View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21600_high_4 (Length: 608)

Name: NF21600_high_4
Description: NF21600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21600_high_4
NF21600_high_4
[»] chr4 (55 HSPs)
chr4 (11-592)||(51160138-51160719)
chr4 (11-179)||(51149275-51149443)
chr4 (11-143)||(51202837-51202969)
chr4 (15-154)||(29933748-29933887)
chr4 (285-340)||(5630688-5630743)
chr4 (540-582)||(3475868-3475910)
chr4 (542-586)||(24088596-24088640)
chr4 (543-581)||(11012141-11012179)
chr4 (543-584)||(36123493-36123534)
chr4 (540-581)||(41609709-41609750)
chr4 (540-581)||(45521609-45521650)
chr4 (543-583)||(23220333-23220373)
chr4 (543-583)||(24772669-24772709)
chr4 (543-583)||(39010170-39010210)
chr4 (541-581)||(51359821-51359861)
chr4 (282-325)||(9960600-9960643)
chr4 (544-583)||(12387688-12387727)
chr4 (542-581)||(15638161-15638200)
chr4 (543-581)||(169535-169573)
chr4 (540-582)||(7037514-7037556)
chr4 (540-582)||(9032779-9032821)
chr4 (543-581)||(9162066-9162104)
chr4 (543-581)||(12074184-12074222)
chr4 (543-581)||(30973597-30973635)
chr4 (544-582)||(32365690-32365728)
chr4 (543-581)||(35661630-35661668)
chr4 (543-581)||(36444428-36444466)
chr4 (543-581)||(51296222-51296260)
chr4 (540-581)||(1796366-1796407)
chr4 (541-582)||(3078939-3078980)
chr4 (540-581)||(3222989-3223030)
chr4 (544-581)||(4511825-4511862)
chr4 (540-581)||(5208357-5208398)
chr4 (542-583)||(8810569-8810610)
chr4 (541-582)||(14443197-14443238)
chr4 (542-583)||(18568847-18568888)
chr4 (544-581)||(27384187-27384224)
chr4 (545-582)||(30042133-30042170)
chr4 (540-581)||(44368232-44368273)
chr4 (540-581)||(50831786-50831827)
chr4 (540-581)||(52669639-52669680)
chr4 (544-581)||(54036552-54036589)
chr4 (540-581)||(55268031-55268072)
chr4 (542-583)||(56215603-56215644)
chr4 (543-583)||(3968883-3968923)
chr4 (541-581)||(5249868-5249908)
chr4 (543-583)||(26885289-26885329)
chr4 (544-580)||(28676175-28676211)
chr4 (543-583)||(29384230-29384270)
chr4 (543-579)||(29525860-29525896)
chr4 (541-581)||(32696820-32696860)
chr4 (541-581)||(51255746-51255786)
chr4 (541-581)||(51377324-51377364)
chr4 (541-581)||(53463101-53463141)
chr4 (541-581)||(56557733-56557773)
[»] chr3 (43 HSPs)
chr3 (30-121)||(49733894-49733985)
chr3 (543-582)||(19418190-19418229)
chr3 (540-583)||(29525231-29525274)
chr3 (540-583)||(50280117-50280160)
chr3 (542-581)||(50652388-50652427)
chr3 (540-582)||(1402649-1402691)
chr3 (540-582)||(11327107-11327149)
chr3 (540-581)||(48405410-48405451)
chr3 (541-581)||(10811135-10811175)
chr3 (541-581)||(48287671-48287711)
chr3 (542-581)||(7246-7285)
chr3 (543-582)||(462434-462473)
chr3 (541-580)||(47101523-47101562)
chr3 (540-583)||(48944740-48944783)
chr3 (543-581)||(28300681-28300719)
chr3 (541-583)||(29573387-29573429)
chr3 (544-582)||(30580132-30580170)
chr3 (543-581)||(36869870-36869908)
chr3 (543-581)||(43169775-43169813)
chr3 (543-581)||(43333703-43333741)
chr3 (543-581)||(46315988-46316026)
chr3 (540-582)||(54233498-54233540)
chr3 (540-581)||(2280177-2280218)
chr3 (542-583)||(2482706-2482747)
chr3 (542-583)||(5393866-5393907)
chr3 (544-581)||(8254027-8254064)
chr3 (540-581)||(32931948-32931989)
chr3 (540-581)||(36818956-36818997)
chr3 (540-581)||(44910697-44910738)
chr3 (544-581)||(47683801-47683838)
chr3 (544-581)||(49196696-49196733)
chr3 (543-583)||(14957834-14957874)
chr3 (541-581)||(19150350-19150390)
chr3 (543-583)||(29373919-29373959)
chr3 (543-583)||(31017427-31017467)
chr3 (541-581)||(34021494-34021534)
chr3 (543-583)||(37134639-37134679)
chr3 (541-581)||(37894274-37894314)
chr3 (541-581)||(50559243-50559283)
chr3 (543-583)||(51464305-51464345)
chr3 (541-581)||(52454125-52454165)
chr3 (541-581)||(52963347-52963387)
chr3 (541-581)||(55399999-55400039)
[»] chr1 (47 HSPs)
chr1 (541-581)||(11947795-11947835)
chr1 (540-582)||(29362722-29362764)
chr1 (543-581)||(31184281-31184319)
chr1 (544-582)||(40139125-40139163)
chr1 (540-581)||(2854990-2855031)
chr1 (544-581)||(43612103-43612140)
chr1 (540-581)||(49645362-49645403)
chr1 (541-581)||(29706734-29706774)
chr1 (543-583)||(46947979-46948019)
chr1 (543-582)||(16836137-16836176)
chr1 (540-578)||(16234324-16234362)
chr1 (543-581)||(17167849-17167887)
chr1 (543-581)||(40238438-40238476)
chr1 (544-582)||(41507217-41507255)
chr1 (541-583)||(47820532-47820574)
chr1 (543-581)||(48678986-48679024)
chr1 (544-582)||(48872051-48872089)
chr1 (543-581)||(48872379-48872417)
chr1 (541-583)||(49931551-49931593)
chr1 (544-581)||(9011645-9011682)
chr1 (540-581)||(12999852-12999893)
chr1 (541-582)||(19947772-19947813)
chr1 (544-581)||(27687542-27687579)
chr1 (544-581)||(29264015-29264052)
chr1 (543-584)||(32821632-32821673)
chr1 (540-581)||(32873341-32873382)
chr1 (540-581)||(35196133-35196173)
chr1 (540-581)||(35972834-35972875)
chr1 (544-581)||(40596077-40596114)
chr1 (544-581)||(42256460-42256497)
chr1 (544-581)||(47386828-47386865)
chr1 (541-582)||(49020435-49020476)
chr1 (544-581)||(50797791-50797828)
chr1 (543-580)||(52714979-52715016)
chr1 (541-577)||(2492417-2492453)
chr1 (543-583)||(8464546-8464586)
chr1 (541-581)||(9566992-9567032)
chr1 (541-581)||(10890077-10890117)
chr1 (541-581)||(13489662-13489702)
chr1 (541-581)||(15705093-15705133)
chr1 (541-581)||(21433432-21433472)
chr1 (540-580)||(26839383-26839423)
chr1 (551-583)||(31847226-31847258)
chr1 (545-581)||(40612114-40612150)
chr1 (541-581)||(48983699-48983739)
chr1 (543-579)||(50035570-50035606)
chr1 (541-581)||(52362482-52362522)
[»] chr7 (39 HSPs)
chr7 (543-581)||(22692084-22692122)
chr7 (542-580)||(30818029-30818067)
chr7 (540-582)||(33050182-33050224)
chr7 (541-581)||(9363387-9363427)
chr7 (542-582)||(26153645-26153685)
chr7 (543-583)||(41080124-41080164)
chr7 (544-580)||(43171207-43171243)
chr7 (542-581)||(5068655-5068694)
chr7 (540-583)||(11789721-11789764)
chr7 (541-580)||(23910282-23910321)
chr7 (542-581)||(27070700-27070739)
chr7 (542-581)||(27207574-27207613)
chr7 (540-583)||(29162309-29162352)
chr7 (540-583)||(29763828-29763871)
chr7 (546-581)||(34992360-34992395)
chr7 (542-581)||(47530323-47530362)
chr7 (544-582)||(2347093-2347131)
chr7 (540-582)||(2600564-2600606)
chr7 (543-581)||(4971290-4971328)
chr7 (543-581)||(19426580-19426618)
chr7 (543-581)||(37392043-37392081)
chr7 (541-583)||(49069247-49069289)
chr7 (544-581)||(2323304-2323341)
chr7 (544-581)||(26041321-26041358)
chr7 (540-581)||(27164867-27164908)
chr7 (544-581)||(28862104-28862141)
chr7 (540-581)||(30864447-30864488)
chr7 (544-581)||(37856188-37856225)
chr7 (544-581)||(43444635-43444672)
chr7 (540-581)||(44511139-44511180)
chr7 (541-581)||(12007217-12007257)
chr7 (544-584)||(26041456-26041496)
chr7 (543-583)||(28109955-28109995)
chr7 (541-581)||(31398124-31398163)
chr7 (540-580)||(37325849-37325889)
chr7 (541-581)||(41893915-41893955)
chr7 (541-581)||(47448826-47448866)
chr7 (545-581)||(47684174-47684210)
chr7 (544-580)||(49025337-49025373)
[»] chr2 (42 HSPs)
chr2 (543-581)||(3299138-3299176)
chr2 (540-581)||(36383462-36383503)
chr2 (542-582)||(15123968-15124008)
chr2 (543-583)||(30974022-30974062)
chr2 (541-581)||(38821366-38821406)
chr2 (541-581)||(44050015-44050055)
chr2 (542-581)||(14954631-14954670)
chr2 (542-581)||(29168725-29168764)
chr2 (540-583)||(30487499-30487542)
chr2 (304-339)||(31417103-31417138)
chr2 (540-583)||(35334518-35334561)
chr2 (542-581)||(36909875-36909914)
chr2 (540-586)||(5852469-5852515)
chr2 (543-581)||(6666020-6666058)
chr2 (541-583)||(6999099-6999141)
chr2 (543-581)||(7498024-7498062)
chr2 (543-581)||(10687941-10687979)
chr2 (540-578)||(12877460-12877498)
chr2 (547-581)||(18373847-18373881)
chr2 (542-584)||(22303200-22303242)
chr2 (540-578)||(43791832-43791870)
chr2 (543-581)||(44189827-44189865)
chr2 (541-583)||(45376252-45376294)
chr2 (540-581)||(3196117-3196158)
chr2 (543-580)||(8087372-8087409)
chr2 (544-581)||(8482255-8482292)
chr2 (548-581)||(10749717-10749750)
chr2 (541-582)||(14255301-14255342)
chr2 (540-581)||(18508078-18508119)
chr2 (544-581)||(22353198-22353235)
chr2 (544-581)||(25086335-25086372)
chr2 (542-583)||(25507253-25507294)
chr2 (540-581)||(27307261-27307302)
chr2 (544-581)||(29795447-29795484)
chr2 (542-583)||(40874293-40874334)
chr2 (541-581)||(6336252-6336292)
chr2 (541-581)||(13765400-13765440)
chr2 (543-583)||(28165127-28165167)
chr2 (542-582)||(30416359-30416399)
chr2 (549-581)||(37601226-37601258)
chr2 (541-581)||(40504224-40504264)
chr2 (542-582)||(43621980-43622020)
[»] chr8 (38 HSPs)
chr8 (544-581)||(11789810-11789847)
chr8 (540-581)||(41273515-41273556)
chr8 (544-583)||(13884194-13884233)
chr8 (543-582)||(26871045-26871084)
chr8 (542-581)||(36064030-36064069)
chr8 (543-582)||(38844823-38844862)
chr8 (547-581)||(6161948-6161982)
chr8 (546-584)||(9334263-9334301)
chr8 (540-582)||(14531620-14531662)
chr8 (541-583)||(25830277-25830319)
chr8 (543-581)||(37568647-37568685)
chr8 (541-582)||(5601018-5601059)
chr8 (541-582)||(5639561-5639602)
chr8 (540-581)||(5771906-5771947)
chr8 (540-581)||(5772002-5772043)
chr8 (543-580)||(6806909-6806946)
chr8 (544-581)||(8410378-8410415)
chr8 (540-581)||(9314411-9314452)
chr8 (540-581)||(12655922-12655963)
chr8 (542-583)||(12707147-12707188)
chr8 (544-581)||(16487610-16487647)
chr8 (540-581)||(20288533-20288574)
chr8 (540-581)||(21075162-21075203)
chr8 (545-582)||(21273745-21273782)
chr8 (541-582)||(26026895-26026936)
chr8 (544-581)||(37392151-37392188)
chr8 (540-581)||(40380281-40380322)
chr8 (541-581)||(67192-67232)
chr8 (540-580)||(3207441-3207481)
chr8 (541-581)||(4658294-4658334)
chr8 (541-581)||(7598708-7598748)
chr8 (541-581)||(10644833-10644873)
chr8 (543-583)||(20473777-20473817)
chr8 (543-583)||(22767130-22767170)
chr8 (541-581)||(33100500-33100540)
chr8 (542-582)||(34018807-34018847)
chr8 (542-582)||(35937544-35937584)
chr8 (543-583)||(43290898-43290938)
[»] chr6 (21 HSPs)
chr6 (540-581)||(3339529-3339570)
chr6 (543-581)||(15666806-15666844)
chr6 (543-581)||(15722536-15722574)
chr6 (543-581)||(19789109-19789147)
chr6 (548-582)||(21857605-21857639)
chr6 (543-581)||(32729889-32729927)
chr6 (544-581)||(1897697-1897734)
chr6 (540-581)||(2056783-2056824)
chr6 (544-581)||(3180026-3180063)
chr6 (541-582)||(11635566-11635607)
chr6 (544-581)||(16328724-16328761)
chr6 (540-581)||(17551409-17551450)
chr6 (540-581)||(27334858-27334899)
chr6 (540-581)||(27395598-27395639)
chr6 (544-581)||(31417330-31417367)
chr6 (540-581)||(31883334-31883375)
chr6 (543-580)||(32621802-32621839)
chr6 (541-581)||(8505805-8505845)
chr6 (541-581)||(20822899-20822939)
chr6 (541-581)||(25127864-25127904)
chr6 (541-581)||(32459548-32459588)
[»] chr5 (44 HSPs)
chr5 (542-583)||(27440477-27440518)
chr5 (543-583)||(31708368-31708408)
chr5 (542-581)||(2629818-2629857)
chr5 (540-583)||(3263538-3263581)
chr5 (540-583)||(9599758-9599801)
chr5 (542-581)||(14914372-14914411)
chr5 (543-582)||(17063864-17063903)
chr5 (543-582)||(42699056-42699095)
chr5 (541-583)||(3109618-3109660)
chr5 (540-582)||(4820154-4820196)
chr5 (543-581)||(7144577-7144615)
chr5 (547-581)||(8897382-8897416)
chr5 (544-578)||(9065434-9065468)
chr5 (544-582)||(16143389-16143427)
chr5 (540-582)||(30574407-30574449)
chr5 (541-582)||(4719649-4719690)
chr5 (541-582)||(6517711-6517752)
chr5 (542-583)||(8728613-8728654)
chr5 (540-581)||(9594478-9594519)
chr5 (544-581)||(13734383-13734420)
chr5 (544-581)||(14206400-14206437)
chr5 (541-582)||(21155986-21156027)
chr5 (541-582)||(22098254-22098295)
chr5 (540-581)||(28501592-28501633)
chr5 (540-581)||(29765830-29765871)
chr5 (543-580)||(34400619-34400656)
chr5 (542-583)||(39788738-39788779)
chr5 (542-583)||(41621960-41622001)
chr5 (541-581)||(1293117-1293157)
chr5 (541-581)||(4088443-4088483)
chr5 (543-583)||(6420670-6420710)
chr5 (542-582)||(9933499-9933539)
chr5 (541-581)||(10865317-10865357)
chr5 (541-581)||(11148511-11148551)
chr5 (543-583)||(12718413-12718453)
chr5 (543-583)||(12779639-12779679)
chr5 (541-581)||(13089813-13089853)
chr5 (543-583)||(15639383-15639423)
chr5 (541-581)||(18695318-18695358)
chr5 (543-583)||(19983839-19983879)
chr5 (541-581)||(21012568-21012608)
chr5 (541-581)||(27546063-27546103)
chr5 (543-583)||(34381010-34381050)
chr5 (543-583)||(41460114-41460154)
[»] scaffold0020 (1 HSPs)
scaffold0020 (543-583)||(155904-155944)
[»] scaffold0003 (1 HSPs)
scaffold0003 (542-581)||(337118-337157)
[»] scaffold0002 (1 HSPs)
scaffold0002 (543-582)||(6426-6465)
[»] scaffold0154 (1 HSPs)
scaffold0154 (543-581)||(4315-4353)
[»] scaffold0024 (1 HSPs)
scaffold0024 (543-581)||(60469-60507)
[»] scaffold0054 (1 HSPs)
scaffold0054 (544-581)||(31623-31660)
[»] scaffold0252 (1 HSPs)
scaffold0252 (542-578)||(8007-8043)
[»] scaffold0027 (1 HSPs)
scaffold0027 (543-579)||(133998-134034)


Alignment Details
Target: chr4 (Bit Score: 566; Significance: 0; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 566; E-Value: 0
Query Start/End: Original strand, 11 - 592
Target Start/End: Original strand, 51160138 - 51160719
Alignment:
Q  11 caaaggtgcagatttaatagcagtagttaagaatggtgtgatagcagagaaaggaaaacatgaagcgttgctccataagggcggtgactatgcttcttta 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51160138 caaaggtgcagatttaatagcagtagttaagaatggtgtgatagcagagaaaggaaaacatgaagcgttgctccataagggcggtgactatgcttcttta 51160237  T
Q  111 gtagcactgcataaaagtgcttctacatcttagatccctttcgcatcaatagttgttgtaaaataagatgcttggacactttagtccctatcaaggtttc 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51160238 gtagcactgcataaaagtgcttctacatcttagatccctttcgcatcaatagttgttgtaaaataagatgcttggacactttagtccctatcaaggtttc 51160337  T
Q  211 attttatttgtgtgtgtaggaatgtgaacatgatgagttgagttatgagtatgtgagttgctccaatcattccctttctctcaagcctagattattttca 310  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51160338 attttatttgtgtgtgtaggattgtgaacatgatgagttgagttatgagtatgtgagttgctccaatcattccctttctctcaagcctcgattattttca 51160437  T
Q  311 ctctaggattcaatagagaaagcttgaatcatttttgtaatagaataaactgtttacataattgtcctatttaaagggttcaattgcaccgactaattga 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51160438 ctctaggattcaatagagaaagcttgaatcatttttgtaatagaataaactgtttacataattgtcctatttaaagggttcaattgcaccgactaattga 51160537  T
Q  411 gtaactaactcctaagaaattattaactaattcctaaatactaacagaattgatatagtgtaacctaaacaaaactagctaggcatatggcacacgaaga 510  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  51160538 gtaactaactcctaagaaattattaactaattcctaaatacgaacagaattgatatagtgtaacctaaacaaaattagctaggcatatggcacacgaaga 51160637  T
Q  511 tcaaagcaacaaagagataaagtgaaaactacaaaagttgtcataaaatgtttgtacaaatatcatttctcaagcttgtatt 592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51160638 tcaaagcaacaaagagataaagtgaaaactacaaaagttgtcataaaatgtttgtacaaatatcatttctcaagcttgtatt 51160719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 51149275 - 51149443
Alignment:
Q  11 caaaggtgcagatttaatagcagtagttaagaatggtgtgatagcagagaaaggaaaacatgaagcgttgctccataagggcggtgactatgcttcttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  51149275 caaaggtgcagatttaatagcagtagttaagaatggtgtgatagcagagaaaggaaaacatgaagcattgctccataagggtggtgactatgcttcttta 51149374  T
Q  111 gtagcactgcataaaagtgcttctacatcttagatccctttcgcatcaatagttgttgtaaaataagat 179  Q
    |||||| | |||| ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  51149375 gtagcattacatacaagtgattctacatcttagatccctttggcatcaattgttgttgtaaaataagat 51149443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 51202837 - 51202969
Alignment:
Q  11 caaaggtgcagatttaatagcagtagttaagaatggtgtgatagcagagaaaggaaaacatgaagcgttgctccataagggcggtgactatgcttcttta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  51202837 caaaggtgcagatttaatagcagtagttaagaatggtgtgatagcagagaaaggaaaacatgaagcattgctccataagggtggtgactatgcttcttta 51202936  T
Q  111 gtagcactgcataaaagtgcttctacatcttag 143  Q
    |||||| | || | |||||||||||||||||||    
T  51202937 gtagcattacacacaagtgcttctacatcttag 51202969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 29933887 - 29933748
Alignment:
Q  15 ggtgcagatttaatagcagtagttaagaatggtgtgatagcagagaaaggaaaacatgaagcgttgctccataagggcggtgactatgcttctttagtag 114  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||| ||    
T  29933887 ggtgcagatttaattgcagtcgttaagaatggtgtgatatcagagaaaggaaaacatgaggcattgctacataagggtggtgactatgcttctttagcag 29933788  T
Q  115 cactgcataaaagtgcttctacatcttagatccctttcgc 154  Q
    || | || | ||||||||||||||||||||||| ||||||    
T  29933787 cattacacacaagtgcttctacatcttagatccttttcgc 29933748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 5630743 - 5630688
Alignment:
Q  285 tttctctcaagcctagattattttcactctaggattcaatagagaaagcttgaatc 340  Q
    |||||||||| |||  || |||||||||||||||||||||||||||||||||||||    
T  5630743 tttctctcaaccctcaatgattttcactctaggattcaatagagaaagcttgaatc 5630688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 3475910 - 3475868
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  3475910 tacaaaagttgtcataaaatggttgtacaaatatcatttctca 3475868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 586
Target Start/End: Original strand, 24088596 - 24088640
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaagct 586  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  24088596 caaaagttgtcataaaatggttgtacaaatatcatttctctagct 24088640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 11012179 - 11012141
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11012179 aaaagttgtcataaaatggttgtacaaatatcatttctc 11012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 584
Target Start/End: Original strand, 36123493 - 36123534
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaag 584  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  36123493 aaaagttgttataaaatgattgtacaaatatcatttctcaag 36123534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 41609709 - 41609750
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  41609709 tacaaaagttgtcataaaatggatgtacaaatatcatttctc 41609750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 45521609 - 45521650
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  45521609 tacaaaagttgtcataaaatggatgtacaaatatcatttctc 45521650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 23220373 - 23220333
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  23220373 aaaagttgtcaaaaaatggttgtacaaatatcatttctcaa 23220333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 24772709 - 24772669
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  24772709 aaaagttgtcataaaatggatgtacaaatatcatttctcaa 24772669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 39010170 - 39010210
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  39010170 aaaagttgtcacaaaatggttgtacaaatatcatttctcaa 39010210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 51359821 - 51359861
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  51359821 acaaaagttgtcacaaaatggttgtacaaatatcatttctc 51359861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 325
Target Start/End: Original strand, 9960600 - 9960643
Alignment:
Q  282 ccctttctctcaagcctagattattttcactctaggattcaata 325  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||    
T  9960600 ccctttctctcaacccttgattattttcaccctaggattcaata 9960643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 544 - 583
Target Start/End: Original strand, 12387688 - 12387727
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  12387688 aaagttgtcaaaaaatgattgtacaaatatcatttctcaa 12387727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Complemental strand, 15638200 - 15638161
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  15638200 caaaagttgtcaaaaaatgattgtacaaatatcatttctc 15638161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 169535 - 169573
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  169535 aaaagttgtcacaaaatggttgtacaaatatcatttctc 169573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 582
Target Start/End: Original strand, 7037514 - 7037556
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||||| ||| || |||||||||||||||||||||    
T  7037514 tacaaaagttgtcacaaattggttgtacaaatatcatttctca 7037556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 9032821 - 9032779
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||||| ||| || |||||||||||||||||||||    
T  9032821 tacaaaagttgtcacaaattgattgtacaaatatcatttctca 9032779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 9162104 - 9162066
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  9162104 aaaagttgtcacaaaatgattgtacaaatatcatttctc 9162066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 12074184 - 12074222
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  12074184 aaaaattgtcataaaatggttgtacaaatatcatttctc 12074222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 30973635 - 30973597
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  30973635 aaaagttgtcataaagtggttgtacaaatatcatttctc 30973597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 32365690 - 32365728
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  32365690 aaagttgtcacaaaatggttgtacaaatatcatttctca 32365728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 35661630 - 35661668
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  35661630 aaaaattgtcataaaatggttgtacaaatatcatttctc 35661668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 36444428 - 36444466
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  36444428 aaaagttatcataaaatggttgtacaaatatcatttctc 36444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 51296222 - 51296260
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  51296222 aaaagttgtcataaagtgattgtacaaatatcatttctc 51296260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 1796407 - 1796366
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  1796407 tacaaaagttgtcacaaattggttgtacaaatatcatttctc 1796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Original strand, 3078939 - 3078980
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||| | |||||| |||||||||||||||||||||    
T  3078939 acaaaagttgttacaaaatgattgtacaaatatcatttctca 3078980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 3223030 - 3222989
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  3223030 tacaaaagttgtcacaaattgattgtacaaatatcatttctc 3222989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 4511862 - 4511825
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||| || |||||||||||||||||    
T  4511862 aaagttgtcataaaatggttatacaaatatcatttctc 4511825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 5208357 - 5208398
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  5208357 tacaaaagttgtcacaaattggttgtacaaatatcatttctc 5208398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Complemental strand, 8810610 - 8810569
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||| | |||||| ||||||||||||||||||||||    
T  8810610 caaaagttgtaagaaaatggttgtacaaatatcatttctcaa 8810569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 14443238 - 14443197
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||| |||||| |||| ||||||||||||||||    
T  14443238 acaaaagttgtcaaaaaatgattgttcaaatatcatttctca 14443197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 18568847 - 18568888
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||| |||||| ||||| ||||||||||||||||    
T  18568847 caaaagttgtcacaaaatggttgtataaatatcatttctcaa 18568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 27384224 - 27384187
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  27384224 aaagttgtaataaaatggttgtacaaatatcatttctc 27384187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 582
Target Start/End: Complemental strand, 30042170 - 30042133
Alignment:
Q  545 aagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  30042170 aagttgtcacaaaatggttgtacaaatatcatttctca 30042133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 44368232 - 44368273
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  44368232 tacaaaagttgtcacaaattgattgtacaaatatcatttctc 44368273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 50831786 - 50831827
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  50831786 tacaaaagttgtcaaaaagtggttgtacaaatatcatttctc 50831827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 52669639 - 52669680
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| ||| ||| |||||||||||||||||||||||    
T  52669639 tacaaaagttatcacaaattgtttgtacaaatatcatttctc 52669680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 54036552 - 54036589
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  54036552 aaagttgtcacaaaatggttgtacaaatatcatttctc 54036589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 55268031 - 55268072
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  55268031 tacaaaagttgtcacaaattggttgtacaaatatcatttctc 55268072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Complemental strand, 56215644 - 56215603
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||| ||| || ||||||||||||||||||||||    
T  56215644 caaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 56215603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 3968923 - 3968883
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||| | |||||| ||||||||||||||||||||||    
T  3968923 aaaagttgttagaaaatggttgtacaaatatcatttctcaa 3968883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 5249908 - 5249868
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||| |||||||||||||| ||| ||||||||||||||||    
T  5249908 acaaatgttgtcataaaatggttgcacaaatatcatttctc 5249868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 26885329 - 26885289
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  26885329 aaaagttgtcacaaagtggttgtacaaatatcatttctcaa 26885289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 28676175 - 28676211
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    |||||||||| |||||| |||||||||||||||||||    
T  28676175 aaagttgtcacaaaatggttgtacaaatatcatttct 28676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 29384230 - 29384270
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  29384230 aaaaattgtcataaagtgattgtacaaatatcatttctcaa 29384270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 579
Target Start/End: Complemental strand, 29525896 - 29525860
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttc 579  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  29525896 aaaagttgtaataaaatggttgtacaaatatcatttc 29525860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 32696820 - 32696860
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  32696820 acaaaagttgttagaaaatggttgtacaaatatcatttctc 32696860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 51255786 - 51255746
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  51255786 acaaaagttgtcaaaaaatggttgttcaaatatcatttctc 51255746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 51377324 - 51377364
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  51377324 acaaaagttgtcacaaattggttgtacaaatatcatttctc 51377364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 53463101 - 53463141
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||| |||| |||||||| ||||||||||||||||||||    
T  53463101 acaaaaattgttataaaatggttgtacaaatatcatttctc 53463141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 56557773 - 56557733
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||||  |||| |||||||||||||||    
T  56557773 acaaaagttgtcataaaattgttgttcaaatatcatttctc 56557733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 49733985 - 49733894
Alignment:
Q  30 gcagtagttaagaatggtgtgatagcagagaaaggaaaacatgaagcgttgctccataagggcggtgactatgcttctttagtagcactgca 121  Q
    ||||| ||||| ||||| ||||| | |||||||||||| |||||| |||||||| | ||| | |||  ||||||||||||||||||||||||    
T  49733985 gcagtggttaaaaatggagtgattgaagagaaaggaaagcatgaaacgttgctcaacaagagtggtacctatgcttctttagtagcactgca 49733894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 19418190 - 19418229
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  19418190 aaaagttgtcataaaatggttgtacaaatatcatttctca 19418229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 583
Target Start/End: Complemental strand, 29525274 - 29525231
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  29525274 tacaaaagttgtcataaaatgaatgtacaaatatcatttctcaa 29525231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 583
Target Start/End: Original strand, 50280117 - 50280160
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  50280117 tacaaaagttgtcatagaatggttgtacaaatatcatttctcaa 50280160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 581
Target Start/End: Complemental strand, 50652427 - 50652388
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  50652427 caaaagttgtcataaaatggttgtacaaatatcatttctc 50652388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 1402691 - 1402649
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  1402691 tacaaaagttgtcataaaatggatgtacaaatatcatttctca 1402649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 11327149 - 11327107
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  11327149 tacaaaagttgtcacaaaatggttgtacaaatatcatttctca 11327107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 48405451 - 48405410
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  48405451 tacaaaagttgtcacaaaatggttgtacaaatatcatttctc 48405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 10811175 - 10811135
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  10811175 acaaaagttgtcataaaatggttgttcaaatatcatttctc 10811135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 48287711 - 48287671
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  48287711 acaaaagttgttataaaatggttgtacaaatatcatttctc 48287671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 7246 - 7285
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  7246 caaaagttgtcagaaaatgattgtacaaatatcatttctc 7285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 462434 - 462473
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  462434 aaaagttgtcacaaaatggttgtacaaatatcatttctca 462473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 541 - 580
Target Start/End: Complemental strand, 47101562 - 47101523
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  47101562 acaaaagttgtcacaaaatggttgtacaaatatcatttct 47101523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 583
Target Start/End: Original strand, 48944740 - 48944783
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||| | |||||| ||||||||||||||||||||||    
T  48944740 tacaaaagttgttagaaaatggttgtacaaatatcatttctcaa 48944783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 28300681 - 28300719
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  28300681 aaaagttgtcataaagtggttgtacaaatatcatttctc 28300719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 583
Target Start/End: Original strand, 29573387 - 29573429
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| | |||||| ||||||||||||||||||||||    
T  29573387 acaaaagttgttacaaaatggttgtacaaatatcatttctcaa 29573429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 30580170 - 30580132
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  30580170 aaagttgtcataaaatggttgtataaatatcatttctca 30580132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 36869870 - 36869908
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  36869870 aaaagttgtcaaaaaatggttgtacaaatatcatttctc 36869908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 43169775 - 43169813
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  43169775 aaaagttgtcacaaaatggttgtacaaatatcatttctc 43169813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 43333703 - 43333741
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  43333703 aaaagttgtcataaaatgactgtacaaatatcatttctc 43333741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 46315988 - 46316026
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  46315988 aaaagttgtcataaagtggttgtacaaatatcatttctc 46316026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 582
Target Start/End: Original strand, 54233498 - 54233540
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||| | |||||| |||||||||||||||||||||    
T  54233498 tacaaaagttgtaaaaaaatggttgtacaaatatcatttctca 54233540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 2280218 - 2280177
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||  ||||||| ||||||||||||||||||||    
T  2280218 tacaaaagttgtactaaaatggttgtacaaatatcatttctc 2280177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 2482706 - 2482747
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  2482706 caaaagttgtcacaaaatggatgtacaaatatcatttctcaa 2482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 5393866 - 5393907
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||| | |||||| ||||||||||||||||||||||    
T  5393866 caaaagttgtaagaaaatgattgtacaaatatcatttctcaa 5393907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 8254064 - 8254027
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  8254064 aaagttgtcacaaaatggttgtacaaatatcatttctc 8254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 32931948 - 32931989
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  32931948 tacaaaagttgtcacaaattggttgtacaaatatcatttctc 32931989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 36818997 - 36818956
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  36818997 tacaaaagttgtcacaaattggttgtacaaatatcatttctc 36818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 44910738 - 44910697
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| ||||||||||  |||||||||||||||||||    
T  44910738 tacaaaagttatcataaaatgaatgtacaaatatcatttctc 44910697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 47683838 - 47683801
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  47683838 aaagttgtcacaaaatggttgtacaaatatcatttctc 47683801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 49196733 - 49196696
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  49196733 aaagttgtcacaaaatggttgtacaaatatcatttctc 49196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 14957874 - 14957834
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  14957874 aaaagttgtcacaaagtggttgtacaaatatcatttctcaa 14957834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 19150350 - 19150390
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  19150350 acaaaagttgttaaaaaatgattgtacaaatatcatttctc 19150390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 29373959 - 29373919
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||| ||||||||||||| ||||||||||||||||| ||||    
T  29373959 aaaaattgtcataaaatgattgtacaaatatcatttatcaa 29373919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 31017427 - 31017467
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||| | |||||| ||||||||||||||||||||||    
T  31017427 aaaagttgttagaaaatgattgtacaaatatcatttctcaa 31017467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 34021494 - 34021534
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  34021494 acaaaagttgtcacaaattgattgtacaaatatcatttctc 34021534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 37134639 - 37134679
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||| ||||||||||||  ||||||||||||||||||||||    
T  37134639 aaaaattgtcataaaatagttgtacaaatatcatttctcaa 37134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 37894274 - 37894314
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  37894274 acaaaagttgttagaaaatggttgtacaaatatcatttctc 37894314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 50559243 - 50559283
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| |||||  ||||||||||||||||||||    
T  50559243 acaaaagttgtcaaaaaatagttgtacaaatatcatttctc 50559283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 51464305 - 51464345
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  51464305 aaaagttgtcacaaagtggttgtacaaatatcatttctcaa 51464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 52454125 - 52454165
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  52454125 acaaaagttgtcacaaattgattgtacaaatatcatttctc 52454165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 52963347 - 52963387
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  52963347 acaaaagttgttaaaaaatggttgtacaaatatcatttctc 52963387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 55400039 - 55399999
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  55400039 acaaaagttgtcataaaatggatgttcaaatatcatttctc 55399999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 11947835 - 11947795
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  11947835 acaaaagttgtcataaaatggttgtacaaatatcatttctc 11947795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 582
Target Start/End: Original strand, 29362722 - 29362764
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  29362722 tacaaaagttgtcataaattgattgtacaaatatcatttctca 29362764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 31184319 - 31184281
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  31184319 aaaagttgtcataaaatggttgtacaaatatcatttctc 31184281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 40139163 - 40139125
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  40139163 aaagttgtcataaaatggttgtacaaatatcatttctca 40139125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 2854990 - 2855031
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  2854990 tacaaaagttgtcataaaatgaatgtacaaatatcatttctc 2855031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 43612103 - 43612140
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43612103 aaagttgtcataaaatggttgtacaaatatcatttctc 43612140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 49645403 - 49645362
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  49645403 tacaaaagttgtcataaaatgattatacaaatatcatttctc 49645362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 29706734 - 29706774
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  29706734 acaaaagttatcataaaatggttgtacaaatatcatttctc 29706774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 46948019 - 46947979
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  46948019 aaaagttgtcataaaatggatgtacaaatatcatttctcaa 46947979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 16836137 - 16836176
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  16836137 aaaagttgtcacaaaatgattgtacaaatatcatttctca 16836176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 578
Target Start/End: Original strand, 16234324 - 16234362
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcattt 578  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  16234324 tacaaaagttgtcataaaatggatgtacaaatatcattt 16234362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 17167887 - 17167849
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  17167887 aaaagttgtcataaaatggatgtacaaatatcatttctc 17167849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 40238476 - 40238438
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  40238476 aaaagttgtcaaaaaatgattgtacaaatatcatttctc 40238438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 41507217 - 41507255
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  41507217 aaagttgtcacaaaatggttgtacaaatatcatttctca 41507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 583
Target Start/End: Original strand, 47820532 - 47820574
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||||||||||||  ||| |||||||||||||||||    
T  47820532 acaaaagttgtcataaaatggatgttcaaatatcatttctcaa 47820574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 48678986 - 48679024
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  48678986 aaaaattgtcataaaatgattgtacaaatatcatttctc 48679024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 48872051 - 48872089
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  48872051 aaagttgtcaaaaaatggttgtacaaatatcatttctca 48872089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 48872417 - 48872379
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  48872417 aaaagttgtcataaagtggttgtacaaatatcatttctc 48872379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 583
Target Start/End: Complemental strand, 49931593 - 49931551
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| | |||||| ||||||||||||||||||||||    
T  49931593 acaaaagttgttaaaaaatgattgtacaaatatcatttctcaa 49931551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 9011682 - 9011645
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  9011682 aaagttgtcacaaaatggttgtacaaatatcatttctc 9011645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 12999852 - 12999893
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| | |||||| ||||||||||||||||||||    
T  12999852 tacaaaagttgttagaaaatggttgtacaaatatcatttctc 12999893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Original strand, 19947772 - 19947813
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||| |||||| |||| ||||||||||||||||    
T  19947772 acaaaagttgtcaaaaaatggttgttcaaatatcatttctca 19947813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 27687542 - 27687579
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  27687542 aaagttgtcacaaaatggttgtacaaatatcatttctc 27687579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 29264052 - 29264015
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| || ||||||||||||||||||||    
T  29264052 aaagttgtcataaagtggttgtacaaatatcatttctc 29264015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 584
Target Start/End: Complemental strand, 32821673 - 32821632
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaag 584  Q
    ||||||||||| ||| || |||||||||||||||||||||||    
T  32821673 aaaagttgtcacaaagtggttgtacaaatatcatttctcaag 32821632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 32873382 - 32873341
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| ||||||||||  |||||||||||||||||||    
T  32873382 tacaaaagttatcataaaatggatgtacaaatatcatttctc 32873341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 35196173 - 35196133
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  35196173 tacaaaagttgtcataaaatg-ttgtacaagtatcatttctc 35196133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 35972834 - 35972875
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| |||||| ||| ||||||||||||||||    
T  35972834 tacaaaagttgtcacaaaatggttgaacaaatatcatttctc 35972875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 40596077 - 40596114
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  40596077 aaagttgtcacaaaatggttgtacaaatatcatttctc 40596114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 42256497 - 42256460
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  42256497 aaagttgtcacaaaatggttgtacaaatatcatttctc 42256460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 47386828 - 47386865
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  47386828 aaagttgttataaaatggttgtacaaatatcatttctc 47386865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Original strand, 49020435 - 49020476
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||| | |||||| |||||||||||||||||||||    
T  49020435 acaaaagttgttaaaaaatggttgtacaaatatcatttctca 49020476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 50797828 - 50797791
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  50797828 aaagttgtcacaaaatgattgtacaaatatcatttctc 50797791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 580
Target Start/End: Complemental strand, 52715016 - 52714979
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  52715016 aaaagttgtcacaaaatgattgtacaaatatcatttct 52714979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 577
Target Start/End: Complemental strand, 2492453 - 2492417
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatt 577  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  2492453 acaaaagttgtaataaaatggttgtacaaatatcatt 2492417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 8464546 - 8464586
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||| ||||| || ||||||||||||||||||||||    
T  8464546 aaaagttgtaataaagtggttgtacaaatatcatttctcaa 8464586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 9566992 - 9567032
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  9566992 acaaaagttgtcaaaaaatggttgttcaaatatcatttctc 9567032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 10890077 - 10890117
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  10890077 acaaaagttgtcataaaatggatgttcaaatatcatttctc 10890117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 13489702 - 13489662
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  13489702 acaaaagttgtcataaaatggatgttcaaatatcatttctc 13489662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 15705093 - 15705133
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  15705093 acaaaagttgtcataaaatggatgttcaaatatcatttctc 15705133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 21433432 - 21433472
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  21433432 acaaaagttgttacaaaatggttgtacaaatatcatttctc 21433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 540 - 580
Target Start/End: Complemental strand, 26839423 - 26839383
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    |||||||||| |||||||||| ||||||||||| |||||||    
T  26839423 tacaaaagttatcataaaatggttgtacaaataccatttct 26839383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 583
Target Start/End: Original strand, 31847226 - 31847258
Alignment:
Q  551 tcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||| ||||||||||||||||||||||    
T  31847226 tcataaaatggttgtacaaatatcatttctcaa 31847258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 545 - 581
Target Start/End: Complemental strand, 40612150 - 40612114
Alignment:
Q  545 aagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  40612150 aagttgtcacaaaatggttgtacaaatatcatttctc 40612114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 48983699 - 48983739
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  48983699 acaaaagttgtcaaaaaatggttgttcaaatatcatttctc 48983739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 579
Target Start/End: Original strand, 50035570 - 50035606
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttc 579  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  50035570 aaaagttgtcacaaaatggttgtacaaatatcatttc 50035606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 52362522 - 52362482
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  52362522 acaaaagttgtcataaaatggatgttcaaatatcatttctc 52362482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 22692122 - 22692084
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  22692122 aaaagttgtcataaaatggttgtacaaatatcatttctc 22692084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 580
Target Start/End: Original strand, 30818029 - 30818067
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  30818029 caaaagttgtcataaaatggttgtacaaatatcatttct 30818067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 33050224 - 33050182
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  33050224 tacaaaagttgtcacaaaatggttgtacaaatatcatttctca 33050182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 9363427 - 9363387
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  9363427 acaaaagttgttataaaatgattgtacaaatatcatttctc 9363387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 26153685 - 26153645
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  26153685 caaaagttgtcataaaatagttgtacaaatatcatttctca 26153645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 41080164 - 41080124
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  41080164 aaaagttgtcacaaaatgattgtacaaatatcatttctcaa 41080124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 43171207 - 43171243
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    ||||||||||||||||| |||||||||||||||||||    
T  43171207 aaagttgtcataaaatggttgtacaaatatcatttct 43171243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 5068655 - 5068694
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  5068655 caaaagttatcataaaatggttgtacaaatatcatttctc 5068694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 583
Target Start/End: Original strand, 11789721 - 11789764
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||    
T  11789721 tacaaaagttgtactaaaatggttgtacaaatatcatttctcaa 11789764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 541 - 580
Target Start/End: Original strand, 23910282 - 23910321
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  23910282 acaaaagttgtcaaaaaatggttgtacaaatatcatttct 23910321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 27070700 - 27070739
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  27070700 caaaagttgtaataaaatgattgtacaaatatcatttctc 27070739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Complemental strand, 27207613 - 27207574
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  27207613 caaaagttgtaataaaatgattgtacaaatatcatttctc 27207574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 583
Target Start/End: Original strand, 29162309 - 29162352
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||||| ||| || ||||||||||||||||||||||    
T  29162309 tacaaaagttgtcacaaattgattgtacaaatatcatttctcaa 29162352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 583
Target Start/End: Complemental strand, 29763871 - 29763828
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||    
T  29763871 tacaaaagttatcacaaaatggttgtacaaatatcatttctcaa 29763828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 581
Target Start/End: Original strand, 34992360 - 34992395
Alignment:
Q  546 agttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||| ||||||||||||||||||||    
T  34992360 agttgtcataaaatggttgtacaaatatcatttctc 34992395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 47530323 - 47530362
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  47530323 caaaagttgtcataaaatggttgtataaatatcatttctc 47530362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 2347093 - 2347131
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  2347093 aaagttgtcacaaaatggttgtacaaatatcatttctca 2347131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 582
Target Start/End: Original strand, 2600564 - 2600606
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||  ||||||| |||||||||||||||||||||    
T  2600564 tacaaaagttgtactaaaatggttgtacaaatatcatttctca 2600606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 4971328 - 4971290
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  4971328 aaaagttgtcacaaaatggttgtacaaatatcatttctc 4971290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 19426618 - 19426580
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  19426618 aaaagttgtcacaaaatggttgtacaaatatcatttctc 19426580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 37392081 - 37392043
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  37392081 aaaagttgtcaaaaaatggttgtacaaatatcatttctc 37392043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 583
Target Start/End: Complemental strand, 49069289 - 49069247
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||||| ||| || ||||||||||||||||||||||    
T  49069289 acaaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 49069247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 2323341 - 2323304
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  2323341 aaagttgtcataaaattgttgtacaaatatcatttctc 2323304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 26041358 - 26041321
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  26041358 aaagttgtcataaaatggttgtacgaatatcatttctc 26041321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 27164867 - 27164908
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  27164867 tacaaaagttgtcacaaattgattgtacaaatatcatttctc 27164908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 28862104 - 28862141
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||  |||||||||||||||||||    
T  28862104 aaagttgtcataaaatggatgtacaaatatcatttctc 28862141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 30864447 - 30864488
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  30864447 tacaaaagttgtcacaaattggttgtacaaatatcatttctc 30864488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 37856188 - 37856225
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  37856188 aaagttgtcacaaaatggttgtacaaatatcatttctc 37856225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 43444672 - 43444635
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| || ||||||||||||||||||||    
T  43444672 aaagttgtcataaagtggttgtacaaatatcatttctc 43444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 44511180 - 44511139
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| |||||| |||||| |||||||||||||    
T  44511180 tacaaaagttgtcacaaaatggttgtacgaatatcatttctc 44511139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 12007217 - 12007257
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  12007217 acaaaagttgtcaaaaaatggttgttcaaatatcatttctc 12007257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 544 - 584
Target Start/End: Original strand, 26041456 - 26041496
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctcaag 584  Q
    |||||||||||||||||  ||||||||||||||| ||||||    
T  26041456 aaagttgtcataaaatggatgtacaaatatcattgctcaag 26041496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 28109995 - 28109955
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  28109995 aaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 28109955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 31398163 - 31398124
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  31398163 acaaaagttgt-ataaaatggttgtacaaatatcatttctc 31398124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 540 - 580
Target Start/End: Original strand, 37325849 - 37325889
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  37325849 tacaaaagttgtcacaaattggttgtacaaatatcatttct 37325889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 41893955 - 41893915
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  41893955 acaaaagttgtcataaaatggatgttcaaatatcatttctc 41893915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 47448866 - 47448826
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  47448866 acaaaagttgtcaaaaaatggttgttcaaatatcatttctc 47448826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 545 - 581
Target Start/End: Complemental strand, 47684210 - 47684174
Alignment:
Q  545 aagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||| |||| |||||||||||||||    
T  47684210 aagttgtcataaaatgcttgttcaaatatcatttctc 47684174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 49025337 - 49025373
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    ||||||||||||||||  |||||||||||||||||||    
T  49025337 aaagttgtcataaaataattgtacaaatatcatttct 49025373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 3299138 - 3299176
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  3299138 aaaagttgtcataaaatggttgtacaaatatcatttctc 3299176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 36383503 - 36383462
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  36383503 tacaaaagttgtcacaaaatctttgtacaaatatcatttctc 36383462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 15123968 - 15124008
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  15123968 caaaagttgtcaaaaaatggttgtacaaatatcatttctca 15124008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 30974022 - 30974062
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  30974022 aaaagttgtcataaaatgattgtaaaaatatcatttctcaa 30974062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 38821406 - 38821366
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  38821406 acaaaagttgtcataaaatggttgttcaaatatcatttctc 38821366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 44050055 - 44050015
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  44050055 acaaaagttgtcataaaatggttgtacaagtatcatttctc 44050015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 14954631 - 14954670
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  14954631 caaaagttgtcacaaaatgtatgtacaaatatcatttctc 14954670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Complemental strand, 29168764 - 29168725
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  29168764 caaaagttgtcaaaaaatggttgtacaaatatcatttctc 29168725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 583
Target Start/End: Original strand, 30487499 - 30487542
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||||| ||| || ||||||||||||||||||||||    
T  30487499 tacaaaagttgtcacaaattggttgtacaaatatcatttctcaa 30487542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 31417138 - 31417103
Alignment:
Q  304 attttcactctaggattcaatagagaaagcttgaat 339  Q
    |||||||||||| |||||||||||||||||||||||    
T  31417138 attttcactctatgattcaatagagaaagcttgaat 31417103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 583
Target Start/End: Complemental strand, 35334561 - 35334518
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||| | |||||||| ||||||||||||||||||||||    
T  35334561 tacaaaagttattataaaatggttgtacaaatatcatttctcaa 35334518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 36909875 - 36909914
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  36909875 caaaagttgtcacaaaatggttgtacaaatatcatttctc 36909914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 586
Target Start/End: Complemental strand, 5852515 - 5852469
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaagct 586  Q
    ||||||||||||   |||||| |||||||||||||||||||||||||    
T  5852515 tacaaaagttgtacaaaaatggttgtacaaatatcatttctcaagct 5852469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 6666058 - 6666020
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  6666058 aaaagttgtaataaaatggttgtacaaatatcatttctc 6666020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 583
Target Start/End: Original strand, 6999099 - 6999141
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||||||||||||  ||| |||||||||||||||||    
T  6999099 acaaaagttgtcataaaatggatgttcaaatatcatttctcaa 6999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 7498024 - 7498062
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  7498024 aaaagttgtaataaaatggttgtacaaatatcatttctc 7498062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 10687979 - 10687941
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  10687979 aaaagttgtcacaaattgtttgtacaaatatcatttctc 10687941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 578
Target Start/End: Original strand, 12877460 - 12877498
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcattt 578  Q
    |||||||||||||||||| || |||||||||||||||||    
T  12877460 tacaaaagttgtcataaattggttgtacaaatatcattt 12877498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 547 - 581
Target Start/End: Complemental strand, 18373881 - 18373847
Alignment:
Q  547 gttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||||||||||||||||||||    
T  18373881 gttgtcataaaatgattgtacaaatatcatttctc 18373847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 584
Target Start/End: Complemental strand, 22303242 - 22303200
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaag 584  Q
    |||||||||||| |||||  |||||||||||||||||||||||    
T  22303242 caaaagttgtcaaaaaatagttgtacaaatatcatttctcaag 22303200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 578
Target Start/End: Original strand, 43791832 - 43791870
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcattt 578  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  43791832 tacaaaagttgtcataaaatggatgtacaaatatcattt 43791870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 44189865 - 44189827
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  44189865 aaaagttgtcataaagtggttgtacaaatatcatttctc 44189827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 583
Target Start/End: Original strand, 45376252 - 45376294
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||||| ||| || ||||||||||||||||||||||    
T  45376252 acaaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 45376294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 3196117 - 3196158
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  3196117 tacaaaagttgtcacaaattgattgtacaaatatcatttctc 3196158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 580
Target Start/End: Complemental strand, 8087409 - 8087372
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    |||||||||||||||||  |||||||||||||||||||    
T  8087409 aaaagttgtcataaaataattgtacaaatatcatttct 8087372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 8482255 - 8482292
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| || ||||||||||||||||||||    
T  8482255 aaagttgtcataaagtggttgtacaaatatcatttctc 8482292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 10749717 - 10749750
Alignment:
Q  548 ttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| ||||||||||||||||||||    
T  10749717 ttgtcataaaatggttgtacaaatatcatttctc 10749750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 14255342 - 14255301
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||||||||||  |||||||||||| ||||||||    
T  14255342 acaaaagttgtcataaaatagttgtacaaatattatttctca 14255301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 18508119 - 18508078
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| ||||||||||  |||||||||||||||||||    
T  18508119 tacaaaagttatcataaaatggatgtacaaatatcatttctc 18508078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 22353198 - 22353235
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  22353198 aaagttgtcacaaaatgattgtacaaatatcatttctc 22353235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 25086372 - 25086335
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  25086372 aaagttgtcataaaattgttgtacaaatatcatttctc 25086335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Complemental strand, 25507294 - 25507253
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||| ||| || ||||||||||||||||||||||    
T  25507294 caaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 25507253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 27307261 - 27307302
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  27307261 tacaaaagttgtcacaaattgattgtacaaatatcatttctc 27307302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 29795484 - 29795447
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  29795484 aaagttgtcacaaaatggttgtacaaatatcatttctc 29795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 40874293 - 40874334
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||| | |||||| ||||||||||||||||||||||    
T  40874293 caaaagttgttaaaaaatggttgtacaaatatcatttctcaa 40874334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 6336292 - 6336252
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  6336292 acaaaagttgttagaaaatggttgtacaaatatcatttctc 6336252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 13765440 - 13765400
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  13765440 acaaaagttgtcataaaatggatgttcaaatatcatttctc 13765400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 28165167 - 28165127
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| |||||| |||||||| |||||||||||||    
T  28165167 aaaagttgtcacaaaatggttgtacaagtatcatttctcaa 28165127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 30416399 - 30416359
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||| |||||| |||||| |||||||||||||||||||||    
T  30416399 caaaaattgtcaaaaaatgattgtacaaatatcatttctca 30416359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 581
Target Start/End: Complemental strand, 37601258 - 37601226
Alignment:
Q  549 tgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| ||||||||||||||||||||    
T  37601258 tgtcataaaatgattgtacaaatatcatttctc 37601226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 40504264 - 40504224
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||| ||||||||||||||| |||| |||||||||||||||    
T  40504264 acaacagttgtcataaaatggttgttcaaatatcatttctc 40504224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 43621980 - 43622020
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  43621980 caaaagttgtcataaaatagttgtacaaatatcattactca 43622020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000009; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 11789847 - 11789810
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11789847 aaagttgtcataaagtgtttgtacaaatatcatttctc 11789810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 41273556 - 41273515
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  41273556 tacaaaagttgtcacaaattgtttgtacaaatatcatttctc 41273515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 544 - 583
Target Start/End: Original strand, 13884194 - 13884233
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  13884194 aaagttgtcaaaaaatgattgtacaaatatcatttctcaa 13884233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Complemental strand, 26871084 - 26871045
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  26871084 aaaagttgtcataaagtgattgtacaaatatcatttctca 26871045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Complemental strand, 36064069 - 36064030
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  36064069 caaaagttgtcacaaaatgattgtacaaatatcatttctc 36064030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 38844823 - 38844862
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  38844823 aaaagttgtcacaaaatggttgtacaaatatcatttctca 38844862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 547 - 581
Target Start/End: Complemental strand, 6161982 - 6161948
Alignment:
Q  547 gttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||||||||||||||||||||    
T  6161982 gttgtcataaaatggttgtacaaatatcatttctc 6161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 546 - 584
Target Start/End: Original strand, 9334263 - 9334301
Alignment:
Q  546 agttgtcataaaatgtttgtacaaatatcatttctcaag 584  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  9334263 agttgtcataaaatggttgtacaaataacatttctcaag 9334301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 14531662 - 14531620
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||| |||||||||  |||||||||||||||||||||    
T  14531662 tacaaaagttatcataaaatagttgtacaaatatcatttctca 14531620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 583
Target Start/End: Original strand, 25830277 - 25830319
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| | |||||| ||||||||||||||||||||||    
T  25830277 acaaaagttgttagaaaatggttgtacaaatatcatttctcaa 25830319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 37568647 - 37568685
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  37568647 aaaaattgtcacaaaatgtttgtacaaatatcatttctc 37568685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Original strand, 5601018 - 5601059
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||| |||||| |||| ||||||||||||||||    
T  5601018 acaaaagttgtcaaaaaatggttgttcaaatatcatttctca 5601059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 5639602 - 5639561
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||| |||||| |||| ||||||||||||||||    
T  5639602 acaaaagttgtcaaaaaatggttgttcaaatatcatttctca 5639561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 5771906 - 5771947
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| |||||| |||| |||||||||||||||    
T  5771906 tacaaaagttgtcacaaaatggttgttcaaatatcatttctc 5771947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 5772002 - 5772043
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| |||||| |||| |||||||||||||||    
T  5772002 tacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 5772043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 580
Target Start/End: Complemental strand, 6806946 - 6806909
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  6806946 aaaagttgtcacaaaatgattgtacaaatatcatttct 6806909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 8410378 - 8410415
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  8410378 aaagctgtcataaaatgattgtacaaatatcatttctc 8410415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 9314452 - 9314411
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||| |||||||||||||  |||||||||||||||||||    
T  9314452 tacaaaaattgtcataaaatggatgtacaaatatcatttctc 9314411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 12655963 - 12655922
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| | |||||||| ||||||||||||||||||||    
T  12655963 tacaaaagttattataaaatggttgtacaaatatcatttctc 12655922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Complemental strand, 12707188 - 12707147
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||||||||||  ||| |||||||||||||||||    
T  12707188 caaaagttgtcataaaatggatgttcaaatatcatttctcaa 12707147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 16487647 - 16487610
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  16487647 aaagttgtcataaaatggttgttcaaatatcatttctc 16487610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 20288574 - 20288533
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  20288574 tacaaaagttgtcacaaattggttgtacaaatatcatttctc 20288533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 21075203 - 21075162
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  21075203 tacaaaagttgtcacaaattggttgtacaaatatcatttctc 21075162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 582
Target Start/End: Original strand, 21273745 - 21273782
Alignment:
Q  545 aagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  21273745 aagttgtcacaaaatggttgtacaaatatcatttctca 21273782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 26026936 - 26026895
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||| |||||| |||| ||||||||||||||||    
T  26026936 acaaaagttgtcaaaaaatggttgttcaaatatcatttctca 26026895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 37392151 - 37392188
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  37392151 aaagttgtcaaaaaatggttgtacaaatatcatttctc 37392188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 40380322 - 40380281
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  40380322 tacaaaagttgtcataaaatagatgtacaaatatcatttctc 40380281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 67192 - 67232
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  67192 acaaaagttgttagaaaatggttgtacaaatatcatttctc 67232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 540 - 580
Target Start/End: Original strand, 3207441 - 3207481
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    |||||||| ||||||||||||  ||||||||||||||||||    
T  3207441 tacaaaaggtgtcataaaatggatgtacaaatatcatttct 3207481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 4658294 - 4658334
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  4658294 acaaaagttgtcataaaatggatgttcaaatatcatttctc 4658334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 7598748 - 7598708
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  7598748 acaaaagttgtcaaaaaatggttgttcaaatatcatttctc 7598708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 10644833 - 10644873
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  10644833 acaaaagttgttacaaaatggttgtacaaatatcatttctc 10644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 20473817 - 20473777
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||| |||| |||||||| ||||||||||||||||||||||    
T  20473817 aaaaattgttataaaatggttgtacaaatatcatttctcaa 20473777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 22767170 - 22767130
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||| | |||||| ||||||||||||||||||||||    
T  22767170 aaaagttgtgagaaaatggttgtacaaatatcatttctcaa 22767130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 33100500 - 33100540
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||||| |||| |||||||||||||||    
T  33100500 acaaaagttgttataaaatggttgttcaaatatcatttctc 33100540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 34018847 - 34018807
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||| |||||| |||| ||||||||||||||||    
T  34018847 caaaagttgtcagaaaatggttgttcaaatatcatttctca 34018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 35937544 - 35937584
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||| | |||||| |||||||||||||||||||||    
T  35937544 caaaagttgttacaaaatggttgtacaaatatcatttctca 35937584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 43290898 - 43290938
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||||||| ||  |||||||||||||||||||||    
T  43290898 aaaagttgtcataaagtggatgtacaaatatcatttctcaa 43290938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000009; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 3339529 - 3339570
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  3339529 tacaaaagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 15666806 - 15666844
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  15666806 aaaagttgtcagaaaatggttgtacaaatatcatttctc 15666844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 15722536 - 15722574
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  15722536 aaaagttgtcacaaaatgattgtacaaatatcatttctc 15722574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 19789109 - 19789147
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  19789109 aaaagttgtaataaaatggttgtacaaatatcatttctc 19789147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 21857605 - 21857639
Alignment:
Q  548 ttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||| |||||||||||||||||||||    
T  21857605 ttgtcataaaatggttgtacaaatatcatttctca 21857639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 32729927 - 32729889
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  32729927 aaaagttgtcagaaaatggttgtacaaatatcatttctc 32729889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 1897734 - 1897697
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| || ||||||||||||||||||||    
T  1897734 aaagttgtcataaagtggttgtacaaatatcatttctc 1897697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 2056824 - 2056783
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  2056824 tacaaaagttgtcacaaattggttgtacaaatatcatttctc 2056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 3180026 - 3180063
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  3180026 aaagttgtcaaaaaatgattgtacaaatatcatttctc 3180063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Original strand, 11635566 - 11635607
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||| |||||| |||| ||||||||||||||||    
T  11635566 acaaaagttgtcaaaaaatgattgttcaaatatcatttctca 11635607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 16328724 - 16328761
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  16328724 aaagttgttataaaatggttgtacaaatatcatttctc 16328761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 17551409 - 17551450
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| |||||| |||| |||||||||||||||    
T  17551409 tacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 17551450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 27334899 - 27334858
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| |||||  ||||||||||||||||||||    
T  27334899 tacaaaagttgtcacaaaatagttgtacaaatatcatttctc 27334858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 27395639 - 27395598
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| |||||  ||||||||||||||||||||    
T  27395639 tacaaaagttgtcacaaaatagttgtacaaatatcatttctc 27395598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 31417330 - 31417367
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  31417330 aaagttgtcataaaatgattgtataaatatcatttctc 31417367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Original strand, 31883334 - 31883375
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  31883334 tacaaaagttgtcaaaaagtggttgtacaaatatcatttctc 31883375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 580
Target Start/End: Complemental strand, 32621839 - 32621802
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  32621839 aaaagttgtcataaaatggttgtataaatatcatttct 32621802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 8505805 - 8505845
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  8505805 acaaaagttgtcaaaaaatgattgttcaaatatcatttctc 8505845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 20822899 - 20822939
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  20822899 acaaaagttgtcataaaatggatgttcaaatatcatttctc 20822939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 25127864 - 25127904
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  25127864 acaaaagttgttacaaaatggttgtacaaatatcatttctc 25127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 32459548 - 32459588
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||  ||| |||||||||||||||    
T  32459548 acaaaagttgtcataaaatggatgttcaaatatcatttctc 32459588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000009; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 583
Target Start/End: Complemental strand, 27440518 - 27440477
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  27440518 caaaagttgtcacaaaatgattgtacaaatatcatttctcaa 27440477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 31708408 - 31708368
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  31708408 aaaagttgttataaaatggttgtacaaatatcatttctcaa 31708368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Complemental strand, 2629857 - 2629818
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  2629857 caaaagttgtcaaaaaatggttgtacaaatatcatttctc 2629818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 583
Target Start/End: Original strand, 3263538 - 3263581
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||||| ||| || ||||||||||||||||||||||    
T  3263538 tacaaaagttgtcacaaattggttgtacaaatatcatttctcaa 3263581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 583
Target Start/End: Original strand, 9599758 - 9599801
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||||| ||| || ||||||||||||||||||||||    
T  9599758 tacaaaagttgtcacaaattggttgtacaaatatcatttctcaa 9599801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Complemental strand, 14914411 - 14914372
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  14914411 caaaagttgtcacaaaatggttgtacaaatatcatttctc 14914372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Complemental strand, 17063903 - 17063864
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  17063903 aaaagttgtcaaaaaatgattgtacaaatatcatttctca 17063864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Complemental strand, 42699095 - 42699056
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  42699095 aaaagttgtcacaaaatggttgtacaaatatcatttctca 42699056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 583
Target Start/End: Original strand, 3109618 - 3109660
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||||| ||| || ||||||||||||||||||||||    
T  3109618 acaaaagttgtcacaaattgattgtacaaatatcatttctcaa 3109660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 4820196 - 4820154
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||| ||||||||||||  ||||||||||||||||||||    
T  4820196 tacaaaagatgtcataaaatggatgtacaaatatcatttctca 4820154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 7144615 - 7144577
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  7144615 aaaagttatcataaaatggttgtacaaatatcatttctc 7144577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 547 - 581
Target Start/End: Complemental strand, 8897416 - 8897382
Alignment:
Q  547 gttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||||||||||||||||||||    
T  8897416 gttgtcataaaatggttgtacaaatatcatttctc 8897382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 578
Target Start/End: Complemental strand, 9065468 - 9065434
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcattt 578  Q
    ||||||||||||||||| |||||||||||||||||    
T  9065468 aaagttgtcataaaatggttgtacaaatatcattt 9065434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 16143427 - 16143389
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  16143427 aaagttgtcacaaaatggttgtacaaatatcatttctca 16143389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 582
Target Start/End: Original strand, 30574407 - 30574449
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||||| ||| || |||||||||||||||||||||    
T  30574407 tacaaaagttgtcacaaattggttgtacaaatatcatttctca 30574449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 4719690 - 4719649
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||| ||| || |||||||||||||||||||||    
T  4719690 acaaaagttgtcaaaaattggttgtacaaatatcatttctca 4719649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 6517752 - 6517711
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  6517752 acaaaagttgtcataaaatggatgttcaaatatcatttctca 6517711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 8728613 - 8728654
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||| ||| || ||||||||||||||||||||||    
T  8728613 caaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 8728654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 9594519 - 9594478
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  9594519 tacaaaagttgtcacaaattggttgtacaaatatcatttctc 9594478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 13734383 - 13734420
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||||| || ||||||||||||||||||||    
T  13734383 aaagttgtcataaagtggttgtacaaatatcatttctc 13734420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 14206437 - 14206400
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  14206437 aaagttgtcaaaaaatggttgtacaaatatcatttctc 14206400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 21156027 - 21155986
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||| |||||| |||| ||||||||||||||||    
T  21156027 acaaaagttgtcaaaaaatggttgttcaaatatcatttctca 21155986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 22098295 - 22098254
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||| | |||||| |||||||||||||||||||||    
T  22098295 acaaaagttgttagaaaatggttgtacaaatatcatttctca 22098254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 28501633 - 28501592
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||| |||||| |||||| ||||||||||||||||||||    
T  28501633 tacaaaaattgtcacaaaatggttgtacaaatatcatttctc 28501592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 581
Target Start/End: Complemental strand, 29765871 - 29765830
Alignment:
Q  540 tacaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||  ||||||| ||||||||||||||||||||    
T  29765871 tacaaaagttgtactaaaatggttgtacaaatatcatttctc 29765830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 580
Target Start/End: Complemental strand, 34400656 - 34400619
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttct 580  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  34400656 aaaaattgtcataaaatgattgtacaaatatcatttct 34400619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 39788738 - 39788779
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||| | |||| ||||||||||||||||||||||    
T  39788738 caaaagttgtcacataatggttgtacaaatatcatttctcaa 39788779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 41621960 - 41622001
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||| ||| || ||||||||||||||||||||||    
T  41621960 caaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 41622001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 1293117 - 1293157
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  1293117 acaaaagttgttaaaaaatggttgtacaaatatcatttctc 1293157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 4088483 - 4088443
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  4088483 acaaaagttgttataaaatggatgtacaaatatcatttctc 4088443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 6420710 - 6420670
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| |||||| ||||| ||||||||||||||||    
T  6420710 aaaagttgtcacaaaatggttgtagaaatatcatttctcaa 6420670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 9933539 - 9933499
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    |||||||||||||||||||  ||| ||||||||||||||||    
T  9933539 caaaagttgtcataaaatgaatgttcaaatatcatttctca 9933499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 10865357 - 10865317
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||| ||| ||||||||||| |||||||||||||||    
T  10865357 acaaaagttctcacaaaatgtttgttcaaatatcatttctc 10865317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 11148551 - 11148511
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  11148551 acaaaagttgtcaaaaattgattgtacaaatatcatttctc 11148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 12718413 - 12718453
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  12718413 aaaagttgtcacaaattggttgtacaaatatcatttctcaa 12718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Original strand, 12779639 - 12779679
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  12779639 aaaagttgtcacaaattggttgtacaaatatcatttctcaa 12779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 13089813 - 13089853
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  13089813 acaaaagttgtcaaaaaatggttgttcaaatatcatttctc 13089853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 15639423 - 15639383
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||||||||||  ||||| ||||||||||||||||||||||    
T  15639423 aaaagttgtcaccaaatggttgtacaaatatcatttctcaa 15639383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 18695358 - 18695318
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  18695358 acaaaagttgttacaaaatggttgtacaaatatcatttctc 18695318  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 19983879 - 19983839
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    |||| ||||||||||||  ||||||||||||||||||||||    
T  19983879 aaaaattgtcataaaataattgtacaaatatcatttctcaa 19983839  T

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Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 21012608 - 21012568
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||| ||||||||||||| |||||||||||| |||||||    
T  21012608 acaaaaattgtcataaaatggttgtacaaatataatttctc 21012568  T

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Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 27546103 - 27546063
Alignment:
Q  541 acaaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||| ||||||||||||| |||| |||||||||||||||    
T  27546103 acaaaatttgtcataaaatgattgttcaaatatcatttctc 27546063  T

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Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 34381050 - 34381010
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  34381050 aaaagttgtcacaaagtggttgtacaaatatcatttctcaa 34381010  T

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Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 41460154 - 41460114
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||||| |||||| ||||| ||||||||||||||||    
T  41460154 aaaagttgtcaaaaaatgattgtataaatatcatttctcaa 41460114  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 155944 - 155904
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctcaa 583  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  155944 aaaagttgtaataaaatggttgtacaaatatcatttctcaa 155904  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Complemental strand, 337157 - 337118
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  337157 caaaagttgtcagaaaatggttgtacaaatatcatttctc 337118  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Complemental strand, 6465 - 6426
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctca 582  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  6465 aaaagttgtcataaaatggatgtacaaatatcatttctca 6426  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 4353 - 4315
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  4353 aaaagttatcataaaatggttgtacaaatatcatttctc 4315  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 60507 - 60469
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  60507 aaaagttgtaataaaatggttgtacaaatatcatttctc 60469  T

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Target: scaffold0054 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 31623 - 31660
Alignment:
Q  544 aaagttgtcataaaatgtttgtacaaatatcatttctc 581  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  31623 aaagttgtcaaaaaatggttgtacaaatatcatttctc 31660  T

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Target: scaffold0252 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 578
Target Start/End: Original strand, 8007 - 8043
Alignment:
Q  542 caaaagttgtcataaaatgtttgtacaaatatcattt 578  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  8007 caaaagttgtcataaaatggttgtataaatatcattt 8043  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 579
Target Start/End: Complemental strand, 134034 - 133998
Alignment:
Q  543 aaaagttgtcataaaatgtttgtacaaatatcatttc 579  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  134034 aaaagttgtcatataatggttgtacaaatatcatttc 133998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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