View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21599_high_3 (Length: 448)
Name: NF21599_high_3
Description: NF21599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21599_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 409; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 15 - 431
Target Start/End: Original strand, 36447975 - 36448391
Alignment:
| Q |
15 |
atgaaagaggtcccatttggtcctaatgataaggaaccatgatagccggcctaattttccaagtcacaatccaacaagaatgaggtgttaattaagataa |
114 |
Q |
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| T |
36447975 |
atgaaagaggtcccatttggtcctaatgataaggaaccatgatagccggcctaattttccaagtcacaatccaacaagaatgaggtgttaattaagataa |
36448074 |
T |
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| Q |
115 |
gagtctatttcaccaccttgttcccaccaccaaatcaaagtgagaaaaatcactttcaattgttgagacagattgagagatttatgcttttttaaatggt |
214 |
Q |
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| T |
36448075 |
gagtctatttcaccaccttgttcccaccaccaaatcaaagtgagaaaaatcactttcaattgttgagacagattgtgagatttatgcttttttaaatggt |
36448174 |
T |
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| Q |
215 |
tcttagttcccaatttttctatctgtatcctcttggaccatattaaaagacaaacaaataaaaaaggttacatcttaaccgtccattttgttcatcatca |
314 |
Q |
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| T |
36448175 |
tcttagttcccaatttttctatctgtatcctcttggaccatattaaaagacaaacaaataaaaaaggttacatcttaaccgtccattttgttcatcaaca |
36448274 |
T |
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| Q |
315 |
aaatttatccgaaccatattctccttaccttaatttgcaatagatgcaagtgaatgaatacggttgcagttttgaacaaacaggacatgtacatgctctt |
414 |
Q |
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| T |
36448275 |
aaatttatccgaaccatattctccttaccttaatttgcaatagatgcaagtgaatgaatacggttgcagttttgaacaaacaggacatgtacatgctctt |
36448374 |
T |
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| Q |
415 |
atcttatatgctgtatc |
431 |
Q |
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| T |
36448375 |
atcttatatgctgtatc |
36448391 |
T |
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