||| ||||||||||||||  ||||||| |||   |||||||||  ||||||||||| |||||||||    
T  12973748 aacattgctaaaaatatgttgcgttttaactttttaatttgattttaatgttgtaaacaaagaaagattattgtcta--aaaaaaccgcaccaaccgatc 12973651  T
Q  117 caacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttgg 216  Q
    ||| | |||||||||| ||| | |||| |||  ||||||||| ||||  ||| |||||| ||| ||||||| ||  ||  || |||||||||  ||| ||    
T  12973650 caatccaaaccacattagtttggtttggtttgattcggattttattttcaaaatcaaccaaaccaaaccaaaccgcatatttatttatcttgcggttcgg 12973551  T
Q  217 atgactcttaatttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
    |||||| | |  ||||||| ||||||| || ||||||  |||||||    
T  12973550 atgactttcagcttcaaaaccgaaccaaaccgcaccgcgaacaccc 12973505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 23475007 - 23475173
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||||| || ||||||||| |||||| |||||||||| ||||||||||| ||||||||||||||||||| || | || |||| ||| | |||||| |    
T  23475007 aacattgttggagatatgttgt-ttttagctttttaacttaattttaatgttggaaacaaaaaattgtattgcctcg-aagaaactgcacccaccgattc 23475104  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaacca 186  Q
    || | ||||| |||| ||| | |||| ||| ||||  |||| |||| |||| |||||||||| ||||||    
T  23475105 aatccaaaccgcattagtttggtttggttttgttcaaattttattttaaaaatcaaccgaaccaaacca 23475173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 25559909 - 25560053
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||||||| |||| || |||||||||||||| |||| ||||||   ||||||||| |||||||||||| ||||||||||||   |||||     
T  25559909 aaatatgttgtgttttaggttttaaatttgattttaatgtt-gaaaaaaaaaa---tattgtcta-taaaaaaccgcaccaaccgatccaattcaaaccg 25560003  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaac 179  Q
    |||| |||   |||| ||| |||||||||| |||| |||||||||||||||    
T  25560004 cattggttttgtttggtttggttcggattt-attttaaaagtcaaccgaac 25560053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 16537738 - 16537848
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaac--aaaaaattgtattgtctagtaaaaaaccgcaacaaccgat 115  Q
    ||||||| | ||||||||||||||||||| |||||||||||  ||||  ||| |||||  ||||||||||||||||| | ||||||||||| |||| |||    
T  16537738 aacattgcttgaaatatgttgtgttttaggtttttaacttggctttagcgttggaaacaaaaaaaattgtattgtctcgaaaaaaaccgcatcaacagat 16537837  T
Q  116 ccaacctaaac 126  Q
    |||||| ||||    
T  16537838 ccaacccaaac 16537848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 9962048 - 9962159
Alignment:
Q  22 ttgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaat-tgtattgtctagtaaaaaaccgcaacaaccgatccaac 120  Q
    ||||| ||||||||||||||||||  |||||||||  |||||||| ||  ||||||||||  ||||||||||   ||||||| ||| |||||||||||||    
T  9962048 ttgttggaaatatgttgtgttttatatttttaactcaattttaatattgaaaacaaaaaaaatgtattgtctcaaaaaaaactgcatcaaccgatccaac 9962147  T
Q  121 ctaaaccacatt 132  Q
    | ||||||||||    
T  9962148 ccaaaccacatt 9962159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 17989236 - 17989075
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  |||||||||||||||||  |||||||||  |||||||||||  ||||||||| || |||||||| | |||||| |||| |||| |||||    
T  17989236 aacattgttgaaaatatgttgtgttttacctttttaactccattttaatgttgaaaacaaaaatttctattgtctcg-aaaaaaacgcaccaacagatcc 17989138  T
Q  118 aa-cctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaac 179  Q
    || || ||||| ||||  || | |||   || |||||||||| |||| |||||||||||||||    
T  17989137 aacccaaaaccgcattgatttggtttaggttggttcggattttattttaaaagtcaaccgaac 17989075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 19051280 - 19051184
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    |||||||||||||||||  ||||||||||||||||||||||  |||| ||||| | |||||||| | ||||||| ||| |||||||||||||| |||||    
T  19051280 aaatatgttgtgttttaactttttaacttgattttaatgttgaaaacgaaaaagt-tattgtcttg-aaaaaacggcatcaaccgatccaacccaaacc 19051184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 26344962 - 26345111
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaac--aaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||||||||||||||  ||||||| |||||||||||||| |||||  ||||||    | ||||||  ||| ||||||| |||||||||||| | ||||    
T  26344962 aaatatgttgtgttttaactttttaatttgattttaatgttggaaaccaaaaaaaaaaaaatgtcta--aaataaccgcaccaaccgatccaatccaaac 26345059  T
Q  127 cacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaa 178  Q
    | |||| ||| | |||  ||| |||||||||| |||| ||||||||||||||    
T  26345060 cgcattggtttggttttgtttggttcggattttattttaaaagtcaaccgaa 26345111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 187
Target Start/End: Original strand, 39158233 - 39158385
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||||||||||| ||| |||||||||||||||||| ||   ||||||||||||||||      |  ||||||| || |||  ||||||||| ||||||    
T  39158233 aaatatgttgtgttctagctttttaacttgattttaacgtcgaaaacaaaaaattgtat------gagaaaaaccacaccaattgatccaacccaaacca 39158326  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    |||| ||| | |||| |||  ||| ||||| |||| ||||| | |||||||||||||||    
T  39158327 cattggtttggtttggtttgattcagattttattttaaaagccgaccgaactaaaccaa 39158385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 50153584 - 50153408
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||||||||||||||  ||| |||| ||  ||||||||||  ||||||||||||||||||| | | | ||||| |||  ||||||| || || |||| |    
T  50153584 aaatatgttgtgtttttctttgttaatttc-ttttaatgttgaaaacaaaaaattgtattgtatcg-ataaaactgcacaaaccgattcaccc-aaacta 50153488  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttg 208  Q
    |||  ||| |||||| ||| |||||||||| |||| ||||||||||||||| ||| ||| ||| ||  ||||||||||||    
T  50153487 catacgtttgatttggtttggttcggattttattttaaaagtcaaccgaacaaaatcaaaccacatatttttttatcttg 50153408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 15882053 - 15882127
Alignment:
Q  19 acattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtcta 93  Q
    ||||||||  |||||||||||||||||  ||||||| ||||||| ||||||  |||||||||||||| |||||||    
T  15882053 acattgttgaaaatatgttgtgttttatctttttaatttgatttaaatgttgaaaacaaaaaattgtgttgtcta 15882127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 44055912 - 44055795
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    |||||||||  ||||||| ||| ||| |  ||||||||||||||| | |||| ||||||||||||| |||||| | | |||||||| ||  || ||||||    
T  44055912 aacattgttgaaaatatgatgtatttcaactttttaacttgatttca-tgttggaaacaaaaaattatattgtatcgaaaaaaacctcactaatcgatcc 44055814  T
Q  118 aacctaaaccacatttgtt 136  Q
    |||| ||||||||||||||    
T  44055813 aacccaaaccacatttgtt 44055795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 9330534 - 9330458
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||||  |||||||||||| |||| |||| |||| ||||    
T  9330534 ttttaacatgaatttaatgttggaaacaaaaaattgtattgtct-ctaaaaaaccgcaccaactgatcaaacccaaac 9330458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 50951967 - 50952031
Alignment:
Q  52 taacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatc 116  Q
    ||||||||||||||||||  ||||||||||||||||| | | | ||||||||||| |||||||||    
T  50951967 taacttgattttaatgttgaaaacaaaaaattgtattttgtggaaaaaaaccgcaccaaccgatc 50952031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 25532897 - 25532835
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    ||||||||| |||||||||||||||||||||| |||||||| ||||| ||||  ||||||||||    
T  25532897 aacattgttggaaatatgttgtgttttagtttattaacttg-ttttagtgtttaaaacaaaaaa 25532835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 6694282 - 6694332
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaa 79  Q
    |||||||||||||||||  ||||||| |||||||||||||| |||||||||    
T  6694282 aaatatgttgtgttttaactttttaatttgattttaatgttggaaacaaaa 6694332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 40095314 - 40095428
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaa--aaattgtattgtctagtaaaaaaccgcaacaaccgat 115  Q
    |||||||||  |||||||||| ||||||| ||||||| || |||||||||||  |||||||  |||   |||||||||  || |||||||| ||||||||    
T  40095314 aacattgttgaaaatatgttgcgttttagctttttaatttaattttaatgttgaaaacaaaagaaaaattattgtcta--aataaaccgcaccaaccgat 40095411  T
Q  116 ccaacctaaaccacatt 132  Q
    |||| | ||||||||||    
T  40095412 ccaatccaaaccacatt 40095428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 47984409 - 47984482
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaa 101  Q
    |||| |||||||||||||  ||||||||| |||||||||||   |||||||||||||| |||||| | ||||||    
T  47984409 gaaacatgttgtgttttacctttttaactcgattttaatgtcgaaaacaaaaaattgtgttgtcttgaaaaaaa 47984482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 9250035 - 9250110
Alignment:
Q  50 tttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||| ||||||||||||  |||||||||| |||||||||||  ||||||||| ||||||  ||||||||| ||||    
T  9250035 tttaacatgattttaatgtaggaaacaaaaatttgtattgtct-ctaaaaaacctcaacaaatgatccaacccaaac 9250110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 25507036 - 25506981
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaatt 83  Q
    |||||||||| |||||||| ||||||||||||||||||  ||  ||||||||||||    
T  25507036 gaaatatgttttgttttagctttttaacttgattttaactttgaaaacaaaaaatt 25506981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 29923212 - 29923259
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaa 65  Q
    ||||||| | |||||||| |||||||||||||||||||| ||||||||    
T  29923212 aacattgctggaaatatgctgtgttttagttttttaactcgattttaa 29923259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 2490052 - 2490166
Alignment:
Q  149 gttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactg 248  Q
    ||||| |||| |||| |||||||||| |||| |||||||  |  || ||| |||||||||  ||| |||| ||| |||   |||||||||||||| ||||    
T  2490052 gttcgaattttattttaaaagtcaactgaaccaaaccaaatcgcatacttatttatcttgcggttcggataacttttagcctcaaaatcgaaccaaactg 2490151  T
Q  249 caccggaaacaccct 263  Q
    ||||| |||||||||    
T  2490152 caccgcaaacaccct 2490166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 6248249 - 6248138
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttga-ttttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    |||||| ||||||||||| ||||||| |||| |||||| ||| |||||| ||||   |||||||||  ||||||||||| ||||| |||||| | |||||    
T  6248249 aaatatattgtgttttagctttttaatttgatttttaacgttggaaacataaaaaaatattgtcta--aaaaaaccgcatcaacctatccaatccaaacc 6248152  T
Q  128 acatttgttcgatt 141  Q
     |||| ||| ||||    
T  6248151 gcattggtttgatt 6248138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 9330434 - 9330388
Alignment:
Q  160 atttaaaaagtcaaccgaactaaaccaatccatattcttttttatct 206  Q
    |||| ||||||||||||||||||||||| ||| || |||||||||||    
T  9330434 attttaaaagtcaaccgaactaaaccaaaccacatacttttttatct 9330388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 50471386 - 50471297
Alignment:
Q  43 ttagttttttaacttgattttaatgttcgaaacaaaaaatt-gtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    |||| ||||||| |||||||||||||| |||||||||||||  |||||||||  | ||||| ||| ||||||||| || ||||||| ||||    
T  50471386 ttagctttttaatttgattttaatgttggaaacaaaaaattattattgtcta-aataaaacggcaccaaccgatctaatctaaaccgcatt 50471297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 21907058 - 21907005
Alignment:
Q  48 tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaa 101  Q
    |||||||||| |||||||| || ||||||||||||||| ||||||  |||||||    
T  21907058 tttttaactttattttaatattggaaacaaaaaattgtgttgtctcataaaaaa 21907005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 51252455 - 51252552
Alignment:
Q  165 aaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
    |||| |||||| ||| ||||||| ||| || ||||||||||| |  |||||||||||| |||   |||||||||||||| || ||||||  |||||||    
T  51252455 aaaaatcaacccaaccaaaccaaaccacatgcttttttatctcgcggtttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcgaacaccc 51252552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 36797946 - 36798010
Alignment:
Q  29 aaatatgttgtgttttagtttt-ttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    |||||| ||||||||||  ||| |||||||||||||||||||  |||||||||||  ||||||||    
T  36797946 aaatatattgtgttttaactttgttaacttgattttaatgttaaaaacaaaaaatgatattgtct 36798010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 6591401 - 6591248
Alignment:
Q  33 atgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    |||||||||||||| ||||||||| |||||||| ||| |||| |||||||||||||||||   ||||||||| | ||||| |||||||  ||||||||||    
T  6591401 atgttgtgttttagctttttaactcgattttaaagttggaaataaaaaattgtattgtct-caaaaaaaccgtaccaaccaatccaactcaaaccacatt 6591303  T
Q  133 tgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
      || | |||| ||| ||| | |||| |||| ||||||||||||||| |||||||    
T  6591302 gttttggtttggtttggttagaattttattttaaaagtcaaccgaaccaaaccaa 6591248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 6617096 - 6616943
Alignment:
Q  33 atgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    |||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||||||   ||||||||| | ||||| |||| ||  ||||||||||    
T  6617096 atgttgtgttttagctttttaactcgattttaaagttggaaacaaaaaattgtattgtct-caaaaaaaccgtaccaaccaatcctactcaaaccacatt 6616998  T
Q  133 tgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
      || | |||| ||| ||| | |||| |||| ||||||||||||||  |||||||    
T  6616997 gttttggtttggtttggttagaattttattttaaaagtcaaccgaaacaaaccaa 6616943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 9012749 - 9012849
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||| ||||||||||||||||||||||||||||| ||   ||||||||||||| ||||||||   ||||||||||| |||||||||||||| |||||     
T  9012749 aaatattttgtgttttagttttttaacttgattttactg-cggaaacaaaaaattatattgtct--caaaaaaccgcaccaaccgatccaacccaaaccg 9012845  T
Q  129 catt 132  Q
    ||||    
T  9012846 catt 9012849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 40436608 - 40436507
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    |||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||||||| ||| |  ||||||||||| |||||||||||||| |||||    
T  40436608 gaaatatgttgtgtttcagttttttaacttaattttaatgtt-gaaa-aaaaaattgtatcgtc-acgaaaaaaccgcaccaaccgatccaacccaaacc 40436512  T
Q  128 acatt 132  Q
     ||||    
T  40436511 gcatt 40436507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 253
Target Start/End: Original strand, 15272210 - 15272434
Alignment:
Q  29 aaatatgttgtgttttagt-tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    |||||||||||||||||   ||||||||| |||||| ||||| |||| ||||||||| || ||||   ||||||||||| |||||||||||||| ||||     
T  15272210 aaatatgttgtgttttaccgtttttaactcgattttgatgttggaaataaaaaattggatcgtctca-aaaaaaccgcaccaaccgatccaacccaaact 15272308  T
Q  128 acatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaa 227  Q
     |||||||| | |||| ||| |||||||||    || ||||||||||  ||| ||||||| ||   | |||||||||| ||  ||| |||||||| ||||    
T  15272309 gcatttgtttggtttggtttggttcggattgtgcttgaaaagtcaactaaaccaaaccaaaccgcgtgcttttttatcctgccgttcggatgacttttaa 15272408  T
Q  228 tttcaaaatcgaaccacactgcaccg 253  Q
    | |||||| || |||| || ||||||    
T  15272409 tctcaaaaccgtaccaaaccgcaccg 15272434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 253
Target Start/End: Original strand, 15452579 - 15452803
Alignment:
Q  29 aaatatgttgtgttttagt-tttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    |||||||||||||||||   ||||||||| |||||| ||||| |||| ||||||||| || ||||   ||||||||||| |||||||||||||| ||||     
T  15452579 aaatatgttgtgttttaccgtttttaactcgattttgatgttggaaataaaaaattggatcgtctca-aaaaaaccgcaccaaccgatccaacccaaact 15452677  T
Q  128 acatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaa 227  Q
     |||||||| | |||| ||| |||||||||    || ||||||||||  ||| ||||||| ||   | |||||||||| ||  ||| |||||||| ||||    
T  15452678 gcatttgtttggtttggtttggttcggattgtgcttgaaaagtcaactaaaccaaaccaaaccgcgtgcttttttatcctgccgttcggatgacttttaa 15452777  T
Q  228 tttcaaaatcgaaccacactgcaccg 253  Q
    | |||||| || |||| || ||||||    
T  15452778 tctcaaaaccgtaccaaaccgcaccg 15452803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 3129474 - 3129570
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacc 127  Q
    ||||||||| |||||||| ||||||||| ||||||||||||  ||||||||||||| ||||||||  ||||||  ||| ||||| |||||||| |||||    
T  3129474 aaatatgttatgttttagatttttaactcgattttaatgttgaaaacaaaaaattgcattgtcta--aaaaaaatgcaccaaccaatccaacccaaacc 3129570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 12074087 - 12074161
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtct 92  Q
    ||||||| | ||||||||||||||||| |  |||||| || ||||||||||| ||||||||||||||||||||||    
T  12074087 aacattgctcgaaatatgttgtgtttttgcattttaaattaattttaatgttggaaacaaaaaattgtattgtct 12074161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 12912673 - 12912604
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtat 87  Q
    ||||||| | |||||||||||||||||| | |||||||||||||||||||||  |||||||||| |||||    
T  12912673 aacattgctggaaatatgttgtgttttaatgttttaacttgattttaatgttgaaaacaaaaaactgtat 12912604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 28073125 - 28073186
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaa 110  Q
    |||||||||||||||||||||  |||||||||||||||| |||| | |||||||||||||||    
T  28073125 ttttaacttgattttaatgttgaaaacaaaaaattgtatcgtctcgcaaaaaaccgcaacaa 28073186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 29914524 - 29914601
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaac 126  Q
    |||||||||||| |||||||| ||||||||||||||||||||||   |||||| |||||||| ||| ||| |||||||    
T  29914524 ttttaacttgatcttaatgttagaaacaaaaaattgtattgtctcacaaaaaatcgcaacaatcgaaccaccctaaac 29914601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 253
Target Start/End: Complemental strand, 44336893 - 44336726
Alignment:
Q  85 tattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaac 184  Q
    |||||||||| ||||||||||| |||  ||||||||| |||||||||  ||| | |||| ||| |||||||||  |||| ||||||||||||||| ||||    
T  44336893 tattgtctag-aaaaaaccgcaccaattgatccaacc-aaaccacataggtttggtttggtttggttcggattgtattttaaaagtcaaccgaaccaaac 44336796  T
Q  185 caatccatat-tcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccg 253  Q
    ||| ||  || | ||||||||||||  ||| |||||||| ||||  |||||| ||||||| || ||||||    
T  44336795 caaaccgcatgttttttttatcttgcggttcggatgacttttaaactcaaaaccgaaccaaaccgcaccg 44336726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 14185804 - 14185840
Alignment:
Q  50 tttaacttgattttaatgttcgaaacaaaaaattgta 86  Q
    |||||||||||||||||||||||||||||||||||||    
T  14185804 tttaacttgattttaatgttcgaaacaaaaaattgta 14185840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 38926340 - 38926392
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    |||||||||||||||||  ||||||||||||||||||||||  ||||||||||    
T  38926340 aaatatgttgtgttttacctttttaacttgattttaatgttgaaaacaaaaaa 38926392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 12660171 - 12660277
Alignment:
Q  31 atatgttgtgttttagttttttaacttgattttaatgtt-cgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccac 129  Q
    ||||| ||||||||||||||||||||||||||| |||||   ||| ||||||||| ||||||| |  ||||||| ||  |||| |||||| | ||||| |    
T  12660171 atatgatgtgttttagttttttaacttgattttgatgttgaaaaaaaaaaaattgaattgtctcgataaaaaccacacaaaccaatccaatccaaaccgc 12660270  T
Q  130 atttgtt 136  Q
    |||||||    
T  12660271 atttgtt 12660277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 243
Target Start/End: Complemental strand, 4785409 - 4785200
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    |||||| ||||||||||  ||||||| |||||||||||||| |||| |||||||  ||||| |   ||||||||||||  |||| ||||||   |||||     
T  4785409 aaatatattgtgttttaactttttaatttgattttaatgttggaaaaaaaaaat--tattgcc---taaaaaaccgcactaaccaatccaattcaaaccg 4785315  T
Q  129 catttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaat 228  Q
    |||| ||| | |||| ||| ||||  |||  |||| ||||||||||||||| ||| ||| ||  || |||||||||  ||  ||| | |||||| |||||    
T  4785314 cattggtttggtttggtttggttcatattatattttaaaagtcaaccgaaccaaatcaaaccgcatacttttttattctgcggttcgtatgacttttaat 4785215  T
Q  229 ttcaaaatcgaacca 243  Q
     |||||| |||||||    
T  4785214 ctcaaaaccgaacca 4785200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 262
Target Start/End: Complemental strand, 33566068 - 33565900
Alignment:
Q  96 aaaaaaccgcaacaaccgatccaacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaatc--cata 193  Q
    ||||||||||| |||||||||||| | ||||| || | ||| | |||| ||| ||||| |||| |||| | ||||||||||||| ||||||| |  ||||    
T  33566068 aaaaaaccgcaccaaccgatccaatcaaaaccgcactggtttggtttggtttggttcgaattttattttagaagtcaaccgaaccaaaccaaaccgcata 33565969  T
Q  194 ttcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
     | ||||||||||||  |||   |||||| |||   |||||| | ||||| ||||||||| ||||||||    
T  33565968 cttttttttatcttgcggttcaaatgacttttagcctcaaaaccaaaccaaactgcaccgcaaacaccc 33565900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 7428339 - 7428410
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgt 90  Q
    ||||||||| ||||||| |||| || |||| ||| |||| |||| ||||||| ||||||||||||||||||||    
T  7428339 aacattgttggaaatatattgtattatagtcttt-aactcgattctaatgttggaaacaaaaaattgtattgt 7428410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 31497512 - 31497563
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaa 80  Q
    |||||||||||||||||  || ||||| ||||||||||||| ||||||||||    
T  31497512 aaatatgttgtgttttaacttattaacctgattttaatgttggaaacaaaaa 31497563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 19539576 - 19539518
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaaca 76  Q
    |||||||||  |||| ||||||||||||  ||||||||||||| |||||||| ||||||    
T  19539576 aacattgtttaaaatttgttgtgttttaactttttaacttgatattaatgttggaaaca 19539518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 28441646 - 28441576
Alignment:
Q  49 ttttaacttgattttaatgttcgaaacaaaa-aattgtattgtctagtaaaaaaccgcaacaaccgatccaac 120  Q
    ||||||||||||||||||| |  |||||||| ||||| ||||||||  ||||||||||| ||||| |||||||    
T  28441646 ttttaacttgattttaatgatgaaaacaaaataattggattgtcta--aaaaaaccgcaccaaccaatccaac 28441576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 12193376 - 12193412
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaa 65  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  12193376 aaatatgttgtgttttagctttttaatttgattttaa 12193412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 12437804 - 12437840
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaa 65  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  12437804 aaatatgttgtgttttagctttttaatttgattttaa 12437840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 22811095 - 22811147
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaa 81  Q
    |||||||||||||||||| ||||||| ||| |||||| |||  ||||||||||    
T  22811095 aaatatgttgtgttttagctttttaatttgcttttaaggttgaaaacaaaaaa 22811147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 33566122 - 33566082
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgtt 69  Q
    |||||||||||||||||| ||||||| ||||||||| ||||    
T  33566122 aaatatgttgtgttttagctttttaatttgattttagtgtt 33566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 26037 - 25883
Alignment:
Q  28 gaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaa-ccgatccaacctaaac 126  Q
    ||||||||||||||||||  ||||||||| ||||||||||||  ||||||||||||||||||||| | |||||||| || ||| |||||||||   ||||    
T  26037 gaaatatgttgtgttttacctttttaactcgattttaatgttgaaaacaaaaaattgtattgtctcg-aaaaaaccacaccaacccgatccaattcaaac 25939  T
Q  127 cacatttgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
    | ||||     |||||| ||| ||| |||||| |||| ||||||||||||||| |||||||    
T  25938 cgcatt-----gatttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaa 25883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 260
Target Start/End: Complemental strand, 14694 - 14470
Alignment:
Q  29 aaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaacca 128  Q
    ||||||||||| |||||  ||||||||| ||||||||||||  |||||||||||||||||||||   ||||||||||| |||| ||||||| | |||||     
T  14694 aaatatgttgtattttacctttttaactcgattttaatgttgcaaacaaaaaattgtattgtct-caaaaaaaccgcaccaactgatccaaac-aaaccg 14597  T
Q  129 catttgttcgatttgatttagttcggatt-tgatttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaa 227  Q
    ||||||     |||| ||| ||||||||| || ||| || ||||||| |||| |||||||  |  || |||||||||||||  ||| |||||||| ||||    
T  14596 catttg-----tttggtttggttcggattgtgcttt-aagagtcaactgaaccaaaccaaatcgcatgcttttttatcttgcggttcggatgacttttaa 14503  T
Q  228 tttcaaaatcgaaccacactgcaccggaaacac 260  Q
     |||||||  |||||| || |||||| ||||||    
T  14502 cttcaaaactgaaccaaaccgcaccgcaaacac 14470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 6414 - 6261
Alignment:
Q  33 atgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatccaacctaaaccacatt 132  Q
    |||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||||||   ||||||||| | ||||| |||| ||  ||||||||||    
T  6414 atgttgtgttttagctttttaactcgattttaaagttggaaacaaaaaattgtattgtct-caaaaaaaccgtaccaaccaatcctactcaaaccacatt 6316  T
Q  133 tgttcgatttgatttagttcggatttgatttaaaaagtcaaccgaactaaaccaa 187  Q
      || | |||| ||| ||| | |||| |||| ||||||||||||||  |||||||    
T  6315 gttttggtttggtttggttagaattttattttaaaagtcaaccgaatcaaaccaa 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 6185 - 6030
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtattgtctagtaaaaaaccgcaacaaccgatcc 117  Q
    ||||||||| ||| ||||||| ||||||| ||||||| |||||||| |||||  ||||||||||||| ||||| | |  || ||| |||  |||||||||    
T  6185 aacattgttggaagtatgttgcgttttagctttttaatttgattttgatgttgtaaacaaaaaattgaattgtttcgataacaactgcacaaaccgatcc 6086  T
Q  118 aacctaaaccacatttgttcgatttgatttagttcggatttgatttaaaaagtcaa 173  Q
    |||| ||||| |||| ||| | |||| ||| ||||| |||| |||| |||| ||||    
T  6085 aacccaaaccgcattggtttggtttggtttggttcgaattttattttaaaaatcaa 6030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 1346 - 1277
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtatt 88  Q
    ||||||| | |||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||||||    
T  1346 aacattgctggaaatatgttgtgttttagtttattaactt-attttaatgttgaaaacaaaaaattgtatt 1277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 7915 - 7846
Alignment:
Q  18 aacattgttagaaatatgttgtgttttagttttttaacttgattttaatgttcgaaacaaaaaattgtatt 88  Q
    ||||||| | |||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||||||    
T  7915 aacattgctggaaatatgttgtgttttagtttattaactt-attttaatgttgaaaacaaaaaattgtatt 7846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 128679 - 128582
Alignment:
Q  165 aaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
    |||| ||||| |||| ||||||| ||| || |||||||||||||  |||||||||||| |||   |||||||||||||| || |||||| ||||||||    
T  128679 aaaaatcaacagaaccaaaccaaaccacatgcttttttatcttgcggtttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcaaacaccc 128582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 106077 - 105975
Alignment:
Q  160 atttaaaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccggaaaca 259  Q
    |||| |||| |||||||||| ||||||| ||| || |||||||||||||  |||||||||||| ||    |||||||||||||| || ||||||  ||||    
T  106077 attttaaaaatcaaccgaaccaaaccaaaccacatgcttttttatcttgcggtttggatgacttttttgctcaaaatcgaaccaaaccgcaccgcgaaca 105978  T
Q  260 ccc 262  Q
    |||    
T  105977 ccc 105975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 69580 - 69677
Alignment:
Q  165 aaaagtcaaccgaactaaaccaatccatattcttttttatcttggtgtttggatgactcttaatttcaaaatcgaaccacactgcaccggaaacaccc 262  Q
    |||| |||||||||| ||||||| ||| || ||||||||||| |  |||||||||||| |||   |||||||||||||| || ||||||  |||||||    
T  69580 aaaaatcaaccgaaccaaaccaaaccacatgcttttttatctcgcggtttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcgaacaccc 69677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 241135 - 241176
Alignment:
Q  59 attttaatgttcgaaacaaaaaattgtattgtctagtaaaaa 100  Q
    ||||||||||| |||||||| ||||||||||||||| |||||    
T  241135 attttaatgttggaaacaaataattgtattgtctagcaaaaa 241176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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