View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2159_high_9 (Length: 413)

Name: NF2159_high_9
Description: NF2159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2159_high_9
NF2159_high_9
[»] chr8 (46 HSPs)
chr8 (163-413)||(37673679-37673929)
chr8 (163-346)||(2603062-2603240)
chr8 (168-410)||(31226395-31226632)
chr8 (161-377)||(35468287-35468497)
chr8 (203-413)||(13628959-13629165)
chr8 (203-413)||(13729371-13729577)
chr8 (160-413)||(1155059-1155311)
chr8 (202-303)||(11777695-11777796)
chr8 (202-412)||(18806492-18806697)
chr8 (161-404)||(23982199-23982441)
chr8 (202-404)||(5535725-5535922)
chr8 (204-287)||(6427146-6427229)
chr8 (161-377)||(14426079-14426290)
chr8 (202-287)||(9134146-9134231)
chr8 (206-374)||(31128518-31128681)
chr8 (202-307)||(5139699-5139804)
chr8 (161-406)||(9604431-9604672)
chr8 (202-359)||(23036789-23036942)
chr8 (214-303)||(5978544-5978633)
chr8 (202-287)||(28540666-28540751)
chr8 (203-307)||(35973409-35973514)
chr8 (202-258)||(10954145-10954201)
chr8 (202-258)||(10962150-10962206)
chr8 (161-258)||(6519115-6519212)
chr8 (332-412)||(4326033-4326113)
chr8 (203-287)||(16531613-16531697)
chr8 (203-287)||(38937788-38937872)
chr8 (203-287)||(8673643-8673727)
chr8 (202-258)||(28557241-28557297)
chr8 (203-254)||(36316758-36316808)
chr8 (203-257)||(5569224-5569278)
chr8 (202-252)||(28575395-28575445)
chr8 (203-256)||(3628225-3628278)
chr8 (203-252)||(28567803-28567852)
chr8 (203-287)||(12734039-12734122)
chr8 (205-256)||(1737803-1737854)
chr8 (337-404)||(36317096-36317163)
chr8 (213-410)||(7288228-7288421)
chr8 (334-404)||(9135123-9135193)
chr8 (202-287)||(9133798-9133882)
chr8 (202-258)||(30462544-30462600)
chr8 (205-287)||(4797277-4797360)
chr8 (206-258)||(45376739-45376787)
chr8 (203-252)||(28562305-28562354)
chr8 (222-287)||(30714093-30714158)
chr8 (222-287)||(30721870-30721935)
[»] chr1 (39 HSPs)
chr1 (1-413)||(13983804-13984239)
chr1 (161-413)||(43822731-43822977)
chr1 (161-401)||(25813691-25813925)
chr1 (203-413)||(52353711-52353916)
chr1 (202-405)||(32851695-32851888)
chr1 (161-284)||(36166846-36166969)
chr1 (202-413)||(42831640-42831847)
chr1 (161-377)||(47783612-47783823)
chr1 (161-412)||(27544326-27544572)
chr1 (162-303)||(40287015-40287154)
chr1 (203-396)||(11120549-11120736)
chr1 (203-377)||(51504491-51504662)
chr1 (203-258)||(36297979-36298034)
chr1 (202-303)||(44665343-44665445)
chr1 (314-412)||(38902066-38902164)
chr1 (203-299)||(11241510-11241607)
chr1 (202-256)||(11569992-11570046)
chr1 (203-412)||(49003288-49003492)
chr1 (204-307)||(22680376-22680480)
chr1 (203-303)||(23333756-23333856)
chr1 (203-258)||(31133165-31133220)
chr1 (203-258)||(33041440-33041495)
chr1 (203-282)||(51061670-51061749)
chr1 (202-256)||(11566954-11567008)
chr1 (307-405)||(47364418-47364515)
chr1 (203-260)||(9505554-9505611)
chr1 (203-258)||(51263186-51263241)
chr1 (331-405)||(35604481-35604555)
chr1 (203-256)||(38118942-38118996)
chr1 (214-284)||(43506265-43506335)
chr1 (203-256)||(641831-641883)
chr1 (202-250)||(24555864-24555913)
chr1 (203-258)||(28278102-28278157)
chr1 (206-256)||(11449221-11449270)
chr1 (202-251)||(38902002-38902051)
chr1 (203-256)||(46591531-46591584)
chr1 (328-396)||(9244597-9244665)
chr1 (331-379)||(33326186-33326234)
chr1 (331-359)||(43675171-43675199)
[»] chr6 (22 HSPs)
chr6 (202-403)||(32977304-32977501)
chr6 (202-412)||(32658349-32658554)
chr6 (163-303)||(21940959-21941099)
chr6 (202-405)||(5002299-5002499)
chr6 (203-358)||(7693900-7694051)
chr6 (202-287)||(22281811-22281896)
chr6 (203-287)||(18804220-18804304)
chr6 (204-259)||(25099074-25099129)
chr6 (202-260)||(6988171-6988229)
chr6 (235-404)||(33755768-33755932)
chr6 (203-250)||(9491836-9491883)
chr6 (207-399)||(387724-387913)
chr6 (202-254)||(7879548-7879600)
chr6 (267-365)||(3543259-3543353)
chr6 (203-258)||(7879164-7879219)
chr6 (203-258)||(7884216-7884271)
chr6 (203-241)||(10078283-10078321)
chr6 (222-287)||(1947019-1947084)
chr6 (329-358)||(6321739-6321768)
chr6 (208-245)||(24848402-24848439)
chr6 (205-258)||(31103446-31103498)
chr6 (240-299)||(9491642-9491702)
[»] chr2 (36 HSPs)
chr2 (161-412)||(14772849-14773094)
chr2 (161-412)||(11921898-11922144)
chr2 (213-403)||(6710804-6710989)
chr2 (162-284)||(26297070-26297192)
chr2 (202-413)||(9583137-9583343)
chr2 (202-412)||(36887492-36887698)
chr2 (162-405)||(26312428-26312664)
chr2 (203-307)||(65416-65521)
chr2 (203-287)||(34234880-34234964)
chr2 (202-287)||(44887284-44887369)
chr2 (203-258)||(13022797-13022852)
chr2 (331-413)||(36267102-36267184)
chr2 (331-412)||(15269316-15269397)
chr2 (203-259)||(6459075-6459131)
chr2 (202-274)||(9733646-9733717)
chr2 (203-412)||(16117835-16118040)
chr2 (203-413)||(34375046-34375249)
chr2 (214-403)||(37347769-37347957)
chr2 (206-289)||(3668837-3668920)
chr2 (203-258)||(5038707-5038762)
chr2 (204-282)||(40999675-40999753)
chr2 (202-303)||(32887631-32887731)
chr2 (203-256)||(39368730-39368783)
chr2 (162-298)||(45135717-45135852)
chr2 (203-259)||(44583436-44583492)
chr2 (203-252)||(6562938-6562986)
chr2 (206-255)||(34820955-34821004)
chr2 (204-255)||(7868356-7868408)
chr2 (334-394)||(9179372-9179432)
chr2 (203-255)||(16341933-16341985)
chr2 (212-255)||(41068866-41068909)
chr2 (203-253)||(3949058-3949108)
chr2 (331-389)||(31050055-31050113)
chr2 (203-303)||(37648316-37648418)
chr2 (333-378)||(14332047-14332092)
chr2 (203-287)||(28857071-28857158)
[»] chr4 (42 HSPs)
chr4 (203-404)||(39055158-39055354)
chr4 (202-413)||(35331906-35332112)
chr4 (202-405)||(52199798-52199996)
chr4 (158-359)||(822356-822551)
chr4 (202-358)||(39629171-39629322)
chr4 (203-413)||(2396294-2396500)
chr4 (202-358)||(23359097-23359248)
chr4 (203-413)||(10180536-10180741)
chr4 (202-410)||(8824959-8825158)
chr4 (211-397)||(12447422-12447603)
chr4 (203-404)||(35144384-35144580)
chr4 (162-289)||(2574091-2574218)
chr4 (206-403)||(35308917-35309110)
chr4 (202-280)||(43968776-43968854)
chr4 (212-386)||(51655132-51655305)
chr4 (203-258)||(30865887-30865942)
chr4 (202-303)||(35382391-35382492)
chr4 (314-413)||(26699109-26699208)
chr4 (203-258)||(44500489-44500544)
chr4 (161-410)||(49210982-49211227)
chr4 (209-287)||(53096652-53096730)
chr4 (252-413)||(45833894-45834049)
chr4 (315-410)||(28909405-28909500)
chr4 (203-261)||(24030621-24030679)
chr4 (213-289)||(22628474-22628550)
chr4 (329-405)||(54018386-54018462)
chr4 (202-284)||(31262461-31262546)
chr4 (203-258)||(54018522-54018577)
chr4 (231-307)||(38865004-38865077)
chr4 (202-243)||(5036047-5036088)
chr4 (204-249)||(8489610-8489655)
chr4 (202-287)||(11346975-11347060)
chr4 (162-376)||(23607308-23607518)
chr4 (202-255)||(41916063-41916116)
chr4 (203-256)||(53779428-53779481)
chr4 (203-246)||(25424376-25424420)
chr4 (207-271)||(25435963-25436027)
chr4 (349-412)||(11933988-11934051)
chr4 (331-389)||(28897710-28897768)
chr4 (315-357)||(44540009-44540051)
chr4 (203-256)||(16461131-16461184)
chr4 (204-256)||(41963674-41963727)
[»] chr7 (39 HSPs)
chr7 (203-405)||(36657819-36658016)
chr7 (202-403)||(43302051-43302247)
chr7 (202-307)||(23156264-23156369)
chr7 (158-271)||(44441347-44441460)
chr7 (203-358)||(31330390-31330541)
chr7 (202-288)||(36901080-36901166)
chr7 (203-359)||(19987155-19987307)
chr7 (161-402)||(36481940-36482176)
chr7 (202-303)||(37698483-37698584)
chr7 (161-413)||(44441545-44441793)
chr7 (203-303)||(2008585-2008685)
chr7 (203-402)||(36656542-36656736)
chr7 (203-413)||(47841344-47841550)
chr7 (203-287)||(13057865-13057950)
chr7 (202-412)||(5513769-5513976)
chr7 (203-287)||(6068093-6068177)
chr7 (207-287)||(39853769-39853849)
chr7 (206-307)||(29914426-29914528)
chr7 (160-257)||(46748101-46748198)
chr7 (203-250)||(19753042-19753089)
chr7 (203-282)||(25307532-25307611)
chr7 (314-397)||(31322251-31322334)
chr7 (203-258)||(48767230-48767285)
chr7 (203-359)||(4958234-4958389)
chr7 (203-256)||(4874941-4874994)
chr7 (203-263)||(15018375-15018435)
chr7 (203-279)||(46282182-46282258)
chr7 (203-258)||(25324574-25324629)
chr7 (203-258)||(36039051-36039106)
chr7 (331-413)||(9429758-9429840)
chr7 (203-256)||(19594045-19594098)
chr7 (203-256)||(27334368-27334421)
chr7 (203-248)||(32724227-32724272)
chr7 (203-255)||(38223971-38224023)
chr7 (202-248)||(23802216-23802262)
chr7 (206-262)||(9429643-9429700)
chr7 (307-352)||(41015398-41015443)
chr7 (266-404)||(23801763-23801905)
chr7 (348-412)||(44441259-44441323)
[»] chr5 (28 HSPs)
chr5 (161-411)||(7293000-7293245)
chr5 (203-412)||(41520785-41520990)
chr5 (161-412)||(18396442-18396687)
chr5 (202-303)||(1309790-1309891)
chr5 (203-303)||(42951760-42951860)
chr5 (202-400)||(26675415-26675608)
chr5 (202-400)||(26947023-26947216)
chr5 (202-287)||(15468166-15468251)
chr5 (202-287)||(2375543-2375628)
chr5 (202-287)||(13420752-13420837)
chr5 (214-287)||(29558344-29558417)
chr5 (206-412)||(8228765-8228967)
chr5 (169-388)||(12593087-12593302)
chr5 (203-287)||(13486580-13486664)
chr5 (203-355)||(837727-837873)
chr5 (331-403)||(11200514-11200586)
chr5 (203-287)||(11200732-11200816)
chr5 (203-308)||(3558768-3558874)
chr5 (203-261)||(34382542-34382600)
chr5 (205-255)||(35463304-35463354)
chr5 (203-258)||(6761441-6761496)
chr5 (205-287)||(42551124-42551207)
chr5 (328-413)||(4935193-4935278)
chr5 (206-259)||(20420168-20420221)
chr5 (210-274)||(1666829-1666893)
chr5 (203-285)||(14642262-14642343)
chr5 (203-249)||(22579669-22579715)
chr5 (203-256)||(31111758-31111812)
[»] chr3 (24 HSPs)
chr3 (202-365)||(46006049-46006206)
chr3 (203-287)||(33831984-33832068)
chr3 (203-397)||(36902262-36902451)
chr3 (312-401)||(36619260-36619348)
chr3 (203-307)||(26085063-26085167)
chr3 (202-258)||(30595154-30595210)
chr3 (203-258)||(19900204-19900259)
chr3 (203-258)||(47075620-47075675)
chr3 (231-377)||(35539614-35539755)
chr3 (169-254)||(55272770-55272855)
chr3 (203-405)||(41211980-41212175)
chr3 (331-397)||(26085177-26085242)
chr3 (206-405)||(46048882-46049078)
chr3 (331-405)||(52744650-52744724)
chr3 (203-288)||(54422721-54422805)
chr3 (314-402)||(40242118-40242206)
chr3 (318-410)||(55222597-55222689)
chr3 (219-364)||(13755124-13755262)
chr3 (219-364)||(13768525-13768663)
chr3 (202-284)||(52995699-52995781)
chr3 (203-256)||(3993568-3993620)
chr3 (206-287)||(45603479-45603563)
chr3 (202-258)||(36277835-36277894)
chr3 (203-248)||(41211731-41211776)
[»] scaffold0036 (1 HSPs)
scaffold0036 (158-287)||(2116-2242)
[»] scaffold0991 (1 HSPs)
scaffold0991 (203-287)||(2927-3011)
[»] scaffold0712 (1 HSPs)
scaffold0712 (203-260)||(6131-6188)
[»] scaffold0709 (1 HSPs)
scaffold0709 (203-260)||(6149-6206)
[»] scaffold0017 (1 HSPs)
scaffold0017 (202-356)||(31782-31930)
[»] scaffold0040 (2 HSPs)
scaffold0040 (331-413)||(55702-55782)
scaffold0040 (315-359)||(59703-59747)


Alignment Details
Target: chr8 (Bit Score: 179; Significance: 2e-96; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 163 - 413
Target Start/End: Complemental strand, 37673929 - 37673679
Alignment:
Q  163 tcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagat 262  Q
    |||||||||||||| |||||||||||||| | |||  |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| | |    
T  37673929 tcttatttaagacccccaactttaagcggggtccatacgcttttaatattaaaaaattagaatgtagtgatataaaattattgatagttgattagtgggt 37673830  T
Q  263 ccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcg 362  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||    
T  37673829 ccaatttaagaactttgtgtgagatctggattggagggattaagttaagtacttattaggtactactattaaaaaattataaatgagtgatgtgtacgcg 37673730  T
Q  363 tgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
    ||||||| ||||||| | ||||||||||||||||||||||||| |||||||    
T  37673729 tgacacatatttaagaacccaaaaatggatgtctccattgtggatgctcta 37673679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 163 - 346
Target Start/End: Complemental strand, 2603240 - 2603062
Alignment:
Q  163 tcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagat 262  Q
    |||||||||||||| | |||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  2603240 tcttatttaagaccccaaactttaagcggggtccgcacgcttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtggat 2603141  T
Q  263 ccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaat 346  Q
    |  |||||||||||||||||||||| |||||||||||||     || ||||||||||||||| | || ||||||||||||||||    
T  2603140 ctcatttaagaactttgtgtgagatctggattggaggga-----ttgagtacttattagatactactattaaaaaattataaat 2603062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 168 - 410
Target Start/End: Complemental strand, 31226632 - 31226395
Alignment:
Q  168 tttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaat 267  Q
    |||||||||||||  |||||||||   || | | |||||||||||||||||||||||| || |||||||||||||||||||||||| |||| | ||| ||    
T  31226632 tttaagacctccacttttaagcgggacccgcactcttttaatattaaaaaattgaaatataatgatataaaattattgatagttgagtagtgggtcccat 31226533  T
Q  268 ttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgaca 367  Q
    |||||||||||||||||||| | | |||||| |      || |||| ||||||| || | || |||||||||||||||||||||||||||||  ||||||    
T  31226532 ttaagaactttgtgtgagatctaggttggagtg-----tttgagtatttattaggtactactattaaaaaattataaatgagtgatgtgtacatgtgaca 31226438  T
Q  368 cacatttaagtaaccaaaaatggatgtctccattgtggttgct 410  Q
    | |||||||| | |||||||||| ||| |||||||||| ||||    
T  31226437 cccatttaagaacccaaaaatgggtgtttccattgtggatgct 31226395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 161 - 377
Target Start/End: Original strand, 35468287 - 35468497
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||||| |||||||||||||| |  | | ||||||||||||||||||||| ||||||||||  ||||| |||||||||||| ||||||      
T  35468287 ggtcttatttaagaccaccaactttaagcggggctcgcacgcttttaatattaaaaaattcaaatgtagtggcataaagttattgatagttaattagtga 35468386  T
Q  261 atccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacg 360  Q
     ||  |||||||||||||| |||||||  |  |||||||||     || |||||||||||  || |||| || |||||||||||||||||||||||||||    
T  35468387 gtctcatttaagaactttgagtgagatcagtgttggaggga-----ttgagtacttattaagtactgctatt-aaaaattataaatgagtgatgtgtacg 35468480  T
Q  361 cgtgacacacatttaag 377  Q
    ||||| || ||||||||    
T  35468481 cgtgagacccatttaag 35468497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 203 - 413
Target Start/End: Complemental strand, 13629165 - 13628959
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatat-ggattggaggga 301  Q
    |||||||||||||||||||| ||||| || |||||| ||||||||||||||||  | ||||| ||||||||| ||||| |||||| | || |||||||||    
T  13629165 ttttaatattaaaaaattgatatgtaatggtataaagttattgatagttgatttctggatcctatttaagaattttgtatgagatgttgggttggaggga 13629066  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
    || | |     |||||||||||| | || |||||||||||||||||| ||||||||||  |||| || |||||||| |  |||||||||| |||||||||    
T  13629065 ttgact-----acttattagatactactattaaaaaattataaatgaatgatgtgtacatgtgagacccatttaagaactcaaaaatggaggtctccatt 13628971  T
Q  402 gtggttgctcta 413  Q
    |||| |||||||    
T  13628970 gtggatgctcta 13628959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 203 - 413
Target Start/End: Complemental strand, 13729577 - 13729371
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatat-ggattggaggga 301  Q
    |||||||||||||||||||| ||||| || |||||| ||||||||||||||||  | ||||| ||||||||| ||||| |||||| | || |||||||||    
T  13729577 ttttaatattaaaaaattgatatgtaatggtataaagttattgatagttgatttctggatcctatttaagaattttgtatgagatgttgggttggaggga 13729478  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
    || | |     |||||||||||| | || |||||||||||||||||| ||||||||||  |||| || |||||||| |  |||||||||| |||||||||    
T  13729477 ttgact-----acttattagatactactattaaaaaattataaatgaatgatgtgtacatgtgagacccatttaagaactcaaaaatggaggtctccatt 13729383  T
Q  402 gtggttgctcta 413  Q
    |||| |||||||    
T  13729382 gtggatgctcta 13729371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 160 - 413
Target Start/End: Complemental strand, 1155311 - 1155059
Alignment:
Q  160 aggtcttatttaagacctccaactttaagcggagac-cacgcgcttttaatattaaaaaattgaaatgtagt----gatataaaattattgatagttgat 254  Q
    |||||||| |||||||||||||  |||||||| ||| ||| | ||||||||||||||||||||||||||| |    |||||||| |||||| ||||||||    
T  1155311 aggtcttacttaagacctccaatcttaagcgg-gactcacactcttttaatattaaaaaattgaaatgtaattaatgatataaagttattggtagttgat 1155213  T
Q  255 tagtagatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatg 354  Q
    || ||  ||  ||||||||| |||||||||||| ||| |||||||||     || | | ||||||||||| | || ||||||||||||||||||||||||    
T  1155212 taatatgtctcatttaagaaatttgtgtgagatctgggttggaggga-----ttgaatgcttattagatactactattaaaaaattataaatgagtgatg 1155118  T
Q  355 tgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
    ||||| || |  |  |||||||| | | |||||| | |||||| ||||||| |||||||    
T  1155117 tgtacacgcgggatccatttaagaaccaaaaaattgttgtctcgattgtggatgctcta 1155059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 11777796 - 11777695
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||| ||  ||||||||| ||||||||| |||||||||| |||||    
T  11777796 cttttaatattaaaaagttgaaatgtaatgatataaagttattgatagttgattagtaggtctcatttaagaaatttgtgtgatatatggattgcaggga 11777697  T
Q  302 tt 303  Q
    ||    
T  11777696 tt 11777695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 202 - 412
Target Start/End: Complemental strand, 18806697 - 18806492
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| ||||| |||||| || |||||||||||| | | || ||| ||    
T  18806697 cttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatttaaaaaatttgtgtgagatctaggtttgagtga 18806598  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
    |  |   | ||  |||||||||| | || |||||||||||||||| |||||||||||| ||||| || |||||||  | |||||||||  ||||| ||||    
T  18806597 tcga---atgt--ttattagatactactattaaaaaattataaataagtgatgtgtacacgtgaaacccatttaaaaatccaaaaatgagtgtcttcatt 18806503  T
Q  402 gtggttgctct 412  Q
    || | ||||||    
T  18806502 gtagatgctct 18806492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 404
Target Start/End: Original strand, 23982199 - 23982441
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagta- 259  Q
    ||||||| ||||||||  ||  ||||||||| |||||| |  ||||||||||||||||||||||| || ||||||||| ||||||||||||| ||||||     
T  23982199 ggtcttacttaagaccctcacttttaagcgg-gaccacacttttttaatattaaaaaattgaaatataatgatataaagttattgatagttggttagtac 23982297  T
Q  260 ---gatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagata-gtgctgttaaaaaattataaatgagtgatgt 355  Q
       ||||| ||||||||||||||||| |||| ||| |||||| ||||  || |     ||||||  ||  |  | |||||||||||||||||||||||||    
T  23982298 gtggatcccatttaagaactttgtgtaagatctgggttggagtgattgggtca-----ttattaagtattttttattaaaaaattataaatgagtgatgt 23982392  T
Q  356 gtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtg 404  Q
    |||| ||||| |  |||||||| | |||||||| | |||||||||||||    
T  23982393 gtacacgtgaaaaccatttaagaacccaaaaataggtgtctccattgtg 23982441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 202 - 404
Target Start/End: Complemental strand, 5535922 - 5535725
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||||||||||| || ||||||||| ||||||| |||||||| || | | |  ||||||||||||||||||||| | | |||||| ||    
T  5535922 cttttaatattaaaaaattgaaatataatgatataaagttattgaaagttgatttgtgggttccgtttaagaactttgtgtgagatctaggttggagtga 5535823  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
         || ||| ||||| || || |  | ||||||||||||||||||||||||||||| ||||  |  |||||||  | ||||||||| |||||||||||    
T  5535822 -----ttgagtgcttataaggtactaatattaaaaaattataaatgagtgatgtgtacacgtggaattcatttaaaaacccaaaaatgaatgtctccatt 5535728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 287
Target Start/End: Complemental strand, 6427229 - 6427146
Alignment:
Q  204 tttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||| ||| |||||| || ||||||||||||    
T  6427229 tttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtcctatttaaaaaatttgtgtgagat 6427146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 377
Target Start/End: Complemental strand, 14426290 - 14426079
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||||| |||  |||||| ||   |||| | ||||||||||||||||||| ||||  | ||||||||||||||||||| |||| ||||      
T  14426290 ggtcttatttaagacccccacttttaagtgggatccacactcttttaatattaaaaaattaaaattaaatgatataaaattattgataattgagtagtga 14426191  T
Q  261 atccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacg 360  Q
     ||| |||||||||||||||||||||| ||  |||||| |||| |||   ||  ||||||| || |||  |||||||||||||||  ||||||||||||     
T  14426190 gtcccatttaagaactttgtgtgagatctgagttggagtgattgagt---gt--ttattaggtattgcaattaaaaaattataaagaagtgatgtgtaca 14426096  T
Q  361 cgtgacacacatttaag 377  Q
    ||||  || ||||||||    
T  14426095 cgtgtgacccatttaag 14426079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 9134146 - 9134231
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||   ||  ||||||||||||||||||||||    
T  9134146 cttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtgagtctcatttaagaactttgtgtgagat 9134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 374
Target Start/End: Complemental strand, 31128681 - 31128518
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggattaa 305  Q
    ||||||||| |||||||||| || ||||||||| |||||||||||| |||||||| ||  |||||||||||||||| ||||| | | || ||| ||        
T  31128681 taatattaacaaattgaaatataatgatataaagttattgatagtttattagtaggtctcatttaagaactttgtgagagatttaggttagagtga---- 31128586  T
Q  306 gttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacattt 374  Q
     || | | |||||||| || | || |||||||||||||||||||||||||||| |||||| || |||||    
T  31128585 -ttgaatgcttattaggtactactattaaaaaattataaatgagtgatgtgtatgcgtgagacccattt 31128518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 5139804 - 5139699
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt-agatccaatttaagaactttgtgtgagatatggattggaggg 300  Q
    ||||||||||||||||||  |||| || ||||||||||||||||||||||||||||| || | | |||||||| ||||||||||||| ||| |||||| |    
T  5139804 cttttaatattaaaaaatgaaaatataatgatataaaattattgatagttgattagtgagtttc-atttaagagctttgtgtgagatctgggttggagtg 5139706  T
Q  301 attaagt 307  Q
    |||||||    
T  5139705 attaagt 5139699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 406
Target Start/End: Complemental strand, 9604672 - 9604431
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||| | |||  |||||||||   || | | |||||||| ||||||||||||||| || ||||||||| ||||||||||||||||||| |    
T  9604672 ggtcttatttaagatccccatttttaagcgggatcctcactcttttaatgttaaaaaattgaaatctaatgatataaagttattgatagttgattagtgg 9604573  T
Q  261 atccaatttaagaactttgtgtgagat-atggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtac 359  Q
     | | ||||||||| ||| | ||||||  ||| ||||| ||||| ||||     ||||||||||| |  | |||||||||||||||| ||||||| |||     
T  9604572 gttccatttaagaaatttttatgagatgctgggttggatggattgagtt-----cttattagatactattattaaaaaattataaattagtgatgcgtag 9604478  T
Q  360 gcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggt 406  Q
     ||||| ||  ||||||| | | |||| || ||||||| ||||||||    
T  9604477 acgtgagacctatttaagaatctaaaactgaatgtctctattgtggt 9604431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 202 - 359
Target Start/End: Original strand, 23036789 - 23036942
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggg 300  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||     ||||||| ||||||||||||  ||| ||| || |    
T  23036789 cttttaatattaaaaaattgatatgtaatgatataaaattattgatagttgatcagtggatttctattaagaaatttgtgtgagatgctgggttgaagag 23036888  T
Q  301 attaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtac 359  Q
    ||| ||||     ||||||||||| | || || ||||||||||| ||||||||||||||    
T  23036889 attgagtt-----cttattagatactactattgaaaaattataattgagtgatgtgtac 23036942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 5978633 - 5978544
Alignment:
Q  214 aaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggatt 303  Q
    |||||||||||| || ||||||||| ||||||||||||||||||| | ||| ||||||||||||||||| |||| ||| |||||| ||||    
T  5978633 aaaaattgaaatataatgatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtcagatctgggttggagtgatt 5978544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 28540666 - 28540751
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||   ||   |||||||| ||||||||||||    
T  28540666 cttttaatattaaaaaattgaaatgtaatgatataaaactattgatagttgattagtgagtctcttttaagaaatttgtgtgagat 28540751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 35973514 - 35973409
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatgga-ttggaggga 301  Q
    |||||||||||||||||||| || || ||||||||  ||||||||| ||||||||||||||  ||||||||| | |||||||||||| || ||||| |||    
T  35973514 ttttaatattaaaaaattgatatataatgatataatgttattgataattgattagtagatctcatttaagaaatgtgtgtgagatattgagttggatgga 35973415  T
Q  302 ttaagt 307  Q
    ||||||    
T  35973414 ttaagt 35973409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 10954201 - 10954145
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  10954201 cttttaatattaaaaaattgaaatgtaatgatataaaataattgatagttgattagt 10954145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 10962206 - 10962150
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  10962206 cttttaatattaaaaaattgaaatgtaatgatataaaataattgatagttgattagt 10962150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 6519212 - 6519115
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    ||||||| |||||||||||   |||||||||   || | | |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  6519212 ggtcttacttaagacctccgcttttaagcgggatccgcactcttttagtattaaaaaattgaaatgtaatgatataaagttattgatagttgattagt 6519115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 412
Target Start/End: Original strand, 4326033 - 4326113
Alignment:
Q  332 taaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctct 412  Q
    |||||||||||||||||||||||||||| | ||| || |||||||||| |||||||| | |||||| ||||||| ||||||    
T  4326033 taaaaaattataaatgagtgatgtgtacacttgagacccatttaagtatccaaaaataggtgtctcaattgtggatgctct 4326113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 287
Target Start/End: Complemental strand, 16531697 - 16531613
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||||||||||||||||||| || ||||||||| ||||  ||||||||||||||||||   |||||||| ||||| ||||||    
T  16531697 ttttaatattaaaaaattgaaatataatgatataaagttatgaatagttgattagtagatctcttttaagaattttgtatgagat 16531613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 38937788 - 38937872
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||| | ||||  ||||||||| || ||||||||||||| || ||||| |||||| |||||||||||||||    
T  38937788 ttttaatattaaaaaattaatatgtgatgatataaagttgttgatagttgatttgtggatcctatttaaaaactttgtgtgagat 38937872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 287
Target Start/End: Complemental strand, 8673727 - 8673643
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||  ||||||||||||||||| || |||||| ||||||||| | || ||||||| || ||| ||||||||    
T  8673727 ttttaatattaaaaaatgaaaatgtagtgatataaagtttttgataattgattagtgggtcaaatttaaaaaatttatgtgagat 8673643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 28557241 - 28557297
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    ||||||||||||||||||||||||||| | |||||||| | ||||||||||||||||    
T  28557241 cttttaatattaaaaaattgaaatgtaataatataaaagtgttgatagttgattagt 28557297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 254
Target Start/End: Original strand, 36316758 - 36316808
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgat 254  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  36316758 ttttaatattaaaa-attgaaatgtaatgatataaaattattgatagttgat 36316808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 5569224 - 5569278
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattag 257  Q
    |||||||||||||||||| ||||||| ||||||||  ||||||||||||||||||    
T  5569224 ttttaatattaaaaaattcaaatgtaatgatataatgttattgatagttgattag 5569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 28575395 - 28575445
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttg 252  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  28575395 cttttaatattaaaaaattgaaatataatgatataaagttattgatagttg 28575445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 3628225 - 3628278
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    |||||||||||||||||||| ||||| ||||||||| |||||| ||||||||||    
T  3628225 ttttaatattaaaaaattgagatgtaatgatataaagttattgctagttgatta 3628278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 28567803 - 28567852
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttg 252  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  28567803 ttttaatattaaaaaattgaaatataatgatataaagttattgatagttg 28567852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 12734039 - 12734122
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| | ||  ||||||||| ||||||||||||    
T  12734039 ttttaatattaaaaaattaaaatgtaatgatataaagttgaggatagttgattagt-ggtctcatttaagaaatttgtgtgagat 12734122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 1737854 - 1737803
Alignment:
Q  205 ttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    ||||||| |||||||||||||||| | ||||||| |||||||||||||||||    
T  1737854 ttaatataaaaaaattgaaatgtaataatataaagttattgatagttgatta 1737803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 404
Target Start/End: Original strand, 36317096 - 36317163
Alignment:
Q  337 aattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtg 404  Q
    |||||||||| | |||||||||| ||||| || ||||||||||||||| |||| ||||||| ||||||    
T  36317096 aattataaataaatgatgtgtacacgtgagactcatttaagtaaccaacaatgaatgtctcaattgtg 36317163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 410
Target Start/End: Original strand, 7288228 - 7288421
Alignment:
Q  213 aaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggagggattaagttaag 311  Q
    |||||||| | || || ||||||||| |||| |||||||||||||||  ||  ||||||||| ||| | ||||||  ||| ||||||||||||||||       
T  7288228 aaaaaattaatatataatgatataaagttatcgatagttgattagtaagtctcatttaagaaatttctatgagatgctgggttggagggattaagtt--- 7288324  T
Q  312 tacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgct 410  Q
      ||||||||||| | || | ||| |||||||||| |||||| | ||  | ||| || ||||||||||   ||||| ||||||||| ||||||| ||||    
T  7288325 --cttattagatactactatgaaacaattataaataagtgatatctatacatgagactcatttaagtataaaaaaacggatgtctctattgtggatgct 7288421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 9135123 - 9135193
Alignment:
Q  334 aaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtg 404  Q
    ||||||| |||||||||||| ||||| ||||| || |||||||| | |||||||||  |||||||||||||    
T  9135123 aaaaattgtaaatgagtgatatgtacacgtgagacccatttaagaatccaaaaatgagtgtctccattgtg 9135193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 9133798 - 9133882
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||| ||||||||||| || |||||| || || ||| ||||||||||||   ||  ||||||||||||||||||||||    
T  9133798 cttttaatattagaaaattgaaatataatgatat-aagtttttggtagttgattagtgagtctcatttaagaactttgtgtgagat 9133882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 30462600 - 30462544
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    ||||||||||||||||| ||| ||||| || |||| ||||||| |||||||||||||    
T  30462600 cttttaatattaaaaaactgatatgtaatggtatataattattaatagttgattagt 30462544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 4797360 - 4797277
Alignment:
Q  205 ttaatattaaaaaattgaaatgtagtgata-taaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||| ||||||  ||||| |||| ||||||||||||||||| |   ||  ||||||||| ||||||||||||    
T  4797360 ttaatattaaaaaattaaaatgtgatgatattaaagttattgatagttgattaatgagtcacatttaagaaatttgtgtgagat 4797277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 45376739 - 45376787
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||| ||||||    ||||||||||||||||||||||||||    
T  45376739 taatattaaaaaattgtaatgta----tataaaattattgatagttgattagt 45376787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 28562305 - 28562354
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttg 252  Q
    ||||||||||||||||||||||| || | ||||||| |||||||| ||||    
T  28562305 ttttaatattaaaaaattgaaatataataatataaagttattgattgttg 28562354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 30714158 - 30714093
Alignment:
Q  222 aaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||| ||||||||| |||||||||||||||||||   ||| |||||  || ||||||||||||    
T  30714158 aaatgtaatgatataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagat 30714093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 30721935 - 30721870
Alignment:
Q  222 aaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||| ||||||||| |||||||||||||||||||   ||| |||||  || ||||||||||||    
T  30721935 aaatgtaatgatataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagat 30721870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 13983804 - 13984239
Alignment:
Q  1 aatataaaacataccaattgatcggttacttgaaactacttcaggtaag-----cacattt------ggaaaatgataacaaatgtcctaagaccatctt 89  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||      |||||||      ||||||| ||||||||||  |||||| |||||     
T  13983804 aatataaaacataccaattgatcggttacatgaaactacctcaggtaacataaccacatttaattaaggaaaattataacaaatgctctaagatcatctc 13983903  T
Q  90 caatgagacagttttgaacatttaagatctggtatttatgaggtacttctattggggtgaannnnnnncaaggtc-----------------ttatttaa 172  Q
    |||| ||| |||||||||||||||||||||| ||| ||| |||||||||||||| ||||||       |||||||                 ||||||||    
T  13983904 caataagagagttttgaacatttaagatctgatatctattaggtacttctattgaggtgaatttttttcaaggtcttataagacatggggtcttatttaa 13984003  T
Q  173 gacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaag 272  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||    
T  13984004 gacctccaactttaagcggagacaacacgcttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtaggtctcatttaag 13984103  T
Q  273 aactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacat 372  Q
    || |||||||||||| ||| || ||| ||     || ||||||||||||||| | || ||||||||||||||||| |||||||||| |||||  || |||    
T  13984104 aattttgtgtgagatctgggttagagaga-----ttgagtacttattagatactactattaaaaaattataaatgtgtgatgtgtatgcgtgggacccat 13984198  T
Q  373 ttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
    ||||| |   ||||||||||||||||||||||| |||||||    
T  13984199 ttaagaacttaaaaatggatgtctccattgtggatgctcta 13984239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 161 - 413
Target Start/End: Original strand, 43822731 - 43822977
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagacc-acgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagta 259  Q
    |||||||||||||||| |||||||||| ||| |||| || | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  43822731 ggtcttatttaagacc-ccaactttaaacgg-gacctacactcttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtg 43822828  T
Q  260 gatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtac 359  Q
    | ||| |||||||||||||||||||||| ||| |||||||     | || ||| ||||||||||| | || |||||||||||||||||||||||||||||    
T  43822829 ggtcccatttaagaactttgtgtgagatctgggttggagg-----aattgagtgcttattagatactactattaaaaaattataaatgagtgatgtgtac 43822923  T
Q  360 gcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
    |||||  || |||||||| | | |||||||| | |||||||||||| |||||||    
T  43822924 gcgtgggacccatttaagaaccaaaaaatgggtatctccattgtggatgctcta 43822977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 161 - 401
Target Start/End: Original strand, 25813691 - 25813925
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||||| |||||||||||||| |    |  ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |    
T  25813691 ggtcttatttaagacccccaactttaagcggggcttgcaggcttttaatattaaaaattt-aaatgtagtgatataaaattattgatagttgattagtgg 25813789  T
Q  261 atccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacg 360  Q
     ||  |||||||||||||| ||||||| ||| |||||||||        |||||||||||  || | || ||||||||||||||||||||||||||||||    
T  25813790 gtctcatttaagaactttgcgtgagatctgggttggaggga-----ccgagtacttattatgtacttctattaaaaaattataaatgagtgatgtgtacg 25813884  T
Q  361 cgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
    ||||  ||  ||||||| | |||||||||||||||||||||    
T  25813885 cgtgggacctatttaagaacccaaaaatggatgtctccatt 25813925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 203 - 413
Target Start/End: Complemental strand, 52353916 - 52353711
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | | | ||||||||| ||||||||||||   | |||||||||     
T  52353916 ttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggttctatttaagaaatttgtgtgagatgctgcttggaggga- 52353818  T
Q  303 taagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattg 402  Q
        |  ||| |||||||| || |||| |||||||||||||||| |||||||||||| ||||  || |||||||||| || ||||||  ||||| |||||    
T  52353817 ----tcgagtgcttattaggtactgctattaaaaaattataaattagtgatgtgtacacgtgggacccatttaagtaccctaaaatgtgtgtcttcattg 52353722  T
Q  403 tggttgctcta 413  Q
    ||| |||||||    
T  52353721 tggatgctcta 52353711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 202 - 405
Target Start/End: Complemental strand, 32851888 - 32851695
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||| ||| ||||| |||  ||||||      
T  32851888 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtgtgtcccatttaagaacttcgtgggagatctgggatggagg-- 32851791  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaacc-aaaaatggatgtctccat 400  Q
       | || | | ||||||||||| | || |||||||||| |||||||||||||||||||||||| || |      |||||| ||||||||||||||||||    
T  32851790 ---aattgattgcttattagatactactattaaaaaattgtaaatgagtgatgtgtacgcgtgagactc------gtaaccaaaaaatggatgtctccat 32851700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 36166846 - 36166969
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||||| |||||||||||||| | || | |||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||||      
T  36166846 ggtcttatttaagacccccaactttaagcggggcccgcacgcttttaatatgaaaaaattaaaatgtagtgatataaagttattgatagtttattagtga 36166945  T
Q  261 atccaatttaagaactttgtgtga 284  Q
     ||||||||||||| |||||||||    
T  36166946 gtccaatttaagaattttgtgtga 36166969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 413
Target Start/End: Original strand, 42831640 - 42831847
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggg 300  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | ||||  ||||||||| ||| ||||||||  | | |||||||     
T  42831640 cttttaatattaaaaaattaaaatgtaatgatataaaattattgatagttgattaatggatctcatttaagaaatttttgtgagatgctaggttggagga 42831739  T
Q  301 attaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccat 400  Q
    ||| ||||     |||||||| || | || |||||||||||||||||||| || |||||  |||| |  |||| ||||  | ||||||||||||||||||    
T  42831740 atttagtt-----cttattaggtactactattaaaaaattataaatgagtaatatgtacatgtgagatccattcaagtgccaaaaaatggatgtctccat 42831834  T
Q  401 tgtggttgctcta 413  Q
    ||||  |||||||    
T  42831835 tgtgagtgctcta 42831847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 161 - 377
Target Start/End: Complemental strand, 47783823 - 47783612
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagac-cacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagta 259  Q
    ||||||| |||||||| |||  ||||||||| ||| ||| | || ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||    
T  47783823 ggtcttacttaagacccccacttttaagcgg-gactcacactctattaatattaaaaaattgaaatataatgatataaaattattgatagttgattaata 47783725  T
Q  260 gatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtac 359  Q
    | | | |||||||||||||||||||||| ||  |||||| |||| |||   ||  |||||| ||| |  | |||||||||||||||  | ||||||||||    
T  47783724 ggttccatttaagaactttgtgtgagatttgagttggagtgattgagt---gt--ttattaaatactattattaaaaaattataaacaaatgatgtgtac 47783630  T
Q  360 gcgtgacacacatttaag 377  Q
     ||||| || ||||||||    
T  47783629 acgtgagacccatttaag 47783612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 412
Target Start/End: Original strand, 27544326 - 27544572
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||||| ||||  ||||| ||   |||| | |||||||||||||||| |||||||||| |||  |||| ||| ||||| ||| ||| | |    
T  27544326 ggtcttatttaagacccccaatcttaagtgggacccacactcttttaatattaaaaagttgaaatgtaatgacttaaagttagtgataattgtttaatgg 27544425  T
Q  261 atccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacg 360  Q
     ||  ||||||||||| ||||| |||| ||| ||||||||||| |||      ||||||||||  |  | |||||||||||||||||||||||||||||     
T  27544426 gtctcatttaagaactgtgtgtcagatctgggttggagggattgagtg-----cttattagatgctattattaaaaaattataaatgagtgatgtgtaca 27544520  T
Q  361 cgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctct 412  Q
    | ||| || |||||||||| | |||||| |  ||||||||||||| ||||||    
T  27544521 catgagacccatttaagtaccaaaaaattggcgtctccattgtggatgctct 27544572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 162 - 303
Target Start/End: Complemental strand, 40287154 - 40287015
Alignment:
Q  162 gtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtaga 261  Q
    |||||| ||||||||  |||||||||||||   |||| |  |||||||||||||||||| ||||||| |||||  |||||||||||||||||||||  |     
T  40287154 gtcttacttaagacccacaactttaagcgggacccacacctttttaatattaaaaaattaaaatgtaatgata--aaattattgatagttgattagcggg 40287057  T
Q  262 tccaatttaagaactttgtgtgagatatggattggagggatt 303  Q
    ||| |||||| ||||||||||||||| ||| |||||||||||    
T  40287056 tcccatttaataactttgtgtgagatctgggttggagggatt 40287015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 396
Target Start/End: Original strand, 11120549 - 11120736
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    ||||||||||||||| || |||| || ||||||||| ||||||||||||||||||| |||   |||||||||||||||||||||| ||  ||||||        
T  11120549 ttttaatattaaaaa-ttaaaatataatgatataaagttattgatagttgattagtggattgtatttaagaactttgtgtgagatctgcgttggag---- 11120643  T
Q  303 taagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtct 396  Q
    ||| || |||  |||||||||| | || ||||| ||||||||||||||||||||||  ||||  |  |||||||  | ||||||||||||||||    
T  11120644 taa-ttgagtgtttattagatactactattaaagaattataaatgagtgatgtgtatacgtggtatccatttaaaaacccaaaaatggatgtct 11120736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 377
Target Start/End: Complemental strand, 51504662 - 51504491
Alignment:
Q  203 ttttaatattaaaaaattgaaa-tgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggg 300  Q
    |||||||||||||||||||||| ||| |||||||||||||||| ||||||||| ||| | ||| |||||||||  ||||||| ||| |||| |||||||     
T  51504662 ttttaatattaaaaaattgaaaatgttgtgatataaaattattaatagttgataagtgggtcctatttaagaaacttgtgtgggatgatgggttggagg- 51504564  T
Q  301 attaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaag 377  Q
        | || |||||||| ||  || | || ||||||||||||||||||||||||| ||| ||||| || ||||||||    
T  51504563 ----aattgagtacttaatacgtactactattaaaaaattataaatgagtgatgtatacacgtgagacccatttaag 51504491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 36297979 - 36298034
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36297979 ttttaatattaaaaaattgaaatgtaatgatataaaattattgatagttgattagt 36298034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 44665445 - 44665343
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagata-tggattggaggg 300  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||  ||   ||||||||  ||||| ||||||| |||||||||| |    
T  44665445 cttttaatattaaaaaattgaaatataatgatataaaattattgatagttgattagtgtatttcatttaagagatttgtatgagatactggattggagcg 44665346  T
Q  301 att 303  Q
    |||    
T  44665345 att 44665343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 412
Target Start/End: Original strand, 38902066 - 38902164
Alignment:
Q  314 cttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctct 412  Q
    |||||||| || | || ||||||||||||||||||||||| ||||| ||||| || |||||||| | |||||||||  |||||||||||||| ||||||    
T  38902066 cttattaggtactactattaaaaaattataaatgagtgatatgtacacgtgagacccatttaagaacccaaaaatgagtgtctccattgtgggtgctct 38902164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 299
Target Start/End: Complemental strand, 11241607 - 11241510
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgaga-tatggattggagg 299  Q
    ||||||||||| ||||||||||| || ||||||||| ||||||||||||||||||| ||| |  ||||| || ||||||||| | |||||||||||||    
T  11241607 ttttaatattataaaattgaaatataatgatataaagttattgatagttgattagtggataccttttaaaaaatttgtgtgaaattatggattggagg 11241510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 11570046 - 11569992
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  11570046 ctttttatattaaaaaattgaaatgtaatgatataaagttattgatagttgatta 11569992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 412
Target Start/End: Complemental strand, 49003492 - 49003288
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggga 301  Q
    |||||||||||||||||||  ||||| |  |||||| |||||||||||||||| || | || |||||||||| ||||||||||||  | | |||||| ||    
T  49003492 ttttaatattaaaaaattgttatgtaattgtataaagttattgatagttgatttgtgggtctaatttaagaattttgtgtgagatgctcggttggagaga 49003393  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
         || | |||||||||| || | || ||||||||||||||| |||| ||||||||  |||| ||  |||||| ||  |||||||||| |||||||||    
T  49003392 -----ttgaatacttattaggtattactattaaaaaattataaa-gagtaatgtgtacatgtgagacctatttaaatattcaaaaatggaggtctccatt 49003299  T
Q  402 gtggttgctct 412  Q
     ||| ||||||    
T  49003298 atggatgctct 49003288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 22680376 - 22680480
Alignment:
Q  204 tttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatgga-ttggagggat 302  Q
    ||||||||||||||| | ||||||| |||||||||||||||| ||| ||||||   | |||  ||| |||| |||||||||||||| || ||||||||||    
T  22680376 tttaatattaaaaaaatcaaatgtaatgatataaaattattggtagatgattaacggttcccgtttcagaaatttgtgtgagatattgagttggagggat 22680475  T
Q  303 taagt 307  Q
    |||||    
T  22680476 taagt 22680480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 303
Target Start/End: Original strand, 23333756 - 23333856
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    ||||||||||||||||||||||| || | ||||||| ||||||||| ||||| |||   ||  ||||||||||| |||||||||| ||| |||||| |||    
T  23333756 ttttaatattaaaaaattgaaatataataatataaagttattgatatttgatcagtgagtctcatttaagaactgtgtgtgagatctgggttggagtgat 23333855  T
Q  303 t 303  Q
    |    
T  23333856 t 23333856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 31133220 - 31133165
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    ||||||||||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  31133220 ttttaatattaaataatttaaatgtaatgatatgaaattattgatagttgattagt 31133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 33041440 - 33041495
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||    
T  33041440 ttttaatattaaaatattgatatgtaatgatataaaattattgatagttaattagt 33041495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 51061749 - 51061670
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgt 282  Q
    |||||| ||||||||||||||||||| ||||| ||| ||||||||||| ||||||  | ||| ||||||||| |||||||    
T  51061749 ttttaaaattaaaaaattgaaatgtaatgatagaaagttattgatagtagattagcgggtcccatttaagaaatttgtgt 51061670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 11567008 - 11566954
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    ||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  11567008 ctttttatattaaaaaaatgaaatgtaatgatataaagttattgatagttgatta 11566954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 405
Target Start/End: Original strand, 47364418 - 47364515
Alignment:
Q  307 ttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtgg 405  Q
    ||||||| |||||| ||| | || || ||||||||||||||||| ||||| || ||||| || |||||||||| | |||||||||||||||| ||||||    
T  47364418 ttaagtatttattatatactactatttaaaaattataaatgagtaatgtgaacacgtgagac-catttaagtatctaaaaatggatgtctccgttgtgg 47364515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 9505611 - 9505554
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||||||| | ||||| | ||||||| |||||||||||||||||||||    
T  9505611 ttttaatattaaaaaatttatatgtaataatataaagttattgatagttgattagtag 9505554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 51263186 - 51263241
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||| |||| || ||| ||||| |||||||||||||||||||    
T  51263186 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 51263241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 405
Target Start/End: Complemental strand, 35604555 - 35604481
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtgg 405  Q
    |||| |||||||||| |||||||||||||  |||| || | |||||||| |||||||| |||||||||| |||||    
T  35604555 ttaacaaattataaacgagtgatgtgtacaagtgagactcgtttaagtatccaaaaatagatgtctccaatgtgg 35604481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 38118996 - 38118942
Alignment:
Q  203 ttttaatattaaaaaat-tgaaatgtagtgatataaaattattgatagttgatta 256  Q
    ||||||||||||||||  ||||||||| | |||||||||||||||||||||||||    
T  38118996 ttttaatattaaaaaacctgaaatgtaataatataaaattattgatagttgatta 38118942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 43506265 - 43506335
Alignment:
Q  214 aaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtga 284  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||   || ||||||| || |||||||||    
T  43506265 aaaaattgaaatgtaataatataaagttattgatagttgattagtgagtcaaatttaataaatttgtgtga 43506335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 641883 - 641831
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    ||||||||||||||| |||| ||||| ||||||||| |||||||||||||||||    
T  641883 ttttaatattaaaaa-ttgatatgtaatgatataaagttattgatagttgatta 641831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 24555913 - 24555864
Alignment:
Q  202 cttttaatattaaaaaa-ttgaaatgtagtgatataaaattattgatagt 250  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  24555913 cttttaatattaaaaaaattgaaatataatgatataaaattattgatagt 24555864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 28278102 - 28278157
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    ||||||||||||||| |||||||| | || ||||||||||||  ||||||||||||    
T  28278102 ttttaatattaaaaatttgaaatgcaatgctataaaattattattagttgattagt 28278157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 11449221 - 11449270
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    ||||||||||||||||||||||| ||||||||| || || |||||||||||    
T  11449221 taatattaaaaaattgaaatgtaatgatataaagtt-tttatagttgatta 11449270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 38902002 - 38902051
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagtt 251  Q
    ||||||||||||||||||| |||| || ||||||||| ||||| ||||||    
T  38902002 cttttaatattaaaaaattaaaatataatgatataaagttattaatagtt 38902051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 46591531 - 46591584
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    ||||||| ||||||||||||||| || | ||||||||||||| |||||| ||||    
T  46591531 ttttaatgttaaaaaattgaaatttaattatataaaattattaatagttaatta 46591584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 396
Target Start/End: Original strand, 9244597 - 9244665
Alignment:
Q  328 ctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtct 396  Q
    ||||||||||||||||||||| ||||||||||   ||| ||  |||||| ||||||| ||| |||||||    
T  9244597 ctgttaaaaaattataaatgaatgatgtgtacatatgaaacctatttaaataaccaagaattgatgtct 9244665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 33326234 - 33326186
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagta 379  Q
    |||||||||||||||||||||||||| || ||||  || ||||||||||    
T  33326234 ttaaaaaattataaatgagtgatgtgcacacgtgtgactcatttaagta 33326186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 43675199 - 43675171
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtac 359  Q
    |||||||||||||||||||||||||||||    
T  43675199 ttaaaaaattataaatgagtgatgtgtac 43675171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 202 - 403
Target Start/End: Complemental strand, 32977501 - 32977304
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| | ||| |||||||||||||||||||||| ||| |||||||||    
T  32977501 cttttaatgttaaaaaattgaaatgtagtggtataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatctgggttggaggga 32977402  T
Q  302 ttaagttaagtacttattagatagtgctgtt-aaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccat 400  Q
         || ||| |||||||| || | || || ||||||| ||||||||||||||||||||||||  || |||||||||| |||||||||| |||||||||    
T  32977401 -----ttgagtgcttattaggtactactattaaaaaaatcataaatgagtgatgtgtacgcgtgggacccatttaagtacccaaaaatgggtgtctccat 32977307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 202 - 412
Target Start/End: Complemental strand, 32658554 - 32658349
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    ||||||||||||||||||| |||| || ||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||||||| |||||| ||    
T  32658554 cttttaatattaaaaaattaaaatatactgatataaagttattgatagttgattagtggattccatttaagaactttgtgtgagatatgggttggagtga 32658455  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
    || |||   ||  ||||||| || | || ||||||||||||||||||||||||||| | ||||| || |||||||| | | |||||||  |||||||| |    
T  32658454 tttagt---gt--ttattaggtactactattaaaaaattataaatgagtgatgtgtccacgtgagacccatttaagaacctaaaaatgagtgtctccact 32658360  T
Q  402 gtggttgctct 412  Q
    |||| ||||||    
T  32658359 gtggatgctct 32658349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 163 - 303
Target Start/End: Complemental strand, 21941099 - 21940959
Alignment:
Q  163 tcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagat 262  Q
    |||||||||||||||||||||||||||||   ||  || |||||||||||||||||||||||| |||| | ||||| |||||||||||| |||||| |      
T  21941099 tcttatttaagacctccaactttaagcgggacccgtgctcttttaatattaaaaaattgaaatatagtaacataaagttattgatagtttattagtggga 21941000  T
Q  263 ccaatttaagaactttgtgtgagatatggattggagggatt 303  Q
    || ||||||||  |||||||||||||||| |||||||||||    
T  21940999 cccatttaagacttttgtgtgagatatgggttggagggatt 21940959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 405
Target Start/End: Complemental strand, 5002499 - 5002299
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    ||||||||||| |||||||||||| || | ||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||| | | |||||| ||    
T  5002499 cttttaatatttaaaaattgaaatataataatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatctcggttggagtga 5002400  T
Q  302 ttaagttaagtacttattagatagtgct--gttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctcca 399  Q
         || ||| ||||||||||| | ||     |||||||||||||| |||||||||||| ||| | || |||||||  | |||||||||||||||||||    
T  5002399 -----ttgagtgcttattagatactactacaaaaaaaaattataaataagtgatgtgtacacgtaagacccatttaaaaacccaaaaatggatgtctcca 5002305  T
Q  400 ttgtgg 405  Q
    ||||||    
T  5002304 ttgtgg 5002299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 203 - 358
Target Start/End: Complemental strand, 7694051 - 7693900
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgaga-tatggattggaggga 301  Q
    |||||||||||||||||||||||||| |||||| || ||||||||||||||||||| | | | |||||| || ||||||||||| ||||| |||||||||    
T  7694051 ttttaatattaaaaaattgaaatgtattgatatgaagttattgatagttgattagtgggttccatttaaaaaatttgtgtgagattatgggttggaggga 7693952  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgta 358  Q
         || |||||||||||| || |  |  |||||||||||||||||||||||||||    
T  7693951 -----ttgagtacttattaggtactattactaaaaaattataaatgagtgatgtgta 7693900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 22281896 - 22281811
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||| ||||||||||||||| || ||||||||| |||||||| ||||||||||  |||| |||||||||||||||| |||||    
T  22281896 cttttaatgttaaaaaattgaaatataatgatataaagttattgatggttgattagtgaatcccatttaagaactttgtgggagat 22281811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 203 - 287
Target Start/End: Complemental strand, 18804304 - 18804220
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||  | | ||||| ||| ||||||||||||    
T  18804304 ttttaatattaataaattgaaatgtaataatataaaattattgatagttgattagtaagttccatttatgaaatttgtgtgagat 18804220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 25099074 - 25099129
Alignment:
Q  204 tttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagta 259  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  25099074 tttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagta 25099129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 6988171 - 6988229
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||    
T  6988171 cttttaatattaaaaaattaaaatgtgatgatataaaattattgatagttgtttagtag 6988229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 404
Target Start/End: Original strand, 33755768 - 33755932
Alignment:
Q  235 taaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaa 334  Q
    |||| ||||||||||||||||||| |||   ||||||||| |||||||||||| ||  |||||| |||| | |     ||||||||| || | || ||||    
T  33755768 taaagttattgatagttgattagtggatttcatttaagaattttgtgtgagatttgtgttggagtgattgaat-----acttattaggtactactattaa 33755862  T
Q  335 aaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaa-aatggatgtctccattgtg 404  Q
    ||||| |||||| ||| |||| ||| | ||| || |||||||| ||||||| |||||||||||||||||||    
T  33755863 aaaataataaataagtaatgtatacacttgagacccatttaag-aaccaaagaatggatgtctccattgtg 33755932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 9491883 - 9491836
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagt 250  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  9491883 ttttaatattaaaaaattaaaatgtaatgatataaagttattgatagt 9491836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 399
Target Start/End: Original strand, 387724 - 387913
Alignment:
Q  207 aatattaaaaaattgaaa-tgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggattaa 305  Q
    |||||||||||||| ||| | || | ||||||| ||||||||||||||||||| | ||  ||||||||| ||||||||| ||     |||||  || | |    
T  387724 aatattaaaaaattaaaaatataataatataaagttattgatagttgattagtgggtcttatttaagaaatttgtgtgaaat----gttggattgaatga 387819  T
Q  306 gttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctcca 399  Q
     || ||| | ||| ||||| | || |||||||||||||||||||| ||||||||  |||  || |||||||| | |||||| | ||||||||||    
T  387820 attgagtgcctatcagatactactattaaaaaattataaatgagttatgtgtacatgtgggactcatttaagcacccaaaattagatgtctcca 387913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 7879600 - 7879548
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgat 254  Q
    ||||||||||| | |||||||||||||||||||| || ||||| |||||||||    
T  7879600 cttttaatattgacaaattgaaatgtagtgatatgaatttattaatagttgat 7879548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 365
Target Start/End: Original strand, 3543259 - 3543353
Alignment:
Q  267 tttaagaactttgtgtgagat-atggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtga 365  Q
    |||||||| ||||||||||||  || ||||||||||     |||||||||| ||||||| | || ||||||| |||||||||||| |||||||| |||||    
T  3543259 tttaagaaatttgtgtgagatgctgaattggaggga-----ttaagtacttgttagataatactattaaaaatttataaatgagtaatgtgtacacgtga 3543353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 7879219 - 7879164
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||| |||||||||||| |||||||||  | ||||| |||||||||||||    
T  7879219 ttttaatattgaaaaattgaaatatagtgatatttatttattaatagttgattagt 7879164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 7884271 - 7884216
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||| |||||||||||| |||||||||  | ||||| |||||||||||||    
T  7884271 ttttaatattgaaaaattgaaatatagtgatatttatttattaatagttgattagt 7884216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 10078283 - 10078321
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaatt 241  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  10078283 ttttaatattaaaaatttgaaatgtaatgatataaaatt 10078321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 1947084 - 1947019
Alignment:
Q  222 aaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||| ||||||||||||| ||||| ||||||| | ||||| | ||||||| ||||| ||||||    
T  1947084 aaatgtaatgatataaaattaatgataattgattaatggatcctacttaagaaatttgtatgagat 1947019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 6321739 - 6321768
Alignment:
Q  329 tgttaaaaaattataaatgagtgatgtgta 358  Q
    ||||||||||||||||||||||||||||||    
T  6321739 tgttaaaaaattataaatgagtgatgtgta 6321768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 24848402 - 24848439
Alignment:
Q  208 atattaaaaaattgaaatgtagtgatataaaattattg 245  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  24848402 atattaaaaaattgaaatgtaataatataaaattattg 24848439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 31103498 - 31103446
Alignment:
Q  205 ttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||| || || ||||||||||||||| |||||| ||||||    
T  31103498 ttaatattaaaaaattgatat-taatgatataaaattatttatagttaattagt 31103446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 9491702 - 9491642
Alignment:
Q  240 ttattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggagg 299  Q
    ||||||||||||||||||||  ||| ||||| ||| |||||||||||| |||| |||||||    
T  9491702 ttattgatagttgattagtatgtcccatttatgaaatttgtgtgagatgatgggttggagg 9491642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 161 - 412
Target Start/End: Complemental strand, 14773094 - 14772849
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    ||||||||||||||||  ||||||||||||| | |  | || |||||||||||||||||||||||| |||| |||||| ||||||||||||||||| |      
T  14773094 ggtcttatttaagaccctcaactttaagcggggcctgcacgtttttaatattaaaaaattgaaatgcagtg-tataaagttattgatagttgattaatga 14772996  T
Q  261 atccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacg 360  Q
     ||| |||||||||||||||||||||| ||  |||||||     | || |||||||||||| || |  |||||||||||||||||||| |||||||||||    
T  14772995 gtcccatttaagaactttgtgtgagatctgtgttggagg-----aattgagtacttattaggtactattgttaaaaaattataaatgaatgatgtgtacg 14772901  T
Q  361 cgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctct 412  Q
    ||||| || |||||||| |  ||||||||| |||||||||||| | ||||||    
T  14772900 cgtgagacccatttaagaactcaaaaatgggtgtctccattgtagatgctct 14772849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 161 - 412
Target Start/End: Original strand, 11921898 - 11922144
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagac-cacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagta 259  Q
    ||||||| |||||||| ||||  |||||||| ||| ||| | |||||||||||||||||||  ||| || ||||||||| |||||| |||||||||||||    
T  11921898 ggtcttacttaagacccccaatcttaagcgg-gactcacacacttttaatattaaaaaattagaatctaatgatataaagttattggtagttgattagta 11921996  T
Q  260 gatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtac 359  Q
    | ||| ||||||||| |||||||||||| ||| |||||||     | || ||| ||| |||| || | || |||||||||||||||||||| ||||||||    
T  11921997 ggtcccatttaagaaatttgtgtgagatttgggttggagg-----aattgagtgctttttaggtactactattaaaaaattataaatgagtaatgtgtac 11922091  T
Q  360 gcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctct 412  Q
     ||||| || |||||||||||  |||||||  |||||||||||||| ||||||    
T  11922092 acgtgagacccatttaagtaattaaaaatgagtgtctccattgtggatgctct 11922144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 213 - 403
Target Start/End: Complemental strand, 6710989 - 6710804
Alignment:
Q  213 aaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggattaagttaagt 312  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||||| | | |||||| || | |||         
T  6710989 aaaaaattaaaatgtaatgatataaagttattgatagttgattaattgattctatttaagaactttgtgtgagatctaggttggagtgactgagtg---- 6710894  T
Q  313 acttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgt 403  Q
     ||||||||||| | || ||||||||||||||||||||||| ||||| ||||| || |||||||  | |||||||||||||||||||||||    
T  6710893 -cttattagatactactattaaaaaattataaatgagtgatctgtacacgtgagacccatttaaaaatccaaaaatggatgtctccattgt 6710804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 162 - 284
Target Start/End: Original strand, 26297070 - 26297192
Alignment:
Q  162 gtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtaga 261  Q
    ||||||||||| |||||||||||||||||| | |||| | | |||||||||||||||||||||||| |||||||||| |||||||||||||||||   ||    
T  26297070 gtcttatttaacacctccaactttaagcggggcccacacacatttaatattaaaaaattgaaatgtggtgatataaagttattgatagttgattatcgga 26297169  T
Q  262 tccaatttaagaactttgtgtga 284  Q
    ||| ||||||||||||| |||||    
T  26297170 tcccatttaagaactttatgtga 26297192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 202 - 413
Target Start/End: Original strand, 9583137 - 9583343
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    ||||||||  |||||||||||||| || |||| |||| ||||||| | ||||||||| | |||||||||||||||||||||||||| ||  || ||| ||    
T  9583137 cttttaatgataaaaaattgaaatataatgatgtaaagttattgacaattgattagtgggtccaatttaagaactttgtgtgagatctgagtttgagtga 9583236  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
         || ||| ||||||||||| | || |||||||||||||||| ||||||| |||| ||||| || |||||||| | |||||||| |  || ||||||    
T  9583237 -----ttgagtgcttattagatactactattaaaaaattataaataagtgatgcgtacacgtgagactcatttaagaacccaaaaataggcgtgtccatt 9583331  T
Q  402 gtggttgctcta 413  Q
    |||| |||||||    
T  9583332 gtggatgctcta 9583343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 202 - 412
Target Start/End: Complemental strand, 36887698 - 36887492
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgaga-tatggattggaggg 300  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||  ||||||||| ||| ||||||| | ||   || ||||    
T  36887698 cttttaatattaaaaaattgaaatgcaatgatataaatttattgatagttgattagtggatctcatttaagaattttttgtgagactctgcgctgaaggg 36887599  T
Q  301 attaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccat 400  Q
    | | |||||     |||||||||| |  | ||||||| |||||||| |||||||||||| || | ||  ||||||| || ||||||||||||||||||||    
T  36887598 actgagtta-----ttattagatactattattaaaaatttataaataagtgatgtgtacacgcggcatccatttaaatacccaaaaatggatgtctccat 36887504  T
Q  401 tgtggttgctct 412  Q
    ||| | ||||||    
T  36887503 tgtagatgctct 36887492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 405
Target Start/End: Original strand, 26312428 - 26312664
Alignment:
Q  162 gtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtaga 261  Q
    |||||| |||||||| ||||  ||||||||   |||| | ||| |||||||||||||| |||||||| ||| ||||| |||||| |||||||||||| |     
T  26312428 gtcttacttaagacccccaatcttaagcggg--ccacactcttctaatattaaaaaatagaaatgtaatgacataaagttattggtagttgattagtggg 26312525  T
Q  262 tccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgc 361  Q
    | | |||||| || |||||||||||| ||  ||||||| ||| |||      |||||||| || | || ||||||||||||||||||||||||||||| |    
T  26312526 ttctatttaataaatttgtgtgagatctgagttggaggaattgagtg-----cttattaggtactactattaaaaaattataaatgagtgatgtgtacac 26312620  T
Q  362 gtgacacacatttaagtaaccaaaaatggatgtctccattgtgg 405  Q
    |||  || | |||||||| ||||||| || | ||||||||||||    
T  26312621 gtgtgacccgtttaagtacccaaaaaggggtatctccattgtgg 26312664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 65521 - 65416
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggga 301  Q
    ||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||| | | ||  |||||| || ||||||||||||  |||||||||||||    
T  65521 ttttaatataaaaaaattgaaatgtaatgatacaaacttattgatagttgattaatggttctcatttaataaatttgtgtgagatgttggattggaggga 65422  T
Q  302 ttaagt 307  Q
    ||||||    
T  65421 ttaagt 65416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 34234880 - 34234964
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| | || ||||||| || ||||| ||||||    
T  34234880 ttttaatattaaaaaattgaaatgtaatgatataaagttattgataattgattagtgggtctaatttaataaatttgtatgagat 34234964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 44887369 - 44887284
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||| | ||||  |||||| || ||||| ||||||    
T  44887369 cttttaatattaaaaaattgaaatataatgatataaatttattgatagttgattattggatctcatttaaaaaatttgtttgagat 44887284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 13022852 - 13022797
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||||||||||| | ||||||| |||||||||||||||||||    
T  13022852 ttttaatattaaaaaattgaaatgtaataatataaatttattgatagttgattagt 13022797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 413
Target Start/End: Original strand, 36267102 - 36267184
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
    ||||||||||||||||||||||||||||| ||||  ||  | ||||||||| ||||||| |||||| |||||||| |||||||    
T  36267102 ttaaaaaattataaatgagtgatgtgtacacgtgcgaccaagttaagtaacaaaaaatgaatgtcttcattgtggatgctcta 36267184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 412
Target Start/End: Original strand, 15269316 - 15269397
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctct 412  Q
    |||||||||||||||||||| ||||||||  |||| || |||||||||| | |||||||| | |||||||||||| ||||||    
T  15269316 ttaaaaaattataaatgagtaatgtgtacatgtgagacccatttaagtaccgaaaaatgggtatctccattgtggatgctct 15269397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 6459075 - 6459131
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagta 259  Q
    |||||||||||||||||| |||| || ||||| ||||||||||||||||||||||||    
T  6459075 ttttaatattaaaaaattaaaatataatgatagaaaattattgatagttgattagta 6459131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 202 - 274
Target Start/End: Original strand, 9733646 - 9733717
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaa 274  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||  ||| |||||||||    
T  9733646 cttttaatattaaaa-attgaaatgtagagatataaaattattgctagttgattggtaagtcccatttaagaa 9733717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 412
Target Start/End: Complemental strand, 16118040 - 16117835
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat--atggattggaggg 300  Q
    ||||||||||||||||| |  || || ||||||||| |||||||||||||||| || ||| | ||||| | | | ||||||||||  |||| |||||||     
T  16118040 ttttaatattaaaaaatggttatataatgatataaagttattgatagttgatttgtggataccatttatggaatatgtgtgagatgcatgg-ttggagga 16117942  T
Q  301 attaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccat 400  Q
    ||| |||      |||||||| || || | ||||||||||||||||||||||| ||||| ||||| || ||||||| ||   ||||||||  |||||||     
T  16117941 attgagtg-----cttattaggtattgatattaaaaaattataaatgagtgatatgtacacgtgagacccatttaaatactaaaaaatgggggtctccaa 16117847  T
Q  401 tgtggttgctct 412  Q
    ||||| ||||||    
T  16117846 tgtggatgctct 16117835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 413
Target Start/End: Original strand, 34375046 - 34375249
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggga 301  Q
    |||||||||||||| ||||||||||| | ||||||| ||||||||||||||||| | | ||| ||||||||  ||| | ||||||  | | |||||||||    
T  34375046 ttttaatattaaaa-attgaaatgtaataatataaagttattgatagttgattaatgggtcccatttaaga--tttttttgagatcttaggttggaggga 34375142  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
    || | ||     |||||||| || | || |||||||||||||||| ||||||||||||  |||| |   ||||||||| |||||||| |  |||||||||    
T  34375143 ttgaatt-----cttattaggtactactattaaaaaattataaataagtgatgtgtacatgtgagatctatttaagtatccaaaaataggagtctccatt 34375237  T
Q  402 gtggttgctcta 413  Q
    || | |||||||    
T  34375238 gttgatgctcta 34375249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 403
Target Start/End: Complemental strand, 37347957 - 37347769
Alignment:
Q  214 aaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagata----tggattggagggattaagtta 309  Q
    ||||||| | ||||| || |||||| ||||||| | |||||| |||| ||  ||||||||||||||||||||||     ||| ||||||||||| | ||     
T  37347957 aaaaattaatatgtaatggtataaagttattgacacttgatttgtaggtcatatttaagaactttgtgtgagatgatgctgggttggagggattgaatt- 37347859  T
Q  310 agtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgt 403  Q
        ||||||||||| | || |||||||||||||||| | |||||||||| ||||| |  |||||||| | |||||||| ||| | ||||||||    
T  37347858 ----cttattagatattactattaaaaaattataaataaatgatgtgtacacgtgagatccatttaagaacccaaaaatagatatttccattgt 37347769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 3668837 - 3668920
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatat 289  Q
    ||||||||||||||| ||| ||| |||||||||||||| ||||||| |||||| | ||  ||||||||| ||||||||| ||||    
T  3668837 taatattaaaaaattaaaacgtaatgatataaaattatcgatagttaattagtggttcttatttaagaaatttgtgtgatatat 3668920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 5038707 - 5038762
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||| |||| || | |||||||||||||||||||||||||||    
T  5038707 ttttaatattaaaaaattaaaatataataatataaaattattgatagttgattagt 5038762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 40999675 - 40999753
Alignment:
Q  204 tttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgt 282  Q
    ||||||||||||| |||||||| || ||||||||| |||||||| |||||||||| | | | ||||||||| |||||||    
T  40999675 tttaatattaaaagattgaaatataatgatataaagttattgatggttgattagtgggttccatttaagaaatttgtgt 40999753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 32887731 - 32887631
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    ||||||||||||||||||| ||||||| | ||||||| ||||| ||||||||||||| |||   |||||| || ||| ||||| || |||||||||| ||    
T  32887731 cttttaatattaaaaaattaaaatgtaataatataaagttatttatagttgattagtggat-ttatttaaaaaatttatgtgatatctggattggagaga 32887633  T
Q  302 tt 303  Q
    ||    
T  32887632 tt 32887631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 39368730 - 39368783
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    |||||||||| |||||||||||||||   |||||||||||||||||||||||||    
T  39368730 ttttaatattcaaaaattgaaatgtaaaaatataaaattattgatagttgatta 39368783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 298
Target Start/End: Original strand, 45135717 - 45135852
Alignment:
Q  162 gtcttatttaagacctccaactttaagcggagacca-cgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||| ||||||||||||  |||||||| |||||  | | |||||||||||||| || |||||| || ||||||||| |||||||||||||||| || |    
T  45135717 gtcttacttaagacctccacttttaagcg-agacccgcactcttttaatattaaataactgaaatataatgatataaagttattgatagttgatttgtgg 45135815  T
Q  261 atccaatttaagaactttgtgtgagatatggattggag 298  Q
     ||| |||||| |||||||| ||| || ||| ||||||    
T  45135816 gtcc-atttaaaaactttgtatgatatctgggttggag 45135852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 44583492 - 44583436
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagta 259  Q
    |||||||||||||||||||||||||  ||||||||| |||| |||| ||||||||||    
T  44583492 ttttaatattaaaaaattgaaatgtgatgatataaatttatggatatttgattagta 44583436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 6562938 - 6562986
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttg 252  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  6562938 ttttaatattaaaa-attgaaatgtaatgatataaagttattgatagttg 6562986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 34821004 - 34820955
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaattattgatagttgatt 255  Q
    ||||||||||||||| ||||||| ||||||||| ||| ||||||||||||    
T  34821004 taatattaaaaaattaaaatgtaatgatataaagttactgatagttgatt 34820955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 7868408 - 7868356
Alignment:
Q  204 tttaatattaaaaaattgaaatgtagtgatataaaa-ttattgatagttgatt 255  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||| ||||||    
T  7868408 tttaatgttaaaaaattgaaatgtaatgatataaaagttattgataattgatt 7868356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 9179432 - 9179372
Alignment:
Q  334 aaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgt 394  Q
    ||||||||||||||| | |||||||| ||||| || |||||||||| | ||||||||||||    
T  9179432 aaaaattataaatgaattatgtgtacacgtgatactcatttaagtacctaaaaatggatgt 9179372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 16341933 - 16341985
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatt 255  Q
    |||||||||||||||||||  |||||  |||||||| ||||||||||||||||    
T  16341933 ttttaatattaaaaaattgttatgtaaagatataaagttattgatagttgatt 16341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 41068909 - 41068866
Alignment:
Q  212 taaaaaattgaaatgtagtgatataaaattattgatagttgatt 255  Q
    |||||||||||||| || ||||||||| ||||||||||||||||    
T  41068909 taaaaaattgaaatataatgatataaagttattgatagttgatt 41068866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 3949108 - 3949058
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttga 253  Q
    |||||| |||| |||||||||||||| ||||||||| ||||||||| ||||    
T  3949108 ttttaacattataaaattgaaatgtaatgatataaagttattgataattga 3949058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 31050113 - 31050055
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatg 389  Q
    |||||||||||||||| ||||||||||||  |||| || ||||||||||  ||||||||    
T  31050113 ttaaaaaattataaataagtgatgtgtacatgtgagactcatttaagtactcaaaaatg 31050055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 303
Target Start/End: Complemental strand, 37648418 - 37648316
Alignment:
Q  203 ttttaatattaaaaaa-ttgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggg 300  Q
    |||||||||||||||| || |||| |  |||||||||||||||||| ||||||||  ||||||| || || ||  |||||||| ||  ||||||||||||    
T  37648418 ttttaatattaaaaaaattaaaatattatgatataaaattattgatggttgattaaaagatccatttaaaaaaaattgtgtgaaatgttggattggaggg 37648319  T
Q  301 att 303  Q
    |||    
T  37648318 att 37648316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 378
Target Start/End: Complemental strand, 14332092 - 14332047
Alignment:
Q  333 aaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagt 378  Q
    ||||||||||||||||||||||||||| ||||| |  |||||||||    
T  14332092 aaaaaattataaatgagtgatgtgtacacgtgagatccatttaagt 14332047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 28857071 - 28857158
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattga---tagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||||| |||| || ||||||| ||||| |   |||||||||||||  ||  ||||||||| ||||||| ||||    
T  28857071 ttttaatattaaaaaattgatatgtggtaatataaagttattaatactagttgattagtaagtcttatttaagaaatttgtgtaagat 28857158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 9e-43; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 203 - 404
Target Start/End: Original strand, 39055158 - 39055354
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||| | |   |||||||||||||||||||||| ||  ||||||||||    
T  39055158 ttttaatattaaaaaattaaaatgtaatgatataaagttattgatagttgattagtgggtttcatttaagaactttgtgtgagatctgagttggagggat 39055257  T
Q  303 taagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattg 402  Q
        |||| |||||||||| || |  | ||||||||||||||||||||||||||||||||||| || |||||||| | | |||||||| |||||||||||    
T  39055258 ----ttaa-tacttattaggtactaatattaaaaaattataaatgagtgatgtgtacgcgtgagacccatttaagaacctaaaaatgggtgtctccattg 39055352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 202 - 413
Target Start/End: Complemental strand, 35332112 - 35331906
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||| ||    
T  35332112 cttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatttaagaactttgtgtgagatctgggttggagtga 35332013  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
         || ||| |||||||  || | || |||||||| ||||||| ||| |||||||  ||||  || |||||||  | | |||||||||| ||||||||    
T  35332012 -----ttgagtgcttattatgtactactattaaaaaagtataaataagtaatgtgtatacgtgggactcatttaacaaccaaaaaatggatatctccatt 35331918  T
Q  402 gtggttgctcta 413  Q
    |||| |||||||    
T  35331917 gtggatgctcta 35331906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 202 - 405
Target Start/End: Original strand, 52199798 - 52199996
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | ||| |||||||||||||||||||||| ||| |||||| ||    
T  52199798 cttttaatattaaaaaattgaaatataatgatatataattattgatagtggattagtgggtcccatttaagaactttgtgtgagatctgggttggagtga 52199897  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
         || | | |||||||| || | || |||||||||||||||||||||| |||| | ||||  || |||||||| | |||||||||| ||||||| ||    
T  52199898 -----ttgaatgcttattaggtactactattaaaaaattataaatgagtgacgtgtgcacgtgggacccatttaagaacccaaaaatgggtgtctccgtt 52199992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 359
Target Start/End: Complemental strand, 822551 - 822356
Alignment:
Q  158 caaggtcttatttaagacctccaactttaagcggagaccacgcg-cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    |||||||||||  |||||| |||||||||||||||  || | |  ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  822551 caaggtcttat--aagacccccaactttaagcggaacccgcacaacttttaatattaaaaaattgaaatgtagtgatataatgttattgatagttgatta 822454  T
Q  257 gtagatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtg 356  Q
     |   ||  |||||||||||||||||||||| ||| |||||||||     || ||||||||||||||| | || |||||||| ||||||| | |||||||    
T  822453 atgtgtctcatttaagaactttgtgtgagatctgggttggaggga-----ttgagtacttattagatactactattaaaaaactataaataaatgatgtg 822359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 358
Target Start/End: Complemental strand, 39629322 - 39629171
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||| ||||| ||||  |||||||||||||||||| ||| ||| |||||| ||    
T  39629322 cttttaatattaaaaaattgaaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgggttggagtga 39629223  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgta 358  Q
         || ||| ||||||||||| | || |||||||||||||||| | |||||||||    
T  39629222 -----tttagtgcttattagatactactattaaaaaattataaataaatgatgtgta 39629171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 203 - 413
Target Start/End: Original strand, 2396294 - 2396500
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggga 301  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| | | | ||||||||| ||| ||||||||  ||  || ||| ||    
T  2396294 ttttaatattaaaaacttgaaatgtactgatataaagttattgatagttgattagtgggttccatttaagaaatttttgtgagatgctgagtttgagcga 2396393  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
    || ||||     |||||||| || | || |||| ||||||||||| |||||||||||| ||||  || |||||||| | ||||||||||||||||| |||    
T  2396394 ttgagtt-----cttattaggtactactattaacaaattataaataagtgatgtgtacacgtgggactcatttaagaacccaaaaatggatgtctctatt 2396488  T
Q  402 gtggttgctcta 413  Q
    |||  |||||||    
T  2396489 gtgaatgctcta 2396500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 202 - 358
Target Start/End: Original strand, 23359097 - 23359248
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||||||||||| |  | ||||||| |||||||||||||||| || ||||  |||||||||||||||||||||| | | |||||| ||    
T  23359097 cttttaatattaaaaaattgaaatattataatataaagttattgatagttgatttgtggatctcatttaagaactttgtgtgagatctaggttggagtga 23359196  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgta 358  Q
         || ||| ||||||||||| | || |||||||||||||||||| |||||||||    
T  23359197 -----ttgagtgcttattagatactactattaaaaaattataaatgaatgatgtgta 23359248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 413
Target Start/End: Complemental strand, 10180741 - 10180536
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggga 301  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||||||| || ||||  ||||||||| ||||||| ||||  | | ||||||| |    
T  10180741 ttttaatattaaaaaattgatatgtaatgatataaagttattgatagttgatt-gtggatctcatttaagaaatttgtgtaagatgctaggttggaggca 10180643  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
    || ||||     |||||||| || | || ||||||||||||||||||||||| ||||| ||||| |  ||||||||||   ||||||||  |||||||||    
T  10180642 ttgagtt-----cttattaggtactactattaaaaaattataaatgagtgatatgtacacgtgagatccatttaagtacttaaaaatgggagtctccatt 10180548  T
Q  402 gtggttgctcta 413  Q
    |||  |||||||    
T  10180547 gtgaatgctcta 10180536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 410
Target Start/End: Original strand, 8824959 - 8825158
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    ||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||| | | ||||||||| ||| ||| |||||||||||| ||       
T  8824959 cttttaatattaaaa-attgaaatataatgatataaagttattgatagttgattagtaggttccatttaagaattttatgtaagatatggattgaag--- 8825054  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
     ||| || | |||||||||||||   ||  |||||||||||||||||||||||| ||| ||||  || || ||||| | || |||||  |||||||||||    
T  8825055 -taa-ttgaatacttattagata---ctactaaaaaattataaatgagtgatgtatacacgtgtgactcaattaagaacccgaaaataaatgtctccatt 8825149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 397
Target Start/End: Original strand, 12447422 - 12447603
Alignment:
Q  211 ttaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggagggattaagtta 309  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| | ||  ||||||||| ||| ||||||||  ||| ||  | ||||| ||||     
T  12447422 ttaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggtcttatttaagaaatttttgtgagatgctgggttaaaaggattgagtt- 12447520  T
Q  310 agtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctc 397  Q
        ||||||| | | | || |||||||||||||||| |||||| ||||| ||||| || |||||||||| |||||||||||||||||    
T  12447521 ----cttattatagactactattaaaaaattataaataagtgatttgtactcgtgagac-catttaagtatccaaaaatggatgtctc 12447603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 203 - 404
Target Start/End: Original strand, 35144384 - 35144580
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    |||||||||||||||||||||||||| || |||||||||||| || ||| || ||| ||| | ||||||||| ||||| |||||| ||| |||||||||     
T  35144384 ttttaatattaaaaaattgaaatgtaatggtataaaattattaatggtttatcagtggattctatttaagaaatttgtatgagatctgggttggaggga- 35144482  T
Q  303 taagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattg 402  Q
        || | | ||||||||||| | ||  ||||||||||||||| | |||| ||||| ||||| || ||||||| || | |||||| | ||| |||||||    
T  35144483 ----ttgaatgcttattagatactactactaaaaaattataaataattgatatgtacacgtgagacccatttaaataccaaaaaataggtgtatccattg 35144578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 289
Target Start/End: Complemental strand, 2574218 - 2574091
Alignment:
Q  162 gtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtaga 261  Q
    |||| ||||||||| |||||  ||||||||   |||| | ||||||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||  |    
T  2574218 gtctcatttaagacttccaatcttaagcgggatccacactcttttaacattaaaaaattgaaatgtaatgatataaagttattaatagttgattagtgaa 2574119  T
Q  262 tccaatttaagaactttgtgtgagatat 289  Q
    | | ||||||||| ||||| ||||||||    
T  2574118 ttctatttaagaaatttgtatgagatat 2574091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 206 - 403
Target Start/End: Complemental strand, 35309110 - 35308917
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagata-tggattggagggatta 304  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||||||||   ||| |||||| ||  ||||||||| |  | |  | ||||||||     
T  35309110 taatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgagtcccatttaaaaaaattgtgtgagttgctaggctagagggattg 35309011  T
Q  305 agttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgt 403  Q
    |||     |||||||||||| | || |||||||||||||||| ||||| |||||||||||| || ||||||||||  |||||||| || |||| |||||    
T  35309010 agt-----acttattagatattactattaaaaaattataaataagtgacgtgtacgcgtgagactcatttaagtattcaaaaatgaatatctctattgt 35308917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 202 - 280
Target Start/End: Original strand, 43968776 - 43968854
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgt 280  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| | ||| ||||||||| |||||    
T  43968776 cttttaatattaaaaaattaaaatatagtgatataaagttattgatagttgattagtgggtcctatttaagaattttgt 43968854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 212 - 386
Target Start/End: Original strand, 51655132 - 51655305
Alignment:
Q  212 taaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagata-tggattggagggattaagttaa 310  Q
    |||||||||||  |||| ||||||||||||||||||||||||||||| | ||  |||||| || ||||||| ||||  ||| ||| | ||||| |  | |    
T  51655132 taaaaaattgatttgtaatgatataaaattattgatagttgattagttggtctcatttaataaatttgtgtaagatgctgggttgaaaggattga--tca 51655229  T
Q  311 gtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaa 386  Q
     | ||||||||||| | ||||||||| |||||||||||||||||| ||| ||||| || ||||||| || ||||||    
T  51655230 attcttattagatactactgttaaaatattataaatgagtgatgtttacacgtgatacccatttaaatatccaaaa 51655305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 30865887 - 30865942
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  30865887 ttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagt 30865942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 35382492 - 35382391
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    ||||||||||| |||||||||||| || ||||||||| ||| |||||||||||||||   ||  ||||||||||||||||||| || ||| |||||| ||    
T  35382492 cttttaatatttaaaaattgaaatataatgatataaagttagtgatagttgattagtgtgtctcatttaagaactttgtgtgaaatctgggttggagtga 35382393  T
Q  302 tt 303  Q
    ||    
T  35382392 tt 35382391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 413
Target Start/End: Original strand, 26699109 - 26699208
Alignment:
Q  314 cttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
    ||||||||||| | || ||||||| ||||||  |||||||||||||  |||  |  |||||||||| ||||||||||||||||||||||||| |||||||    
T  26699109 cttattagatattactattaaaaatttataagcgagtgatgtgtacatgtgggatccatttaagtacccaaaaatggatgtctccattgtggatgctcta 26699208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 44500489 - 44500544
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||    
T  44500489 ttttaatattaaaaaattgaaatgtaatgttataaaactattgatagttgattagt 44500544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 410
Target Start/End: Original strand, 49210982 - 49211227
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    ||||||| |||||||||| |  |||||||||   || ||| ||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||| | |    
T  49210982 ggtcttacttaagacctc-atttttaagcgggatcctcgctcttttaatattaaaaaattaaaatgtaatgatataaagttattgataattgattaatgg 49211080  T
Q  261 atccaatttaagaactttgtgtgagat-atggattggagggattaagttaagtacttattagatagtgctgtt-aaaaaattataaatgagtgatgtgta 358  Q
     ||  ||||||| | ||| ||||||||  | | ||||||||||  ||||     ||||||||||| | || || |||||||||||||| | |||| ||||    
T  49211081 gtctcatttaaggaatttttgtgagatgctaggttggagggatagagtt-----cttattagatactactattaaaaaaattataaataaatgatatgta 49211175  T
Q  359 cgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgct 410  Q
    | ||||| ||  |||||||||  |||||||| |||||| |||| ||| ||||    
T  49211176 cacgtgaaacctatttaagtactcaaaaatgaatgtcttcattatggatgct 49211227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 53096730 - 53096652
Alignment:
Q  209 tattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||||| |||| ||||| | ||||||| ||||||||||||||||||| | ||| ||||||||| ||||||||||||    
T  53096730 tattaaaaatttgatatgtaataatataaagttattgatagttgattagttggtcccatttaagaaatttgtgtgagat 53096652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 413
Target Start/End: Original strand, 45833894 - 45834049
Alignment:
Q  252 gattagtagatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtg 351  Q
    ||||||| | ||| |||||||||||||||||||||| ||| |||||| |||| |||      ||||||| ||| | || |||||||||||||||||||||    
T  45833894 gattagtgggtcccatttaagaactttgtgtgagatctgggttggagtgattgagtg-----cttatta-atattactattaaaaaattataaatgagtg 45833987  T
Q  352 atgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
    |||||||| ||||| || ||||| ||    ||||||| ||||||||| |||| | |||||||    
T  45833988 atgtgtacacgtgagacccattttagacctcaaaaattgatgtctcctttgtagatgctcta 45834049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 410
Target Start/End: Complemental strand, 28909500 - 28909405
Alignment:
Q  315 ttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgct 410  Q
    |||||||||| | |||||||||||||||||||||| ||||| ||| ||||| |  |||||||  | ||||||||  ||||||||||||||| ||||    
T  28909500 ttattagatactactgttaaaaaattataaatgagcgatgtatacacgtgagattcatttaataacccaaaaataaatgtctccattgtggatgct 28909405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 24030621 - 24030679
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtaga 261  Q
    |||||||||||||||||| ||||||| | || |||| ||||||||||||||||||||||    
T  24030621 ttttaatattaaaaaattaaaatgtaataatgtaaagttattgatagttgattagtaga 24030679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 22628474 - 22628550
Alignment:
Q  213 aaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatat 289  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||   ||| |||||| || |||||||| |||||    
T  22628474 aaaaaattaaaatgtaatgatataaagttattgatagttgattagtgagtcccatttaaaaaatttgtgtgtgatat 22628550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 54018462 - 54018386
Alignment:
Q  329 tgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtgg 405  Q
    ||||||||| |||||||||||||||||||||  |||| ||  |||||| || |||||||| | ||||||||||||||    
T  54018462 tgttaaaaagttataaatgagtgatgtgtacatgtgatacctatttaaatacccaaaaataggtgtctccattgtgg 54018386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 31262546 - 31262461
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaa---attattgatagttgattagtagatccaatttaagaactttgtgtga 284  Q
    ||||||||||||||||||||||||||| || ||||||   ||| |||||||||||||||| | ||| ||| ||||| ||| |||||    
T  31262546 cttttaatattaaaaaattgaaatgtaatggtataaagttattgttgatagttgattagtgggtcccattaaagaaatttttgtga 31262461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 54018577 - 54018522
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    ||||||||||||||||||||||| || | ||||||||||||||| |||| ||||||    
T  54018577 ttttaatattaaaaaattgaaatataataatataaaattattgacagtttattagt 54018522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 38865077 - 38865004
Alignment:
Q  231 gatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggattaagt 307  Q
    ||||||||||| ||||||||||||| || |||||    ||||||||||||||||||| ||| |||||| ||||||||    
T  38865077 gatataaaattgttgatagttgattggtggatccc---taagaactttgtgtgagatctgggttggagtgattaagt 38865004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 5036088 - 5036047
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattat 243  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  5036088 cttttaatattaaaaaattgaaatgtaatgatataaagttat 5036047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 8489655 - 8489610
Alignment:
Q  204 tttaatattaaaaaattgaaatgtagtgatataaaattattgatag 249  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||    
T  8489655 tttaataataaaaaattgatatatagtgatataaaattattgatag 8489610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 11346975 - 11347060
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||| |||||| |||| || ||||||||||||||| ||| ||||||| |   ||  ||||||||| ||||||||||||    
T  11346975 cttttaatattataaaattaaaatataatgatataaaattattaataattgattaatgcgtctcatttaagaaatttgtgtgagat 11347060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 376
Target Start/End: Original strand, 23607308 - 23607518
Alignment:
Q  162 gtcttatttaagacctccaactttaagcggagacca-cgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||| |||||||||||||  |||||||| ||||| | | ||||||||||| ||||||| |||||||  |||| ||  |||||||||| |||||||| |    
T  23607308 gtcttacttaagacctccaatcttaagcgg-gaccatcactcttttaatattgaaaaattaaaatgtaaagataaaatgttattgatagctgattagtgg 23607406  T
Q  261 atccaatttaagaactttg-tgtgagat-atggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgta 358  Q
    |||| |||| | || |||| ||||||||  |||||| ||| |||| ||||     |||| |||||| | || |||||||||||||||| ||| |||||||    
T  23607407 atcccatttta-aattttgttgtgagatgctggattagagagattgagtt-----cttaatagatactactattaaaaaattataaataagtaatgtgta 23607500  T
Q  359 cgcgtgacacacatttaa 376  Q
      ||||| || |||||||    
T  23607501 tacgtgagacccatttaa 23607518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 41916116 - 41916063
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatt 255  Q
    ||||||||||||||||||| |||| || ||||||||||||||| ||| ||||||    
T  41916116 cttttaatattaaaaaattaaaatataatgatataaaattatttatacttgatt 41916063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 53779481 - 53779428
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    |||||||||||||||||| |||| || |||||| || |||||||||||||||||    
T  53779481 ttttaatattaaaaaattaaaatataatgatattaagttattgatagttgatta 53779428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 246
Target Start/End: Complemental strand, 25424420 - 25424376
Alignment:
Q  203 ttttaatattaaaaaa-ttgaaatgtagtgatataaaattattga 246  Q
    |||||||||||||||| |||||||||| |||||||||||||||||    
T  25424420 ttttaatattaaaaaaattgaaatgtaatgatataaaattattga 25424376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 25436027 - 25435963
Alignment:
Q  207 aatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaa 271  Q
    ||||||| |||||||||||||| || |||||| ||||||||| | ||||||| ||||| ||||||    
T  25436027 aatattataaaattgaaatgtaatgctataaagttattgataatggattagtcgatcccatttaa 25435963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 11934051 - 11933988
Alignment:
Q  349 gtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctct 412  Q
    ||||||||||| ||||| || |||||||| | |||||||||| |||||| ||||||| ||||||    
T  11934051 gtgatgtgtacacgtgagactcatttaagaacccaaaaatgggtgtctcaattgtggatgctct 11933988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 389
Target Start/End: Original strand, 28897710 - 28897768
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatg 389  Q
    ||||||||||||||||||||||| | ||| ||||| || ||||||||||  ||||||||    
T  28897710 ttaaaaaattataaatgagtgatatatacacgtgagactcatttaagtacgcaaaaatg 28897768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 357
Target Start/End: Original strand, 44540009 - 44540051
Alignment:
Q  315 ttattagatagtgctgttaaaaaattataaatgagtgatgtgt 357  Q
    |||||||||| |||| ||||||| |||||||||||||||||||    
T  44540009 ttattagatactgctattaaaaatttataaatgagtgatgtgt 44540051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 16461131 - 16461184
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    ||||||||||||||| || |||| || ||||||||| ||||||||| |||||||    
T  16461131 ttttaatattaaaaacttaaaatataatgatataaagttattgataattgatta 16461184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 41963727 - 41963674
Alignment:
Q  204 tttaatatta-aaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    |||||||||| ||||| |||||| || |||||||||||||||||||| ||||||    
T  41963727 tttaatattacaaaaaatgaaatataatgatataaaattattgatagatgatta 41963674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 203 - 405
Target Start/End: Complemental strand, 36658016 - 36657819
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    |||||||||||||| ||| |||| || || |||||||||||||||||||||||||| | ||| |||||||||||||||||||||| ||| |||||| ||     
T  36658016 ttttaatattaaaatattaaaatataatggtataaaattattgatagttgattagtgggtcccatttaagaactttgtgtgagatctgggttggagtga- 36657918  T
Q  303 taagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattg 402  Q
        || ||| ||||||||||||| || |||||||||||||||||||  |||||||| | ||| || |||||||| | |||||||||| |||||||||||    
T  36657917 ----ttgagtgcttattagatagtactattaaaaaattataaatgagcaatgtgtacacatgagacccatttaagaacccaaaaatgggtgtctccattg 36657822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 403
Target Start/End: Complemental strand, 43302247 - 43302051
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| | ||| ||||||||| | |||||||||| | |||||||| ||    
T  43302247 cttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtgggtcccatttaagaattatgtgtgagatctagattggagtga 43302148  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
         || |||| ||||||| || | || |||||||||||||||||||| ||||||||  |||| || ||  |||| |  |||||||||||||||| |||    
T  43302147 -----ttgagtatttattaggtactactattaaaaaattataaatgagttatgtgtacaggtgagactcacataagaattcaaaaatggatgtctcaatt 43302053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 23156369 - 23156264
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | | ||  |||||||||||||||||||||| | | |||||||||    
T  23156369 cttttaatattaaaaaattaaaatgtagtgatataaagttattgatagttgattaatgggtctcatttaagaactttgtgtgagatctaggttggaggga 23156270  T
Q  302 ttaagt 307  Q
    ||||||    
T  23156269 ttaagt 23156264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 44441460 - 44441347
Alignment:
Q  158 caaggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattag 257  Q
    |||||| |||||||||||| |||||||||| | | |  | | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  44441460 caaggtattatttaagacccccaactttaaacagggcgcgcacgcttttaatattaaaaaattaaaatgtagtgatataaagttattgatagttgattag 44441361  T
Q  258 tagatccaatttaa 271  Q
    | | ||| ||||||    
T  44441360 tgggtcccatttaa 44441347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 203 - 358
Target Start/End: Original strand, 31330390 - 31330541
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggga 301  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||  ||  ||||||||| ||||||||| ||  ||| |||||||||    
T  31330390 ttttaatattaaaaaattgaaatgtaatgatatatacttattgatagttgattagtacgtctcatttaagaaatttgtgtgaaatgttgggttggaggga 31330489  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgta 358  Q
         || ||| |||||||| || | |  ||||||||||||||||||||||||||||    
T  31330490 -----ttgagtgcttattaggtactaccattaaaaaattataaatgagtgatgtgta 31330541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 36901166 - 36901080
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagata 288  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||| ||  ||||||||| ||| |||||||||    
T  36901166 cttttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtctcatttaagaaatttttgtgagata 36901080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 203 - 359
Target Start/End: Original strand, 19987155 - 19987307
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggga 301  Q
    |||||||||||||||||||  ||||| |||| |||| ||||||||||| |||| |||| ||| ||||||||||||||||||||||  ||| |||||||||    
T  19987155 ttttaatattaaaaaattgttatgtaatgatttaaagttattgatagtcgatttgtaggtcccatttaagaactttgtgtgagatgttgggttggaggga 19987254  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtac 359  Q
         | | ||||||||||  || | || |||||||||||||||||| ||||||||||    
T  19987255 -----tcatgtacttattatgtactactattaaaaaattataaatgaatgatgtgtac 19987307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 161 - 402
Target Start/End: Complemental strand, 36482176 - 36481940
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    ||||||| |||||||| |||  |||||||||  | | | | |||||||||||||||||||||||| || | ||||||| |||||||||||||||||||      
T  36482176 ggtcttacttaagacccccacttttaagcgggaatcgcactcttttaatattaaaaaattgaaatataattatataaagttattgatagttgattagtga 36482077  T
Q  261 atccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacg 360  Q
    |||  ||||||||||||||||||| || ||| || ||| ||     || ||| ||||||| ||| | || |||||| |||| || |||||||| |||||     
T  36482076 atctcatttaagaactttgtgtgatatctgggttagagtga-----ttgagtgcttattaaatactactattaaaatattacaagtgagtgatatgtaca 36481982  T
Q  361 cgtgacacacatttaagtaaccaaaaatggatgtctccattg 402  Q
    ||||| ||  ||||||| |  ||||||| | |||||||||||    
T  36481981 cgtgaaacctatttaagaactcaaaaataggtgtctccattg 36481940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 37698483 - 37698584
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||| |||||| | |   ||||||||| |||||||||||| ||| |||||||||    
T  37698483 cttttaatattaaaaaattaaaatgtagtgatataaagttgttgatagtttattagtgggtttcatttaagaattttgtgtgagatttgggttggaggga 37698582  T
Q  302 tt 303  Q
    ||    
T  37698583 tt 37698584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 161 - 413
Target Start/End: Original strand, 44441545 - 44441793
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||||| |||  ||||| |||   || | | |||||||||||||||||||||| |||| ||||||  | || |||||||||||||||| |    
T  44441545 ggtcttatttaagacccccacttttaatcgggtccctcactcttttaatattaaaaaattgaagtgtaatgatatccagttgttgatagttgattagtgg 44441644  T
Q  261 atccaatttaagaactttgtgtgagat-atggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtac 359  Q
     ||  ||||||||| ||| ||||||||  ||| ||||||  ||| ||||     |||||||| || | | ||||||||||||||||||||||||||||||    
T  44441645 gtctcatttaagaaatttttgtgagatgctgggttggagatattgagtt-----cttattaggtactaccgttaaaaaattataaatgagtgatgtgtac 44441739  T
Q  360 gcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
       ||| || |||||||| | ||| ||||  || |||||||||||| |||||||    
T  44441740 atttgagacccatttaagaacccagaaataaatatctccattgtggatgctcta 44441793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 303
Target Start/End: Original strand, 2008585 - 2008685
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||   | | | ||||||||| |||||||||||| ||| || |||||||    
T  2008585 ttttaatattaaaaaattgaaatgtaatggtataaaattattgatagttgattaacgggttccatttaagaaatttgtgtgagatctgggttagagggat 2008684  T
Q  303 t 303  Q
    |    
T  2008685 t 2008685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 402
Target Start/End: Complemental strand, 36656736 - 36656542
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    |||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||  | | ||  ||||||||||||||| |||||||   ||||||||||     
T  36656736 ttttaatattaaaaaattgatatgtaatgatataaagttattaatagttgatttatgggtctcatttaagaactttgtatgagatactaattggaggga- 36656638  T
Q  303 taagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattg 402  Q
        || |||| ||||||||||   || ||||||||||||||||||||||| | ||   |||| || |||||||||| | |||||| || ||||| ||||    
T  36656637 ----ttgagtatttattagataccactattaaaaaattataaatgagtgatatatataagtgagacccatttaagtaccaaaaaatagaggtctctattg 36656542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 413
Target Start/End: Complemental strand, 47841550 - 47841344
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggga 301  Q
    |||||||||||||||||||| ||||  || |||||| |||||||||||||||| ||   ||  ||||||||||||| ||||||||  | | |||||||||    
T  47841550 ttttaatattaaaaaattgatatgtgatggtataaagttattgatagttgatttgtgagtctcatttaagaactttatgtgagatgcttggttggaggga 47841451  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
         || ||||||||||| ||| | || ||| |||||||||||||||| ||||||||  |||  || |||||||||| | ||||| ||| |||||||||    
T  47841450 -----ttgagtacttattaaatactactattacaaaattataaatgagttatgtgtacatgtgggactcatttaagtacctaaaaaaggaggtctccatt 47841356  T
Q  402 gtggttgctcta 413  Q
    | || |||||||    
T  47841355 gcggatgctcta 47841344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 13057865 - 13057950
Alignment:
Q  203 ttttaatattaaaaaatt-gaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||| |||||||  ||||||||| ||||||||||||||||||||  ||  ||||||||| ||||||||||||    
T  13057865 ttttaatattaaaaaatttgaaatgttatgatataaagttattgatagttgattagtaagtcacatttaagaaatttgtgtgagat 13057950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 412
Target Start/End: Complemental strand, 5513976 - 5513769
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatgga-ttggaggg 300  Q
    |||||||||| |||||||||||||||| | ||||||| |||||||| || |||||||   ||  |||||| || |||| |||||||| ||  ||||||||    
T  5513976 cttttaatataaaaaaattgaaatgtaattatataaagttattgatggtcgattagtgagtctcatttaaaaaatttgcgtgagatacggggttggaggg 5513877  T
Q  301 attaagttaagtacttattagatagtgctgttaaaaaa-ttataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctcca 399  Q
    ||| ||      |||||||||||| | || |||||||| |||||||| |||||||||||| ||||| |  ||||||| || |  ||||| ||||||| ||    
T  5513876 attgaga-----acttattagatattactattaaaaaaattataaataagtgatgtgtacacgtgagatccatttaaatatctgaaaattgatgtcttca 5513782  T
Q  400 ttgtggttgctct 412  Q
    |||||| ||||||    
T  5513781 ttgtggatgctct 5513769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 6068093 - 6068177
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||||||||||| ||||| |||||||||| |||||||||||| |||   |||||| || ||||| ||||||    
T  6068093 ttttaatattaaaaaattgaaatgtaatgatagaaaattattggtagttgattagtggattttatttaaaaaatttgtatgagat 6068177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 39853769 - 39853849
Alignment:
Q  207 aatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||||||||||||||| || || |||||| ||||||||||||||||||| | ||| ||||||||| ||| ||||||||    
T  39853769 aatattaaaaaattgaaatataatggtataaagttattgatagttgattagtgggtcccatttaagaaatttttgtgagat 39853849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 29914528 - 29914426
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatgga-ttggagggatta 304  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||||||||    ||| ||||| ||| |||||||||||| |  | ||||||||||||    
T  29914528 taatattaaaaaattgaaatgtaataatataaagttattgatagttgattagcgagtcccatttatgaaatttgtgtgagatgttaagttggagggatta 29914429  T
Q  305 agt 307  Q
    |||    
T  29914428 agt 29914426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 46748198 - 46748101
Alignment:
Q  160 aggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattag 257  Q
    |||||||| |||||||| |||  |||||||||   |||| | |||||||||||||| |||||| ||||| ||||||||| ||||||| ||||||||||    
T  46748198 aggtcttagttaagacccccacttttaagcgggacccacactcttttaatattaaataattgatatgtaatgatataaagttattgacagttgattag 46748101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 19753089 - 19753042
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagt 250  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  19753089 ttttaagattaaaaaattgaaatgtaatgatataaaattattgatagt 19753042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 25307611 - 25307532
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgt 282  Q
    |||||||||||||||||||| ||||| ||||||||  |||||||| ||||||| || ||||  ||||||||| |||||||    
T  25307611 ttttaatattaaaaaattgagatgtaatgatataagtttattgattgttgatttgtggatctcatttaagaaatttgtgt 25307532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 397
Target Start/End: Complemental strand, 31322334 - 31322251
Alignment:
Q  314 cttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctc 397  Q
    |||||||| || | ||||||||||||||||||||||||||||||||   ||  || |||||||||| | |||||||||||||||    
T  31322334 cttattaggtactactgttaaaaaattataaatgagtgatgtgtacatatgtgacccatttaagtaccaaaaaatggatgtctc 31322251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 48767285 - 48767230
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||    
T  48767285 ttttaataataaaaaattgaaatgcaatgatataaagttattgatagttgattagt 48767230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 359
Target Start/End: Original strand, 4958234 - 4958389
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat----atggattggag 298  Q
    |||||||||||||||||||| ||||| ||||||||| || ||||||||||||| || | |   |||||||||  |||||||||||     | | ||||||    
T  4958234 ttttaatattaaaaaattgatatgtaatgatataaagttgttgatagttgatttgtgggtttcatttaagaaagttgtgtgagatgttgttcggttggag 4958333  T
Q  299 ggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtac 359  Q
    ||||| |||   ||  |||||||||| | || |||||||||||||||||| ||||||||||    
T  4958334 ggattgagt---gt--ttattagatactactattaaaaaattataaatgaatgatgtgtac 4958389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 4874994 - 4874941
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    |||||||||| ||||||| ||||||| ||||||||| |||||||||||||||||    
T  4874994 ttttaatatttaaaaattaaaatgtaatgatataaagttattgatagttgatta 4874941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 15018375 - 15018435
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatc 263  Q
    |||||||||| ||||||| ||||||| | ||||||| ||||||||| ||||||||||||||    
T  15018375 ttttaatattcaaaaattaaaatgtaataatataaagttattgataattgattagtagatc 15018435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 46282258 - 46282182
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttg 279  Q
    |||||||||| ||||||| |||  || ||||||||||||||||||||||||||||| | ||  ||||||||| ||||    
T  46282258 ttttaatattcaaaaattaaaacataatgatataaaattattgatagttgattagtgggtctcatttaagaaatttg 46282182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 25324629 - 25324574
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||||  || || |||||||||||||||||||| ||||||||    
T  25324629 ttttaatattaaaaaattgttatataatgatataaaattattgatagctgattagt 25324574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 36039051 - 36039106
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||| |||||| || ||||||||| |||| ||||||||||||||    
T  36039051 ttttaatattaaaaaaatgaaatataatgatataaagttatcgatagttgattagt 36039106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 413
Target Start/End: Original strand, 9429758 - 9429840
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
    |||||||||||||||||| || ||||||| |||||||| ||||||  || | ||||||  ||||||||||| ||| |||||||    
T  9429758 ttaaaaaattataaatgaatgttgtgtacacgtgacacccatttagatacctaaaaataaatgtctccattatggatgctcta 9429840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 19594045 - 19594098
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    |||||| |||||||||||||||| || ||||||||| |||||||||||| ||||    
T  19594045 ttttaagattaaaaaattgaaatataatgatataaagttattgatagttaatta 19594098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 27334368 - 27334421
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    |||||||||||||| ||||||||||| ||||||| | |||||||||| ||||||    
T  27334368 ttttaatattaaaatattgaaatgtaatgatatagagttattgatagatgatta 27334421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 32724227 - 32724272
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgata 248  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  32724227 ttttaatattaaaaaattgatatgtaatgatataaagttattgata 32724272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 38223971 - 38224023
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatt 255  Q
    |||||||||||||||||| | ||||| ||||||||  ||||||||||||||||    
T  38223971 ttttaatattaaaaaatttatatgtaatgatataatgttattgatagttgatt 38224023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 23802262 - 23802216
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgata 248  Q
    |||| |||||||||||||||||||||| ||||||||| | |||||||    
T  23802262 ctttcaatattaaaaaattgaaatgtaatgatataaagtaattgata 23802216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 9429643 - 9429700
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaa-ttattgatagttgattagtagat 262  Q
    |||||||| || ||||||||||| |||||||||| |||||||||| |||||| |||||    
T  9429643 taatattataatattgaaatgtaatgatataaaagttattgatagatgattaatagat 9429700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 41015398 - 41015443
Alignment:
Q  307 ttaagtacttattagatagtgctgttaaaaaattataaatgagtga 352  Q
    |||||||||||||||||| |  | ||||||||||||||||||||||    
T  41015398 ttaagtacttattagatattattattaaaaaattataaatgagtga 41015443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 23801905 - 23801763
Alignment:
Q  266 atttaagaactttgtgtgagata-tggattggagggattaagt---taagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgc 361  Q
    ||||||||| ||| ||||||||  ||| ||||||||||| |||   | |||||||||||| || |  | ||||||||||| ||| | ||||| ||||| |    
T  23801905 atttaagaaatttttgtgagatgctgggttggagggattgagtatttgagtacttattaggtactattattaaaaaattaaaaacgggtgatatgtacac 23801806  T
Q  362 gtgacacacatttaagtaaccaaaaatggatgtctccattgtg 404  Q
    |||  || |||||||||| | |||||||  |||||||||||||    
T  23801805 gtggaactcatttaagtaccaaaaaatgagtgtctccattgtg 23801763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 44441323 - 44441259
Alignment:
Q  348 agtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctct 412  Q
    |||||||||||||||||| |  ||||||||   |||||||| ||||||||||| |||| ||||||    
T  44441323 agtgatgtgtacgcgtgagatccatttaagaccccaaaaattgatgtctccatcgtggatgctct 44441259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 411
Target Start/End: Original strand, 7293000 - 7293245
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    ||||||||||||||||||||||||||||||| |   |  ||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||      
T  7293000 ggtcttatttaagacctccaactttaagcggggcttatacgcttttaatattaaaaaattgaaatgtaatgatataatgttattgatagttaattagtga 7293099  T
Q  261 atccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacg 360  Q
     ||| |||||| ||||||||||||||| ||| | |||||||      | | ||||||| || || | || |||||||||||||||||| ||||||| |||    
T  7293100 gtcctatttaaaaactttgtgtgagatttgggtcggaggga-----atgaatacttataaggtattactattaaaaaattataaatgaatgatgtgcacg 7293194  T
Q  361 cgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctc 411  Q
    ||||  || |||||||| | |||||||||||| |||| ||||||| |||||    
T  7293195 cgtgggacccatttaagaacccaaaaatggatatctctattgtggatgctc 7293245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 412
Target Start/End: Complemental strand, 41520990 - 41520785
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagata-tggattggaggga 301  Q
    |||||||| ||||||||||| ||||| || |||||| |||||||||||| ||| || | ||| ||||| ||||||||||||||||  ||| |||||||||    
T  41520990 ttttaatagtaaaaaattgatatgtaatggtataaagttattgatagttaatttgtgggtcccatttaggaactttgtgtgagatgctgggttggaggga 41520891  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
    || ||||     |||||||| ||   || |||||||||||||||| |||||||||||| ||||| || |||||||| | | |||||||||||||||||||    
T  41520890 ttgagtt-----cttattaggtaccactattaaaaaattataaataagtgatgtgtacacgtgaaacccatttaagaaccaaaaaatggatgtctccatt 41520796  T
Q  402 gtggttgctct 412  Q
    |||| ||||||    
T  41520795 gtggatgctct 41520785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 161 - 412
Target Start/End: Complemental strand, 18396687 - 18396442
Alignment:
Q  161 ggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||||| |||||||||||||| | || |  ||||||||||||||||||||||||| | |||||||||| ||||| |||||||||| || |    
T  18396687 ggtcttatttaagacccccaactttaagcgggg-ccgcatgcttttaatattaaaaaattgaaatattgtgatataaagttatttatagttgattggtgg 18396589  T
Q  261 atccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacg 360  Q
     ||| ||||||||  ||||||||||||     || ||||     | || |||| ||||||| || |  | ||||||||||||||||||| ||||||||||    
T  18396588 gtcccatttaagatttttgtgtgagatccaagttagagg-----aattgagtatttattaggtactattattaaaaaattataaatgagggatgtgtacg 18396494  T
Q  361 cgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctct 412  Q
    ||||  || |||||||  | ||||||||||||||||||||||| | ||||||    
T  18396493 cgtgtgacccatttaaaaacccaaaaatggatgtctccattgtagatgctct 18396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 1309891 - 1309790
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||| ||    
T  1309891 cttttaatattaaaaaattaaaatataatgatataaaattattgataattgattagtgtatccaatttaagaactttgtgtgagatttggattggagtga 1309792  T
Q  302 tt 303  Q
    ||    
T  1309791 tt 1309790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 203 - 303
Target Start/End: Complemental strand, 42951860 - 42951760
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||  |||||||||||||||||||||| ||  ||||||||||    
T  42951860 ttttaatattaaaaaattgaaatgtagtgatataaaattattgataattgattagtgggtctcatttaagaactttgtgtgagatctgagttggagggat 42951761  T
Q  303 t 303  Q
    |    
T  42951760 t 42951760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 400
Target Start/End: Complemental strand, 26675608 - 26675415
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||||||||| |||  ||||||||| ||||||||| ||||||||| | || |||||||||| ||| |||||||| ||  ||||| |||    
T  26675608 cttttaatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgagttggaagga 26675509  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccat 400  Q
         |||||| ||||| ||||| | || |||||||||||||||||||||||||||||   ||| || |||||| ||| |||||||||  |||||||||    
T  26675508 -----ttaagtgcttataagatactactattaaaaaattataaatgagtgatgtgtacatatgagacccatttaggtacccaaaaatgtgtgtctccat 26675415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 400
Target Start/End: Complemental strand, 26947216 - 26947023
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||||||||| |||  ||||||||| ||||||||| ||||||||| | || |||||||||| ||| |||||||| ||  ||||| |||    
T  26947216 cttttaatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgagttggaagga 26947117  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccat 400  Q
         |||||| ||||| ||||| | || |||||||||||||||||||||||||||||   ||| || |||||| ||| |||||||||  |||||||||    
T  26947116 -----ttaagtgcttataagatactactattaaaaaattataaatgagtgatgtgtacatatgagacccatttaggtacccaaaaatgtgtgtctccat 26947023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 15468251 - 15468166
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||||||||| || |||||||||||||||||||  |||||||| ||||| ||||||||| ||||||||||||    
T  15468251 cttttaatattaaaaaattgaaatttaatgatataaaattattgataaatgattagtggatcccatttaagaaatttgtgtgagat 15468166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 2375543 - 2375628
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||||||||||||||| |||| || | ||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  2375543 cttttaatattaaaaaattaaaatataattatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagat 2375628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 13420837 - 13420752
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||||||||| || | ||||||| |||||||||||||||||||   ||| |||||| |||||||||||||||    
T  13420837 cttttaatattaaaaaattgaaatataattatataaagttattgatagttgattagtgagtcccatttaacaactttgtgtgagat 13420752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 29558344 - 29558417
Alignment:
Q  214 aaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||    
T  29558344 aaaaattaaaatgtaatgatataaaattattgatagttgattattagatcttatttaagaaatttgtgtgagat 29558417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 412
Target Start/End: Original strand, 8228765 - 8228967
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggagggatta 304  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||||| || ||||  |||| | || | ||| |||||| |||  |||||||||       
T  8228765 taatattaaaaaaatgaaatgtaatgatatacaattattgatagttgattcgtggatcttattttaaaaatctgtatgagatgatgtgttggaggga--- 8228861  T
Q  305 agttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtg 404  Q
      || |||| |||||||||| |  |||||||||||||||||||| || | |||||  |||| |  | |||||||| | |||||| |||||||||||| ||    
T  8228862 --ttgagtatttattagatactattgttaaaaaattataaatgattggtttgtacatgtgagattcgtttaagtaccaaaaaatagatgtctccattatg 8228959  T
Q  405 gttgctct 412  Q
    | ||||||    
T  8228960 gatgctct 8228967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 388
Target Start/End: Original strand, 12593087 - 12593302
Alignment:
Q  169 ttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaa-ttgaaatgtagtgatataaaattattgatagttgattagtagatccaat 267  Q
    |||||||| |||| |||||||  |  |||| | ||||||||||||||||| || ||||||| ||||||||| ||||||||| ||||||||| | ||  ||    
T  12593087 ttaagacccccaattttaagcaaaacccacactcttttaatattaaaaaagttaaaatgtaatgatataaagttattgataattgattagttggtctcat 12593186  T
Q  268 ttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgaca 367  Q
    ||||||| ||||| |||||  |||   ||| ||   ||  | ||||||||||||||| | || ||||||| ||||||||||||||||||||| ||||  |    
T  12593187 ttaagaaatttgtttgagacgtgg---ggatgggggaa--tgagtacttattagatactactattaaaaagttataaatgagtgatgtgtacacgtgtga 12593281  T
Q  368 cacatttaagtaaccaaaaat 388  Q
    |  ||||||||| ||||||||    
T  12593282 ccaatttaagtatccaaaaat 12593302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 13486580 - 13486664
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||| |||||||| | | | |||||| ||||||||| |||||    
T  13486580 ttttaatattaaaaaattgaaatataatgatataaagttattgatagctgattagtgggttccatttaaaaactttgtgagagat 13486664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 355
Target Start/End: Complemental strand, 837873 - 837727
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagata-tggattggaggga 301  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||  |||||   |   ||||||||| ||| ||||||||| ||| ||| || ||    
T  837873 ttttaatattaaaatattgaaatgtaatgatataaaattatagatagtt--ttagtttgtttcatttaagaaatttatgtgagatactgggttgaagaga 837776  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgt 355  Q
         || ||| ||||||||||| |||||||||||| |||||||||||||||||    
T  837775 -----ttgagtgcttattagatattgctgttaaaaatttataaatgagtgatgt 837727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 403
Target Start/End: Original strand, 11200514 - 11200586
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgt 403  Q
    |||||||||||||||||||||||||||||||||||  | |||||||| | |||||||||  ||||| ||||||    
T  11200514 ttaaaaaattataaatgagtgatgtgtacgcgtgagtctcatttaagcatccaaaaatgagtgtcttcattgt 11200586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 11200732 - 11200816
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||| | ||||| | ||||||||||||||||||||||| | ||| ||  ||| ||||| ||||||||||||    
T  11200732 ttttaatattaaaaaattaatatgtaataatataaaattattgatagttgatcaataggtcttattcaagaattttgtgtgagat 11200816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 308
Target Start/End: Original strand, 3558768 - 3558874
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggga 301  Q
    |||||||||||||||||||| || || | || |||| ||||||||||||||||| | | ||| ||||| ||| ||||||||| ||  |||||||||||||    
T  3558768 ttttaatattaaaaaattgatatctaataatttaaagttattgatagttgattaatgggtcccatttatgaaatttgtgtgacatgctggattggaggga 3558867  T
Q  302 ttaagtt 308  Q
    || ||||    
T  3558868 ttgagtt 3558874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 34382600 - 34382542
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtaga 261  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||| |||||| ||||    
T  34382600 ttttaatattaaaatattaaaatgtaatgatataaaattattgatagatgattaataga 34382542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 35463354 - 35463304
Alignment:
Q  205 ttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatt 255  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  35463354 ttaatattaaaaaattgaaacataatgatataaaattattgatagttgatt 35463304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 6761496 - 6761441
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||| ||||||| ||||||||| || |||| |||||||||||    
T  6761496 ttttaatattaaaaaattaaaatgtaatgatataaagttgttgacagttgattagt 6761441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 42551207 - 42551124
Alignment:
Q  205 ttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt-agatccaatttaagaactttgtgtgagat 287  Q
    |||||||| ||||||| ||||||| | |||||||||||||||| |||||||| | || |  |||||||||| ||||||||||||    
T  42551207 ttaatatttaaaaattaaaatgtaatcatataaaattattgatggttgattactaagtttaaatttaagaaatttgtgtgagat 42551124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 413
Target Start/End: Original strand, 4935193 - 4935278
Alignment:
Q  328 ctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
    |||||||||| |||||||| |||||||||||| ||||| |  | |||||||| ||||||  |||| |||||||||| | |||||||    
T  4935193 ctgttaaaaagttataaataagtgatgtgtacacgtgaaattcgtttaagtatccaaaagaggatatctccattgtagatgctcta 4935278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 20420168 - 20420221
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagta 259  Q
    ||||| ||||||||||| || || ||||||||| ||||||||||||||||||||    
T  20420168 taataataaaaaattgatatataatgatataaagttattgatagttgattagta 20420221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 1666893 - 1666829
Alignment:
Q  210 attaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaa 274  Q
    ||||||||||||| || ||  |||||||| ||||||||||||||||| ||||| | |||||||||    
T  1666893 attaaaaaattgagatataacgatataaagttattgatagttgattattagattccatttaagaa 1666829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 285
Target Start/End: Complemental strand, 14642343 - 14642262
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgag 285  Q
    ||||||||||||||| || |||| || ||||||||| ||||||||||||||||| || |||  || |||||| |||| |||||    
T  14642343 ttttaatattaaaaa-ttaaaatataatgatataaagttattgatagttgattaatatatcatatataagaaatttgagtgag 14642262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 22579669 - 22579715
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatag 249  Q
    |||||||||||||||||| ||||||| | ||||||| ||||||||||    
T  22579669 ttttaatattaaaaaattaaaatgtaattatataaagttattgatag 22579715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 31111758 - 31111812
Alignment:
Q  203 ttttaatattaaaaaatt-gaaatgtagtgatataaaattattgatagttgatta 256  Q
    |||||||||||||||||| |||||||  |||||||||| |||| |||||||||||    
T  31111758 ttttaatattaaaaaatttgaaatgtgatgatataaaactattaatagttgatta 31111812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 5e-26; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 202 - 365
Target Start/End: Complemental strand, 46006206 - 46006049
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    ||||||||||||||||||| |||| || ||||||||| ||||||||||||||||| | | || |||||||||||||||||| |||| ||| |||||| ||    
T  46006206 cttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattactgggtcaaatttaagaactttgtgtaagatctgggttggagtga 46006107  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtga 365  Q
    || | |       ||||||| || | || ||||||||||||||||||||||||||||| |||||    
T  46006106 ttgaat------gttattaggtactactattaaaaaattataaatgagtgatgtgtacacgtga 46006049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 203 - 287
Target Start/End: Complemental strand, 33832068 - 33831984
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||| || |||| |||||| |||||||||||||||||||||| ||| | ||| ||||| ||||||||||||    
T  33832068 ttttaatattaaaaaattaaattgtaatgatatgaaattattgatagttgattagtggattccattaaagaaatttgtgtgagat 33831984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 397
Target Start/End: Complemental strand, 36902451 - 36902262
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    |||||||||||||||||| |||| || ||||||||| |||||||||||||||||||  ||   ||||||||| ||||| |||||| ||  ||| | | |     
T  36902451 ttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgaatttcatttaagaaatttgtttgagatctgagttgaaagta- 36902353  T
Q  303 taagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctc 397  Q
        || |||| |||||||||| | |||||||||||||| ||| |||| |||||| | ||||  || ||||||| || ||||||||| |||||||    
T  36902352 ----ttgagtatttattagatattactgttaaaaaattaaaaaagagttatgtgttcacgtgtgacccatttaaatatccaaaaatgaatgtctc 36902262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 312 - 401
Target Start/End: Original strand, 36619260 - 36619348
Alignment:
Q  312 tacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
    ||||||||||||| | || |||||||||||||||| |||||||||||| ||||| || |||||||||| | |||||| ||||||||||||    
T  36619260 tacttattagata-tactattaaaaaattataaatcagtgatgtgtacacgtgagacccatttaagtacctaaaaatagatgtctccatt 36619348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 26085063 - 26085167
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggat 302  Q
    ||||||||||||||||||||||| || || |||||| |||||||| |||||| |||   ||| ||||||||| ||| ||||| || ||| ||||||||||    
T  26085063 ttttaatattaaaaaattgaaatataatggtataaagttattgatggttgataagtgtgtcccatttaagaaatttatgtgaaatctgggttggagggat 26085162  T
Q  303 taagt 307  Q
    |||||    
T  26085163 taagt 26085167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 30595210 - 30595154
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  30595210 cttttagtattaaaaaatttaaatgtaatgatataaaattattgatagttgattagt 30595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 19900259 - 19900204
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  19900259 ttttaatattaaaaaattaaaatgtaatgatataaaattatttatagttgattagt 19900204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 47075675 - 47075620
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||    
T  47075675 ttttaatattaaaaaattgatatgtaatgatataaaattatagatagttgattagt 47075620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 377
Target Start/End: Original strand, 35539614 - 35539755
Alignment:
Q  231 gatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttattagatagtgctg 330  Q
    |||||||| ||||||||||||||||| | | ||| |||||||||||||||||||||| | | |||||| |||  |||   ||  ||||||| || | ||     
T  35539614 gatataaagttattgatagttgattaatgggtcccatttaagaactttgtgtgagatcttggttggagtgatcgagt---gt--ttattaggtactacta 35539708  T
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaag 377  Q
    |||||||||||||||| | |||||||||| ||||| || ||||||||    
T  35539709 ttaaaaaattataaataaatgatgtgtacacgtgagactcatttaag 35539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 55272770 - 55272855
Alignment:
Q  169 ttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgat 254  Q
    ||||||||||||  ||||||||||   | | | |||||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  55272770 ttaagacctccatttttaagcggaattcgcacacttttaatattaaaaaattgaaatataatgatataaagttattgatagttgat 55272855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 405
Target Start/End: Original strand, 41211980 - 41212175
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat-atggattggaggga 301  Q
    ||||||||||||||| || ||||||| ||||||||| ||||||||||||||||||||  ||  |||||||||  |||| ||||||  | |||||||||||    
T  41211980 ttttaatattaaaaa-ttaaaatgtaatgatataaagttattgatagttgattagtatgtctcatttaagaaacttgtatgagatgttcgattggaggga 41212078  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccatt 401  Q
         || | | |||||||| || | || ||| |||||||||||||||| |||||||   |||| || ||| ||||| ||||||||| | ||||||||||    
T  41212079 -----tttactgcttattaggtactactattacaaaattataaatgagttatgtgta-ttgtgagactcatctaagt-accaaaaataggtgtctccatt 41212171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 26085177 - 26085242
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctc 397  Q
    |||||||||||||||||| |||||||||| ||||| || ||||||||| |||||||||| |||||||    
T  26085177 ttaaaaaattataaatgaatgatgtgtacacgtgagacccatttaagt-accaaaaatgaatgtctc 26085242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 206 - 405
Target Start/End: Original strand, 46048882 - 46049078
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagt-agatccaatttaagaactttgtgtgagatatgga-ttggagggatt 303  Q
    ||||||||||||||||  ||||| || |||||| |||||||||||||||| || || |||| |||||||||||||||||||||   || |||||||||||    
T  46048882 taatattaaaaaattgttatgtaatggtataaagttattgatagttgatttgtgagttcca-tttaagaactttgtgtgagatgctgagttggagggatt 46048980  T
Q  304 aagttaagtacttattagatagtgctgttaaaa-aattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattg 402  Q
       |     ||||||||| || |  | |||||| |||||||||||||| |||| |||  |||| || ||||||||||   ||||||||| ||||||||||    
T  46048981 ggat-----acttattaggtactaatattaaaaaaattataaatgagtaatgtttacatgtgagacccatttaagtacttaaaaatggaggtctccattg 46049075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 405
Target Start/End: Complemental strand, 52744724 - 52744650
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtgg 405  Q
    |||||||||||||||| ||| |||||||| ||||| || ||||||||||   ||||||| |||||||||||||||    
T  52744724 ttaaaaaattataaataagtaatgtgtacacgtgagactcatttaagtagtaaaaaatgaatgtctccattgtgg 52744650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 54422721 - 54422805
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagata 288  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||| | ||  ||||||||| |||| || |||||    
T  54422721 ttttagtattaaaaaattgaa-tgtaatgatataaaattattgataattgattagtgggtctcatttaagaaatttgcgttagata 54422805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 402
Target Start/End: Complemental strand, 40242206 - 40242118
Alignment:
Q  314 cttattagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattg 402  Q
    |||||||| || | || |||||||||||||||| |||||| | ||| ||||| |||||||| |||| || ||||||||||| |||||||    
T  40242206 cttattaggtattactattaaaaaattataaataagtgatatatacacgtgagacacatttgagtaccctaaaatggatgtgtccattg 40242118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 410
Target Start/End: Original strand, 55222597 - 55222689
Alignment:
Q  318 ttagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgct 410  Q
    ||||||| | || |||||||||||||||||| |||| ||||| ||||| || |||||||| | | ||||||| ||||||||| ||||| ||||    
T  55222597 ttagatactactattaaaaaattataaatgactgatatgtacacgtgagacccatttaagaacctaaaaatgaatgtctccaatgtggatgct 55222689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 13755262 - 13755124
Alignment:
Q  219 ttgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttat 318  Q
    |||| ||||| ||||||||| ||||||||||||||||  | | ||| ||||||||| ||||||||||    || || |||||||| ||||     |||||    
T  13755262 ttgatatgtactgatataaagttattgatagttgatttttgggtcccatttaagaaatttgtgtgag--cagggttagagggattgagtt-----cttat 13755170  T
Q  319 tagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtg 364  Q
    ||  || | || ||||||||||||||||||||||||||||| ||||    
T  13755169 taagtactactattaaaaaattataaatgagtgatgtgtacacgtg 13755124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 13768663 - 13768525
Alignment:
Q  219 ttgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggagggattaagttaagtacttat 318  Q
    |||| ||||| ||||||||| |||||||||||||||| || | ||| ||||||||| ||||||| ||   ||  || |||||||| ||||     |||||    
T  13768663 ttgatatgtactgatataaagttattgatagttgatttgtgggtcccatttaagaaatttgtgtaagcagtg--ttagagggattgagtt-----cttat 13768571  T
Q  319 tagatagtgctgttaaaaaattataaatgagtgatgtgtacgcgtg 364  Q
    ||  || | || ||||||||||||||||||||||||||||| ||||    
T  13768570 taagtactactattaaaaaattataaatgagtgatgtgtacacgtg 13768525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 52995781 - 52995699
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtga 284  Q
    ||||||||||||||||| | |||  || ||||||||| ||||||||||||||||||||  ||  |||||| || |||||||||    
T  52995781 cttttaatattaaaaaaattaaagataatgatataaagttattgatagttgattagtatgtctcatttaacaaatttgtgtga 52995699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 3993568 - 3993620
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgatta 256  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||    
T  3993568 ttttaatattaaaa-attgaaatgtaatgatataaatttattgatggttgatta 3993620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 45603563 - 45603479
Alignment:
Q  206 taatattaaaaaattgaaatgtagtgatataaa---attattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||||||||||||||||||||||| ||||||||   | || ||||| ||||||||| | ||  |||||| || ||||||||||||    
T  45603563 taatattaaaaaattgaaatgtagggatataaagttaataatgatatttgattagtgggtcacatttaaaaaatttgtgtgagat 45603479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 36277894 - 36277835
Alignment:
Q  202 cttttaatattaaaaaattgaaatg---tagtgatataaaattattgatagttgattagt 258  Q
    |||||||||||||||||||||||||   || ||||||||| ||||||||| || ||||||    
T  36277894 cttttaatattaaaaaattgaaatgtaataatgatataaagttattgatattttattagt 36277835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 41211731 - 41211776
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgata 248  Q
    |||||||||||||||||||||| ||| ||||||||| ||| |||||    
T  41211731 ttttaatattaaaaaattgaaacgtaatgatataaagttaatgata 41211776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 287
Target Start/End: Complemental strand, 2242 - 2116
Alignment:
Q  158 caaggtcttatttaagacctccaactttaagcggagaccacgcgcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattag 257  Q
    |||||||||||  |||||| ||||||||||| || | || | | |||||||||||||||| |||||||  ||||||||||| ||||| ||||||||||||    
T  2242 caaggtcttat--aagacccccaactttaagtggggtccgcacacttttaatattaaaaa-ttgaaattcagtgatataaagttattaatagttgattag 2146  T
Q  258 tagatccaatttaagaactttgtgtgagat 287  Q
    |  |||| ||||||||||||||||||||||    
T  2145 tgaatcctatttaagaactttgtgtgagat 2116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 287
Target Start/End: Complemental strand, 3011 - 2927
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagat 287  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||| |||||||   ||| ||||||||| |||||| |||||    
T  3011 tttttatattaaaaaattgaaatataatgatataaaattattgatagtggattagtgtgtcctatttaagaaatttgtgagagat 2927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 6188 - 6131
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||||||||| || || | |||||||||||||||||||||||||||||    
T  6188 ttttaatattaaaaaattgatatataataatataaaattattgatagttgattagtag 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 6206 - 6149
Alignment:
Q  203 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtag 260  Q
    |||||||||||||||||||| || || | |||||||||||||||||||||||||||||    
T  6206 ttttaatattaaaaaattgatatataataatataaaattattgatagttgattagtag 6149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 202 - 356
Target Start/End: Complemental strand, 31930 - 31782
Alignment:
Q  202 cttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtagatccaatttaagaactttgtgtgagatatggattggaggga 301  Q
    |||||||||||||||| || |||| || | ||||||| |||||| |||||||||| |   ||| ||||||||||||||||||| || ||| ||||||       
T  31930 cttttaatattaaaaattt-aaatataatcatataaagttattgttagttgattacttagtcctatttaagaactttgtgtgaaatctgggttggag--- 31835  T
Q  302 ttaagttaagtacttattagatagtgctgttaaaaaattataaatgagtgatgtg 356  Q
     ||| || | | |||||| |||| | || |||| |||||||||||||||||||||    
T  31834 -taa-ttgaatgcttatttgatactactattaagaaattataaatgagtgatgtg 31782  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 413
Target Start/End: Complemental strand, 55782 - 55702
Alignment:
Q  331 ttaaaaaattataaatgagtgatgtgtacgcgtgacacacatttaagtaaccaaaaatggatgtctccattgtggttgctcta 413  Q
    ||||||||||||||||||||||||||||   |||| || |||||||||| ||||||||   |||||| ||||| | |||||||    
T  55782 ttaaaaaattataaatgagtgatgtgta--tgtgagactcatttaagtatccaaaaatttgtgtctctattgtagatgctcta 55702  T

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Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 359
Target Start/End: Original strand, 59703 - 59747
Alignment:
Q  315 ttattagatagtgctgttaaaaaattataaatgagtgatgtgtac 359  Q
    |||||||||| |||| |||||||||||||||| | ||||||||||    
T  59703 ttattagatattgctattaaaaaattataaataaatgatgtgtac 59747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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