View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2159_low_22 (Length: 227)
Name: NF2159_low_22
Description: NF2159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2159_low_22 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 32981860 - 32982077
Alignment:
| Q |
8 |
tgttaatatgaccctacataatataggtgatcaaacattcttaatgaatcacaattttgggtggagtcgtggagatgtgtacaatctctatttgtagatt |
107 |
Q |
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| T |
32981860 |
tgttaatatgaccctacataatataggtgatcaaacattcttaatgaatcacgattttgggtggagtcgtggagatgtgtacaatctccctttgtagatt |
32981959 |
T |
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| Q |
108 |
gattaattatccgttgttgctctcgataccagtcgcccaaaatatcaatcatagcacaacatgatgattcttatgatcaatattgatcatacataggttt |
207 |
Q |
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| T |
32981960 |
gattaattattcgttgttgctctcaatac--ttcgcccaaaatatcaatcatagcagaacatgttgattcttatgatcaatattgatcatacataggttt |
32982057 |
T |
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| Q |
208 |
tgatgattagcatgttaatt |
227 |
Q |
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|||||||||| ||||||||| |
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| T |
32982058 |
tgatgattagtatgttaatt |
32982077 |
T |
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