View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21597_low_3 (Length: 329)
Name: NF21597_low_3
Description: NF21597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21597_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 18 - 321
Target Start/End: Complemental strand, 245053 - 244750
Alignment:
| Q |
18 |
agacatatatttgttttactggatgaagtaaagtcaacccaaaattatcattattgttttaaactatatattgcagaaaattacaaacaaatgaggccat |
117 |
Q |
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| T |
245053 |
agacatatatttgttttactggatgaagtaaagtcaacccaaaattatcattattgttttaaactatatattgcagaaaattacaaacaaatgaggccat |
244954 |
T |
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| Q |
118 |
atttgcggttatgatgtgattaattggcaatttaaaataatgatttttggtgttggtggaattgaaaaatgtatttgtggataagaagtaataggacaga |
217 |
Q |
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| T |
244953 |
atttgcggttatgatgtgattaattggcaatttaaaataatgatttttggtgttggtggaattgaaaaatgtatttgtggataagaagtaataggacaga |
244854 |
T |
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| Q |
218 |
gcactacatacacaaataagaaaagaggatcaaaatttgaatagagcaaaccatggatcacacattttattaatttcaacatttgatcattatacttgat |
317 |
Q |
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| T |
244853 |
gcactacatacacaaataagaaaagaggatcaaaatttgaatagagcaaaccatggatcacacattttattaatttcaacatttgatcattatacttgat |
244754 |
T |
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| Q |
318 |
gatg |
321 |
Q |
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|||| |
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| T |
244753 |
gatg |
244750 |
T |
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