View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21600_high_16 (Length: 324)

Name: NF21600_high_16
Description: NF21600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21600_high_16
NF21600_high_16
[»] chr6 (26 HSPs)
chr6 (41-210)||(6090941-6091109)
chr6 (41-209)||(1946091-1946260)
chr6 (45-170)||(3879737-3879862)
chr6 (45-170)||(20768343-20768468)
chr6 (45-210)||(5627652-5627817)
chr6 (41-208)||(7054533-7054700)
chr6 (44-170)||(33892810-33892936)
chr6 (44-170)||(33619090-33619219)
chr6 (44-170)||(7234830-7234959)
chr6 (45-164)||(4318626-4318745)
chr6 (72-171)||(21016915-21017014)
chr6 (44-170)||(29182424-29182547)
chr6 (44-170)||(6089163-6089282)
chr6 (44-170)||(8513488-8513607)
chr6 (111-165)||(33724062-33724116)
chr6 (1-42)||(3879892-3879933)
chr6 (1-42)||(21017065-21017106)
chr6 (1-42)||(1946024-1946065)
chr6 (1-42)||(5627581-5627622)
chr6 (1-42)||(8513418-8513459)
chr6 (1-42)||(30353311-30353352)
chr6 (1-42)||(6091135-6091177)
chr6 (1-42)||(4318775-4318816)
chr6 (9-42)||(7055168-7055201)
chr6 (1-42)||(7234988-7235029)
chr6 (5-42)||(29182358-29182395)
[»] chr2 (72 HSPs)
chr2 (45-170)||(2325195-2325320)
chr2 (46-210)||(4763893-4764057)
chr2 (44-212)||(41961100-41961267)
chr2 (44-171)||(26357837-26357964)
chr2 (44-170)||(7006755-7006881)
chr2 (45-170)||(11366197-11366323)
chr2 (44-170)||(18494098-18494224)
chr2 (49-170)||(33709049-33709170)
chr2 (45-170)||(5881790-5881915)
chr2 (41-170)||(19289140-19289269)
chr2 (46-163)||(19500739-19500856)
chr2 (45-170)||(33660194-33660319)
chr2 (45-170)||(39167186-39167311)
chr2 (45-170)||(43648062-43648187)
chr2 (45-170)||(35959157-35959278)
chr2 (44-170)||(41465761-41465887)
chr2 (45-210)||(4167183-4167347)
chr2 (55-216)||(19424414-19424574)
chr2 (45-210)||(33550760-33550929)
chr2 (211-301)||(2324557-2324647)
chr2 (41-142)||(27349793-27349894)
chr2 (44-170)||(44913924-44914053)
chr2 (44-170)||(43770665-43770791)
chr2 (41-170)||(31862109-31862238)
chr2 (44-170)||(31570551-31570677)
chr2 (48-170)||(13711723-13711845)
chr2 (41-170)||(37905967-37906097)
chr2 (87-209)||(33902317-33902439)
chr2 (44-170)||(41051117-41051243)
chr2 (44-136)||(4478625-4478717)
chr2 (45-208)||(3177200-3177362)
chr2 (45-169)||(29241963-29242080)
chr2 (72-170)||(18257355-18257453)
chr2 (232-311)||(2337804-2337883)
chr2 (44-137)||(4263926-4264019)
chr2 (57-170)||(41463407-41463520)
chr2 (220-311)||(2344686-2344777)
chr2 (46-120)||(44286211-44286285)
chr2 (48-123)||(19314108-19314186)
chr2 (122-170)||(45328028-45328076)
chr2 (1-42)||(2325350-2325391)
chr2 (1-42)||(3177129-3177170)
chr2 (1-42)||(17071709-17071750)
chr2 (3-42)||(4763823-4763862)
chr2 (1-42)||(17054068-17054109)
chr2 (1-42)||(4167112-4167153)
chr2 (1-42)||(11366353-11366394)
chr2 (113-158)||(17053960-17054005)
chr2 (113-158)||(17071601-17071646)
chr2 (41-78)||(17071646-17071683)
chr2 (1-42)||(19289295-19289336)
chr2 (1-42)||(29242110-29242151)
chr2 (1-42)||(35959086-35959127)
chr2 (1-42)||(41961030-41961071)
chr2 (1-42)||(44286139-44286180)
chr2 (5-42)||(44913858-44913895)
chr2 (42-78)||(17054005-17054041)
chr2 (45-89)||(45327981-45328025)
chr2 (1-34)||(4264057-4264090)
chr2 (1-42)||(18258259-18258300)
chr2 (1-42)||(19424600-19424641)
chr2 (6-43)||(19500886-19500923)
chr2 (1-42)||(31862042-31862083)
chr2 (44-89)||(36642248-36642293)
chr2 (1-42)||(43648217-43648258)
chr2 (1-37)||(36642178-36642214)
chr2 (3-42)||(33902258-33902297)
chr2 (1-43)||(26357767-26357809)
chr2 (1-31)||(33550969-33550999)
chr2 (1-42)||(31570706-31570747)
chr2 (5-42)||(37905904-37905941)
chr2 (1-42)||(41465691-41465732)
[»] chr7 (83 HSPs)
chr7 (41-210)||(18797559-18797727)
chr7 (44-210)||(29173757-29173922)
chr7 (41-208)||(24211973-24212140)
chr7 (41-168)||(30055759-30055886)
chr7 (45-170)||(37703298-37703423)
chr7 (45-169)||(37110110-37110234)
chr7 (41-212)||(7335025-7335195)
chr7 (44-170)||(9355626-9355752)
chr7 (44-170)||(22687466-22687592)
chr7 (41-170)||(32820853-32820982)
chr7 (45-170)||(46480929-46481054)
chr7 (45-169)||(17842385-17842509)
chr7 (45-207)||(23111428-23111589)
chr7 (44-170)||(6546754-6546880)
chr7 (44-170)||(26587892-26588018)
chr7 (44-170)||(31520541-31520667)
chr7 (45-212)||(35353344-35353510)
chr7 (41-170)||(31578864-31578993)
chr7 (41-164)||(27283976-27284100)
chr7 (44-170)||(8861520-8861646)
chr7 (44-170)||(15612559-15612685)
chr7 (44-165)||(44411345-44411466)
chr7 (44-170)||(5657280-5657407)
chr7 (41-205)||(10481837-10482000)
chr7 (45-164)||(11071439-11071558)
chr7 (44-209)||(32432687-32432851)
chr7 (44-170)||(37347256-37347382)
chr7 (45-170)||(10359014-10359139)
chr7 (44-169)||(12390450-12390575)
chr7 (44-213)||(48928055-48928223)
chr7 (44-163)||(37704417-37704536)
chr7 (46-171)||(25691343-25691468)
chr7 (45-170)||(26980542-26980667)
chr7 (45-140)||(12165979-12166074)
chr7 (44-170)||(41764878-41765004)
chr7 (69-170)||(43925355-43925456)
chr7 (54-170)||(15672559-15672675)
chr7 (45-170)||(4583155-4583280)
chr7 (45-152)||(34361996-34362103)
chr7 (45-170)||(32593007-32593131)
chr7 (97-213)||(38258867-38258982)
chr7 (45-170)||(21991872-21991988)
chr7 (49-115)||(33688117-33688183)
chr7 (45-170)||(44598902-44599027)
chr7 (1-42)||(10481770-10481811)
chr7 (1-42)||(23111357-23111398)
chr7 (1-42)||(38258710-38258751)
chr7 (1-39)||(10359172-10359210)
chr7 (1-43)||(27283909-27283951)
chr7 (41-99)||(38053693-38053751)
chr7 (1-42)||(4583084-4583125)
chr7 (1-42)||(9355781-9355822)
chr7 (1-42)||(15612714-15612755)
chr7 (1-42)||(15672717-15672758)
chr7 (1-42)||(18797492-18797533)
chr7 (1-42)||(21991801-21991842)
chr7 (1-42)||(30055692-30055733)
chr7 (1-42)||(32432617-32432658)
chr7 (1-42)||(37110039-37110080)
chr7 (1-42)||(37704322-37704363)
chr7 (1-42)||(41765033-41765074)
chr7 (1-42)||(43686205-43686246)
chr7 (41-80)||(38258777-38258816)
chr7 (4-42)||(11071374-11071412)
chr7 (45-99)||(43686276-43686330)
chr7 (1-42)||(17842539-17842580)
chr7 (1-42)||(25691499-25691540)
chr7 (1-42)||(31579019-31579060)
chr7 (1-42)||(32821008-32821049)
chr7 (1-42)||(37703453-37703494)
chr7 (1-42)||(44598831-44598872)
chr7 (1-37)||(26588044-26588080)
chr7 (7-42)||(37347192-37347227)
chr7 (11-42)||(46481084-46481115)
chr7 (12-42)||(31520696-31520726)
chr7 (12-42)||(38053637-38053667)
chr7 (1-42)||(7334959-7335000)
chr7 (9-42)||(24211914-24211947)
chr7 (1-42)||(35353273-35353314)
chr7 (135-171)||(12166215-12166251)
chr7 (1-33)||(22687404-22687436)
chr7 (52-116)||(27421219-27421283)
chr7 (1-33)||(27421344-27421376)
[»] chr4 (81 HSPs)
chr4 (41-171)||(1815558-1815688)
chr4 (41-211)||(19440433-19440602)
chr4 (45-210)||(32912365-32912530)
chr4 (41-210)||(34361277-34361446)
chr4 (50-212)||(879332-879493)
chr4 (41-210)||(25184370-25184538)
chr4 (41-168)||(37663568-37663695)
chr4 (44-170)||(7703769-7703895)
chr4 (44-170)||(46887983-46888109)
chr4 (45-171)||(50764981-50765107)
chr4 (45-170)||(3042880-3043005)
chr4 (45-168)||(19089280-19089403)
chr4 (44-171)||(37775918-37776045)
chr4 (45-212)||(6864296-6864462)
chr4 (45-171)||(33341659-33341785)
chr4 (41-171)||(55477715-55477845)
chr4 (45-211)||(32579707-32579872)
chr4 (41-170)||(50697499-50697628)
chr4 (46-170)||(35025392-35025515)
chr4 (45-210)||(49376228-49376392)
chr4 (44-170)||(23761331-23761457)
chr4 (41-210)||(35020817-35020989)
chr4 (45-170)||(7152029-7152154)
chr4 (45-170)||(30002466-30002591)
chr4 (45-170)||(33816341-33816466)
chr4 (44-167)||(34947923-34948046)
chr4 (44-170)||(39400268-39400394)
chr4 (44-170)||(47254000-47254126)
chr4 (45-170)||(17272225-17272350)
chr4 (45-170)||(28002811-28002936)
chr4 (45-170)||(29584025-29584150)
chr4 (47-170)||(32592347-32592470)
chr4 (44-170)||(37287988-37288115)
chr4 (44-170)||(4598242-4598368)
chr4 (44-170)||(36493514-36493640)
chr4 (44-170)||(55240930-55241056)
chr4 (55-170)||(23431826-23431941)
chr4 (45-171)||(27396877-27397001)
chr4 (45-170)||(25700881-25701006)
chr4 (45-171)||(26896347-26896475)
chr4 (44-170)||(4205244-4205370)
chr4 (41-170)||(46883939-46884064)
chr4 (44-169)||(9139489-9139612)
chr4 (44-170)||(17167973-17168099)
chr4 (44-212)||(5047750-5047917)
chr4 (44-170)||(17173550-17173676)
chr4 (41-170)||(42199986-42200116)
chr4 (90-170)||(38012568-38012648)
chr4 (75-167)||(4934040-4934133)
chr4 (215-310)||(36798477-36798572)
chr4 (1-42)||(1815491-1815532)
chr4 (1-42)||(3042809-3042850)
chr4 (1-42)||(17167903-17167944)
chr4 (1-42)||(17173480-17173521)
chr4 (1-42)||(35021015-35021056)
chr4 (1-42)||(37663721-37663762)
chr4 (45-88)||(56050191-56050234)
chr4 (1-43)||(25184303-25184345)
chr4 (1-42)||(6864225-6864266)
chr4 (1-42)||(19089433-19089474)
chr4 (1-42)||(32912560-32912601)
chr4 (1-42)||(42199919-42199960)
chr4 (1-42)||(47253930-47253971)
chr4 (44-99)||(38012114-38012169)
chr4 (4-42)||(33816496-33816534)
chr4 (1-42)||(879528-879569)
chr4 (1-42)||(4934182-4934223)
chr4 (1-42)||(28002966-28003007)
chr4 (1-42)||(33341588-33341629)
chr4 (1-42)||(50697431-50697472)
chr4 (1-42)||(55477871-55477912)
chr4 (2-42)||(35025576-35025616)
chr4 (2-42)||(49376158-49376198)
chr4 (1-37)||(55241090-55241126)
chr4 (7-42)||(36493669-36493704)
chr4 (5-39)||(25701039-25701073)
chr4 (1-42)||(7703699-7703740)
chr4 (9-42)||(26896285-26896318)
chr4 (1-42)||(34361472-34361513)
chr4 (1-42)||(38012044-38012085)
chr4 (1-42)||(34948075-34948118)
[»] chr3 (86 HSPs)
chr3 (41-170)||(40552058-40552187)
chr3 (41-210)||(46297522-46297690)
chr3 (44-169)||(11357181-11357306)
chr3 (41-210)||(26941020-26941188)
chr3 (45-210)||(22622478-22622642)
chr3 (44-212)||(4015710-4015877)
chr3 (41-168)||(42505876-42506003)
chr3 (41-211)||(21009560-21009730)
chr3 (44-171)||(1089945-1090071)
chr3 (45-209)||(39282904-39283067)
chr3 (46-210)||(29099599-29099763)
chr3 (45-212)||(33378543-33378709)
chr3 (45-170)||(47481774-47481900)
chr3 (44-210)||(43975652-43975817)
chr3 (41-170)||(48355189-48355318)
chr3 (44-169)||(53228952-53229077)
chr3 (45-169)||(52040722-52040846)
chr3 (44-171)||(7327280-7327407)
chr3 (47-170)||(21193861-21193984)
chr3 (44-170)||(33698404-33698530)
chr3 (44-170)||(44186316-44186442)
chr3 (45-171)||(44891749-44891875)
chr3 (41-170)||(54506055-54506185)
chr3 (44-169)||(22445865-22445990)
chr3 (45-170)||(22451220-22451345)
chr3 (44-210)||(37157959-37158124)
chr3 (49-210)||(37203324-37203484)
chr3 (44-170)||(24707914-24708040)
chr3 (45-169)||(3362507-3362631)
chr3 (41-212)||(51212535-51212699)
chr3 (44-170)||(14586479-14586604)
chr3 (44-210)||(36012390-36012556)
chr3 (45-170)||(2008184-2008316)
chr3 (44-170)||(40936224-40936350)
chr3 (41-170)||(4761447-4761576)
chr3 (45-170)||(32373722-32373846)
chr3 (44-171)||(25579990-25580117)
chr3 (41-140)||(46994490-46994589)
chr3 (44-142)||(34133186-34133284)
chr3 (41-170)||(3654998-3655130)
chr3 (46-171)||(29164062-29164180)
chr3 (92-170)||(20373062-20373140)
chr3 (44-170)||(24488761-24488887)
chr3 (44-163)||(27480164-27480287)
chr3 (49-170)||(50475067-50475195)
chr3 (45-142)||(38591950-38592047)
chr3 (38-170)||(11356957-11357081)
chr3 (41-124)||(54828546-54828629)
chr3 (44-108)||(45174757-45174821)
chr3 (46-108)||(11835494-11835556)
chr3 (1-42)||(34133116-34133157)
chr3 (1-42)||(37157888-37157929)
chr3 (1-42)||(39282833-39282874)
chr3 (1-42)||(42506029-42506070)
chr3 (1-42)||(46297716-46297757)
chr3 (3-42)||(37203250-37203289)
chr3 (1-39)||(3362436-3362474)
chr3 (44-170)||(11467075-11467187)
chr3 (44-106)||(53811597-53811659)
chr3 (1-42)||(7327436-7327477)
chr3 (1-42)||(22622672-22622713)
chr3 (1-42)||(47481703-47481744)
chr3 (7-42)||(48355128-48355163)
chr3 (5-39)||(1089879-1089913)
chr3 (4-42)||(11467008-11467046)
chr3 (45-99)||(43348509-43348563)
chr3 (4-42)||(52040876-52040914)
chr3 (5-42)||(4761602-4761639)
chr3 (9-42)||(21009756-21009789)
chr3 (1-42)||(24708069-24708110)
chr3 (1-42)||(25579920-25579961)
chr3 (1-42)||(33698334-33698375)
chr3 (1-42)||(44891678-44891719)
chr3 (5-42)||(46994615-46994652)
chr3 (1-42)||(53176235-53176276)
chr3 (5-38)||(53229110-53229143)
chr3 (9-42)||(54505996-54506029)
chr3 (2-42)||(2008114-2008154)
chr3 (123-170)||(35844577-35844624)
chr3 (12-42)||(11357335-11357365)
chr3 (1-42)||(24488916-24488957)
chr3 (1-42)||(32373651-32373692)
chr3 (1-42)||(54828655-54828696)
chr3 (1-33)||(4015641-4015673)
chr3 (6-42)||(11357104-11357140)
chr3 (6-42)||(20373198-20373234)
[»] chr5 (85 HSPs)
chr5 (38-170)||(22255436-22255568)
chr5 (44-170)||(31786435-31786561)
chr5 (44-169)||(699410-699535)
chr5 (44-169)||(25889630-25889755)
chr5 (41-170)||(24886344-24886473)
chr5 (45-170)||(35826275-35826400)
chr5 (45-170)||(38528026-38528151)
chr5 (44-210)||(35511232-35511397)
chr5 (44-170)||(15992329-15992455)
chr5 (44-170)||(39573071-39573197)
chr5 (45-170)||(2888234-2888359)
chr5 (41-169)||(5830149-5830278)
chr5 (45-170)||(35504626-35504751)
chr5 (50-170)||(22973871-22973991)
chr5 (44-210)||(22981053-22981218)
chr5 (44-170)||(8437225-8437351)
chr5 (44-170)||(33908493-33908618)
chr5 (41-170)||(31705401-31705530)
chr5 (41-170)||(7208653-7208782)
chr5 (45-170)||(8741674-8741799)
chr5 (45-170)||(25669837-25669962)
chr5 (45-170)||(42342982-42343107)
chr5 (45-171)||(7693482-7693608)
chr5 (44-170)||(19120119-19120245)
chr5 (44-170)||(22019883-22020009)
chr5 (45-170)||(17157820-17157945)
chr5 (45-170)||(27330565-27330690)
chr5 (45-210)||(40133646-40133810)
chr5 (45-210)||(36867023-36867187)
chr5 (44-170)||(25500715-25500841)
chr5 (44-170)||(28416340-28416466)
chr5 (44-169)||(12910615-12910740)
chr5 (45-170)||(35934157-35934282)
chr5 (41-170)||(43308449-43308578)
chr5 (44-170)||(9200484-9200610)
chr5 (45-170)||(5837816-5837941)
chr5 (45-211)||(36860685-36860850)
chr5 (44-134)||(13956187-13956277)
chr5 (44-170)||(32563400-32563526)
chr5 (83-169)||(43254154-43254240)
chr5 (45-170)||(14409130-14409255)
chr5 (46-170)||(8466988-8467112)
chr5 (45-170)||(23116019-23116136)
chr5 (44-170)||(26269069-26269195)
chr5 (45-170)||(15724749-15724874)
chr5 (44-135)||(1428983-1429077)
chr5 (45-171)||(30969112-30969238)
chr5 (72-211)||(27318237-27318376)
chr5 (44-171)||(21088557-21088681)
chr5 (92-170)||(14919328-14919405)
chr5 (110-170)||(23954591-23954651)
chr5 (1-43)||(35504555-35504597)
chr5 (1-42)||(23116166-23116207)
chr5 (1-42)||(27318431-27318472)
chr5 (1-42)||(38528181-38528222)
chr5 (1-43)||(7208807-7208849)
chr5 (1-43)||(17157974-17158016)
chr5 (1-42)||(5830082-5830123)
chr5 (1-42)||(12910545-12910586)
chr5 (1-42)||(19120049-19120090)
chr5 (1-42)||(36860614-36860655)
chr5 (1-42)||(36866952-36866993)
chr5 (1-42)||(40133575-40133616)
chr5 (1-36)||(6824429-6824464)
chr5 (4-42)||(5837748-5837786)
chr5 (1-42)||(699340-699381)
chr5 (1-42)||(21088710-21088751)
chr5 (1-42)||(22980983-22981024)
chr5 (1-42)||(23954733-23954774)
chr5 (1-42)||(26268264-26268305)
chr5 (1-42)||(30969268-30969309)
chr5 (1-42)||(31786590-31786631)
chr5 (1-42)||(33908423-33908464)
chr5 (1-42)||(35934086-35934127)
chr5 (2-42)||(8437156-8437196)
chr5 (1-37)||(8741835-8741871)
chr5 (12-42)||(1429106-1429136)
chr5 (1-43)||(22974025-22974067)
chr5 (12-42)||(24886288-24886318)
chr5 (1-42)||(13956306-13956347)
chr5 (1-42)||(14919472-14919513)
chr5 (1-42)||(15992484-15992525)
chr5 (1-42)||(22255372-22255413)
chr5 (1-42)||(25500870-25500911)
chr5 (49-109)||(6824331-6824391)
[»] chr1 (86 HSPs)
chr1 (41-210)||(32216308-32216476)
chr1 (41-170)||(15383186-15383316)
chr1 (44-170)||(2960004-2960130)
chr1 (41-171)||(30254676-30254806)
chr1 (45-170)||(11742162-11742287)
chr1 (50-210)||(10922989-10923148)
chr1 (45-171)||(23999604-23999731)
chr1 (38-210)||(32267284-32267455)
chr1 (44-171)||(39393640-39393767)
chr1 (44-220)||(34012128-34012302)
chr1 (44-169)||(16415902-16416027)
chr1 (41-169)||(19899563-19899692)
chr1 (41-170)||(37451538-37451667)
chr1 (45-169)||(27227280-27227404)
chr1 (44-170)||(1547527-1547653)
chr1 (44-170)||(14758288-14758414)
chr1 (44-170)||(27532776-27532901)
chr1 (45-170)||(46931666-46931792)
chr1 (45-167)||(47682291-47682413)
chr1 (41-210)||(8222381-8222549)
chr1 (45-170)||(48353799-48353924)
chr1 (45-169)||(27266995-27267119)
chr1 (41-171)||(25160885-25161016)
chr1 (44-170)||(3535179-3535305)
chr1 (41-170)||(27763104-27763234)
chr1 (41-210)||(1359691-1359858)
chr1 (45-170)||(9902848-9902973)
chr1 (45-170)||(15168353-15168478)
chr1 (45-170)||(28564577-28564702)
chr1 (44-210)||(47279445-47279611)
chr1 (44-170)||(3309409-3309536)
chr1 (44-171)||(38823470-38823597)
chr1 (41-211)||(15752282-15752451)
chr1 (45-170)||(28769910-28770035)
chr1 (49-169)||(4330542-4330662)
chr1 (46-169)||(27563700-27563823)
chr1 (44-170)||(238307-238433)
chr1 (45-170)||(51129116-51129239)
chr1 (44-169)||(21289856-21289981)
chr1 (44-170)||(7078857-7078983)
chr1 (41-164)||(30326751-30326875)
chr1 (45-171)||(42721293-42721419)
chr1 (45-169)||(10181802-10181927)
chr1 (44-170)||(31621342-31621469)
chr1 (45-170)||(22170968-22171093)
chr1 (41-136)||(37618729-37618824)
chr1 (45-170)||(31962873-31962999)
chr1 (49-142)||(40885074-40885167)
chr1 (44-169)||(41926413-41926537)
chr1 (41-150)||(18422904-18423006)
chr1 (1-42)||(238462-238503)
chr1 (1-42)||(10181957-10181998)
chr1 (1-42)||(18422837-18422878)
chr1 (1-42)||(22170897-22170938)
chr1 (1-42)||(32216241-32216282)
chr1 (98-170)||(33725405-33725478)
chr1 (110-170)||(48620911-48620971)
chr1 (1-42)||(4330467-4330508)
chr1 (1-42)||(8222314-8222355)
chr1 (1-42)||(9903003-9903044)
chr1 (1-42)||(15383119-15383160)
chr1 (1-42)||(19899718-19899759)
chr1 (1-42)||(23999533-23999574)
chr1 (1-42)||(27267149-27267190)
chr1 (1-42)||(30326901-30326942)
chr1 (1-42)||(46931595-46931636)
chr1 (1-42)||(2959934-2959975)
chr1 (1-42)||(10922913-10922954)
chr1 (1-42)||(15752215-15752256)
chr1 (1-42)||(25160818-25160859)
chr1 (1-42)||(27227434-27227475)
chr1 (1-42)||(27763260-27763301)
chr1 (5-42)||(28769843-28769880)
chr1 (1-42)||(32267220-32267261)
chr1 (1-42)||(37451471-37451512)
chr1 (1-42)||(38759719-38759760)
chr1 (1-42)||(38823400-38823441)
chr1 (1-42)||(47682443-47682484)
chr1 (1-42)||(51129045-51129086)
chr1 (45-101)||(38759790-38759846)
chr1 (1-42)||(7079012-7079053)
chr1 (1-42)||(27532930-27532971)
chr1 (1-42)||(33725549-33725590)
chr1 (1-42)||(47279375-47279416)
chr1 (1-37)||(1547465-1547501)
chr1 (1-41)||(30254609-30254649)
[»] chr8 (64 HSPs)
chr8 (41-210)||(1149398-1149566)
chr8 (44-210)||(16446641-16446806)
chr8 (41-170)||(23854236-23854365)
chr8 (41-210)||(43643361-43643529)
chr8 (44-169)||(4132492-4132617)
chr8 (45-170)||(5299751-5299876)
chr8 (41-170)||(7890762-7890891)
chr8 (50-170)||(37970324-37970444)
chr8 (44-171)||(24823198-24823325)
chr8 (41-171)||(16223119-16223249)
chr8 (49-212)||(38644242-38644404)
chr8 (45-170)||(1953793-1953918)
chr8 (45-170)||(12587842-12587967)
chr8 (45-170)||(27082643-27082768)
chr8 (46-212)||(1205188-1205353)
chr8 (44-167)||(466091-466214)
chr8 (41-212)||(8803580-8803751)
chr8 (44-171)||(34895221-34895348)
chr8 (44-170)||(35859193-35859319)
chr8 (44-210)||(11727283-11727449)
chr8 (50-170)||(35459516-35459636)
chr8 (12-170)||(33198031-33198187)
chr8 (45-170)||(34951862-34951987)
chr8 (45-170)||(44869757-44869882)
chr8 (54-168)||(6098320-6098434)
chr8 (45-210)||(33906472-33906634)
chr8 (41-139)||(1149756-1149854)
chr8 (41-211)||(10554969-10555138)
chr8 (45-170)||(30654388-30654513)
chr8 (44-170)||(36694771-36694897)
chr8 (45-170)||(40862679-40862805)
chr8 (41-170)||(31933691-31933820)
chr8 (45-171)||(39098923-39099049)
chr8 (45-170)||(18259339-18259464)
chr8 (86-209)||(41362723-41362845)
chr8 (44-142)||(9864407-9864505)
chr8 (45-171)||(12876370-12876496)
chr8 (85-171)||(43025974-43026060)
chr8 (1-43)||(1149591-1149633)
chr8 (1-42)||(6098478-6098519)
chr8 (1-42)||(9864337-9864378)
chr8 (1-42)||(36694926-36694967)
chr8 (1-42)||(37970479-37970520)
chr8 (45-99)||(13307882-13307936)
chr8 (1-43)||(40862608-40862650)
chr8 (1-43)||(43643554-43643596)
chr8 (1-42)||(1205116-1205157)
chr8 (1-42)||(4132646-4132687)
chr8 (1-42)||(13307812-13307853)
chr8 (1-42)||(16446835-16446876)
chr8 (1-42)||(27082798-27082839)
chr8 (1-42)||(30654543-30654584)
chr8 (5-39)||(1953951-1953985)
chr8 (1-42)||(12876298-12876340)
chr8 (1-42)||(7890917-7890958)
chr8 (1-42)||(11727213-11727254)
chr8 (1-42)||(16223052-16223093)
chr8 (1-42)||(41910948-41910989)
chr8 (1-42)||(43025891-43025932)
chr8 (45-106)||(34463734-34463792)
chr8 (1-34)||(5299914-5299947)
chr8 (1-42)||(8803777-8803818)
chr8 (1-42)||(23854391-23854432)
chr8 (5-34)||(44869690-44869719)
[»] scaffold0002 (6 HSPs)
scaffold0002 (41-170)||(408228-408357)
scaffold0002 (45-171)||(93899-94024)
scaffold0002 (69-170)||(413-514)
scaffold0002 (1-42)||(324-365)
scaffold0002 (1-42)||(94337-94378)
scaffold0002 (1-42)||(408383-408424)
[»] scaffold0291 (2 HSPs)
scaffold0291 (41-168)||(8144-8271)
scaffold0291 (1-42)||(8077-8118)
[»] scaffold0318 (2 HSPs)
scaffold0318 (44-171)||(12169-12295)
scaffold0318 (1-42)||(12099-12140)
[»] scaffold0061 (2 HSPs)
scaffold0061 (45-170)||(44217-44342)
scaffold0061 (1-42)||(44147-44187)
[»] scaffold0017 (2 HSPs)
scaffold0017 (45-170)||(154445-154570)
scaffold0017 (1-42)||(154600-154640)
[»] scaffold0022 (2 HSPs)
scaffold0022 (41-170)||(145814-145944)
scaffold0022 (1-42)||(145970-146011)
[»] scaffold0008 (2 HSPs)
scaffold0008 (44-170)||(267545-267662)
scaffold0008 (1-42)||(267474-267516)
[»] scaffold0009 (1 HSPs)
scaffold0009 (63-129)||(100994-101058)


Alignment Details
Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 6091109 - 6090941
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6091109 attcaaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 6091010  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || ||||||||||||||||||||||||||||       || |||||||||||||||||||| ||||||||    
T  6091009 atcaaacattaagatcaaaattaactttttt-aaaaaagtaagttttctgactgcaccgtagaagctccc 6090941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 41 - 209
Target Start/End: Original strand, 1946091 - 1946260
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  1946091 attccaacgataaaatagtacatgtaagtccaagatgttacaagcattattagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatg 1946190  T
Q  140 aataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcc 209  Q
    ||| ||||||||| ||||||||||||||||||       |||||||| |||||||||||||| |||||||    
T  1946191 aatcaaacattaaaatcaaaattaacttttttcaaaaaagtcagtttcctgactgcaccgtagaagctcc 1946260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 3879862 - 3879737
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |    
T  3879862 caacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatca 3879763  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  3879762 aacattaagattaaaattaacttttt 3879737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 20768343 - 20768468
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||      
T  20768343 caacgataaaatagtacatgtaagtccaaggtgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattg 20768442  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  20768443 aacattaagatcaaaattaacttttt 20768468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 5627652 - 5627817
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||     
T  5627652 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactaggtgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 5627751  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||| ||||| ||||||||||| ||||||        ||||||| |||||||||||||| ||||||||    
T  5627752 aaatattaaaatcaaaattaa-tttttttaaaaaaatcagtttcctgactgcaccgtagaagctccc 5627817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 41 - 208
Target Start/End: Complemental strand, 7054700 - 7054533
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    |||||||||||||||||||| |||||| ||||||||||||||| |||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||    
T  7054700 attccaacgataaaatagtaactgtaagtccaagatgttgcaaacattactaaatgaatatactattgatcattaatcattaatcaacaatttaaagatg 7054601  T
Q  140 aataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctc 208  Q
    ||| ||||||||| ||||||||||||| ||||       ||||||||  ||||||||||||||||||||    
T  7054600 aatcaaacattaaaatcaaaattaact-ttttcaaaaaagtcagtttcttgactgcaccgtaaaagctc 7054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 33892936 - 33892810
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||| |||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||     
T  33892936 ccaacaataaaatagtacatgtaagtccaagatgttgcaaacattactaaatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatc 33892837  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||| | ||||||||||||||    
T  33892836 aaacattaaggttaaaattaacttttt 33892810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 33619090 - 33619219
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattatta---atcagtaatcaacaatttaaaaatga 140  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||   ||||| ||||||||||||||||||||    
T  33619090 ccaacgataaaatagtacatgtaagtccaatatgttgcaagcattactagatgaattactattgatcattaatgatcagcaatcaacaatttaaaaatga 33619189  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    ||  ||||||||||| ||||||||||||||    
T  33619190 atcgaacattaagattaaaattaacttttt 33619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 7234959 - 7234830
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaat---cagtaatcaacaatttaaaaatga 140  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||   ||  |||||||||||||||||| |    
T  7234959 ccaacgataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaacaacaatcaacaatttaaaaataa 7234860  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    ||  ||||||||||||||||||||||||||    
T  7234859 atcgaacattaagatcaaaattaacttttt 7234830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 45 - 164
Target Start/End: Complemental strand, 4318745 - 4318626
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||| |||||||||  | || ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| |    
T  4318745 caacgatgaaatagtacgggaaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaataaatca 4318646  T
Q  145 aacattaagatcaaaattaa 164  Q
    |||||||| || ||||||||    
T  4318645 aacattaaaattaaaattaa 4318626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 21017014 - 21016915
Alignment:
Q  72 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 171  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||||    
T  21017014 aagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttataaatgaatcaaatattaagattaaaattaactttttt 21016915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 29182424 - 29182547
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| || ||||||||||||| |||||||||||||||||   |||| ||||||||  ||||||||||||||||||||||     
T  29182424 ccaacgataaaatagtacttgtaagtctaagatgttgcaagtattactagatgaattac---tgatcattaatcaacaatcaacaatttaaaaatgaatc 29182520  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    || ||||||||  ||||||||||||||    
T  29182521 aatcattaagactaaaattaacttttt 29182547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 6089163 - 6089282
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||       |||| |||||||||||||||||||||||     
T  6089163 ccaacgataaaatagtaccagtaagtccaaaatgttgcaagcattactatatgaattactattg-------atcattaatcaacaatttaaaaatgaatc 6089255  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || |||||||| |||||    
T  6089256 aaacattaaaattaaaattaatttttt 6089282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 8513488 - 8513607
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| |||||||||||||| |||| ||||| || ||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||     
T  8513488 ccaatgataaaatagtaccggtaagtccaaaatcttgcaagcattactagatgaattactattg-------atcattaatcaacaatttaaaaatgaatc 8513580  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || ||||||||||||||    
T  8513581 aaacattaaaattaaaattaacttttt 8513607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 33724116 - 33724062
Alignment:
Q  111 attaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaac 165  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  33724116 attaatcattaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 33724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3879933 - 3879892
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3879933 aacaccccacaaagtgtaacacttaagactatcacataatat 3879892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21017106 - 21017065
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21017106 aacaccccacaaagtgtaacacttaagactatcacataatat 21017065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1946024 - 1946065
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  1946024 aacaccctacaaagtgtaacacttaagactatcacataatat 1946065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5627581 - 5627622
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  5627581 aacaccctacaaagtgtaatacttaagactatcacataatat 5627622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8513418 - 8513459
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  8513418 aacaccctacaaagtgtaacacttaagactatcacatgatat 8513459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30353352 - 30353311
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| |||||||||||||||||||||||||||||||| ||||    
T  30353352 aacatcccacaaagtgtaacacttaagactatcacatgatat 30353311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6091177 - 6091135
Alignment:
Q  1 aacaccccacaaagtgtaacactt-aagactatcacataatat 42  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  6091177 aacacccaacaaagtgtaacacttaaagactatcacataatat 6091135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4318816 - 4318775
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| | ||||||||||||||||||||||||||| ||||    
T  4318816 aacaccctataaagtgtaacacttaagactatcacatgatat 4318775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 7055201 - 7055168
Alignment:
Q  9 acaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||| |||||||||||||||    
T  7055201 acaaagtgtaacacttaaaactatcacataatat 7055168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7235029 - 7234988
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| |||||||||| |||||||||||| ||||||||    
T  7235029 aacaccccagaaagtgtaacgcttaagactatcgcataatat 7234988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 29182358 - 29182395
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  29182358 ccccataaagtgtaacacttaagactatcacatgatat 29182395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 2325320 - 2325195
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  2325320 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaataaatca 2325221  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  2325220 aacattaagatcaaaattaacttttt 2325195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 4763893 - 4764057
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaa 145  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| ||    
T  4763893 aacgataaaatagtacctgtaagtccaagatattgcaagcattactagttgaattactattgatcattaatcagtaatcaataatttaaaaatgaatcaa 4763992  T
Q  146 acattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||| ||||||||||||||||||       |||||||| || ||||||||||| ||||||||    
T  4763993 acattaaaatcaaaattaacttttttttaaaaagtcagtttccttactgcaccgtagaagctccc 4764057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 44 - 212
Target Start/End: Original strand, 41961100 - 41961267
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||     
T  41961100 ccaacgataaaataatacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatc 41961199  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    ||||||||| |||||||||||| |||||        ||||||| |||||||||||||| ||||||||||    
T  41961200 aaacattaaaatcaaaattaac-tttttcaaaaaattcagtttcctgactgcaccgtagaagctcccaa 41961267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 26357837 - 26357964
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  26357837 ccaacgataaaatagtatttttaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 26357936  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    ||||||||| ||||||||||||||||||    
T  26357937 aaacattaaaatcaaaattaactttttt 26357964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 7006881 - 7006755
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||     
T  7006881 ccaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaatttaaaaatgaatc 7006782  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||| ||| ||||||||||||||    
T  7006781 aaacattatgattaaaattaacttttt 7006755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 11366323 - 11366197
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||     
T  11366323 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 11366224  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || ||||||||||||||    
T  11366223 aaacattaaaattaaaattaacttttt 11366197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 18494224 - 18494098
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||     
T  18494224 ccaacgataaaatagtacatgtaagtccaagatgttgtaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaaatgaatc 18494125  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  18494124 aaacattaagattaaaattaacttttt 18494098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 49 - 170
Target Start/End: Complemental strand, 33709170 - 33709049
Alignment:
Q  49 gataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaaca 148  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  33709170 gataaaatagtacttgtaaatccaagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaaca 33709071  T
Q  149 ttaagatcaaaattaacttttt 170  Q
    |||| || ||||||||||||||    
T  33709070 ttaaaattaaaattaacttttt 33709049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 5881790 - 5881915
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||| |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |    
T  5881790 caacaataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattattcagtaatcaacaatttaaaaatgaatca 5881889  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  5881890 aacattaagattaaaattaacttttt 5881915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 19289269 - 19289140
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  19289269 attccgacaataaaataatacctgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcagaaattaacaatttaaaaatga 19289170  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || |||||||||||||||||||||||||||    
T  19289169 attaaacattaagatcaaaattaacttttt 19289140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 19500856 - 19500739
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaa 145  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  19500856 aacgataaaatagtacatgtaatttcaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaa 19500757  T
Q  146 acattaagatcaaaatta 163  Q
    | ||||||||||||||||    
T  19500756 atattaagatcaaaatta 19500739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 33660319 - 33660194
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  33660319 caacgataaaatagtatctgtaagtctgagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 33660220  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| || ||||||||||||||    
T  33660219 aacattaaaattaaaattaacttttt 33660194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 39167311 - 39167186
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| |||||  |||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  39167311 caacgataaaatagtacatgtaagtccaaattgttgctagcattactagatgaattactattaattatgaatcagtaatcaacaatttaaaaatgaataa 39167212  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  39167211 aacattaagattaaaattaacttttt 39167186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 43648187 - 43648062
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||| || ||||| |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  43648187 caacgataaaatagcacttgtaagtccaagatgtcgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 43648088  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| |||||||||||||||||    
T  43648087 aacattaaaatcaaaattaacttttt 43648062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 35959157 - 35959278
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  35959157 caacgataaaatagtacatgt----ccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 35959252  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| |||||||||||||||||    
T  35959253 aacattaaaatcaaaattaacttttt 35959278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 41465761 - 41465887
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||| ||||||||| |||||||||||||||| |||||     
T  41465761 ccaacgataaaatagtacatgtaagtccaagatgttgcaaacattactatatgaattactattgatcattaatcagcaatcaacaatttaaaattgaatc 41465860  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
     ||||||||||||||||||||||||||    
T  41465861 gaacattaagatcaaaattaacttttt 41465887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 4167183 - 4167347
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||| ||  ||||| ||||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| |    
T  4167183 caacgataaaataatatttgtaagtccaagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatta 4167282  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||||||| ||||||||| |||||       |||| |||||||||||||||||| ||||||||    
T  4167283 aacattaagattaaaattaac-tttttcaaaaaagtcaattttctgactgcaccgtagaagctccc 4167347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 19424574 - 19424414
Alignment:
Q  55 atagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaaga 154  Q
    |||||||||| || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||    
T  19424574 atagtacctgcaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaaga 19424475  T
Q  155 tcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaataaa 216  Q
    | |||||||||| ||||       ||||||||  ||||||||||||| ||||||||| ||||    
T  19424474 ttaaaattaact-ttttcaaaaaagtcagtttgatgactgcaccgtagaagctcccattaaa 19424414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 33550929 - 33550760
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaat----cagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||| || || ||||| ||||||||||||||||||||||||| ||||||||||||| ||    ||||||||||||||||||||||||    
T  33550929 caacgataaaatagtacttgaaagtccaatatgttgcaagcattactagatgaataactattgattatttattaaccagtaatcaacaatttaaaaatga 33550830  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || ||||||||||||||||||||||||||||        ||||||||||||| |||| ||| ||||||||    
T  33550829 atcaaacattaagatcaaaattaacttttttttaaaaattcagttttctgacagcactgtagaagctccc 33550760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 2324647 - 2324557
Alignment:
Q  211 aataaacaaacctgaggagctggggcgttgtcatcaatgaaaggggctgctaaacttataaacgatgcctcgccaacaccaaccagactat 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2324647 aataaacaaacctgaggagctggggcgttgtcatcaatgaaaggggctgctaaacttataaacgatgcctcaccaacaccaaccagactat 2324557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 27349894 - 27349793
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27349894 attccaacgataaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 27349795  T
Q  141 at 142  Q
    ||    
T  27349794 at 27349793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 44913924 - 44914053
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactaga---tgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||   |||||||||||| || || |||||||||||||||||||||||||||    
T  44913924 ccaacgataaaatagtacatgtaagtccaagatgttgcaagcattattagaaaatgaattactattaatcatgaatcagtaatcaacaatttaaaaatga 44914023  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || |||||||||||| ||||||||||||||    
T  44914024 atcaaacattaagattaaaattaacttttt 44914053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 43770791 - 43770665
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||| ||||||||||| || ||| | |||||||||||||||||||||||||||||| |||||||| |||||| || ||||||||||||||||||||||     
T  43770791 ccaacaataaaatagtatctttaagttcaagatgttgcaagcattactagatgaatttctattgatcattaattagaaatcaacaatttaaaaatgaatc 43770692  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  43770691 aaacattaagattaaaattaacttttt 43770665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 31862109 - 31862238
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || |||||||||||| ||||| |||||||| ||| |  ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  31862109 attccgacaataaaatagtacttgtaagtccaagatattgtagacattactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatga 31862208  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||| |||||||||||||||||||||||    
T  31862209 atcaaatattaagatcaaaattaacttttt 31862238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 31570677 - 31570551
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| |  ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||  ||||||||||||||     
T  31570677 ccaacgataaaatagtacttgtaagtttaagatgttgcaagcattgctagatgaattactattgatcattaatcagtaatcaaatatttaaaaatgaatc 31570578  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    || |||||| || ||||||||||||||    
T  31570577 aatcattaaaatgaaaattaacttttt 31570551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 13711723 - 13711845
Alignment:
Q  48 cgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaac 147  Q
    |||||||||||||||||||| || |||||||||||| || |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || |    
T  13711723 cgataaaatagtacctgtaagtctaagatgttgcaaacaatactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaatc 13711822  T
Q  148 attaagatcaaaattaacttttt 170  Q
    ||| | || |||||||| |||||    
T  13711823 atttaaattaaaattaatttttt 13711845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 37905967 - 37906097
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg- 139  Q
    ||||||| |||||||||  || ||||| |||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||     
T  37905967 attccaatgataaaataacacatgtaagtccaagatgttgcaagaattactggatgaattactattgatcattaatcagtaattaacaatttaaaaatga 37906066  T
Q  140 aataaaacattaagatcaaaattaacttttt 170  Q
    ||| ||||||||| ||||||||||| |||||    
T  37906067 aatcaaacattaaaatcaaaattaatttttt 37906097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 33902317 - 33902439
Alignment:
Q  87 ttactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnnnnnngtcagttt 186  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||       || |||||    
T  33902317 ttactagatgaattattattgattattaatctgtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttttttaaaaaaagttagttt 33902416  T
Q  187 tctgactgcaccgtaaaagctcc 209  Q
    ||||| ||||||||| |||||||    
T  33902417 tctgattgcaccgtagaagctcc 33902439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 41051243 - 41051117
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| ||||||||||||||||||| | |||||||||| ||||||| |||||||||||  ||||||| |||||||| |||||||||||| ||||||||||     
T  41051243 ccaaggataaaatagtacctgtaagttcaagatgttgtaagcattgctagatgaattgttattgatcattaatcaataatcaacaattcaaaaatgaatc 41051144  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || |||||||| |||||    
T  41051143 aaacattaaaattaaaattaatttttt 41051117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 4478625 - 4478717
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaa 136  Q
    |||| |||||||||||| | |||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  4478625 ccaatgataaaatagtatcggtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaa 4478717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 45 - 208
Target Start/End: Original strand, 3177200 - 3177362
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||| |||||||||||| ||||| |||||||| || |||||||||||||||||||||||||| || || ||| ||||||||||||||| ||||| ||| |    
T  3177200 caactataaaatagtacatgtaagtccaagatattacaagcattactagatgaattactatttatcatgaataagtaatcaacaatttgaaaataaatca 3177299  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctc 208  Q
    |||||||| || |||| |||| |||||       |||||||| |||||||||||||| ||||||    
T  3177300 aacattaaaattaaaagtaac-tttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 3177362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 29242080 - 29241963
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||| |||||||||||||| |||||||||        |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| |    
T  29242080 caacgatacaatagtacctgtaagtccaagatga-------attactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatca 29241988  T
Q  145 aacattaagatcaaaattaactttt 169  Q
    ||||||||||||| |||||||||||    
T  29241987 aacattaagatcataattaactttt 29241963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 18257453 - 18257355
Alignment:
Q  72 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||| ||||||| ||||||||||||  ||||| || ||||||||||||||    
T  18257453 aagatgttgcaagcattactagatgaattattatttatcattaatcagtaatcgacaattttaaaatgaataaattattaatattaaaattaacttttt 18257355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 232 - 311
Target Start/End: Complemental strand, 2337883 - 2337804
Alignment:
Q  232 ggggcgttgtcatcaatgaaaggggctgctaaacttataaacgatgcctcgccaacaccaaccagactatagagaataat 311  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  2337883 ggggcgttgtcatcaatgaaaggtggtgctaaacttataaacgaagcctcgccaacaccaaccagcctatacagaataat 2337804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 4264019 - 4263926
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaa 137  Q
    ||||| |||||||||||| | ||| | |||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||    
T  4264019 ccaacaataaaatagtacatataagttcaagatgttgcaagcattactagatgaaataatattgatcattgatcagtaatcaacaatttaaaaa 4263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 41463520 - 41463407
Alignment:
Q  57 agtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatc 156  Q
    ||||||| ||| || ||||||||| || ||||| ||||| ||||||||||||| |||||||| |||| || ||||||||||||||| || |||||||||     
T  41463520 agtacctctaagtctaagatgttgtaaacattaatagataaattactattgatcattaatcaataattaataatttaaaaatgaatcaatcattaagatt 41463421  T
Q  157 aaaattaacttttt 170  Q
    ||||||||||||||    
T  41463420 aaaattaacttttt 41463407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 2344777 - 2344686
Alignment:
Q  220 acctgaggagctggggcgttgtcatcaatgaaaggggctgctaaacttataaacgatgcctcgccaacaccaaccagactatagagaataat 311  Q
    ||||||| ||||||||| ||||||||||| ||||| ||||||| |||||||||||| ||||| |||||||||||||| ||||| ||||||||    
T  2344777 acctgagaagctggggcattgtcatcaataaaaggtgctgctagacttataaacgaagcctctccaacaccaaccagcctatacagaataat 2344686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 44286211 - 44286285
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagt 120  Q
    ||||||||||||||| |||||| || |||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  44286211 aacgataaaatagtatctgtaagtctaagatgttgcaagcattgttagatgaattactattgatcattaatcagt 44286285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 19314108 - 19314186
Alignment:
Q  48 cgataaaatagtacctgt---aaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaat 123  Q
    |||||||||||||| |||   || || |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19314108 cgataaaatagtacatgttataagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaat 19314186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 45328028 - 45328076
Alignment:
Q  122 atcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45328028 atcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 45328076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2325391 - 2325350
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2325391 aacaccccacaaagtgtaacacttaagactatcacataatat 2325350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3177129 - 3177170
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3177129 aacaccccacaaagtgtaacacttaagactatcacataatat 3177170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17071750 - 17071709
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17071750 aacaccccacaaagtgtaacacttaagactatcacataatat 17071709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 4763823 - 4763862
Alignment:
Q  3 caccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4763823 caccccacaaagtgtaacacttaagactatcacataatat 4763862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17054109 - 17054068
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  17054109 aacaccccacaaagtgtaacacttaanactatcacataatat 17054068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4167112 - 4167153
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  4167112 aacaccccacaaagtgtaacacttaaaactatcacataatat 4167153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11366394 - 11366353
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  11366394 aacaccctacaaagtgtaacacttaagactatcacataatat 11366353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 17054005 - 17053960
Alignment:
Q  113 taatcagtaatcaacaatttaaaaatgaataaaacattaagatcaa 158  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  17054005 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatcaa 17053960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 17071646 - 17071601
Alignment:
Q  113 taatcagtaatcaacaatttaaaaatgaataaaacattaagatcaa 158  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  17071646 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatcaa 17071601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 17071683 - 17071646
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgt 78  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17071683 attccaacgataaaatagtacctgtaaatccaagatgt 17071646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19289336 - 19289295
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  19289336 aacatcccacaaagtgtaacacttaagactatcacataatat 19289295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29242151 - 29242110
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  29242151 aacaccccacaaagtgtaacacctaagactatcacataatat 29242110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35959086 - 35959127
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  35959086 aacaccccacaaagtgtaacagttaagactatcacataatat 35959127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41961030 - 41961071
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  41961030 aacaccccacaaagtgtaacacttaagattatcacataatat 41961071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44286139 - 44286180
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  44286139 aacaccccacaaagtgtaacacttaagactatcacatgatat 44286180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 44913858 - 44913895
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44913858 ccccacaaagtgtaacacttaagactatcacataatat 44913895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 17054041 - 17054005
Alignment:
Q  42 ttccaacgataaaatagtacctgtaaatccaagatgt 78  Q
    |||||||||||||||||||||||||||||||||||||    
T  17054041 ttccaacgataaaatagtacctgtaaatccaagatgt 17054005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 45327981 - 45328025
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcatta 89  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  45327981 caacgataaaatagtacatgtaagtccaagatgttgcaagcatta 45328025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4264090 - 4264057
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  4264090 aacaccccacaaagtgtaacacttaagactatca 4264057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18258300 - 18258259
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  18258300 aacaccccataaagtgtaacacttaagactatcacatgatat 18258259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19424641 - 19424600
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  19424641 aacaccccacaaagtgtaacatttaagactatcacatgatat 19424600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 19500923 - 19500886
Alignment:
Q  6 cccacaaagtgtaacacttaagactatcacataatatt 43  Q
    |||||||| |||||||||||||||||||||||||||||    
T  19500923 cccacaaaatgtaacacttaagactatcacataatatt 19500886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31862042 - 31862083
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  31862042 aacaccccacaaagtgtaacacttaaaattatcacataatat 31862083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 36642248 - 36642293
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcatta 89  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||    
T  36642248 ccaacgataaaatagtaccggtaagttcaagatgttgcaagcatta 36642293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43648258 - 43648217
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  43648258 aacaccacacaaagtataacacttaagactatcacataatat 43648217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36642178 - 36642214
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacat 37  Q
    ||||||| |||||||||||||||||||||||||||||    
T  36642178 aacaccctacaaagtgtaacacttaagactatcacat 36642214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 33902258 - 33902297
Alignment:
Q  3 caccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  33902258 caccccacaaagtgtaacacttaatagtatcacataatat 33902297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26357767 - 26357809
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatatt 43  Q
    |||| |||||||| |||||||||||| ||||||||||||||||    
T  26357767 aacatcccacaaattgtaacacttaaaactatcacataatatt 26357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 33550999 - 33550969
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagacta 31  Q
    |||||||||||||||||||||||||||||||    
T  33550999 aacaccccacaaagtgtaacacttaagacta 33550969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31570747 - 31570706
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||| |||||||||||||||| |||||| ||||    
T  31570747 aacaccccacaaaatgtaacacttaagactgtcacatgatat 31570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 37905904 - 37905941
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  37905904 ccccacaaagtgtaacacttaaaactatcgcataatat 37905941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41465691 - 41465732
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| || ||||||||||||||||||||||| ||||||||    
T  41465691 aacacctcagaaagtgtaacacttaagactatcgcataatat 41465732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 5e-59; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 41 - 210
Target Start/End: Original strand, 18797559 - 18797727
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18797559 attccgacaataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 18797658  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || ||||||||||||||||||||||||||||       |||||||||||||||||| | |||||||||||    
T  18797659 atcaaacattaagatcaaaattaactttttt-aaaaaagtcagttttctgactgcatcataaaagctccc 18797727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 29173757 - 29173922
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||     
T  29173757 ccaacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatc 29173856  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    |||||||||||| ||||||||| |||||       |||||||||||||||||| |||| ||||||||    
T  29173857 aaacattaagattaaaattaac-tttttcaaaaaagtcagttttctgactgcatcgtagaagctccc 29173922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 41 - 208
Target Start/End: Original strand, 24211973 - 24212140
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  24211973 attccaacgataaaatagtacctataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatg 24212072  T
Q  140 aataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctc 208  Q
    ||| ||||||||| |||||||||||| |||||       |||||||| |||||||||||||| ||||||    
T  24212073 aatcaaacattaaaatcaaaattaac-tttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 24212140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 30055759 - 30055886
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30055759 attccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 30055858  T
Q  141 ataaaacattaagatcaaaattaacttt 168  Q
    || || | |||| |||||||||||||||    
T  30055859 atcaatcgttaaaatcaaaattaacttt 30055886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 37703423 - 37703298
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |    
T  37703423 caacgataaaatagtatctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatta 37703324  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  37703323 aacattaagatcaaaattaacttttt 37703298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 45 - 169
Target Start/End: Original strand, 37110110 - 37110234
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  37110110 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 37110209  T
Q  145 aacattaagatcaaaattaactttt 169  Q
    |||||||| || |||||||||||||    
T  37110210 aacattaaaattaaaattaactttt 37110234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 41 - 212
Target Start/End: Original strand, 7335025 - 7335195
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||| |||||||||||||    
T  7335025 attccgacaataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattaatcattaatcagaaatcaataatttaaaaatga 7335124  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    || ||||||||||||||||||||| ||||||       |||| ||| ||||||||||| || ||||||||||    
T  7335125 atcaaacattaagatcaaaattaa-ttttttcaaaaaagtcaatttcctgactgcaccatagaagctcccaa 7335195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 9355752 - 9355626
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||     
T  9355752 ccaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcaataatcaacaatttaaaaatgaatc 9355653  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| |||||||||||||||||    
T  9355652 aaacattaaaatcaaaattaacttttt 9355626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 22687466 - 22687592
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  22687466 ccaacgataaaatagtacatgtaagtccaagatgttgcaagcattaatagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 22687565  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    | |||||||||| ||||||||||||||    
T  22687566 atacattaagattaaaattaacttttt 22687592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 32820982 - 32820853
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || ||| |||| |||||||||||||||||||||    
T  32820982 attccaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattaatcattcatcaataatcaacaatttaaaaatga 32820883  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || |||||||||||||||||||||||||||    
T  32820882 atcaaacattaagatcaaaattaacttttt 32820853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 46481054 - 46480929
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  46481054 caacgataaaatagtacatgtaagtctaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaataa 46480955  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||| ||||||||||||    
T  46480954 aacattaagatcataattaacttttt 46480929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 17842509 - 17842385
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  17842509 caacgataaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 17842410  T
Q  145 aacattaagatcaaaattaactttt 169  Q
    |||||||| || |||||||||||||    
T  17842409 aacattaaaattaaaattaactttt 17842385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 207
Target Start/End: Original strand, 23111428 - 23111589
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| |    
T  23111428 caacgataaaatagtacatgtaaatcaaagatgttgaaagcattactagaagaattactattgatcataaatcagtaatcaacaatttaaaaatgaatca 23111527  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagct 207  Q
    ||||||||||||||| |||||||||||       |||||||||||||||| |||||| |||||    
T  23111528 aacattaagatcaaagttaactttttt-aaaaaagtcagttttctgactgtaccgtagaagct 23111589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 6546754 - 6546880
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||||||| || ||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  6546754 ccaacgataaaatagtacctgtaagtctaagatgaggcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 6546853  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| ||||||||||||||    
T  6546854 aatcattaagattaaaattaacttttt 6546880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 26588018 - 26587892
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||     
T  26588018 ccaacgataaaataatacatgtaagtccaagatgttgcaggcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatc 26587919  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  26587918 aaacattaagattaaaattaacttttt 26587892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 31520667 - 31520541
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||||     
T  31520667 ccaacgataaaatagtatctgtaagtccaagatgttgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatc 31520568  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||||| ||||||||||||    
T  31520567 aaacattaagatcataattaacttttt 31520541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 35353344 - 35353510
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||      
T  35353344 caacgataaaatagtacatttaagtccaagatgttgcaagcattactagatgaatcactattgatcattaatcagcaatcaacaatttaaaaatgaatcg 35353443  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    ||||||||||||||||||||| |||||       |||||||| ||||||||||| || ||||||||||    
T  35353444 aacattaagatcaaaattaac-tttttcaaaaaagtcagtttcctgactgcaccttagaagctcccaa 35353510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 31578993 - 31578864
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  31578993 attccaacgataaaataatacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaataatttaaaaatga 31578894  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||||| ||| |||||||||||||||||    
T  31578893 atcaaacaataaaatcaaaattaacttttt 31578864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 27283976 - 27284100
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaat-g 139  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||      
T  27283976 attccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaataa 27284075  T
Q  140 aataaaacattaagatcaaaattaa 164  Q
    ||| ||||||||| |||||||||||    
T  27284076 aatcaaacattaaaatcaaaattaa 27284100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 8861520 - 8861646
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| || ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||     
T  8861520 ccaacgataaaatagtacatgtaagtctaagatgttgcatgcattactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 8861619  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||| |||||| ||||||||||||||    
T  8861620 aaacactaagattaaaattaacttttt 8861646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 15612685 - 15612559
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||     
T  15612685 ccaatgataaaatagtacctgtaagtctaagatgttgcaagcattactagatgaattattgttgatcattaatcagtaatcaacaatttaaaaatgaatc 15612586  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| ||||||||||||||    
T  15612585 aatcattaagattaaaattaacttttt 15612559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 44 - 165
Target Start/End: Complemental strand, 44411466 - 44411345
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||     
T  44411466 ccaacgataaaatattatctgtaagtccaagatgttgcaagcattactagatgaattaatattgaccattaatcagtaatcaacaatttaaaaatgaatg 44411367  T
Q  144 aaacattaagatcaaaattaac 165  Q
    |||||||||||||| |||||||    
T  44411366 aaacattaagatcataattaac 44411345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 5657407 - 5657280
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  5657407 ccaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatgagtaatcaaaaatttaaaaatgaata 5657308  T
Q  144 aaacatt-aagatcaaaattaacttttt 170  Q
    || |||| ||||| ||||||||||||||    
T  5657307 aatcattaaagattaaaattaacttttt 5657280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 41 - 205
Target Start/End: Original strand, 10481837 - 10482000
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    |||||||| ||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||| |    
T  10481837 attccaacaataaaatagtatccgtaagtccaagatgttgcaagtattactagatgaattactattgatcgttaatcagtaattaacaatttaaaaataa 10481936  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaag 205  Q
    || ||| |||||||||||||||||| |||||       |||||||||||||||||||| ||||||    
T  10481937 attaaatattaagatcaaaattaac-tttttcaaaaaagtcagttttctgactgcaccataaaag 10482000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 45 - 164
Target Start/End: Original strand, 11071439 - 11071558
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |    
T  11071439 caacgataaaataatacctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatca 11071538  T
Q  145 aacattaagatcaaaattaa 164  Q
    |||||||| |||| ||||||    
T  11071539 aacattaaaatcataattaa 11071558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 32432687 - 32432851
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| |||| || || ||||| |||||||||||||||||||||||     
T  32432687 ccaacgataaaatagtacatgtaagtccaaggtgttgcaagcattactagatgaattattattaatcatgaatcaataatcaacaatttaaaaatgaatc 32432786  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcc 209  Q
    |||||||||||| |||| ||||||||||       |||||||| |||||||||||||| |||||||    
T  32432787 aaacattaagattaaaagtaactttttt-aaaaaagtcagtttcctgactgcaccgtagaagctcc 32432851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 37347256 - 37347382
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| |||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||||     
T  37347256 ccaatgataaaatagtatctgtaagtccaagatattgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatc 37347355  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||||| ||||||||||||    
T  37347356 aaacattaagatcataattaacttttt 37347382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 10359139 - 10359014
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||| |||||| ||||| |||||||| ||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||| |    
T  10359139 caacgataaattagtacttgtaagtccaagattttgcaagcattactaaatgatttactattgatcattaatcaataatcaacaatttaaaaatgaatca 10359040  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||| ||||||||||||||||||    
T  10359039 aacattatgatcaaaattaacttttt 10359014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 12390575 - 12390450
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| || |||||||||||||  ||||||||||||||||      
T  12390575 ccaatgataaaatagtacatgtaagtccaagatgttgcaaccattactagatgaattactatttatcattaatcagtaattgacaatttaaaaatgaaat 12390476  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    ||||||||||||||||||||||||||    
T  12390475 aaacattaagatcaaaattaactttt 12390450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 44 - 213
Target Start/End: Complemental strand, 48928223 - 48928055
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||||| |||     
T  48928223 ccaacgatgaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaataaatc 48928124  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaat 213  Q
     |||||| ||||||||||||| ||||||       |||| |||||| ||||||||||| |||||||||||    
T  48928123 gaacatttagatcaaaattaa-tttttttaaaaaagtcaattttctaactgcaccgtagaagctcccaat 48928055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 37704417 - 37704536
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||| ||||||||     
T  37704417 ccaacgataaaatagtatctgtaagtccaagatgttgcaagcattaccagatgaattactattgatcattaattagtaatcaacaatttacaaatgaatc 37704516  T
Q  144 aaacattaagatcaaaatta 163  Q
    ||||||||| ||||| ||||    
T  37704517 aaacattaaaatcaagatta 37704536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 25691468 - 25691343
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaa 145  Q
    ||||||||||||  || ||||| | ||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  25691468 aacgataaaataacacatgtaagttcaaaatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaa 25691369  T
Q  146 acattaagatcaaaattaactttttt 171  Q
    |||||||||| |||||||| ||||||    
T  25691368 acattaagattaaaattaaatttttt 25691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 26980542 - 26980667
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||| |||||| || ||||||||||||| |||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||| |    
T  26980542 caacgataaaatagtatctgtaagtctaagatgttgcaagtattactagatgaattattgttgatcattaatcggtaatcaacaatttaaaaatgaatca 26980641  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    | ||||||||| ||||||||||||||    
T  26980642 atcattaagattaaaattaacttttt 26980667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 12165979 - 12166074
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12165979 caacgataaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 12166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 41765004 - 41764878
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||||| ||||||||| ||||||| ||||||||| |||||||||||||||||||||      
T  41765004 ccaacgatgaaatagtacatgtaagtccaagattttgcaagcattactggatgaattattattgatcattaatcagcaatcaacaatttaaaaatgaacc 41764905  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
     ||||||||||||||||||||| ||||    
T  41764904 gaacattaagatcaaaattaacctttt 41764878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 43925355 - 43925456
Alignment:
Q  69 tccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttt 168  Q
    |||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  43925355 tccaagatgttgcaagcattactagatgaattactattaatcatgaatcactaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttt 43925454  T
Q  169 tt 170  Q
    ||    
T  43925455 tt 43925456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 15672675 - 15672559
Alignment:
Q  54 aatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaag 153  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||||||| ||||||||||    
T  15672675 aatagtacctgtaagtccaaaatgttgcaagcattactagatgaattactattgatcatgcatcaataatcaacaatttaaaaatgaattaaacattaag 15672576  T
Q  154 atcaaaattaacttttt 170  Q
     | |||||||| |||||    
T  15672575 gttaaaattaatttttt 15672559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 4583155 - 4583280
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||| ||||| ||  ||||| | ||||||||||||||||||||| |||||||||||||| || || ||||||| ||||||||||||||||||||| |    
T  4583155 caacgatcaaataatatttgtaagttcaagatgttgcaagcattactggatgaattactattaatcatgaatcagtcatcaacaatttaaaaatgaatta 4583254  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  4583255 aacattaagattaaaattaacttttt 4583280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 34362103 - 34361996
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||| ||||| |||||||||| || |||||||||||||||||| |    
T  34362103 caacgataaaatagtatctgtaagtccaagatattgcaaacattactagatgaattacttttgatcattaatcagtcattaacaatttaaaaatgaatca 34362004  T
Q  145 aacattaa 152  Q
    ||||||||    
T  34362003 aacattaa 34361996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 32593131 - 32593007
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||| ||||||||||| ||||| ||||||||||| |||  |||||||||| ||||||||| ||| ||||||||| |||||||||||| |||||||||      
T  32593131 caacgttaaaatagtacatgtaagtccaagatgttacaaatattactagataaattactatggatcattaatcagcaatcaacaattt-aaaatgaattg 32593033  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  32593032 aacattaagatcaaaattaacttttt 32593007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 38258867 - 38258982
Alignment:
Q  97 aattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgca 196  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||        |||||||||||||||||    
T  38258867 aattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaac-tttttcaaaaaaatcagttttctgactgca 38258965  T
Q  197 ccgtaaaagctcccaat 213  Q
    ||||| |||||||||||    
T  38258966 ccgtagaagctcccaat 38258982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 21991872 - 21991988
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||||| ||    || ||||||||||||||||||||||| |    
T  21991872 caacgataaaatagtacctgtaagtccaagatgttgcaagca-----agatgaattactattgatcat----cattaatcaacaatttaaaaatgaatca 21991962  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||| ||||    
T  21991963 aacattaagattaaaattaacctttt 21991988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 33688183 - 33688117
Alignment:
Q  49 gataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaa 115  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||    
T  33688183 gataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaa 33688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 44598902 - 44599027
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatc---agtaatcaacaatttaaaaatgaa 141  Q
    ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||||  ||||||||| |||||||   | ||||||||||||| ||||||||    
T  44598902 caacgataaaataatacatgtaagtctaagatgttacaagcattactagatgaa--actattgatcattaatcaataataatcaacaattt-aaaatgaa 44598998  T
Q  142 taaaacattaagatcaaaattaacttttt 170  Q
    | || | ||||||| |||||||| |||||    
T  44598999 tcaatcgttaagattaaaattaatttttt 44599027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10481770 - 10481811
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10481770 aacaccccacaaagtgtaacacttaagactatcacataatat 10481811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23111357 - 23111398
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23111357 aacaccccacaaagtgtaacacttaagactatcacataatat 23111398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38258710 - 38258751
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38258710 aacaccccacaaagtgtaacacttaagactatcacataatat 38258751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10359210 - 10359172
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataa 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10359210 aacaccccacaaagtgtaacacttaagactatcacataa 10359172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27283909 - 27283951
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatatt 43  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  27283909 aacaccccacaaagtgtaacacttaaaactatcacataatatt 27283951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 38053693 - 38053751
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat 99  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||||| | |||||||    
T  38053693 attccaacaataaaatagtacctgtaagtccaagatgttgcaaacattatttgatgaat 38053751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4583084 - 4583125
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  4583084 aacaccccacaaagtgtaacacttaaaactatcacataatat 4583125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9355822 - 9355781
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  9355822 aacaccccacaaagtgtaacacttaaaactatcacataatat 9355781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15612755 - 15612714
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  15612755 aacaccccacaaagtgtaacacttaagactatcacatgatat 15612714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15672758 - 15672717
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  15672758 aacactccacaaagtgtaacacttaagactatcacataatat 15672717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18797492 - 18797533
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  18797492 aacacctcacaaagtgtaacacttaagactatcacataatat 18797533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21991801 - 21991842
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  21991801 aacaccccacaaagtgtaacacttaagactatcacatgatat 21991842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30055692 - 30055733
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  30055692 aacaccctacaaagtgtaacacttaagactatcacataatat 30055733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32432617 - 32432658
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  32432617 aacaccccacaaaatgtaacacttaagactatcacataatat 32432658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37110039 - 37110080
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  37110039 aacaccccacaaagtgtaacacttaagactaccacataatat 37110080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37704322 - 37704363
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  37704322 aacaccccacaaagtgtaacacttaagactatcatataatat 37704363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41765074 - 41765033
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  41765074 aacaccccagaaagtgtaacacttaagactatcacataatat 41765033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43686205 - 43686246
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  43686205 aacaccccacaaagtgtaacacttaaaactatcacataatat 43686246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 38258777 - 38258816
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttg 80  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  38258777 attccaacgataaaatagtacctgtaagtccaagatgttg 38258816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 11071374 - 11071412
Alignment:
Q  4 accccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  11071374 accccacaaagtgtaacacttaagattatcacataatat 11071412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 43686276 - 43686330
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat 99  Q
    ||||||||||||| ||  ||||| ||||||||||||||||||||||| |||||||    
T  43686276 caacgataaaataatatttgtaagtccaagatgttgcaagcattactggatgaat 43686330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17842580 - 17842539
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  17842580 aacatcccacaaagtgtaacacttaagactaccacataatat 17842539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25691540 - 25691499
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  25691540 aacaccccacaaagtgtcacacttaagactatcacatgatat 25691499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31579060 - 31579019
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  31579060 aacaccctataaagtgtaacacttaagactatcacataatat 31579019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32821049 - 32821008
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  32821049 aacaccccataaagtgtaacacttaagactatcgcataatat 32821008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37703494 - 37703453
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  37703494 aacatcccacaaagtgtaccacttaagactatcacataatat 37703453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44598831 - 44598872
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  44598831 aacaccccacaaagtgtaacacctaagactatcacatgatat 44598872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26588080 - 26588044
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacat 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  26588080 aacaccccacaaagtgtaacactcaagactatcacat 26588044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 37347192 - 37347227
Alignment:
Q  7 ccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||| ||||||||||    
T  37347192 ccacaaagtgtaacacttaagactaccacataatat 37347227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 42
Target Start/End: Complemental strand, 46481115 - 46481084
Alignment:
Q  11 aaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||    
T  46481115 aaagtgtaacacttaagactatcacataatat 46481084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 42
Target Start/End: Complemental strand, 31520726 - 31520696
Alignment:
Q  12 aagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||||    
T  31520726 aagtgtaacacttaagactatcacataatat 31520696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 42
Target Start/End: Original strand, 38053637 - 38053667
Alignment:
Q  12 aagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||||    
T  38053637 aagtgtaacacttaagactatcacataatat 38053667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7334959 - 7335000
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||| |||||||||||||||| ||||| |||||||    
T  7334959 aacaccccacagagtgtaacacttaagattatcagataatat 7335000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 24211914 - 24211947
Alignment:
Q  9 acaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||| |||||||||||||||||||    
T  24211914 acaaagtgtaacacctaagactatcacataatat 24211947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35353273 - 35353314
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||    
T  35353273 aacaccccagaaaatgtaacacttaagactatctcataatat 35353314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 12166215 - 12166251
Alignment:
Q  135 aaatgaataaaacattaagatcaaaattaactttttt 171  Q
    |||||||| |||||||||||| |||||||||||||||    
T  12166215 aaatgaatcaaacattaagattaaaattaactttttt 12166251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22687404 - 22687436
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatc 33  Q
    ||||||||||||||||||||||| |||||||||    
T  22687404 aacaccccacaaagtgtaacactcaagactatc 22687436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 27421283 - 27421219
Alignment:
Q  52 aaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaat 116  Q
    |||||||||| ||||| |||||||||||||||   |||| ||||||| || ||||||| ||||||    
T  27421283 aaaatagtacatgtaagtccaagatgttgcaaatgttacaagatgaaataatattgatcattaat 27421219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27421376 - 27421344
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatc 33  Q
    |||| ||||||||||||||||||||||||||||    
T  27421376 aacatcccacaaagtgtaacacttaagactatc 27421344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 1815558 - 1815688
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  1815558 attccaacgataaaatagtacctgtaaatccaagatgttgcaaacattactagatgaattacaattgatcattaatcagtaatcaacaatttaaaaatga 1815657  T
Q  141 ataaaacattaagatcaaaattaactttttt 171  Q
    || ||||||||||||||||||||||||||||    
T  1815658 atcaaacattaagatcaaaattaactttttt 1815688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 41 - 211
Target Start/End: Complemental strand, 19440602 - 19440433
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |    
T  19440602 attccaatgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaatta 19440503  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccca 211  Q
    || ||||||||||||||||||||||||||||       |||||||| |||||||||||||| |||||||||    
T  19440502 atcaaacattaagatcaaaattaactttttt-aaaaaagtcagtttcctgactgcaccgtagaagctccca 19440433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 32912530 - 32912365
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||     
T  32912530 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 32912431  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||||| |||||||| || ||||||       |||||||| |||||||||||||||||||||||    
T  32912430 aaacattaaaatcaaaatgaa-ttttttcaaaaaagtcagtttcctgactgcaccgtaaaagctccc 32912365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 34361446 - 34361277
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  34361446 attccaacgataaaatagtacctataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatg 34361347  T
Q  140 aataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||| ||||||||| ||||||||||||| ||||       |||||||| |||||||||||||| ||||||||    
T  34361346 aatcaaacattaaaatcaaaattaact-ttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 34361277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 50 - 212
Target Start/End: Complemental strand, 879493 - 879332
Alignment:
Q  50 ataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacat 149  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  879493 ataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattattattgatcattaataagtaatcaacaatttaaaaatgaatcaaacat 879394  T
Q  150 taagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    ||||||||||||||||||||||       ||||||||||||||| |||| || ||||||||||    
T  879393 taagatcaaaattaactttttt-taaaaagtcagttttctgactacaccatagaagctcccaa 879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 41 - 210
Target Start/End: Original strand, 25184370 - 25184538
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  25184370 attccgacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatga 25184469  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || |||||||||||||||||||||| |||||       |||||||||||||||||||| || ||||||||    
T  25184470 atcaaacattaagatcaaaattaac-tttttcaaaaaagtcagttttctgactgcaccatagaagctccc 25184538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 37663695 - 37663568
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37663695 attccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 37663596  T
Q  141 ataaaacattaagatcaaaattaacttt 168  Q
    || || | |||| |||||||||||||||    
T  37663595 atcaatcgttaaaatcaaaattaacttt 37663568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 7703769 - 7703895
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||     
T  7703769 ccaacgataaaatagtacctgtaagtcgaagatgttgcaagcattactagatgaattactatttatcattaatcagtaatcaacaatttaaaaatgaatc 7703868  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  7703869 aaacattaagattaaaattaacttttt 7703895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 46888109 - 46887983
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||     
T  46888109 ccaacgataaaatagtacctgtaaatccaagatgttacaagcattactagatgaattactattgatcattaatcactaatcaacaatttaaaaatgaatc 46888010  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||| ||||| |||||||||||||||||    
T  46888009 aaatattaaaatcaaaattaacttttt 46887983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 50764981 - 50765107
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  50764981 caacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 50765080  T
Q  145 aacattaagatcaaaattaactttttt 171  Q
    ||||||||||| |||||||||||||||    
T  50765081 aacattaagattaaaattaactttttt 50765107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 3042880 - 3043005
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  3042880 caacgataaaatagtacatgtaagtccaacatgttgcaagcattactagatgaattagtattgattattaatcagtaatcaacaatttaaaaatgaatca 3042979  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| |||||||||||||||||    
T  3042980 aacattaaaatcaaaattaacttttt 3043005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 19089403 - 19089280
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  19089403 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 19089304  T
Q  145 aacattaagatcaaaattaacttt 168  Q
    | | |||| |||||||||||||||    
T  19089303 atcgttaaaatcaaaattaacttt 19089280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 37775918 - 37776045
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  37775918 ccaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 37776017  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    ||||||||||||  ||||||||||||||    
T  37776018 aaacattaagattgaaattaactttttt 37776045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 6864296 - 6864462
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||| ||  ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |    
T  6864296 caacgataaaataatatttgtaagttcaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatca 6864395  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    |||||||| |||||||||||| |||||       ||||||||||||||||||||||| ||||||||||    
T  6864396 aacattaaaatcaaaattaac-tttttcaaaaaagtcagttttctgactgcaccgtagaagctcccaa 6864462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 33341659 - 33341785
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  33341659 caacgataaaatagtacatgtaagtccaagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 33341758  T
Q  145 aacattaagatcaaaattaactttttt 171  Q
    ||||||||||| |||||||| ||||||    
T  33341759 aacattaagattaaaattaattttttt 33341785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 55477845 - 55477715
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  55477845 attccaacgataaaatagtacatttaagtccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaattaacaatttaaaaatga 55477746  T
Q  141 ataaaacattaagatcaaaattaactttttt 171  Q
    || ||||||||||||||||||||| ||||||    
T  55477745 atcaaacattaagatcaaaattaattttttt 55477715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 32579707 - 32579872
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |    
T  32579707 caacgataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatca 32579806  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccca 211  Q
    |||||||||||||||||||| ||||||       ||||||||||| ||||||||||| || ||||||    
T  32579807 aacattaagatcaaaattaa-ttttttcaaaaaagtcagttttctaactgcaccgtagaaactccca 32579872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 50697499 - 50697628
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  50697499 attccaacgataaaatagtacctgtaattccaagatgttgtaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatga 50697598  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| || |||||||| |||||    
T  50697599 atcaaacattaaaataaaaattaatttttt 50697628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 35025515 - 35025392
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaa 145  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||    
T  35025515 aacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaa 35025416  T
Q  146 acattaagatcaaaattaacttttt 170  Q
    ||||||| |||||||||||||||||    
T  35025415 acattaa-atcaaaattaacttttt 35025392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 49376228 - 49376392
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||| |||| ||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| |    
T  49376228 caacgataaaatagtacatgtaagtccaagaagttgaaagcattactaaatgaattactattgatcattaatcagtaatcaagaatttaaaaatgaatta 49376327  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||||||||||||||||| |||||       |||||||| |||||||||||||| ||||||||    
T  49376328 aacattaagatcaaaattaac-tttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 49376392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 23761331 - 23761457
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||     
T  23761331 ccaacgataaaattgtacctataagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaataatttaaaaatgaatc 23761430  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  23761431 aaacattaagattaaaattaacttttt 23761457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 35020989 - 35020817
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactat----tgattattaatcagtaatcaacaatttaaaa 136  Q
    |||||||||||||||||||| |||||| |||||||| |||||| |||||||||||||||||||||    |||| ||||||| ||||||||||||||||||    
T  35020989 attccaacgataaaatagtatctgtaagtccaagatattgcaaacattactagatgaattactatatattgatcattaatcggtaatcaacaatttaaaa 35020890  T
Q  137 atgaataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    |||||| ||||||||||||||||||||||||||||       ||||||||||||||| ||||||| ||||||||    
T  35020889 atgaatcaaacattaagatcaaaattaactttttt-aaaagagtcagttttctgactacaccgtagaagctccc 35020817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 7152154 - 7152029
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |    
T  7152154 caacgataaaatagtacctgtaagtccaagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatca 7152055  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| |||| |||||||||    
T  7152054 aacattaagatgaaaaataacttttt 7152029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 30002591 - 30002466
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| | ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |    
T  30002591 caacgataaaatagtacatttaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaataaacaatttaaaaatgaatca 30002492  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  30002491 aacattaagattaaaattaacttttt 30002466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 33816466 - 33816341
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||      
T  33816466 caacgataaaatagttcatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcg 33816367  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  33816366 aacattaagatcaaaattaacttttt 33816341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 44 - 167
Target Start/End: Complemental strand, 34948046 - 34947923
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||     
T  34948046 ccaacgataaaataatacatgtaagtccaagatgttgcaagcattactagatgaaatactattgatcgttaatcagtaatcaacaatttaaaaatgaatc 34947947  T
Q  144 aaacattaagatcaaaattaactt 167  Q
    |||||||||||| |||||||||||    
T  34947946 aaacattaagattaaaattaactt 34947923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 39400268 - 39400394
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||     
T  39400268 ccaacgataaaatggtacctttaagttcaagatgttgcaagcattactagatgaatgactattgatcattaatcagcaatcaacaatttaaaaatgaatc 39400367  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  39400368 aaacattaagattaaaattaacttttt 39400394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 47254000 - 47254126
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||| |||||||||||| || || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  47254000 ccaacaataaaatagtacatgcaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 47254099  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| ||||||||||||||    
T  47254100 aatcattaagattaaaattaacttttt 47254126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 17272225 - 17272350
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||| |    
T  17272225 caacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcggtaatgaacgatttaaaaatgaatca 17272324  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  17272325 aacattaagattaaaattaacttttt 17272350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 28002936 - 28002811
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||      
T  28002936 caacgataaaatagtacatgtaagtccaagatgttgctaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcg 28002837  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  28002836 aacattaagatcaaaattaacttttt 28002811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 29584150 - 29584025
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||| ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |    
T  29584150 caacaataaaatggtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatca 29584051  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  29584050 aacattaagattaaaattaacttttt 29584025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 32592347 - 32592470
Alignment:
Q  47 acgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaa 146  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||  ||||||| ||||||||||||||||||||||| |||    
T  32592347 acgataaaatagtacctgtaagttcaagatgttgaaagcattactaaatgaattactattgatcgttaatcaataatcaacaatttaaaaatgaatcaaa 32592446  T
Q  147 cattaagatcaaaattaacttttt 170  Q
    ||||||||| ||||||||||||||    
T  32592447 cattaagattaaaattaacttttt 32592470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 37287988 - 37288115
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||||||||||||     
T  37287988 ccaacgataaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgagcattaatcagtaatcaataatttaaaaatgaatc 37288087  T
Q  144 aaacattaaga-tcaaaattaacttttt 170  Q
    ||||||||||| | ||||||||||||||    
T  37288088 aaacattaagatttaaaattaacttttt 37288115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 4598242 - 4598368
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||||||||     
T  4598242 ccaacgataaaataatacatttaaatccaagatgttgcaagcattattagattaattactattgatcattaatcagcaatcaacaatttaaaaatgaatc 4598341  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||| ||||    
T  4598342 aaacattaagattaaaattaacatttt 4598368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 36493640 - 36493514
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||| |||||| || ||||| |||||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||||     
T  36493640 ccaacgataaaatagtatctgtaagtctaagatattgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatc 36493541  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||||| ||||||||||||    
T  36493540 aaacattaagatcataattaacttttt 36493514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 55241056 - 55240930
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||| || |||||||| |||||||||||||||||||||||     
T  55241056 ccaacgataaaatagtacatgtaagtccaagatgttgcaaacattactagataaattactattaatcattaatcaataatcaacaatttaaaaatgaatc 55240957  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| |||||||| |||||    
T  55240956 aaacattaagattaaaattaaattttt 55240930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 23431826 - 23431941
Alignment:
Q  55 atagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaaga 154  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||| |    
T  23431826 atagtacctgtaagtccaagatgttgcaagcattagtagatgaattactattgatcattaattagtaatcaacaatttaaaaatgcatcaaacattaaaa 23431925  T
Q  155 tcaaaattaacttttt 170  Q
    | ||||||||||||||    
T  23431926 ttaaaattaacttttt 23431941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 27396877 - 27397001
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||| | |||||| ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| |    
T  27396877 caacgataaagtggtacctataagtccaaaatgttgcaagcattactagatgaattactattgatcattaat--gtaatcaacaatttaaaaatgaatca 27396974  T
Q  145 aacattaagatcaaaattaactttttt 171  Q
    ||||||||||| |||||||||||||||    
T  27396975 aacattaagattaaaattaactttttt 27397001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 25701006 - 25700881
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||| | ||||||| ||||| |||||||||||  ||||||||||||||||||| |||||||| ||||  ||||||||||||||||| |    
T  25701006 caacgataaaatagtatccgtaaatctaagattttgcaagcattgttagatgaattactattgatcattaatcaataatgtacaatttaaaaatgaatca 25700907  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  25700906 aacattaagatcaaaattaacttttt 25700881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 26896347 - 26896475
Alignment:
Q  45 caacgataaaatagtacctgtaaatcc-aagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaat 142  Q
    ||||||||||||||||| ||||| ||| || ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  26896347 caacgataaaatagtacttgtaagtccgaaaatgttgcaaacattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaat 26896446  T
Q  143 aaaacattaagatcaaaattaactttttt 171  Q
      |||||||| ||||||||||||||||||    
T  26896447 cgaacattaaaatcaaaattaactttttt 26896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 4205244 - 4205370
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| || || ||| ||||||||| |||||||||||||||     
T  4205244 ccaacgataaaatagtacatgtaagtccaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatc 4205343  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || |||| |||||||||    
T  4205344 aaacattaaaattaaaagtaacttttt 4205370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 46884064 - 46883939
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||| ||||||||||||  ||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  46884064 attccaaagataaaatagta--tgtaagtcc--gatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataa 46883969  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| || |||||||| |||||    
T  46883968 atcaaacattaaaataaaaattaatttttt 46883939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 9139489 - 9139612
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||  |||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||||   |||||||||||||||     
T  9139489 ccaacgataacgtagtacatgtaagtccaagatgttgcaagcattactagacgaattactattgatcattaatcaataatc--taatttaaaaatgaatc 9139586  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    |||||||||||||| |||||||||||    
T  9139587 aaacattaagatcataattaactttt 9139612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 17167973 - 17168099
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||| || |||||| ||||||||| |||||||||||||||     
T  17167973 ccaacgataaaatagtacatgtaagtctaagatgttgcaagcatcactagatgaattactatttatcattaattagtaatcaataatttaaaaatgaatc 17168072  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || |||| ||| |||||    
T  17168073 aaacattaaaattaaaagtaatttttt 17168099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 44 - 212
Target Start/End: Complemental strand, 5047917 - 5047750
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||| |||||||||||| ||||| ||||||||||||||||  ||||||||| ||||| ||||||| | ||||||  ||| ||||||||||||||||||     
T  5047917 ccaacaataaaatagtacatgtaagtccaagatgttgcaagttttactagataaattattattgatcagtaatcaacaataaacaatttaaaaatgaatc 5047818  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
     |||||||| ||||||||||| ||||||       ||| |||| |||||||||||||||||||||||||    
T  5047817 gaacattaaaatcaaaattaa-ttttttcaaaaaagtctgtttcctgactgcaccgtaaaagctcccaa 5047750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 17173550 - 17173676
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||| || || ||| ||||||||| |||||||||||||||     
T  17173550 ccaacgataaaatagtacatgtaagtctaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatc 17173649  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || |||| ||| |||||    
T  17173650 aaacattaaaattaaaagtaatttttt 17173676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 42199986 - 42200116
Alignment:
Q  41 attccaacgataaaatagtacct-gtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaat 138  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| ||||| || | |||||||||||||||| |||||||||||    
T  42199986 attccaacgataaaataataccttgtaagtccaagatgttgcaagcattactagatgaatatactactgttcattaatcagtaatcaataatttaaaaat 42200085  T
Q  139 gaataaaacattaagatcaaaattaacttttt 170  Q
     ||| |||||| || ||| |||||||||||||    
T  42200086 taatcaaacatcaaaatc-aaattaacttttt 42200116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 38012568 - 38012648
Alignment:
Q  90 ctagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  38012568 ctagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcgaacattaagatcaaaattaacttttt 38012648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 4934133 - 4934040
Alignment:
Q  75 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaa-tttaaaaatgaataaaacattaagatcaaaattaactt 167  Q
    |||||||| |||||| |||||||||| ||||| || |||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||    
T  4934133 atgttgcacgcattaatagatgaatttctattaatcattaatcagtaatcaaaaattttaaaaataaattaaacattaagatcaaaattaactt 4934040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 36798477 - 36798572
Alignment:
Q  215 aacaaacctgaggagctggggcgttgtcatcaatgaaaggggctgctaaacttataaacgatgcctcgccaacaccaaccagactatagagaataa 310  Q
    |||||||||| | |||||||||||| |||||||||||||| ||||| | ||||||||| || ||||||||||||||||| || ||| |||||||||    
T  36798477 aacaaacctgtgaagctggggcgttatcatcaatgaaaggtgctgcaagacttataaatgaagcctcgccaacaccaacgagcctagagagaataa 36798572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1815491 - 1815532
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1815491 aacaccccacaaagtgtaacacttaagactatcacataatat 1815532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3042809 - 3042850
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3042809 aacaccccacaaagtgtaacacttaagactatcacataatat 3042850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17167903 - 17167944
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17167903 aacaccccacaaagtgtaacacttaagactatcacataatat 17167944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17173480 - 17173521
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17173480 aacaccccacaaagtgtaacacttaagactatcacataatat 17173521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35021056 - 35021015
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35021056 aacaccccacaaagtgtaacacttaagactatcacataatat 35021015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37663762 - 37663721
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37663762 aacaccccacaaagtgtaacacttaagactatcacataatat 37663721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 56050191 - 56050234
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcatt 88  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  56050191 caacgataaaatagtacctgtaagtccaagatgttgcaagcatt 56050234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25184303 - 25184345
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatatt 43  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  25184303 aacacctcacaaagtgtaacacttaagactatcacataatatt 25184345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6864225 - 6864266
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  6864225 aacaccccacaaagtgtaatacttaagactatcacataatat 6864266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19089474 - 19089433
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  19089474 aacaccctacaaagtgtaacacttaagactatcacataatat 19089433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32912601 - 32912560
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  32912601 aacaccctacaaagtgtaacacttaagactatcacataatat 32912560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42199919 - 42199960
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  42199919 aacaccctacaaagtgtaacacttaagactatcacataatat 42199960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47253930 - 47253971
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  47253930 aacaccccacaaagtgtaacacttaagactatcacatgatat 47253971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 38012114 - 38012169
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat 99  Q
    ||||| |||||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  38012114 ccaacaataaaatagtacatgtaagtccaagatgttgcaaatattactagatgaat 38012169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 33816534 - 33816496
Alignment:
Q  4 accccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  33816534 accccacaaagtgtaacacttaagactatcgcataatat 33816496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 879569 - 879528
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  879569 aacacctcacaaagtgtaacatttaagactatcacataatat 879528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4934223 - 4934182
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  4934223 aacacctcacaaagtgtaacacttaagactatcatataatat 4934182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28003007 - 28002966
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  28003007 aacaccccagaaagtgtaacacttaaaactatcacataatat 28002966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33341588 - 33341629
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  33341588 aacacctcacaaagtgtaacacttaagactatcacatgatat 33341629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50697431 - 50697472
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  50697431 aacaccacacaaagtgcaacacttaagactatcacataatat 50697472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 55477912 - 55477871
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  55477912 aacaccccacaacgtgtaacactgaagactatcacataatat 55477871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 35025616 - 35025576
Alignment:
Q  2 acaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  35025616 acaccccagaaagtgtaacacttaagactatcgcataatat 35025576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 49376158 - 49376198
Alignment:
Q  2 acaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  49376158 acaccccacaatgtgtaacacttaagattatcacataatat 49376198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 55241126 - 55241090
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacat 37  Q
    |||||| ||||||||||||||||||||||||||||||    
T  55241126 aacacctcacaaagtgtaacacttaagactatcacat 55241090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 36493704 - 36493669
Alignment:
Q  7 ccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||| ||||||||||    
T  36493704 ccacaaagtgtaacacttaagactaccacataatat 36493669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 25701073 - 25701039
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatcacataa 39  Q
    |||||||||||||||||||||||| ||||||||||    
T  25701073 ccccacaaagtgtaacacttaagattatcacataa 25701039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7703699 - 7703740
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||    
T  7703699 aacactccacaaagtgtcacacttaagactatcacatgatat 7703740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 26896285 - 26896318
Alignment:
Q  9 acaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||| ||||||||    
T  26896285 acaaagtgtaacacttaagactatcgcataatat 26896318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34361513 - 34361472
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||  ||||||||||||||    
T  34361513 aacaccctacaaagtgtaacacttaaagctatcacataatat 34361472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38012044 - 38012085
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| |||| |||||||||| |||||||||||||||||||||    
T  38012044 aacatcccagaaagtgtaacgcttaagactatcacataatat 38012085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34948118 - 34948075
Alignment:
Q  1 aacaccccacaaagtgtaac--acttaagactatcacataatat 42  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||    
T  34948118 aacaccccacaaagtgtaacgtacttaagactatcacatgatat 34948075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 8e-58; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 40552187 - 40552058
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40552187 attccaacgataaaatagtacatgtaagtccatgatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 40552088  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || |||||||||||||||||||||||||||    
T  40552087 atcaaacattaagatcaaaattaacttttt 40552058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 46297690 - 46297522
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  46297690 attccaacgataaaatagtatttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatga 46297591  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || ||||||||||||||||||||||||||||       ||||||||| ||||||||||||| ||||||||    
T  46297590 atcaaacattaagatcaaaattaactttttt-aaaaaagtcagttttttgactgcaccgtagaagctccc 46297522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 11357306 - 11357181
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  11357306 ccaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 11357207  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    ||||||||||||||||||||||||||    
T  11357206 aaacattaagatcaaaattaactttt 11357181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 26941188 - 26941020
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26941188 attccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 26941089  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || || | |||| ||||||||||||| ||||       ||||||||||||||||||||||| ||||||||    
T  26941088 atcaagcgttaaaatcaaaattaact-ttttcaaaaaagtcagttttctgactgcaccgtagaagctccc 26941020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 22622642 - 22622478
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |    
T  22622642 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaactatttaaaaatgaatca 22622543  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    |||||||| ||||||||||||| ||||        ||||||| |||||||||||||||||||||||    
T  22622542 aacattaaaatcaaaattaact-ttttcaaaaaaatcagtttcctgactgcaccgtaaaagctccc 22622478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 44 - 212
Target Start/End: Original strand, 4015710 - 4015877
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  4015710 ccaacggtaaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 4015809  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    |||||||||||| ||||||||| |||||       ||||||||  ||||||||||||| ||||||||||    
T  4015810 aaacattaagattaaaattaac-tttttcaaaaaagtcagtttcatgactgcaccgtagaagctcccaa 4015877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 42506003 - 42505876
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42506003 attccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 42505904  T
Q  141 ataaaacattaagatcaaaattaacttt 168  Q
    || || | |||| |||||||||||||||    
T  42505903 atcaatcgttaaaatcaaaattaacttt 42505876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 41 - 211
Target Start/End: Complemental strand, 21009730 - 21009560
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  21009730 attccaacgataaaatagtacctgtaagtctaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatg 21009631  T
Q  140 aataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccca 211  Q
    ||| ||||||||| ||||||||||| ||||||       |||||||| |||||||||||||| || ||||||    
T  21009630 aatcaaacattaaaatcaaaattaa-tttttttaaaaaagtcagtttcctgactgcaccgtagaaactccca 21009560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 1089945 - 1090071
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||     
T  1089945 ccaacgataaaatagtacat-taaatccaagattttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatc 1090043  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    ||||||||||||||||||||||||||||    
T  1090044 aaacattaagatcaaaattaactttttt 1090071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 39282904 - 39283067
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |    
T  39282904 caacaataaaatagtatctgtaaatccaaaatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatca 39283003  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcc 209  Q
    |||||||| |||||||||||| |||||       |||||||| |||||||||||||| |||||||    
T  39283004 aacattaaaatcaaaattaac-tttttcaaaaaagtcagtttcctgactgcaccgtagaagctcc 39283067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 29099599 - 29099763
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaa 145  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||    
T  29099599 aacgataaaatagtacctttaagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagcaatcaacaatttaaaaatgaatcaa 29099698  T
Q  146 acattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||| || ||||||||||||||        ||||||||  ||||||||||||| ||||||||    
T  29099699 acattaatattaaaattaactttttcaaaaaaagtcagtttcatgactgcaccgtagaagctccc 29099763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 33378709 - 33378543
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| |    
T  33378709 caacgataaaatagtacatgtaagttcaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacgatttaaaaatgaatca 33378610  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    ||||||||||| |||||||| ||||||       |||||||| |||||||||||||| ||||||||||    
T  33378609 aacattaagattaaaattaa-ttttttcaaaaaagtcagtttcctgactgcaccgtagaagctcccaa 33378543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 47481774 - 47481900
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||     
T  47481774 caacgataaaatagtacttgtaagttcaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 47481873  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| |||||||||||||||||    
T  47481874 aaacattaaaatcaaaattaacttttt 47481900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 43975817 - 43975652
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||     
T  43975817 ccaacgataaaatagtacttgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaatc 43975718  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
     |||||||||||||| ||||| ||||||       ||||||||||||||||||||||| || |||||    
T  43975717 gaacattaagatcaagattaa-ttttttcaaaagagtcagttttctgactgcaccgtagaaactccc 43975652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 48355189 - 48355318
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || ||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  48355189 attccgacaataaaatagtatctgtaagtccaagatgttgcaagtattactagatgaattattattgatcattaatcagtaagcaacaatttaaaaatga 48355288  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || |||||||||||||||||||||||||||    
T  48355289 atcaaacattaagatcaaaattaacttttt 48355318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 53229077 - 53228952
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||     
T  53229077 ccaacgataaaataatacatgtaagttcaagatgttgcaagcattactagatgaattagtattgatcattaatcaataatcaacaatttaaaaatgaatc 53228978  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    ||||||||||||||||||||||||||    
T  53228977 aaacattaagatcaaaattaactttt 53228952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 52040846 - 52040722
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| | ||||||| |||||| ||||||||||||||||||||||||| |    
T  52040846 caacgataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaatgattattgatcattaatgagtaatcaacaatttaaaaatgaatca 52040747  T
Q  145 aacattaagatcaaaattaactttt 169  Q
    |||||||||||||||||||||||||    
T  52040746 aacattaagatcaaaattaactttt 52040722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 7327407 - 7327280
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||     
T  7327407 ccaacgataaaatagtacttgtaagtctaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatc 7327308  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    ||  |||||||| |||||||||||||||    
T  7327307 aattattaagattaaaattaactttttt 7327280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 21193861 - 21193984
Alignment:
Q  47 acgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaa 146  Q
    |||||||||||||| | |||| | ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21193861 acgataaaatagtagccgtaagttcaagatgttgcaaccattactaaatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaa 21193960  T
Q  147 cattaagatcaaaattaacttttt 170  Q
    ||||||||| ||||||||||||||    
T  21193961 cattaagattaaaattaacttttt 21193984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 33698404 - 33698530
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||     
T  33698404 ccaacgataaaatagtacctgtaagtctaagatattgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatc 33698503  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |  ||||||||| ||||||||||||||    
T  33698504 agtcattaagattaaaattaacttttt 33698530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 44186442 - 44186316
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| ||||||||||||||| ||| || |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||     
T  44186442 ccaatgataaaatagtacctctaagtctaagatgttgcaagcattactagataaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 44186343  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||| ||||    
T  44186342 aaacattaagattaaaattaacatttt 44186316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 44891749 - 44891875
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||||||  || || |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |    
T  44891749 caacgataaaatagtacctacaagtctaagatgttgcaagcattactagatgaattactgttgatcattaatcagtaatcaacaatttaaaaatgaatca 44891848  T
Q  145 aacattaagatcaaaattaactttttt 171  Q
    | ||||||||| |||||||||||||||    
T  44891849 atcattaagattaaaattaactttttt 44891875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 54506055 - 54506185
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    ||||||||||||||||||||  | ||| ||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  54506055 attccaacgataaaatagtatttataagtccaaaatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatg 54506154  T
Q  140 aataaaacattaagatcaaaattaacttttt 170  Q
    ||| ||||||||| |||||||||||||||||    
T  54506155 aatcaaacattaaaatcaaaattaacttttt 54506185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 22445990 - 22445865
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||| ||| ||||| |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||     
T  22445990 ccaacgataaaatagtacctttaagtccaaaatgttgcaagtattactggatgaattactattgatcattaatcagtaatcaacaatttaaatatgaatc 22445891  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    |||||||||||||| |||||||||||    
T  22445890 aaacattaagatcataattaactttt 22445865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 22451220 - 22451345
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||||||||      
T  22451220 caacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagcaatcaaaaatttaaaaatgaatcg 22451319  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  22451320 aacattaagatcaaaattaacttttt 22451345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 37157959 - 37158124
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| ||||||||||||| ||||| ||||| |||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||     
T  37157959 ccaatgataaaatagtacatgtaagtccaatatgtcgcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatc 37158058  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||||| |||||||||||| |||||       |||||||| |||||||||||||| ||||||||    
T  37158059 aaacattaaaatcaaaattaac-tttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 37158124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 49 - 210
Target Start/End: Original strand, 37203324 - 37203484
Alignment:
Q  49 gataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaaca 148  Q
    ||||||||||||||||||| ||||| || | ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| |||||    
T  37203324 gataaaatagtacctgtaagtccaatatatcgcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaaca 37203423  T
Q  149 ttaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    |||| |||||||||||| |||||       |||||||| |||||||||||||| ||||||||    
T  37203424 ttaaaatcaaaattaac-tttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 37203484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 24708040 - 24707914
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||| ||||| |||||||||| || ||||||||||||||||||||||||||||||||     
T  24708040 ccaacgataaaatagtacatgtaagtccaagaagttgcaagcattattagataaattactattaatcattaatcagtaatcaacaatttaaaaatgaatc 24707941  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || ||||||||||||||    
T  24707940 aaacattaaaattaaaattaacttttt 24707914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 169
Target Start/End: Original strand, 3362507 - 3362631
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||| |||| |  || ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  3362507 caacgataaaattgtacttagaagtccaatatgttgcaagcattactggatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 3362606  T
Q  145 aacattaagatcaaaattaactttt 169  Q
    ||||||||||||| |||||||||||    
T  3362607 aacattaagatcataattaactttt 3362631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 41 - 212
Target Start/End: Complemental strand, 51212699 - 51212535
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||||||||||    
T  51212699 attccgacaataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattaaaaatcaacaatttaaaaatga 51212600  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    |      |||||||||||||||||| |||||       |||||||||||||||||||| || ||||||||||    
T  51212599 a------attaagatcaaaattaac-tttttcaaaaatgtcagttttctgactgcaccatagaagctcccaa 51212535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 14586604 - 14586479
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||     
T  14586604 ccaacgataaaatagtacg-gtaagtccaagatgttgcaagcattactagataaattactactgatcattaatcagtaatcaacaatttaaaaataaatc 14586506  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| |||||||| |||||    
T  14586505 aaacattaagattaaaattaatttttt 14586479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 36012390 - 36012556
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||  ||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||     
T  36012390 ccaacgataaaatagtaccgataagtccaaaatgctgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatc 36012489  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||||| || |||||| |  |||||       ||||||||  ||||||||||||| ||||||||    
T  36012490 aaacattaaaattaaaatttaactttttcaaaaaagtcagtttcatgactgcaccgtagaagctccc 36012556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 2008184 - 2008316
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcag-------taatcaacaatttaaaaa 137  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| || ||||||| |||||||||       ||||||||||||||||||    
T  2008184 caacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaaataatattgatcattaatcagtaatcattaatcaacaatttaaaaa 2008283  T
Q  138 tgaataaaacattaagatcaaaattaacttttt 170  Q
    ||||| |||||||||||| ||||||||||||||    
T  2008284 tgaatcaaacattaagattaaaattaacttttt 2008316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 40936224 - 40936350
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| || || || |||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| |||     
T  40936224 ccaacgataaaatagtacatgcaagtctaagatgttgcaagcattactagataaattactattgatcattaatcggtaatcaacaatttaaaaataaatc 40936323  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    || |||||||||  |||||||||||||    
T  40936324 aatcattaagattgaaattaacttttt 40936350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 4761576 - 4761447
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || |||||||||||||| ||| ||||| ||||||||| |||||| ||||||||||||||| || ||||||||| |||||||||||| |||||||    
T  4761576 attccgacaataaaatagtacctataagtccaaaatgttgcaaacattaccagatgaattactattaatcattaatcagaaatcaacaatttgaaaatga 4761477  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| |||||||||||||||||    
T  4761476 atcaaacattaaaatcaaaattaacttttt 4761447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 32373722 - 32373846
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||      
T  32373722 caacgataaaatagtacttgtaagtctaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaattt-aaaatgaattc 32373820  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    | || |||||| ||||||||||||||    
T  32373821 atcaataagattaaaattaacttttt 32373846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 25579990 - 25580117
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||  |||||| |||||| ||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||      
T  25579990 ccaacgataaaactgtacctataaatctaagatattgcaagcattactagatgaattactattgatcattaatccgcaatcaacaatttaaaaatgaacc 25580089  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    || ||||||||| || ||||||||||||    
T  25580090 aatcattaagattaagattaactttttt 25580117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 46994589 - 46994490
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  46994589 attccgacaataaaatagtacctgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatga 46994490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 34133186 - 34133284
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaat 142  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | || || |||| ||||||||||||||||||||||||    
T  34133186 ccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactagtaatcatgaatcggtaatcaacaatttaaaaatgaat 34133284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 3655130 - 3654998
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagat--gaattactattgattattaatcagtaatcaacaatttaaaaat 138  Q
    |||||| ||||||||||  || | ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  3655130 attccatcgataaaataacacatataagtccaagatgttgcaagcattactagatatgaattactattgattattaatcagtaatcaacaatttaaaaat 3655031  T
Q  139 -gaataaaacattaagatcaaaattaacttttt 170  Q
      ||| ||||||||| |||||||||||| ||||    
T  3655030 aaaatcaaacattaaaatcaaaattaacatttt 3654998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 29164062 - 29164180
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaa 145  Q
    |||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||       |||| ||||||||||||||||||| ||| ||    
T  29164062 aacgataaaatagtacttgtaagtctaagatgttacaagcattactagatgaattactattg-------atcattaatcaacaatttaaaaataaatcaa 29164154  T
Q  146 acattaagatcaaaattaactttttt 171  Q
    |||||||||| |||||||||||||||    
T  29164155 acattaagattaaaattaactttttt 29164180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 20373140 - 20373062
Alignment:
Q  92 agatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  20373140 agatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 20373062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 24488887 - 24488761
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||| ||||||||||  | |||| | |||||||||||||||||||||||||| ||||||||| || || ||||| ||||||| |||||||||||||||     
T  24488887 ccaacaataaaatagtgtcagtaagttcaagatgttgcaagcattactagatgcattactattaatcatgaatcaataatcaataatttaaaaatgaatc 24488788  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || ||||||||||||||    
T  24488787 aaacattaatattaaaattaacttttt 24488761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 27480287 - 27480164
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttg----caagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    |||||||||||||||||| ||||| ||||| |||||     ||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  27480287 ccaacgataaaatagtacatgtaagtccaaaatgttaattacaaacattactagatgaattactattgattattaatcagcgatcaacaatttaaaaatg 27480188  T
Q  140 aataaaacattaagatcaaaatta 163  Q
    |||  |||||||||| ||||||||    
T  27480187 aatcgaacattaagaacaaaatta 27480164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 50475067 - 50475195
Alignment:
Q  49 gataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattg-------attattaatcagtaatcaacaatttaaaaatgaa 141  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||       || |||||||||||||||| ||||||||||||||    
T  50475067 gataaaataatacttgtaagtccaagatgttgcaagcattactagatgaattagtattgatcattaatcattaatcagtaatcaataatttaaaaatgaa 50475166  T
Q  142 taaaacattaagatcaaaattaacttttt 170  Q
    | ||||||||| ||||||||||| |||||    
T  50475167 tcaaacattaaaatcaaaattaaattttt 50475195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 38591950 - 38592047
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaat 142  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||| || |  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  38591950 caacgataaaaaagtatttgtaaatccaagatgttgcaagcattattaaacaaattactattgatcattaatcagtaatcaacaatttaaaaatgaat 38592047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 38 - 170
Target Start/End: Complemental strand, 11357081 - 11356957
Alignment:
Q  38 aatattccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaa 137  Q
    ||||| |||| ||||||||||||  ||||| |||||||||||||||||||||        ||||||||| || |||||| ||||||||||||||||||||    
T  11357081 aatatgccaatgataaaatagtatttgtaagtccaagatgttgcaagcatta--------attactattcatcattaattagtaatcaacaatttaaaaa 11356990  T
Q  138 tgaataaaacattaagatcaaaattaacttttt 170  Q
    |||||  ||||||||||||||||||||||||||    
T  11356989 tgaatccaacattaagatcaaaattaacttttt 11356957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 54828629 - 54828546
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatc 124  Q
    |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  54828629 attccaactataaaatagtacatgtaagtccaagatgttgcaagcattactagataaattactattgatcattaatcagtaatc 54828546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 45174757 - 45174821
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattga 108  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  45174757 ccaacgataaaatagtaacggtaagtccaagatgttgcaagcattactagatgaattactattga 45174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 11835556 - 11835494
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattga 108  Q
    |||||||||||||||  ||||| ||||||||||||||| |||||||| |||||||||||||||    
T  11835556 aacgataaaatagtatttgtaagtccaagatgttgcaaacattactaaatgaattactattga 11835494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34133116 - 34133157
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34133116 aacaccccacaaagtgtaacacttaagactatcacataatat 34133157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37157888 - 37157929
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37157888 aacaccccacaaagtgtaacacttaagactatcacataatat 37157929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39282833 - 39282874
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39282833 aacaccccacaaagtgtaacacttaagactatcacataatat 39282874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42506070 - 42506029
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42506070 aacaccccacaaagtgtaacacttaagactatcacataatat 42506029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46297757 - 46297716
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  46297757 aacaccccacaaagtgtaacacttaagactatcacataatat 46297716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 37203250 - 37203289
Alignment:
Q  3 caccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37203250 caccccacaaagtgtaacacttaagactatcacataatat 37203289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3362436 - 3362474
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataa 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3362436 aacaccccacaaagtgtaacacttaagactatcacataa 3362474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 11467075 - 11467187
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||| ||||||||||||| || || ||||||||||||       ||||||||||||||||||| ||||||       |||||||||||||||||||     
T  11467075 ccaacgacaaaatagtacctgcaagtctaagatgttgcaa-------tagatgaattactattgatcattaat-------caacaatttaaaaatgaatc 11467160  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    || ||||||||  ||||||||||||||    
T  11467161 aatcattaagaataaaattaacttttt 11467187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 53811659 - 53811597
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactatt 106  Q
    |||||||||||||| |||  |||| |||||||||||||| ||||| |||||||||||||||||    
T  53811659 ccaacgataaaataatactcgtaagtccaagatgttgcaggcattcctagatgaattactatt 53811597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7327477 - 7327436
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  7327477 aacaccccacaaagtgtaacacttaagactatcacatgatat 7327436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22622713 - 22622672
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  22622713 aacaccccacaaagcgtaacacttaagactatcacataatat 22622672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47481703 - 47481744
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  47481703 aacaccctacaaagtgtaacacttaagactatcacataatat 47481744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 48355128 - 48355163
Alignment:
Q  7 ccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  48355128 ccacaaagtgtaacacttaagactatcacataatat 48355163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 1089879 - 1089913
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatcacataa 39  Q
    |||||||||||||||||||||||||||||||||||    
T  1089879 ccccacaaagtgtaacacttaagactatcacataa 1089913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 11467008 - 11467046
Alignment:
Q  4 accccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  11467008 accccacaaagtgtaacacttaagactatcacatgatat 11467046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 43348509 - 43348563
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat 99  Q
    ||||||||||||||||| ||||| |  ||||||||||||||||||||| ||||||    
T  43348509 caacgataaaatagtacttgtaagtttaagatgttgcaagcattactaaatgaat 43348563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 52040914 - 52040876
Alignment:
Q  4 accccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  52040914 accccacatagtgtaacacttaagactatcacataatat 52040876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 4761639 - 4761602
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  4761639 ccccacaaagtataacacttaagactatcacataatat 4761602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 21009789 - 21009756
Alignment:
Q  9 acaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||    
T  21009789 acaaagtgtaacacttaagactatcacataatat 21009756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24708110 - 24708069
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  24708110 aacaccccacaaagtgtaacacttaaaacaatcacataatat 24708069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25579920 - 25579961
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  25579920 aacaccccacaaagtgtaacacttaagactattacatgatat 25579961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33698334 - 33698375
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  33698334 aacaccccacaaagtgtaacacttaagactatcgcatgatat 33698375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44891678 - 44891719
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||| ||||||||||||||||||||||||||||||| ||||    
T  44891678 aacactccacaaagtgtaacacttaagactatcacatgatat 44891719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 46994652 - 46994615
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  46994652 ccccacaaaatgtaacacttaagactatcacataatat 46994615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 53176235 - 53176276
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||| ||||||||||||||||||||||||||||||| ||||    
T  53176235 aacactccacaaagtgtaacacttaagactatcacatgatat 53176276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 53229143 - 53229110
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatcacata 38  Q
    ||||||||||||||||||||||||||||||||||    
T  53229143 ccccacaaagtgtaacacttaagactatcacata 53229110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 54505996 - 54506029
Alignment:
Q  9 acaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||    
T  54505996 acaaagtgtaacacttaagactatcacataatat 54506029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 2008114 - 2008154
Alignment:
Q  2 acaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| ||||||||||||||||||||||||||||||| ||||    
T  2008114 acactccacaaagtgtaacacttaagactatcacatgatat 2008154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 35844577 - 35844624
Alignment:
Q  123 tcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    |||||||||||||||| ||| ||||||||| || ||||||||||||||    
T  35844577 tcaacaatttaaaaataaatcaaacattaaaattaaaattaacttttt 35844624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 42
Target Start/End: Complemental strand, 11357365 - 11357335
Alignment:
Q  12 aagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||||    
T  11357365 aagtgtaacacttaagactatcacataatat 11357335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24488957 - 24488916
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| ||||| ||||||||||||||||||||||| |||||    
T  24488957 aacacctcacaaggtgtaacacttaagactatcacacaatat 24488916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32373651 - 32373692
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| |||||||||||| ||||||||||||||||||| ||||    
T  32373651 aacatcccacaaagtgtgacacttaagactatcacatgatat 32373692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 54828696 - 54828655
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| ||||||||||||||||||||| ||||||| |||||||    
T  54828696 aacatcccacaaagtgtaacacttaaaactatcaaataatat 54828655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4015641 - 4015673
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatc 33  Q
    ||||||||||||||||| |||||||||||||||    
T  4015641 aacaccccacaaagtgtcacacttaagactatc 4015673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 11357140 - 11357104
Alignment:
Q  6 cccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||| |||||||||| |||||||    
T  11357140 cccacaaagtgtaacactcaagactatcatataatat 11357104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 20373234 - 20373198
Alignment:
Q  6 cccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| |||||||||||||||| |||||||||||||||    
T  20373234 cccataaagtgtaacacttaaaactatcacataatat 20373198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 85)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 22255436 - 22255568
Alignment:
Q  38 aatattccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaa 137  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22255436 aatattccaacgataaaatagtacctgtaagtccaagatgttgcaagccttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaa 22255535  T
Q  138 tgaataaaacattaagatcaaaattaacttttt 170  Q
    ||||| ||||||||| |||||||||||||||||    
T  22255536 tgaatcaaacattaaaatcaaaattaacttttt 22255568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 31786561 - 31786435
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||     
T  31786561 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatc 31786462  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| |||||||||||||||||    
T  31786461 aaacattaatatcaaaattaacttttt 31786435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 699410 - 699535
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  699410 ccaacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgattattaatcagtaattaacaatttaaaaatgaatc 699509  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    ||||||||||||||||||||||||||    
T  699510 aaacattaagatcaaaattaactttt 699535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 25889630 - 25889755
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  25889630 ccaacaataaaatagtacctgtaaatccaagatgttgaaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatt 25889729  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    ||||||||||||||||||||||||||    
T  25889730 aaacattaagatcaaaattaactttt 25889755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 24886344 - 24886473
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  24886344 attccaacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatga 24886443  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || |||||||||||||||||||||||||||    
T  24886444 atcaaacattaagatcaaaattaacttttt 24886473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 35826400 - 35826275
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |    
T  35826400 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatca 35826301  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  35826300 aacattaagatcaaaattaacttttt 35826275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 38528151 - 38528026
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  38528151 caacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 38528052  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| |||||||||||||||||    
T  38528051 aacattaaaatcaaaattaacttttt 38528026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 35511397 - 35511232
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||     
T  35511397 ccaacgataaaatagtacatgtaagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 35511298  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||||| ||||||||||||||||||       |||||||| |||||||||||||| ||||||||    
T  35511297 aaacattaaaatcaaaattaactttttt-aaaaaagtcagtttcctgactgcaccgtagaagctccc 35511232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 15992455 - 15992329
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||     
T  15992455 ccaacgataaaatagtaccggtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatc 15992356  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  15992355 aaacattaagattaaaattaacttttt 15992329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 39573071 - 39573197
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  39573071 ccaatgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 39573170  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  39573171 aaacattaagattaaaattaacttttt 39573197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 2888359 - 2888234
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  2888359 caacgataaaatagtacctgtaagtccaagatgttacaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 2888260  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| || ||||||||||||||    
T  2888259 aacattaaaattaaaattaacttttt 2888234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 41 - 169
Target Start/End: Original strand, 5830149 - 5830278
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg- 139  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  5830149 attccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 5830248  T
Q  140 aataaaacattaagatcaaaattaactttt 169  Q
    ||| ||||||||| ||||||||||||||||    
T  5830249 aatcaaacattaaaatcaaaattaactttt 5830278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 35504626 - 35504751
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  35504626 caacgataaaatagtacatgtaagtccaagatgttgcaagtattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatca 35504725  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| ||||||||| |||||||    
T  35504726 aacattaaaatcaaaattgacttttt 35504751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 22973991 - 22973871
Alignment:
Q  50 ataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacat 149  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  22973991 ataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacat 22973892  T
Q  150 taagatcaaaattaacttttt 170  Q
    |||||| ||||||||||||||    
T  22973891 taagattaaaattaacttttt 22973871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 22981053 - 22981218
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||     
T  22981053 ccaacgataaaatagtatatgtaagtccaagatgttgcaatcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatc 22981152  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||||||||||||||||||||||||       |||||||| ||||||||||| || ||||||||    
T  22981153 aaacattaagatcaaaattaactttttt-taaaaagtcagtttcctgactgcaccatagaagctccc 22981218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 8437225 - 8437351
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  8437225 ccaacgataaaatagtacctgtaagtccaagatgttgaaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatt 8437324  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||| ||||| |||||||||||||||||    
T  8437325 aaatattaaaatcaaaattaacttttt 8437351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 33908493 - 33908618
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||     
T  33908493 ccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagat-aattactattgatcattaatcagcaatcaacaatttaaaaatgaatc 33908591  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||||||||||||||||||    
T  33908592 aaacattaagatcaaaattaacttttt 33908618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 31705530 - 31705401
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||| ||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31705530 attccaaagataaaatagtacatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 31705431  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| || ||||||||||||||    
T  31705430 atcaaacattaaaataaaaattaacttttt 31705401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 7208782 - 7208653
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||| ||||| | |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7208782 attccaacgataaaatagtacatgtaagttcaagatgttgcaagtattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatga 7208683  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| || ||||||||||||||    
T  7208682 atcaaacattaaaataaaaattaacttttt 7208653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 8741799 - 8741674
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| |    
T  8741799 caacgataaaatagtacatgtaagtccaaaatgttgcaagcatcactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatca 8741700  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  8741699 aacattaagattaaaattaacttttt 8741674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 25669837 - 25669962
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  25669837 caacgataaaatagtacatgtaagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 25669936  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| || ||||||||||||||    
T  25669937 aacattaaaattaaaattaacttttt 25669962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 42342982 - 42343107
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||| || ||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |    
T  42342982 caacgataaaataggacatgtaagtctaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatca 42343081  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  42343082 aacattaagattaaaattaacttttt 42343107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 7693482 - 7693608
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||| ||| ||||| || |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |    
T  7693482 caacgataaaataatacttgtaagtctaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatca 7693581  T
Q  145 aacattaagatcaaaattaactttttt 171  Q
    |||||||| || |||||||||||||||    
T  7693582 aacattaaaattaaaattaactttttt 7693608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 19120119 - 19120245
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||||  || || |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||     
T  19120119 ccaacgataaaatagtacctcaaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtgatcaacaatttaaaaatgaatc 19120218  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| ||||||||||||||    
T  19120219 aatcattaagattaaaattaacttttt 19120245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 22019883 - 22020009
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||| ||| ||||| || ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  22019883 ccaacgataaaataatacttgtaagtctaagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 22019982  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||| |||||||| ||||||||||||||    
T  22019983 aaatattaagattaaaattaacttttt 22020009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 17157945 - 17157820
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |    
T  17157945 caacgataaaatagtacttttaagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatca 17157846  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| |||||| || |||||||    
T  17157845 aacattaaaatcaaacttgacttttt 17157820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 27330565 - 27330690
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||| ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |    
T  27330565 caacaataaaatggtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatca 27330664  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  27330665 aacattaagattaaaattaacttttt 27330690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 40133646 - 40133810
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||| ||  ||||| ||||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| |    
T  40133646 caacgataaaataatatttgtaagtccaagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatta 40133745  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||||||| ||||||||| |||||       |||| |||||||||||||||||| ||||||||    
T  40133746 aacattaagattaaaattaac-tttttcaaaaaagtcaattttctgactgcaccgtagaagctccc 40133810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 36867023 - 36867187
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||| ||  ||||| ||||||||||||||| ||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| |    
T  36867023 caacgataaaataatatttgtaagtccaagatgttgcaaacattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatta 36867122  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||||||||| |||||||||||||||       |||| |||||||||||||||||| ||||||||    
T  36867123 aacattaagattaaaattaactttttt-aaaaaagtcaattttctgactgcaccgtagaagctccc 36867187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 25500841 - 25500715
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||     
T  25500841 ccaacgataaaatagtacctgtaagtctaagatgttgcaagcattactagatgaaatactgttgatcattaatcagtaattaacaatttaaaaatgaatc 25500742  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||| | |||||| ||||||||||||||    
T  25500741 aaatactaagattaaaattaacttttt 25500715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 28416466 - 28416340
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||  ||||||||||||||||| ||||     
T  28416466 ccaacgataaaatagtacttttaagtccaagatgttgcaagcattacttgatgaattactattgatcattaatcaacaatcaacaatttaaaaaagaatc 28416367  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  28416366 aaacattaagattaaaattaacttttt 28416340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 12910615 - 12910740
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||| ||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||     
T  12910615 ccaacaatacaataatacatgtaagtccaagatgttgcaagcattactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatc 12910714  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    |||||||||||||| |||||||||||    
T  12910715 aaacattaagatcataattaactttt 12910740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 35934157 - 35934282
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| | |    
T  35934157 caacaataaaatagtaccggtaagtccaagatgttgcaagcattactagttgaattattattgatcattaatcagtaatcaacaatttaaaaatgattca 35934256  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| || ||||||||||||||    
T  35934257 aacattaaaattaaaattaacttttt 35934282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 43308578 - 43308449
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||    
T  43308578 attccgacaataaaatagtacctgtaagtcgaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaacga 43308479  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||| | ||| |||||||||||||||||    
T  43308478 atcaaatactaaaatcaaaattaacttttt 43308449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 9200484 - 9200610
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||| || ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  9200484 ccaacgataaaatagtatctataagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 9200583  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||  |||| || |||||||| |||||    
T  9200584 aaaatttaaaattaaaattaatttttt 9200610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 5837816 - 5837941
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |    
T  5837816 caacgacaaaatagtacctgcaagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcaataatcaacaatttaaaaatgaatca 5837915  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    | |||||| || ||||||||| ||||    
T  5837916 atcattaaaattaaaattaacctttt 5837941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 36860685 - 36860850
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||| ||  ||||| |||||||||||||||||||||||| ||||||||||||| || || ||| ||||||||||||||||||||||||| |    
T  36860685 caacgataaaataatatttgtaagtccaagatgttgcaagcattactaaatgaattactattaatcatgaattagtaatcaacaatttaaaaatgaatca 36860784  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccca 211  Q
    | ||||||||| |||||||||||||||       |||| |||||||||||||||||| |||| ||||    
T  36860785 agcattaagattaaaattaactttttt-aaaaaagtcaattttctgactgcaccgtagaagcaccca 36860850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 13956277 - 13956187
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaa 134  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13956277 ccaacgataaaatagtacctgttagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaa 13956187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 32563400 - 32563526
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| || ||||||||||||| |||||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||     
T  32563400 ccaacgataaaatagtacatgtaagtctaagatgttgcaagaattactagataaattattattgatcattaatcagcaattaacaatttaaaaatgaatc 32563499  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || ||||||||||||||    
T  32563500 aaacattaaaattaaaattaacttttt 32563526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 43254154 - 43254240
Alignment:
Q  83 agcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 169  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43254154 agcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 43254240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 14409255 - 14409130
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||| |||| |||| ||||||||||||||||||||||      
T  14409255 caacgataaaatagtacttgtaagtccaagatgttgcaaacattactaaatgaattactattgatcattattcagcaatcaacaatttaaaaatgaatcg 14409156  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| || |||||||| |||||    
T  14409155 aacattaaaattaaaattaaattttt 14409130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 8466988 - 8467112
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaa 145  Q
    |||||||||||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||    
T  8466988 aacgataaaatattatttgtaagtccaaaatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacagtttaaaaatgaatcaa 8467087  T
Q  146 acattaagatcaaaattaacttttt 170  Q
    ||||||| |  ||||||||||||||    
T  8467088 acattaaaaataaaattaacttttt 8467112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 23116136 - 23116019
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||         ||||||||| |||||||||||||||||||||||||||||||| |    
T  23116136 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactg--------actattgatcattaatcagtaatcaacaatttaaaaatgaatca 23116045  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| |||||||||||||||||    
T  23116044 aacattaaaatcaaaattaacttttt 23116019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 26269069 - 26269195
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| ||||||||||||||||||| |  ||||||||| ||||| |||||||| |||||||| |||| |||||||||||||||||||||||||||||||      
T  26269069 ccaaggataaaatagtacctgtaagtttaagatgttgtaagcaatactagataaattactactgatcattaatcagtaatcaacaatttaaaaatgaacc 26269168  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| ||||||||||||||    
T  26269169 aatcattaagattaaaattaacttttt 26269195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 15724749 - 15724874
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||| |||||||||||| ||||| ||||| || ||| ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| |    
T  15724749 caactataaaatagtacttgtaagtccaaaatattgtaagcattactagatgaattactattaatcattaatcaataatcaacaatttaaaaatgaatca 15724848  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||  | ||||||||||||||    
T  15724849 aacattaaagttaaaattaacttttt 15724874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 1429077 - 1428983
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaa---tcaacaatttaaa 135  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||    
T  1429077 ccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatattcaacaatttaaa 1428983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 30969238 - 30969112
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||| ||||||||||| || ||| | ||||||| |||||| |||||||||||| |||||||| || |||||||||||||| ||||||||||||||||| |    
T  30969238 caacaataaaatagtatctataagttcaagatgctgcaagtattactagatgagttactattaatcattaatcagtaatccacaatttaaaaatgaatca 30969139  T
Q  145 aacattaagatcaaaattaactttttt 171  Q
    |||||||| || |||||||||||||||    
T  30969138 aacattaaaattaaaattaactttttt 30969112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 27318376 - 27318237
Alignment:
Q  72 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaa-tttaaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| |||||||| |||||||||||||||| ||||||||  ||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  27318376 aagatgttgcaaacattactatatgaattactattgatcattaatcaaaaatcaacaattttaaaaatgaatcaaacattaagattaaaattaacttttt 27318277  T
Q  171 tnnnnnnngtcagttttctgactgcaccgtaaaagctccca 211  Q
    |       |||||||||||||||||||| || || ||||||    
T  27318276 t-aaaaaagtcagttttctgactgcaccatagaaactccca 27318237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 21088681 - 21088557
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||  | ||||||||||||||||||| ||||||||||||||||||||||||| || || ||| | ||||   ||||||||||||||||     
T  21088681 ccaacgataaaataacatctgtaaatccaagatgttgtaagcattactagatgaattactattaatcatgaataaataat---caatttaaaaatgaatc 21088585  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    |||||||||||| ||| |||| ||||||    
T  21088584 aaacattaagattaaagttaattttttt 21088557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 14919405 - 14919328
Alignment:
Q  92 agatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    ||||||||||| |||||| ||||||||| |||| | ||||||||||||||| ||||||||||||||||||||| |||||    
T  14919405 agatgaattac-attgatcattaatcagaaatctaaaatttaaaaatgaatcaaacattaagatcaaaattaatttttt 14919328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 23954651 - 23954591
Alignment:
Q  110 tattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  23954651 tattgatcattaatcaacaatttaaaaatgaattaaacattaagatcataattaacttttt 23954591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35504555 - 35504597
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatatt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35504555 aacaccccacaaagtgtaacacttaagactatcacataatatt 35504597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23116207 - 23116166
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23116207 aacaccccacaaagtgtaacacttaagactatcacataatat 23116166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27318472 - 27318431
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27318472 aacaccccacaaagtgtaacacttaagactatcacataatat 27318431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38528222 - 38528181
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38528222 aacaccccacaaagtgtaacacttaagactatcacataatat 38528181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7208849 - 7208807
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatatt 43  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  7208849 aacacctcacaaagtgtaacacttaagactatcacataatatt 7208807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17158016 - 17157974
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatatt 43  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  17158016 aacaccccacaaagtgtaacacttaagaccatcacataatatt 17157974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5830082 - 5830123
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  5830082 aacaccccacaaagtgtaacacttaaaactatcacataatat 5830123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12910545 - 12910586
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  12910545 aacaccccacaaagtgtaacacctaagactatcacataatat 12910586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19120049 - 19120090
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  19120049 aacaccccacaaagtgtaacacttaagactatcacatgatat 19120090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36860614 - 36860655
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  36860614 aacaccccacaaagtgtaacacttaaaactatcacataatat 36860655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36866952 - 36866993
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  36866952 aacaccccacaaagtgtaacacttaaaactatcacataatat 36866993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40133575 - 40133616
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  40133575 aacaccccacaaagtgtaacacttaaaactatcacataatat 40133616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 6824464 - 6824429
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcaca 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  6824464 aacaccccacaaagtgtaacacttaagactatcaca 6824429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 5837748 - 5837786
Alignment:
Q  4 accccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  5837748 accccacaaagtgtaacacttaagactatcacatgatat 5837786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 699340 - 699381
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  699340 aacactccacaaagtgtaatacttaagactatcacataatat 699381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21088751 - 21088710
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| ||||||||||||||||||||||| |||||||||||||    
T  21088751 aacatcccacaaagtgtaacacttaagattatcacataatat 21088710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22980983 - 22981024
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  22980983 aacacctcacaaaatgtaacacttaagactatcacataatat 22981024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23954774 - 23954733
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  23954774 aacacctcacaaaatgtaacacttaagactatcacataatat 23954733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26268264 - 26268305
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  26268264 aacaccgcacaaagtgtaacacttaagactatcacatgatat 26268305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30969309 - 30969268
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  30969309 aacacctcacaaagtgtaacacttaagactatcacatgatat 30969268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31786631 - 31786590
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  31786631 aacaccctacaaagtgtaacacttaaaactatcacataatat 31786590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33908423 - 33908464
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  33908423 aacaccccagaaagtgtaacacttaagactatcgcataatat 33908464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35934086 - 35934127
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  35934086 aacaccctacaaagtgtaacacttaagactatcacatgatat 35934127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 8437156 - 8437196
Alignment:
Q  2 acaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  8437156 acaccccacaatgtgtaacacttaagattatcacataatat 8437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8741871 - 8741835
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacat 37  Q
    ||||||| |||||||||||||||||||||||||||||    
T  8741871 aacaccctacaaagtgtaacacttaagactatcacat 8741835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 42
Target Start/End: Complemental strand, 1429136 - 1429106
Alignment:
Q  12 aagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||||    
T  1429136 aagtgtaacacttaagactatcacataatat 1429106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22974067 - 22974025
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatatt 43  Q
    |||||| |||||| |||||||||||||||||| ||||||||||    
T  22974067 aacacctcacaaaatgtaacacttaagactattacataatatt 22974025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 42
Target Start/End: Original strand, 24886288 - 24886318
Alignment:
Q  12 aagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||||    
T  24886288 aagtgtaacacttaagactatcacataatat 24886318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13956347 - 13956306
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| |||||| ||||||||||||||||||| |||||||    
T  13956347 aacaccctacaaagcgtaacacttaagactatcatataatat 13956306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14919513 - 14919472
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| |||||| ||||| ||||||||||||||||||||||    
T  14919513 aacacctcacaaattgtaatacttaagactatcacataatat 14919472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15992525 - 15992484
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||    
T  15992525 aacaccccacaaagtgtcacacttaagactatcgcatgatat 15992484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22255372 - 22255413
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| ||||||||||||||||||| ||||| |||||||||    
T  22255372 aacaccacacaaagtgtaacacttaaaactattacataatat 22255413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25500911 - 25500870
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||  ||||||| ||||    
T  25500911 aacaccccacaaagtgtaacacttaagatcatcacatgatat 25500870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 6824391 - 6824331
Alignment:
Q  49 gataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgat 109  Q
    ||||||| | ||| ||||| || |||||||||||||||| |||||||||  ||||||||||    
T  6824391 gataaaacaatacatgtaagtctaagatgttgcaagcatcactagatgagatactattgat 6824331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 41 - 210
Target Start/End: Original strand, 32216308 - 32216476
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||| ||  ||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32216308 attccaacgataaaataatatttgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 32216407  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || ||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||    
T  32216408 atcaaacattaagatcaaaattaactttttt-aaaaaagtcagttttctgactgcaccgtagaagctccc 32216476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 15383186 - 15383316
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg- 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  15383186 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagcaatcaacaatttaaaaatga 15383285  T
Q  140 aataaaacattaagatcaaaattaacttttt 170  Q
    ||| ||||||||| |||||||||||||||||    
T  15383286 aatcaaacattaaaatcaaaattaacttttt 15383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 2960004 - 2960130
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  2960004 ccaacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 2960103  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| |||||||||||||||||    
T  2960104 aaacattaaaatcaaaattaacttttt 2960130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 30254676 - 30254806
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30254676 attccaacgataaaataatacatgtaagtccaagatgttgcaagcattactagatgaattactattgattattaatcaataatcaacaatttaaaaatga 30254775  T
Q  141 ataaaacattaagatcaaaattaactttttt 171  Q
    || ||||||||| ||||||||||||||||||    
T  30254776 atcaaacattaaaatcaaaattaactttttt 30254806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 11742287 - 11742162
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  11742287 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 11742188  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  11742187 aacattaagattaaaattaacttttt 11742162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 10922989 - 10923148
Alignment:
Q  50 ataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacat 149  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  10922989 ataaaatagtatctgtaagtccaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacat 10923088  T
Q  150 taagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    |||||||||||||||| |||||       |||||||||||||||||||| || ||||||||    
T  10923089 taagatcaaaattaac-tttttcaaaagagtcagttttctgactgcaccatagaagctccc 10923148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 23999604 - 23999731
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||     
T  23999604 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 23999703  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    ||||||||| ||||||||||||||||||    
T  23999704 aaacattaaaatcaaaattaactttttt 23999731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 38 - 210
Target Start/End: Original strand, 32267284 - 32267455
Alignment:
Q  38 aatattccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaa 137  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  32267284 aatattccaactataaaatagtacctgtaggtccaagatgttgcaagcattactagatgaattactattgaacattaatcagtaatcaacaatttaaaaa 32267383  T
Q  138 tgaataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||||| ||||||||| ||||||||||| ||||||       |||| ||| |||||||||||||| ||||||||    
T  32267384 tgaatcaaacattaaaatcaaaattaa-ttttttcaaaaaagtcaatttcctgactgcaccgtagaagctccc 32267455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 39393640 - 39393767
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39393640 ccaatgataaaatagtaccggtaaatccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaata 39393739  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    ||||||||| || |||||||||||||||    
T  39393740 aaacattaaaattaaaattaactttttt 39393767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 44 - 220
Target Start/End: Complemental strand, 34012302 - 34012128
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||  ||||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||     
T  34012302 ccaacgataaaatagtatatgtaagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 34012203  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaataaacaaa 220  Q
    ||||||||| ||||||||||||||||||       |||||||| |||||||||||||| |||||||| |||||||||    
T  34012202 aaacattaaaatcaaaattaactttttt-aaaaaagtcagtttcctgactgcaccgtagaagctccc-ataaacaaa 34012128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 16415902 - 16416027
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  16415902 ccaacgataaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 16416001  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    ||||||||||||||||||||| ||||    
T  16416002 aaacattaagatcaaaattaattttt 16416027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 19899692 - 19899563
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  19899692 attccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatg 19899593  T
Q  140 aataaaacattaagatcaaaattaactttt 169  Q
    ||| ||||||||| ||||||||||||||||    
T  19899592 aatcaaacattaaaatcaaaattaactttt 19899563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 37451538 - 37451667
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37451538 attccaacgataaaatagtatctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 37451637  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| || ||||||||||||||    
T  37451638 atcaaacattaaaataaaaattaacttttt 37451667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 27227404 - 27227280
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |    
T  27227404 caacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaccatttaaaaatgaatta 27227305  T
Q  145 aacattaagatcaaaattaactttt 169  Q
    |||||||| ||||||||||||||||    
T  27227304 aacattaatatcaaaattaactttt 27227280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 1547527 - 1547653
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||     
T  1547527 ccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatc 1547626  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| |||||||| |||||    
T  1547627 aaacattaagattaaaattaatttttt 1547653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 14758288 - 14758414
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||     
T  14758288 ccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatc 14758387  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
     ||||||||||||||||||||||||||    
T  14758388 gaacattaagatcaaaattaacttttt 14758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 27532901 - 27532776
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||     
T  27532901 ccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaa-ttaaaaatgaatc 27532803  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  27532802 aaacattaagattaaaattaacttttt 27532776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 46931666 - 46931792
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||     
T  46931666 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatattattgatcattaatcagtaatcaacaatttaaaaatgaatc 46931765  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| |||||||||||||||||    
T  46931766 aaacattaaaatcaaaattaacttttt 46931792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 45 - 167
Target Start/End: Complemental strand, 47682413 - 47682291
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| |||| |    
T  47682413 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactaaatgaattactattgatcattaatcagtaattaacaatttaaaaaagaatta 47682314  T
Q  145 aacattaagatcaaaattaactt 167  Q
    ||||||||||| |||||||||||    
T  47682313 aacattaagattaaaattaactt 47682291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 41 - 210
Target Start/End: Original strand, 8222381 - 8222549
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg- 139  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||     
T  8222381 attccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaatta-tattgatcattaatcagtaatcaacaatttaaaaatga 8222479  T
Q  140 aataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||| ||||||||| |||||||||||| |||||       |||||||||||||||| |||||| ||||||||    
T  8222480 aatcaaacattaaaatcaaaattaac-tttttcaaaaaagtcagttttctgactgtaccgtagaagctccc 8222549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 48353799 - 48353924
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |    
T  48353799 caacgataaaatagtatctgtaagtccaagatattgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatca 48353898  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  48353899 aacattaagattaaaattaacttttt 48353924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 27267119 - 27266995
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |    
T  27267119 caacgataaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgataattaatcaataatcaataatttaaaaatgaatta 27267020  T
Q  145 aacattaagatcaaaattaactttt 169  Q
    |||||||||||||||||||||||||    
T  27267019 aacattaagatcaaaattaactttt 27266995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 25160885 - 25161016
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg- 139  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||     
T  25160885 attccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 25160984  T
Q  140 aataaaacattaagatcaaaattaactttttt 171  Q
    ||| ||||||||| |||||||||||| |||||    
T  25160985 aatcaaacattaaaatcaaaattaaccttttt 25161016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 3535179 - 3535305
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||     
T  3535179 ccaacgataaaatagtacctttaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatc 3535278  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| |||| |||||||||    
T  3535279 aaacattaagattaaaactaacttttt 3535305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 27763234 - 27763104
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    |||||||||||||||||||| |||||| | ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||    
T  27763234 attccaacgataaaatagtatctgtaagttcaagatgttgcaagcattactagataaatatactattgatcattaatcagtaatcaacaatttaaaaatg 27763135  T
Q  140 aataaaacattaagatcaaaattaacttttt 170  Q
    ||| ||||||||| |||||||||||||||||    
T  27763134 aatcaaacattaaaatcaaaattaacttttt 27763104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 1359858 - 1359691
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  1359858 attccaacgataaaatagtacctgtaagttcaaaatgttgcaagcattactggatgaattactatcgatcattaatcagtaatcaacaatttaaaaatga 1359759  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || |||||||||||||||| ||   ||||||       ||||||||||||||||||||||| ||| ||||    
T  1359758 atcaaacattaagatcaaattt--tttttttttaacaagtcagttttctgactgcaccgtagaagatccc 1359691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 9902973 - 9902848
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  9902973 caacgataaaatagtaccagtaagtccaagatgctgcaagcactactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 9902874  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    || ||||| |||||||||||||||||    
T  9902873 aatattaaaatcaaaattaacttttt 9902848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 15168353 - 15168478
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||      
T  15168353 caacgataaaatagtacatgtaagtacaagatgttgcaagcattattagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcg 15168452  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  15168453 aacattaagatcaaaattaacttttt 15168478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 28564702 - 28564577
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |    
T  28564702 caacgataaaataatacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatca 28564603  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| |||||||||||||||||    
T  28564602 aacattaaaatcaaaattaacttttt 28564577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 47279445 - 47279611
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||| ||||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||     
T  47279445 ccaacaataaaatagtatctgtaagtccaagatgttgcaaacattattagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatc 47279544  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    |||||||||||| ||||||||||||||         |||||||| ||||||||||||| ||||||||    
T  47279545 aaacattaagattaaaattaactttttcaaaaaaaatcagttttatgactgcaccgtagaagctccc 47279611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 3309409 - 3309536
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  3309409 ccaacgataaaatagtacccgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 3309508  T
Q  144 aaacattaaga-tcaaaattaacttttt 170  Q
    ||||||| ||| | ||||||||||||||    
T  3309509 aaacatttagatttaaaattaacttttt 3309536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 38823470 - 38823597
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||| ||||||||| || || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||      
T  38823470 ccaacgataaaataatacctgtaagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaac 38823569  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    ||| |||||||| |||||||||||||||    
T  38823570 aaatattaagattaaaattaactttttt 38823597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 211
Target Start/End: Original strand, 15752282 - 15752451
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    |||||||||| |||||| ||| ||||| ||||||| |||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15752282 attccaacgacaaaataatacatgtaagtccaagaagttgcaatttttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 15752381  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccca 211  Q
    || ||||||||||||||||||||| ||||||        ||| |||||||||||||||||| |||||||||    
T  15752382 attaaacattaagatcaaaattaa-ttttttttaaaaaatcaattttctgactgcaccgtagaagctccca 15752451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 28769910 - 28770035
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||| | ||||||||||||||||||||||| |    
T  28769910 caacgataaaatagtacctgtaagtccaagatgttgcaaacattgctagatgaattactattgatcattaattaataatcaacaatttaaaaatgaatca 28770009  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| || ||||||||||||||    
T  28770010 aacattaaaattaaaattaacttttt 28770035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 4330542 - 4330662
Alignment:
Q  49 gataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaaca 148  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||||    
T  4330542 gataaaatagtacttgtaagtccaatatgttgcaagcattactagatgaattacaattgatcattaatcagtaatcaacaatataaaaatgaatcaaaca 4330641  T
Q  149 ttaagatcaaaattaactttt 169  Q
    |||||||||||||||| ||||    
T  4330642 ttaagatcaaaattaattttt 4330662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 27563823 - 27563700
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaa 145  Q
    |||||||||||||||  ||||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||| ||    
T  27563823 aacgataaaatagtatatgtaagtccaagatgttgcaagtattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaaagaatcaa 27563724  T
Q  146 acattaagatcaaaattaactttt 169  Q
    |||||||||||| |||||||||||    
T  27563723 acattaagatcataattaactttt 27563700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 238433 - 238307
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||||     
T  238433 ccaacgataaaataatatctgtaagtccaagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatccacaatttaaaaatgaatc 238334  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||| ||||||||    
T  238333 aaacattaagattaaaatcaacttttt 238307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 51129116 - 51129239
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  51129116 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 51129215  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |  ||||| ||  |||||||||||||    
T  51129216 agtattaaaat--aaattaacttttt 51129239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 21289856 - 21289981
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||  || | ||| ||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||     
T  21289856 ccaacgataaaataacacttataagtccaagatgttgcaaacattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatc 21289955  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    ||||||||||||||||||||| ||||    
T  21289956 aaacattaagatcaaaattaattttt 21289981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 7078983 - 7078857
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||  ||||| || ||||| |||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||     
T  7078983 ccaacgataaaatagtatatgtaagtctaagatattgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatc 7078884  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| ||||||||||||||    
T  7078883 aatcattaagattaaaattaacttttt 7078857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 30326875 - 30326751
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg- 139  Q
    ||||||||||||||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||     
T  30326875 attccaacgataaaataatacatttaagtccaagatgttgcaagcattactagatgaattactattgatcatcaatcagtaatcaacaatttaaaaatga 30326776  T
Q  140 aataaaacattaagatcaaaattaa 164  Q
    ||| ||| ||||| |||||||||||    
T  30326775 aatcaaatattaaaatcaaaattaa 30326751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 42721293 - 42721419
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||| ||| ||||| |||||||||||||||  |||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||| |    
T  42721293 caacgataaaatattacatgtaagtccaagatgttgcaattattactagattaattactattgatcattaatgagtaatcaataatttaaaaatgaatca 42721392  T
Q  145 aacattaagatcaaaattaactttttt 171  Q
    |||||||| |||| |||||||||||||    
T  42721393 aacattaaaatcataattaactttttt 42721419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 10181927 - 10181802
Alignment:
Q  45 caacgataaaatagtacct-gtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| ||| |||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||     
T  10181927 caacaatacaatagtaccttgtaagtccaaaatgttgcaagcattactagatgaattactattgaacattaatcaacaatcaacaatttaaaaatgaatc 10181828  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    |||||||||||||| |||||||||||    
T  10181827 aaacattaagatcataattaactttt 10181802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 31621469 - 31621342
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaattta-aaaatgaat 142  Q
    |||||||||||||||||| ||||| | ||| ||||||||||||||| |||||||| |||||||||| ||||||||  ||||||||||||| |||||||||    
T  31621469 ccaacgataaaatagtacatgtaagttcaatatgttgcaagcattagtagatgaactactattgatcattaatcatcaatcaacaatttaaaaaatgaat 31621370  T
Q  143 aaaacattaagatcaaaattaacttttt 170  Q
      ||||||||||||||||||||||||||    
T  31621369 cgaacattaagatcaaaattaacttttt 31621342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 22170968 - 22171093
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||| | | ||||| || |||||||||||| ||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||| ||| |    
T  22170968 caacgataaaataattcttgtaagtctaagatgttgcaaacattattagataaattactattgatcattaattagtaatcaacaatttaaaaataaatca 22171067  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| |||||||||||||||||    
T  22171068 aacattaaaatcaaaattaacttttt 22171093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 37618824 - 37618729
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaa 136  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| ||||||  |||||||| |||||||||||||||||    
T  37618824 attccaacgataaaataatacatgtaagtccaagatgttgcaagcattactagatgaattagtattgaccattaatcaataatcaacaatttaaaa 37618729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 31962873 - 31962999
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaa-tttaaaaatgaata 143  Q
    ||||||||||||| ||  ||||| |  |||||||||||||||||| |||||||| |||||||||| ||||||| ||||||||||| ||||||||| |||     
T  31962873 caacgataaaataatatatgtaagtttaagatgttgcaagcattattagatgaactactattgatcattaatcggtaatcaacaattttaaaaataaatc 31962972  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||||||||    
T  31962973 aaacattaagattaaaattaacttttt 31962999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 40885074 - 40885167
Alignment:
Q  49 gataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaat 142  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| || |||||| |||| ||||||||||    
T  40885074 gataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaattagcaatcaataattcaaaaatgaat 40885167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 41926413 - 41926537
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||| |||||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||| |||||| | |||||||  |||||||| |||||     
T  41926413 ccaacaataaaatagtacttgtaagtccaagatatt-caagcattactagatgaattactattgatcattaattaataatcaatgatttaaaattgaatc 41926511  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    ||||||||| |||| |||||| ||||    
T  41926512 aaacattaaaatcataattaattttt 41926537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 18422904 - 18423006
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||| || || ||||| |||||||||||||||||||| ||||||||||||||||||       |||| |||||||||||||||||||||    
T  18422904 attccaacgataaaaaagcacatgtaagtccaagatgttgcaagcattgctagatgaattactattg-------atcattaatcaacaatttaaaaatga 18422996  T
Q  141 ataaaacatt 150  Q
    || |||||||    
T  18422997 atcaaacatt 18423006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 238503 - 238462
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  238503 aacaccccacaaagtgtaacacttaagactatcacataatat 238462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10181998 - 10181957
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10181998 aacaccccacaaagtgtaacacttaagactatcacataatat 10181957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18422837 - 18422878
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18422837 aacaccccacaaagtgtaacacttaagactatcacataatat 18422878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22170897 - 22170938
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22170897 aacaccccacaaagtgtaacacttaagactatcacataatat 22170938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32216241 - 32216282
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32216241 aacaccccacaaagtgtaacacttaagactatcacataatat 32216282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 33725478 - 33725405
Alignment:
Q  98 attactattgattattaatcagtaatcaacaatt-taaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| ||||||||| |||||||||||  ||||||||||  ||||||||||||||||| ||||||||    
T  33725478 attactattgatcattaatcagcaatcaacaattaaaaaaatgaatcgaacattaagatcaaaataaacttttt 33725405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 48620911 - 48620971
Alignment:
Q  110 tattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    |||| |||| ||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  48620911 tattgatcattaatcaacaattttaaaatgaatcaaacattaagattaaaattaacttttt 48620971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4330467 - 4330508
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  4330467 aacaccccacaaaatgtaacacttaagactatcacataatat 4330508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8222314 - 8222355
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  8222314 aacaccccacaaagtgtaacacttaaaactatcacataatat 8222355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9903044 - 9903003
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  9903044 aacaccccacaaaatgtaacacttaagactatcacataatat 9903003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15383119 - 15383160
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  15383119 aacaccccacaaagtgtaacacttaaaactatcacataatat 15383160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19899759 - 19899718
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  19899759 aacaccctacaaagtgtaacacttaagactatcacataatat 19899718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23999533 - 23999574
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  23999533 aacaccctacaaagtgtaacacttaagactatcacataatat 23999574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27267190 - 27267149
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  27267190 aacaccccacaaagtgcaacacttaagactatcacataatat 27267149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30326942 - 30326901
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  30326942 aacaccccacaaagtgtaacacttaaaactatcacataatat 30326901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46931595 - 46931636
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  46931595 aacaccctacaaagtgtaacacttaagactatcacataatat 46931636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2959934 - 2959975
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| |||||||| ||||||||||||||||||||||||||||    
T  2959934 aacatcccacaaattgtaacacttaagactatcacataatat 2959975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10922913 - 10922954
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  10922913 aacacctcacaaagtgtaacacttaagactgtcacataatat 10922954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15752215 - 15752256
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  15752215 aacaccccataaagtgtaacacttaagagtatcacataatat 15752256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25160818 - 25160859
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  25160818 aacaccccacaaagtataacacttaaaactatcacataatat 25160859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27227475 - 27227434
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  27227475 aacaccccacaaagtgcaacacttaagactatcacatgatat 27227434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27763301 - 27763260
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  27763301 aacaccctacaaagtgtaatacttaagactatcacataatat 27763260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 28769843 - 28769880
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||| |||||||||||||||||||||    
T  28769843 ccccacaaagtgtaacgcttaagactatcacataatat 28769880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32267220 - 32267261
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  32267220 aacactccacaaagtgtaacactcaagactatcacataatat 32267261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37451471 - 37451512
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| || ||||||||||||||||||||||||||||||||    
T  37451471 aacacctcaaaaagtgtaacacttaagactatcacataatat 37451512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38759719 - 38759760
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  38759719 aacaccccacaaagtgtaacacttgagactatcagataatat 38759760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38823400 - 38823441
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  38823400 aacacccaacaaagtgtaacacttaagactatcacatgatat 38823441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47682484 - 47682443
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  47682484 aacacctcacaaagtgtaacacttaagactatcatataatat 47682443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51129045 - 51129086
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  51129045 aacaccccacaaagtgtaacaattaaaactatcacataatat 51129086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 38759790 - 38759846
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaatta 101  Q
    |||| |||||||| ||  ||||| ||||||||||||||||||||||||||| |||||    
T  38759790 caactataaaataatatatgtaactccaagatgttgcaagcattactagattaatta 38759846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7079053 - 7079012
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||    
T  7079053 aacaccccacaaagtataagacttaagactatcacatgatat 7079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27532971 - 27532930
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| |||||||||||||||| ||||||||||||| ||||    
T  27532971 aacacctcacaaagtgtaacactcaagactatcacatgatat 27532930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33725590 - 33725549
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||    
T  33725590 aacaccccagaaagtgtaacatttaagactatcgcataatat 33725549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47279375 - 47279416
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||| |||| ||||||||||||||||||||||||||| ||||    
T  47279375 aacatcccataaagtgtaacacttaagactatcacatgatat 47279416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1547465 - 1547501
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacat 37  Q
    ||||||||||||||||||||||| || ||||||||||    
T  1547465 aacaccccacaaagtgtaacactcaaaactatcacat 1547501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30254609 - 30254649
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataata 41  Q
    ||||||| | |||||||||||||||||||| ||||||||||    
T  30254609 aacaccctataaagtgtaacacttaagactgtcacataata 30254649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 8e-55; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 1149566 - 1149398
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  1149566 attccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcggtaatcaacaatttaaaaatga 1149467  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || ||||||||| ||||||||||| ||||||       |||| ||| |||||||||||||| ||||||||    
T  1149466 atcaaacattaaaatcaaaattaa-ttttttcaaaaaagtcaatttcctgactgcaccgtagaagctccc 1149398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 16446806 - 16446641
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  16446806 ccaatgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 16446707  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
     |||||||| ||||||||||||| ||||       |||||||| |||||||||||||| ||||||||    
T  16446706 taacattaaaatcaaaattaact-ttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 16446641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 23854365 - 23854236
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  23854365 attccgacaataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatga 23854266  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || |||||||||||||||||||||||||||    
T  23854265 atcaaacattaagatcaaaattaacttttt 23854236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 43643529 - 43643361
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||| || |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  43643529 attccgacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatga 43643430  T
Q  141 ataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || ||||||||||||||||||||||| ||||       |||||||||||||||||||| || ||||||||    
T  43643429 atcaaacattaagatcaaaattaact-ttttcaaaaaagtcagttttctgactgcaccatagaagctccc 43643361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 4132617 - 4132492
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||     
T  4132617 ccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatttgtaatcaacaatttaaaaatgaatt 4132518  T
Q  144 aaacattaagatcaaaattaactttt 169  Q
    | ||||||||||||||||||||||||    
T  4132517 acacattaagatcaaaattaactttt 4132492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 5299876 - 5299751
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |    
T  5299876 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatta 5299777  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  5299776 aacattaagattaaaattaacttttt 5299751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 7890891 - 7890762
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7890891 attccaacgataaaatagtacatgtaagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 7890792  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||| |||||||||||||||||||||||    
T  7890791 atcaaatattaagatcaaaattaacttttt 7890762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 37970444 - 37970324
Alignment:
Q  50 ataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacat 149  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||||||    
T  37970444 ataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcagaaatcaacaatttaaaaatgaatcaaacat 37970345  T
Q  150 taagatcaaaattaacttttt 170  Q
    |||||||||||||||||||||    
T  37970344 taagatcaaaattaacttttt 37970324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 24823325 - 24823198
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||     
T  24823325 ccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaataaatc 24823226  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    |||||||||||| |||||||||||||||    
T  24823225 aaacattaagattaaaattaactttttt 24823198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 16223119 - 16223249
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||| ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16223119 attccaatgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 16223218  T
Q  141 ataaaacattaagatcaaaattaactttttt 171  Q
    || ||||||||| ||||||||||| ||||||    
T  16223219 atcaaacattaaaatcaaaattaattttttt 16223249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 49 - 212
Target Start/End: Original strand, 38644242 - 38644404
Alignment:
Q  49 gataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaaca 148  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  38644242 gataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaaaatttaaaaataaatcaaaca 38644341  T
Q  149 ttaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    ||||||| ||||||||| |||||       ||||||||  ||||||||||||||||||||||||    
T  38644342 ttaagattaaaattaac-tttttcaaaaaagtcagtttcatgactgcaccgtaaaagctcccaa 38644404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 1953918 - 1953793
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||||| |    
T  1953918 caacgataaaatagtacctgtaaatccaagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaattttaaaatgaatca 1953819  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||||||||||||||| |||||    
T  1953818 aacattaagatcaaaattaatttttt 1953793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 12587842 - 12587967
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |    
T  12587842 caacgataaaatagtacctgtaagtcaaagattttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatca 12587941  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||||||||||||||| |||||    
T  12587942 aacattaagatcaaaattaatttttt 12587967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 27082768 - 27082643
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||| |    
T  27082768 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactacttatcattaatcaataatcaacaatttaaaaatgaatta 27082669  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||||||||||||||||||    
T  27082668 aacattaagatcaaaattaacttttt 27082643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 1205188 - 1205353
Alignment:
Q  46 aacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaa 145  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||    
T  1205188 aacgataaaatagtacctgtaagtccaagatgttgcaagtattactagatgaattactattgatcattaatcactaatcagcaatttaaaaatgaatcaa 1205287  T
Q  146 acattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    |||  |||||||||||||||||||||       |||| |||||||||| ||||||| ||||||||||    
T  1205288 acaacaagatcaaaattaactttttt-aaaaaagtcaattttctgactacaccgtagaagctcccaa 1205353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 44 - 167
Target Start/End: Original strand, 466091 - 466214
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||| ||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  466091 ccaatgataaaataatacctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 466190  T
Q  144 aaacattaagatcaaaattaactt 167  Q
    |||||||||||| |||||||||||    
T  466191 aaacattaagattaaaattaactt 466214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 41 - 212
Target Start/End: Complemental strand, 8803751 - 8803580
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  8803751 attccaacgataaaatagtacatgtaagtccaagatgttgcaagcattaccagatgaatatactattgatcattaatcagtaatgaacaatttaaaaatg 8803652  T
Q  140 aataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 212  Q
    ||| ||||||||| ||||||||||||| ||||       |||| ||| ||||||||||||||||| |||||||    
T  8803651 aatcaaacattaaaatcaaaattaact-ttttcaaaaaagtcaatttcctgactgcaccgtaaaaactcccaa 8803580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 34895221 - 34895348
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||| |||||||||| ||||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||     
T  34895221 ccaacgaaaaaatagtacatgtaagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 34895320  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    ||||||||| ||||||||||||||||||    
T  34895321 aaacattaaaatcaaaattaactttttt 34895348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 35859193 - 35859319
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| | | ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||     
T  35859193 ccaacgataaaatagtacttgtaagttcgagatgttgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatc 35859292  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| |||||||||||||||||    
T  35859293 aaacattaaaatcaaaattaacttttt 35859319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 11727283 - 11727449
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  11727283 ccaacgataaaatagtatatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 11727382  T
Q  144 aaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    ||  |||||||| |||||||||||||||       |||| |||  ||||||||||||| ||||||||    
T  11727383 aattattaagattaaaattaacttttttaaaaaatgtcaatttcatgactgcaccgtagaagctccc 11727449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 35459636 - 35459516
Alignment:
Q  50 ataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacat 149  Q
    ||||||||||| |||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  35459636 ataaaatagtatctgtaagtccaaaatgttgcaaacattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacat 35459537  T
Q  150 taagatcaaaattaacttttt 170  Q
    |||||||||||||||||||||    
T  35459536 taagatcaaaattaacttttt 35459516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 33198031 - 33198187
Alignment:
Q  12 aagtgtaacacttaagactatcacataatattccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgatta 111  Q
    ||||||||||||||| |||||||||| ||   |||||||||||||||||| ||||| || || ||||||||||||| ||||||||||||||||||||| |    
T  33198031 aagtgtaacacttaaaactatcacatgatg--ccaacgataaaatagtacatgtaagtctaaaatgttgcaagcatcactagatgaattactattgatca 33198128  T
Q  112 ttaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 170  Q
    ||||||| ||||||||||||||||||||||| || ||||||||| || |||||||||||    
T  33198129 ttaatcaataatcaacaatttaaaaatgaatcaatcattaagattaagattaacttttt 33198187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 34951987 - 34951862
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| || |||||||||||||  |||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  34951987 caacgataaaatagtacatgtaagtctaagatgttgcaagtcttactacatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 34951888  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    ||||||||||| ||||||||||||||    
T  34951887 aacattaagattaaaattaacttttt 34951862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 44869757 - 44869882
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||||  ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |    
T  44869757 caacgataaaatagtaccgataagtccaagatattgcaagcattactagatgaattactattgatcattaatcagtaaccaacaatttaaaaatgaatca 44869856  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| || ||||||||||||||    
T  44869857 aacattaaaattaaaattaacttttt 44869882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 6098434 - 6098320
Alignment:
Q  54 aatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaag 153  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  6098434 aatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaag 6098335  T
Q  154 atcaaaattaacttt 168  Q
    ||||  |||||||||    
T  6098334 atcatgattaacttt 6098320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 33906472 - 33906634
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||  |||||||||||||||      
T  33906472 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatca--aatttaaaaatgaatcg 33906569  T
Q  145 aacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 210  Q
    || | |||||||||||||||| |||||       ||||||||||||||||||| ||| ||||||||    
T  33906570 aatagtaagatcaaaattaac-tttttcaaaaaagtcagttttctgactgcactgtagaagctccc 33906634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 1149854 - 1149756
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1149854 attccaacgataaaatagtacttgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg 1149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 41 - 211
Target Start/End: Complemental strand, 10555138 - 10554969
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaatt--actattgattattaatcagtaatcaacaatttaaaaat 138  Q
    ||||| || |||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||| ||||   |||||| ||||||||||||||    
T  10555138 attccgacaataaaatagtacctgtaagtccaagatattgcaagcattactagatgaattacactattgatcatta---agtaataaacaatttaaaaat 10555042  T
Q  139 gaataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgcaccgtaaaagctccca 211  Q
    |||| ||||||||||||||||||||| ||||||       |||| ||||||||| ||||| || |||||||||    
T  10555041 gaatcaaacattaagatcaaaattaatttttttcaaaaaagtcaattttctgaccgcaccatagaagctccca 10554969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 30654513 - 30654388
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| || ||||||| ||||||||||||| |||||||| |||||||||     
T  30654513 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactaaatgaatatattattgatcattaatcagtaattaacaattt-aaaatgaatc 30654415  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||| ||||| |||||||||||||||||    
T  30654414 aaatattaaaatcaaaattaacttttt 30654388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 36694897 - 36694771
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| || || ||| ||||||||| ||||||||||| |||     
T  36694897 ccaacgataaaatagtacatgtaaatccaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaataaatc 36694798  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||||||||| || |||| |||||||||    
T  36694797 aaacattaaaattaaaagtaacttttt 36694771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 40862679 - 40862805
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaattt-aaaaatgaata 143  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  | || ||||||||||| ||||||| ||||||||||     
T  40862679 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactatttgtcataaatcagtaatcgacaatttaaaaaatgaatc 40862778  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    |||||||||||| |||| |||||||||    
T  40862779 aaacattaagattaaaagtaacttttt 40862805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 31933820 - 31933691
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    |||||||| |||||||||||| ||||| || ||||| |||||  ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  31933820 attccaacaataaaatagtacttgtaagtctaagatattgcagacattactagatgaattattattgatcattaatcagtaatcaacgatttaaaaatga 31933721  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||| ||||||||||||||||| |||||    
T  31933720 atcaaatattaagatcaaaattaatttttt 31933691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 39099049 - 39098923
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||| || |    
T  39099049 caacgataaaatagtatatgtaagtccaaaatgttgcaagcattactagatgaattactattgatcattaattaataatcaataatttaaaaatgcatca 39098950  T
Q  145 aacattaagatcaaaattaactttttt 171  Q
    |||||||| || |||||||| ||||||    
T  39098949 aacattaaaattaaaattaattttttt 39098923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 18259339 - 18259464
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| | ||||| | |||| ||||||||||||||||||||||||| |    
T  18259339 caacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattattgttgatcagtaatgagtaatcaacaatttaaaaatgaatca 18259438  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    | |||||| || ||||||||| ||||    
T  18259439 atcattaaaattaaaattaacctttt 18259464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 41362723 - 41362845
Alignment:
Q  86 attactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnnnnnngtcagtt 185  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||       |||||||    
T  41362723 attactagatgaattactattgatcattaaccagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaa-ttttttcaaaaaagtcagtt 41362821  T
Q  186 ttctgactgcaccgtaaaagctcc 209  Q
    | ||||||||||| || |||||||    
T  41362822 tcctgactgcaccatagaagctcc 41362845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 9864407 - 9864505
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaat 142  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| | || || |||| ||||||||||||||||||||||||    
T  9864407 ccaacgataaaatagtacctgtaagttcaagatgttgcaagcattactagatgaataactagtaatcatgaatcggtaatcaacaatttaaaaatgaat 9864505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 12876370 - 12876496
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| || || ||| ||||||||||| ||| ||||| ||| |    
T  12876370 caacgataaaatagtacatgtaagtccaagatgttacaggcattactagatgaattactatttatcatgaataagtaatcaacagtttgaaaataaatca 12876469  T
Q  145 aacattaagatcaaaattaactttttt 171  Q
    |||||||| || |||| ||||||||||    
T  12876470 aacattaaaattaaaagtaactttttt 12876496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 43025974 - 43026060
Alignment:
Q  85 cattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 171  Q
    ||||| ||||| ||||||||||||| || ||||||| ||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  43025974 cattattagataaattactattgatcatgaatcagtgatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttt 43026060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1149633 - 1149591
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatatt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1149633 aacaccccacaaagtgtaacacttaagactatcacataatatt 1149591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6098519 - 6098478
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6098519 aacaccccacaaagtgtaacacttaagactatcacataatat 6098478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9864337 - 9864378
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9864337 aacaccccacaaagtgtaacacttaagactatcacataatat 9864378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36694967 - 36694926
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36694967 aacaccccacaaagtgtaacacttaagactatcacataatat 36694926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37970520 - 37970479
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37970520 aacaccccacaaagtgtaacacttaagactatcacataatat 37970479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 13307882 - 13307936
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat 99  Q
    |||||||||||||||||| |||| | |||||||||||||||||||| ||||||||    
T  13307882 caacgataaaatagtacccgtaagttcaagatgttgcaagcattacaagatgaat 13307936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40862608 - 40862650
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatatt 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  40862608 aacactccacaaagtgtaacacttaagactatcacataatatt 40862650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43643596 - 43643554
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatatt 43  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  43643596 aacacctcacaaagtgtaacacttaagactatcacataatatt 43643554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1205116 - 1205157
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  1205116 aacaccccacaaagtgtaacacttaagactatcgcataatat 1205157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4132687 - 4132646
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  4132687 aacaccccacaaagtgtaacacataagactatcacataatat 4132646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13307812 - 13307853
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  13307812 aacaccccacaaagtgtaacacttaagactatcacatgatat 13307853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16446876 - 16446835
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  16446876 aacaccccacaaagcgtaacacttaagactatcacataatat 16446835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27082839 - 27082798
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  27082839 aacaccccgcaaagtgtaacacttaagactatcacataatat 27082798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30654584 - 30654543
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  30654584 aacaccctacaaagtgtaacacttaagactatcacataatat 30654543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 1953985 - 1953951
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatcacataa 39  Q
    |||||||||||||||||||||||||||||||||||    
T  1953985 ccccacaaagtgtaacacttaagactatcacataa 1953951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12876298 - 12876340
Alignment:
Q  1 aacaccccacaaagtgtaacactt-aagactatcacataatat 42  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  12876298 aacaccccacaaagtgtaacacttaaagactatcacataatat 12876340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7890958 - 7890917
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  7890958 aacaccccacaacgtgtaacacttaagattatcacataatat 7890917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11727213 - 11727254
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  11727213 aacaccccacaaaatgtaacacttaagactatcacatgatat 11727254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16223052 - 16223093
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  16223052 aacaccccaaaaagtgtaacacttaagagtatcacataatat 16223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41910989 - 41910948
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  41910989 aacaccccacaaagtgtaacacttaatactatcacatgatat 41910948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43025891 - 43025932
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  43025891 aacaccccacaaaatgtaacacttaaaactatcacataatat 43025932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 34463734 - 34463792
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactatt 106  Q
    ||||||||||||| ||||| ||| ||||   ||||||||||||||||| |||||||||||||    
T  34463734 caacgataaaataatacctataagtcca---tgttgcaagcattactaaatgaattactatt 34463792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5299947 - 5299914
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatca 34  Q
    |||||||||||||||||||||||||||| |||||    
T  5299947 aacaccccacaaagtgtaacacttaagattatca 5299914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8803818 - 8803777
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| | |||||||||||||||| |||||||||||||||    
T  8803818 aacaccctaaaaagtgtaacacttaatactatcacataatat 8803777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23854432 - 23854391
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| || ||||||||||||||||||| ||||||||||||    
T  23854432 aacaccgcataaagtgtaacacttaagacaatcacataatat 23854391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 44869690 - 44869719
Alignment:
Q  5 ccccacaaagtgtaacacttaagactatca 34  Q
    ||||||||||||||||||||||||||||||    
T  44869690 ccccacaaagtgtaacacttaagactatca 44869719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 102; Significance: 1e-50; HSPs: 6)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 408357 - 408228
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  408357 attccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 408258  T
Q  141 ataaaacattaagatcaaaattaacttttt 170  Q
    || ||||||||| || |||||||| |||||    
T  408257 atcaaacattaaaataaaaattaatttttt 408228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 94024 - 93899
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| |    
T  94024 caacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcactaatcaacaattt-aaaatgaatca 93926  T
Q  145 aacattaagatcaaaattaactttttt 171  Q
    |||||||| ||||||||||||||||||    
T  93925 aacattaaaatcaaaattaactttttt 93899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 413 - 514
Alignment:
Q  69 tccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttt 168  Q
    |||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  413 tccaagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttt 512  T
Q  169 tt 170  Q
    ||    
T  513 tt 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 324 - 365
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  324 aacaccccataaagtgtaacacttaagactatcacataatat 365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 94378 - 94337
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  94378 aacaccccacaaagtgtaacacttaagactattacataatat 94337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 408424 - 408383
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    |||||| ||||||||| ||||||||||||||||||| |||||    
T  408424 aacacctcacaaagtggaacacttaagactatcacacaatat 408383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 8144 - 8271
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 140  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8144 attccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 8243  T
Q  141 ataaaacattaagatcaaaattaacttt 168  Q
    || || | |||| |||||||||||||||    
T  8244 atcaatcgttaaaatcaaaattaacttt 8271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8077 - 8118
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8077 aacaccccacaaagtgtaacacttaagactatcacataatat 8118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 12169 - 12295
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||     
T  12169 ccaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaat-aatc 12267  T
Q  144 aaacattaagatcaaaattaactttttt 171  Q
    |||||||||||| |||||||||||||||    
T  12268 aaacattaagattaaaattaactttttt 12295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12099 - 12140
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||    
T  12099 aacaccccacaaagtgtcacacttaagactatcgcatgatat 12140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 44217 - 44342
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  44217 caacgataaaatagtacatgtaagtccaagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatta 44316  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| |||||||| ||||||||    
T  44317 aacattaaaatcaaaatcaacttttt 44342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44147 - 44187
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  44147 aacaccccacaaagtgtaacacttaag-ctatcacataatat 44187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 154570 - 154445
Alignment:
Q  45 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataa 144  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  154570 caacgataaaatagtacatgtaagtccaagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatta 154471  T
Q  145 aacattaagatcaaaattaacttttt 170  Q
    |||||||| |||||||| ||||||||    
T  154470 aacattaaaatcaaaatcaacttttt 154445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 154640 - 154600
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  154640 aacaccccacaaagtgtaacacttaag-ctatcacataatat 154600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 145944 - 145814
Alignment:
Q  41 attccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatg 139  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||||||| |||||| ||| |||||| ||||||||||||| || ||||||||||||    
T  145944 attccaacgataaaatagtgtctgtaagtccaagatgttgcaagcattactaaatgaatatacaattgatcattaatcagtaataaaaaatttaaaaatg 145845  T
Q  140 aataaaacattaagatcaaaattaacttttt 170  Q
    ||| ||||||||| |||||||||||||||||    
T  145844 aattaaacattaaaatcaaaattaacttttt 145814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 146011 - 145970
Alignment:
Q  1 aacaccccacaaagtgtaacacttaagactatcacataatat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  146011 aacaccctacaaagtgtaacacttaagactatcacataatat 145970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 267545 - 267662
Alignment:
Q  44 ccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaata 143  Q
    |||||||||||||| ||| ||||| ||||||||| |||||| ||||||||||||||||         |  |||||||||||||||||||||||||||||     
T  267545 ccaacgataaaataatacatgtaagtccaagatgctgcaagaattactagatgaatta---------accaatcagtaatcaacaatttaaaaatgaatc 267635  T
Q  144 aaacattaagatcaaaattaacttttt 170  Q
    ||| ||||||||||||||||| |||||    
T  267636 aaatattaagatcaaaattaatttttt 267662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 267474 - 267516
Alignment:
Q  1 aacaccccacaaagtgtaacactt-aagactatcacataatat 42  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  267474 aacatcccacaaagtgtaacacttaaagactatcacataatat 267516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 100994 - 101058
Alignment:
Q  63 tgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaa 129  Q
    ||||| |||||||||||||||||||||||| ||| |||||||  ||| |||||||||||||||||||    
T  100994 tgtaagtccaagatgttgcaagcattactaaatgcattacta--gatcattaatcagtaatcaacaa 101058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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