View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2159_high_18 (Length: 235)
Name: NF2159_high_18
Description: NF2159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2159_high_18 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 34816105 - 34816311
Alignment:
| Q |
11 |
agcaaagggaaatcaaattcagaaaaagaaaatgtaaatgtgactaacttggtaataacttaaaggccctaacttaaactatccaaagtttcaagccatg |
110 |
Q |
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| T |
34816105 |
agcaaagggaaatcaaattcagaaaaagaaaatgtaaatgtgactaacttggtaataacttaaaggccctaacttaaactatccaaagtttcaagccatg |
34816204 |
T |
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| Q |
111 |
cagacaagcctaatgacttttctatatcatagagagtggaacttactgatgacattataatcaaataaggaaaaacaatcctatgtttgtaaatataggg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34816205 |
cagacaagcctaatgacttttctatatcatagagagtggaacttactgatgacattataatcaaataaggaaaaacaatcctatgtttgtaaatataggg |
34816304 |
T |
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| Q |
211 |
aaaagac |
217 |
Q |
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||||||| |
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| T |
34816305 |
aaaagac |
34816311 |
T |
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