View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21600_low_1 (Length: 718)

Name: NF21600_low_1
Description: NF21600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21600_low_1
NF21600_low_1
[»] chr1 (87 HSPs)
chr1 (18-710)||(29143869-29144549)
chr1 (469-586)||(48450550-48450666)
chr1 (471-518)||(1486646-1486693)
chr1 (466-580)||(22881564-22881689)
chr1 (514-586)||(6612178-6612250)
chr1 (467-518)||(9828125-9828176)
chr1 (467-518)||(40917830-40917881)
chr1 (471-518)||(42359391-42359438)
chr1 (514-589)||(46348390-46348465)
chr1 (467-556)||(30359398-30359486)
chr1 (467-515)||(21365990-21366038)
chr1 (464-512)||(22947806-22947854)
chr1 (467-518)||(9690211-9690262)
chr1 (471-518)||(16297223-16297270)
chr1 (468-518)||(6427545-6427595)
chr1 (469-515)||(22515827-22515873)
chr1 (468-518)||(37598901-37598951)
chr1 (468-518)||(46940747-46940797)
chr1 (515-576)||(113289-113350)
chr1 (469-518)||(18190048-18190097)
chr1 (466-519)||(42325628-42325681)
chr1 (471-586)||(398735-398844)
chr1 (469-517)||(5944365-5944413)
chr1 (466-518)||(15765828-15765880)
chr1 (514-558)||(18190115-18190159)
chr1 (514-601)||(38078668-38078756)
chr1 (514-586)||(41877477-41877549)
chr1 (469-517)||(47989579-47989627)
chr1 (467-518)||(5898204-5898255)
chr1 (467-518)||(16164242-16164293)
chr1 (514-565)||(21378579-21378630)
chr1 (469-512)||(27965940-27965983)
chr1 (470-517)||(40258874-40258921)
chr1 (514-565)||(40258940-40258991)
chr1 (469-515)||(16812629-16812675)
chr1 (469-515)||(18556385-18556431)
chr1 (508-570)||(31015039-31015101)
chr1 (468-518)||(34741917-34741966)
chr1 (469-518)||(113363-113412)
chr1 (469-518)||(1704935-1704984)
chr1 (468-517)||(1815328-1815377)
chr1 (469-518)||(2218298-2218347)
chr1 (474-601)||(3490352-3490484)
chr1 (469-518)||(8117120-8117169)
chr1 (469-518)||(18337399-18337448)
chr1 (469-518)||(19562556-19562604)
chr1 (468-513)||(31694638-31694683)
chr1 (469-506)||(35702542-35702579)
chr1 (469-518)||(46348323-46348372)
chr1 (514-586)||(1486716-1486788)
chr1 (514-590)||(1815233-1815309)
chr1 (514-586)||(5927347-5927419)
chr1 (468-512)||(7918153-7918197)
chr1 (470-518)||(10233326-10233374)
chr1 (517-589)||(18556466-18556538)
chr1 (470-518)||(21032287-21032335)
chr1 (514-558)||(24577193-24577237)
chr1 (471-515)||(33202976-33203020)
chr1 (522-602)||(36878425-36878505)
chr1 (469-513)||(36878541-36878585)
chr1 (474-518)||(40181941-40181984)
chr1 (514-586)||(47989478-47989549)
chr1 (469-512)||(15449170-15449213)
chr1 (471-518)||(17778623-17778670)
chr1 (514-557)||(18337338-18337381)
chr1 (514-565)||(22515894-22515945)
chr1 (517-580)||(31672905-31672968)
chr1 (514-585)||(42359456-42359527)
chr1 (542-580)||(9103626-9103664)
chr1 (512-586)||(14359527-14359600)
chr1 (522-580)||(22794093-22794151)
chr1 (469-514)||(6574051-6574096)
chr1 (481-518)||(6612112-6612149)
chr1 (469-518)||(15323238-15323287)
chr1 (481-518)||(17831474-17831511)
chr1 (514-571)||(19058863-19058920)
chr1 (474-523)||(26830652-26830701)
chr1 (470-503)||(28663682-28663715)
chr1 (469-518)||(32461393-32461442)
chr1 (489-558)||(34298444-34298513)
chr1 (468-517)||(40747706-40747755)
chr1 (469-518)||(43113004-43113053)
chr1 (468-517)||(43492433-43492482)
chr1 (470-523)||(45534131-45534184)
chr1 (473-518)||(48040418-48040463)
chr1 (466-515)||(51410098-51410147)
chr1 (469-518)||(52903316-52903365)
[»] chr5 (68 HSPs)
chr5 (469-586)||(14674249-14674368)
chr5 (514-602)||(21576752-21576841)
chr5 (465-517)||(38464309-38464361)
chr5 (477-558)||(15405025-15405106)
chr5 (514-579)||(24906308-24906373)
chr5 (466-579)||(6247609-6247732)
chr5 (514-631)||(21191063-21191181)
chr5 (468-518)||(14873592-14873642)
chr5 (514-580)||(17177030-17177096)
chr5 (468-586)||(6326252-6326376)
chr5 (469-517)||(7677787-7677835)
chr5 (469-517)||(19820328-19820376)
chr5 (514-590)||(39698517-39698593)
chr5 (471-518)||(21190998-21191045)
chr5 (467-518)||(43564951-43565002)
chr5 (514-580)||(31084309-31084375)
chr5 (472-518)||(39268541-39268587)
chr5 (469-515)||(39698625-39698671)
chr5 (515-589)||(43001777-43001851)
chr5 (514-598)||(7997173-7997258)
chr5 (481-518)||(17088361-17088398)
chr5 (469-518)||(21576685-21576734)
chr5 (469-518)||(35017113-35017162)
chr5 (466-514)||(15086552-15086600)
chr5 (481-517)||(15382556-15382592)
chr5 (469-517)||(17123119-17123166)
chr5 (514-586)||(21522730-21522802)
chr5 (514-586)||(21533296-21533368)
chr5 (469-602)||(8419990-8420122)
chr5 (514-585)||(19579682-19579753)
chr5 (466-517)||(39342513-39342564)
chr5 (514-565)||(42893361-42893412)
chr5 (468-518)||(27932305-27932355)
chr5 (468-518)||(39695950-39695999)
chr5 (469-518)||(2419937-2419986)
chr5 (469-518)||(2436981-2437030)
chr5 (468-505)||(10298633-10298670)
chr5 (469-518)||(17593663-17593712)
chr5 (473-518)||(30183630-30183675)
chr5 (469-518)||(31084398-31084447)
chr5 (464-504)||(2548464-2548504)
chr5 (514-586)||(13287406-13287478)
chr5 (469-513)||(15884052-15884096)
chr5 (471-511)||(16203746-16203786)
chr5 (542-586)||(19552578-19552622)
chr5 (469-517)||(21194063-21194111)
chr5 (469-505)||(22423764-22423800)
chr5 (464-504)||(36838615-36838655)
chr5 (468-516)||(37328774-37328822)
chr5 (471-511)||(43001882-43001922)
chr5 (467-522)||(15410375-15410430)
chr5 (471-518)||(23015926-23015973)
chr5 (514-565)||(41633736-41633787)
chr5 (465-503)||(6770621-6770659)
chr5 (467-505)||(11596396-11596434)
chr5 (468-518)||(17393304-17393354)
chr5 (544-586)||(36642799-36642841)
chr5 (473-506)||(4105341-4105374)
chr5 (475-508)||(6035559-6035592)
chr5 (469-514)||(16304366-16304411)
chr5 (471-504)||(18421779-18421812)
chr5 (469-518)||(19429497-19429546)
chr5 (482-511)||(19579789-19579818)
chr5 (469-518)||(21522831-21522880)
chr5 (469-518)||(21533397-21533446)
chr5 (469-518)||(30098407-30098456)
chr5 (469-518)||(32766872-32766921)
chr5 (469-518)||(42893430-42893479)
[»] chr4 (72 HSPs)
chr4 (468-596)||(30298916-30299049)
chr4 (468-596)||(30327784-30327917)
chr4 (515-596)||(11596360-11596442)
chr4 (471-603)||(22440559-22440695)
chr4 (469-518)||(23292926-23292975)
chr4 (467-517)||(16184902-16184952)
chr4 (465-515)||(53381526-53381576)
chr4 (469-517)||(715545-715593)
chr4 (469-517)||(752871-752919)
chr4 (466-518)||(18513172-18513224)
chr4 (514-586)||(21945483-21945555)
chr4 (467-517)||(11596295-11596345)
chr4 (467-517)||(17876237-17876287)
chr4 (472-518)||(28084594-28084640)
chr4 (514-580)||(34306811-34306876)
chr4 (469-518)||(24343583-24343632)
chr4 (470-518)||(3947702-3947750)
chr4 (468-508)||(5775303-5775343)
chr4 (470-518)||(17425348-17425396)
chr4 (514-586)||(23292993-23293065)
chr4 (469-517)||(29205539-29205587)
chr4 (470-518)||(30982808-30982856)
chr4 (469-558)||(37203272-37203371)
chr4 (468-512)||(40784029-40784073)
chr4 (466-517)||(3064865-3064916)
chr4 (470-517)||(5922532-5922579)
chr4 (467-518)||(19482749-19482800)
chr4 (469-512)||(36635406-36635449)
chr4 (468-518)||(944601-944651)
chr4 (469-515)||(12895214-12895260)
chr4 (469-515)||(28964188-28964234)
chr4 (514-568)||(29205442-29205496)
chr4 (468-518)||(30094083-30094133)
chr4 (515-565)||(51701259-51701309)
chr4 (470-519)||(40965340-40965389)
chr4 (469-518)||(42640594-42640643)
chr4 (514-586)||(2361982-2362054)
chr4 (474-518)||(3712458-3712502)
chr4 (469-517)||(8423658-8423706)
chr4 (542-586)||(12628620-12628664)
chr4 (470-518)||(18575984-18576032)
chr4 (473-517)||(21945574-21945618)
chr4 (514-558)||(28964255-28964299)
chr4 (466-518)||(35161106-35161158)
chr4 (469-517)||(47264068-47264116)
chr4 (514-565)||(3947773-3947824)
chr4 (470-505)||(4383449-4383484)
chr4 (466-517)||(7214463-7214514)
chr4 (515-586)||(19482648-19482719)
chr4 (467-518)||(24613628-24613679)
chr4 (469-538)||(28470422-28470484)
chr4 (514-565)||(38847019-38847070)
chr4 (515-586)||(40481617-40481687)
chr4 (464-518)||(2625954-2626008)
chr4 (471-517)||(4157220-4157266)
chr4 (471-517)||(4157507-4157553)
chr4 (514-596)||(12895123-12895204)
chr4 (520-597)||(14465088-14465166)
chr4 (467-517)||(16073465-16073515)
chr4 (514-580)||(16303273-16303339)
chr4 (476-518)||(21873309-21873351)
chr4 (476-518)||(21929170-21929212)
chr4 (515-604)||(27706185-27706274)
chr4 (465-515)||(40224434-40224484)
chr4 (514-559)||(6485618-6485663)
chr4 (469-518)||(12884347-12884396)
chr4 (469-514)||(12895055-12895100)
chr4 (469-518)||(18966579-18966628)
chr4 (481-518)||(32910633-32910670)
chr4 (469-518)||(34306744-34306793)
chr4 (514-602)||(49430990-49431078)
chr4 (481-518)||(49431096-49431133)
[»] scaffold0027 (1 HSPs)
scaffold0027 (469-586)||(46662-46776)
[»] chr6 (73 HSPs)
chr6 (468-586)||(426477-426593)
chr6 (514-601)||(12696290-12696376)
chr6 (469-580)||(7938102-7938219)
chr6 (470-578)||(17341622-17341735)
chr6 (470-579)||(31959146-31959268)
chr6 (514-577)||(7977837-7977900)
chr6 (464-518)||(8776903-8776957)
chr6 (514-580)||(10770681-10770747)
chr6 (514-580)||(16766683-16766749)
chr6 (465-518)||(8365444-8365497)
chr6 (516-589)||(17841598-17841671)
chr6 (469-516)||(3209471-3209518)
chr6 (467-518)||(17327588-17327639)
chr6 (515-586)||(17435179-17435250)
chr6 (463-518)||(34595204-34595259)
chr6 (472-518)||(8389411-8389457)
chr6 (472-518)||(9025448-9025494)
chr6 (467-517)||(10339052-10339102)
chr6 (469-518)||(7248439-7248488)
chr6 (469-518)||(9027237-9027286)
chr6 (469-518)||(9107299-9107348)
chr6 (469-518)||(16766778-16766827)
chr6 (471-512)||(26178620-26178661)
chr6 (469-518)||(28152168-28152217)
chr6 (514-586)||(9107377-9107449)
chr6 (514-586)||(16833288-16833360)
chr6 (470-518)||(17841530-17841578)
chr6 (482-573)||(25207757-25207846)
chr6 (470-518)||(31385000-31385048)
chr6 (469-509)||(32839571-32839611)
chr6 (514-586)||(34595114-34595186)
chr6 (514-602)||(1191707-1191796)
chr6 (519-601)||(5970120-5970202)
chr6 (514-561)||(6327525-6327572)
chr6 (515-586)||(8776981-8777052)
chr6 (519-601)||(31429015-31429097)
chr6 (467-505)||(4878025-4878063)
chr6 (469-515)||(8714064-8714110)
chr6 (455-517)||(13360299-13360361)
chr6 (482-571)||(7801132-7801220)
chr6 (469-518)||(24645551-24645600)
chr6 (514-587)||(28152078-28152150)
chr6 (472-517)||(32978842-32978887)
chr6 (514-586)||(8365526-8365598)
chr6 (465-517)||(12868612-12868664)
chr6 (468-516)||(16833380-16833428)
chr6 (465-517)||(18367918-18367970)
chr6 (514-586)||(23771559-23771630)
chr6 (514-558)||(28715303-28715347)
chr6 (514-558)||(31384928-31384972)
chr6 (471-518)||(12696399-12696446)
chr6 (466-513)||(15489658-15489705)
chr6 (467-518)||(28715365-28715416)
chr6 (469-515)||(5970037-5970083)
chr6 (522-580)||(7265608-7265666)
chr6 (469-515)||(7378052-7378098)
chr6 (522-568)||(7569183-7569229)
chr6 (469-503)||(7723199-7723233)
chr6 (468-506)||(8805523-8805561)
chr6 (467-505)||(10649371-10649409)
chr6 (542-580)||(12868710-12868748)
chr6 (467-517)||(13364643-13364693)
chr6 (480-518)||(21924902-21924940)
chr6 (514-571)||(1681753-1681810)
chr6 (517-586)||(3398599-3398667)
chr6 (469-518)||(4388150-4388199)
chr6 (515-580)||(6349745-6349810)
chr6 (470-518)||(6665282-6665331)
chr6 (469-518)||(7625186-7625235)
chr6 (469-518)||(9629464-9629513)
chr6 (469-518)||(10770607-10770656)
chr6 (465-510)||(12236737-12236782)
chr6 (469-514)||(34073278-34073323)
[»] chr2 (72 HSPs)
chr2 (469-589)||(39323241-39323357)
chr2 (465-518)||(37419824-37419877)
chr2 (514-601)||(21374706-21374794)
chr2 (469-590)||(34221463-34221580)
chr2 (514-586)||(15972853-15972925)
chr2 (514-586)||(30404857-30404929)
chr2 (471-517)||(2438661-2438707)
chr2 (469-603)||(12940898-12941030)
chr2 (467-586)||(20539630-20539753)
chr2 (469-518)||(26769592-26769641)
chr2 (469-518)||(38117099-38117148)
chr2 (469-517)||(18840953-18841001)
chr2 (468-586)||(19536360-19536477)
chr2 (514-589)||(37558954-37559029)
chr2 (514-586)||(21624246-21624319)
chr2 (469-510)||(22084756-22084797)
chr2 (469-518)||(37559047-37559096)
chr2 (469-518)||(41843516-41843565)
chr2 (469-518)||(42511322-42511371)
chr2 (514-586)||(6940235-6940307)
chr2 (469-517)||(11223793-11223841)
chr2 (514-586)||(18421943-18422015)
chr2 (466-518)||(37411181-37411233)
chr2 (471-518)||(19942335-19942382)
chr2 (474-517)||(23058389-23058432)
chr2 (514-580)||(18841020-18841086)
chr2 (522-592)||(28677883-28677953)
chr2 (469-523)||(29367283-29367337)
chr2 (522-592)||(30527610-30527680)
chr2 (471-517)||(36756275-36756321)
chr2 (471-558)||(42832234-42832327)
chr2 (469-518)||(10535685-10535734)
chr2 (469-518)||(12748737-12748786)
chr2 (468-517)||(18622673-18622722)
chr2 (514-586)||(23058449-23058522)
chr2 (469-518)||(27084339-27084388)
chr2 (515-580)||(38117167-38117232)
chr2 (474-518)||(12224293-12224337)
chr2 (522-586)||(16069269-16069333)
chr2 (470-518)||(28596539-28596587)
chr2 (514-558)||(30717537-30717581)
chr2 (469-517)||(34784911-34784959)
chr2 (546-590)||(34994015-34994059)
chr2 (469-513)||(44635568-44635612)
chr2 (470-518)||(44860401-44860449)
chr2 (521-568)||(1886892-1886939)
chr2 (514-565)||(2438726-2438777)
chr2 (514-565)||(11223870-11223921)
chr2 (471-518)||(15657945-15657992)
chr2 (469-504)||(18420363-18420398)
chr2 (542-589)||(19580316-19580363)
chr2 (522-604)||(28412312-28412394)
chr2 (470-512)||(3444827-3444869)
chr2 (469-515)||(15907851-15907897)
chr2 (468-518)||(15972943-15972993)
chr2 (472-518)||(17776668-17776714)
chr2 (468-518)||(20242666-20242716)
chr2 (468-522)||(28677980-28678034)
chr2 (473-515)||(32321341-32321383)
chr2 (468-518)||(34993921-34993971)
chr2 (481-518)||(14996171-14996208)
chr2 (514-586)||(14996230-14996303)
chr2 (469-518)||(15909570-15909619)
chr2 (469-518)||(18631351-18631400)
chr2 (469-518)||(21782744-21782793)
chr2 (470-507)||(23354582-23354619)
chr2 (469-518)||(24009365-24009414)
chr2 (469-518)||(28412427-28412476)
chr2 (469-518)||(30717459-30717508)
chr2 (465-518)||(34006926-34006979)
chr2 (469-518)||(35056949-35056998)
chr2 (542-595)||(37986751-37986803)
[»] chr3 (75 HSPs)
chr3 (514-602)||(25775471-25775561)
chr3 (469-518)||(34185052-34185101)
chr3 (466-518)||(40052382-40052434)
chr3 (514-580)||(10268493-10268559)
chr3 (466-571)||(14979176-14979271)
chr3 (467-517)||(40993273-40993323)
chr3 (469-518)||(27505321-27505370)
chr3 (469-518)||(55401145-55401194)
chr3 (514-586)||(3610613-3610685)
chr3 (515-579)||(4987299-4987363)
chr3 (469-558)||(12083911-12084002)
chr3 (514-586)||(15796301-15796373)
chr3 (469-517)||(20503536-20503584)
chr3 (473-565)||(21256952-21257044)
chr3 (514-586)||(55401055-55401127)
chr3 (471-518)||(4987222-4987269)
chr3 (469-577)||(11610510-11610628)
chr3 (466-517)||(28812597-28812648)
chr3 (467-518)||(41961577-41961628)
chr3 (469-518)||(11252046-11252095)
chr3 (469-518)||(21211364-21211413)
chr3 (469-517)||(8039764-8039812)
chr3 (468-603)||(11658779-11658916)
chr3 (512-600)||(14216859-14216946)
chr3 (512-600)||(14222988-14223075)
chr3 (470-518)||(15999951-15999999)
chr3 (514-601)||(21479083-21479170)
chr3 (514-586)||(28917981-28918053)
chr3 (467-515)||(49651714-49651762)
chr3 (466-518)||(52369857-52369909)
chr3 (470-517)||(8789489-8789536)
chr3 (514-589)||(20503443-20503517)
chr3 (471-518)||(24204983-24205030)
chr3 (471-518)||(25775577-25775624)
chr3 (514-565)||(26508111-26508162)
chr3 (468-518)||(7171571-7171621)
chr3 (514-588)||(10954930-10955004)
chr3 (470-512)||(34910393-34910435)
chr3 (514-592)||(55212937-55213015)
chr3 (474-519)||(1509636-1509681)
chr3 (469-518)||(3163971-3164020)
chr3 (477-518)||(21720842-21720883)
chr3 (469-518)||(25074865-25074914)
chr3 (517-586)||(26492215-26492284)
chr3 (470-518)||(1389908-1389956)
chr3 (469-505)||(4990912-4990948)
chr3 (514-586)||(8587028-8587100)
chr3 (544-592)||(10318071-10318119)
chr3 (514-586)||(24205048-24205120)
chr3 (514-586)||(35312034-35312106)
chr3 (514-565)||(1509540-1509591)
chr3 (469-504)||(8842413-8842448)
chr3 (471-518)||(28918073-28918120)
chr3 (469-512)||(46191283-46191326)
chr3 (514-565)||(51206360-51206411)
chr3 (484-518)||(10955022-10955056)
chr3 (472-518)||(12100339-12100385)
chr3 (514-588)||(14209092-14209165)
chr3 (481-518)||(1509604-1509641)
chr3 (469-518)||(2408590-2408639)
chr3 (476-517)||(3631755-3631796)
chr3 (469-510)||(3730108-3730149)
chr3 (469-518)||(4466540-4466589)
chr3 (522-571)||(8039850-8039899)
chr3 (469-518)||(8071014-8071063)
chr3 (469-518)||(10455866-10455915)
chr3 (512-580)||(14747547-14747616)
chr3 (469-518)||(17005548-17005597)
chr3 (469-518)||(17276797-17276846)
chr3 (469-518)||(18427019-18427068)
chr3 (465-506)||(21478774-21478815)
chr3 (469-518)||(27277780-27277828)
chr3 (471-516)||(29508522-29508567)
chr3 (518-571)||(34910312-34910365)
chr3 (469-518)||(35223008-35223057)
[»] chr7 (55 HSPs)
chr7 (466-518)||(5409768-5409820)
chr7 (514-586)||(13770671-13770743)
chr7 (466-518)||(9778575-9778627)
chr7 (470-522)||(32287404-32287456)
chr7 (469-518)||(598278-598327)
chr7 (469-518)||(6490786-6490835)
chr7 (469-518)||(21864878-21864927)
chr7 (469-518)||(24105748-24105797)
chr7 (469-601)||(30813778-30813916)
chr7 (469-518)||(40131939-40131988)
chr7 (469-518)||(43027404-43027453)
chr7 (514-586)||(24105658-24105730)
chr7 (476-586)||(18215144-18215265)
chr7 (464-502)||(23128598-23128636)
chr7 (514-580)||(24339628-24339694)
chr7 (469-515)||(24339726-24339772)
chr7 (469-518)||(1433529-1433578)
chr7 (514-579)||(7438693-7438758)
chr7 (469-518)||(14729773-14729822)
chr7 (515-580)||(25481888-25481953)
chr7 (469-586)||(27945021-27945137)
chr7 (469-571)||(28155565-28155673)
chr7 (469-518)||(29763129-29763178)
chr7 (469-518)||(38804489-38804538)
chr7 (469-517)||(21880223-21880271)
chr7 (469-513)||(38134335-38134379)
chr7 (473-517)||(40287306-40287350)
chr7 (514-586)||(43027476-43027548)
chr7 (514-592)||(9408341-9408420)
chr7 (469-512)||(18212973-18213016)
chr7 (468-518)||(15680879-15680929)
chr7 (469-518)||(32093954-32094004)
chr7 (468-518)||(35749957-35750007)
chr7 (467-505)||(35862034-35862072)
chr7 (472-513)||(8842282-8842323)
chr7 (470-507)||(11272531-11272568)
chr7 (469-518)||(17852070-17852119)
chr7 (469-518)||(21568561-21568610)
chr7 (514-586)||(11061083-11061155)
chr7 (474-518)||(13770766-13770810)
chr7 (514-558)||(21880160-21880204)
chr7 (514-558)||(26033468-26033512)
chr7 (514-586)||(43249973-43250045)
chr7 (474-518)||(43250074-43250118)
chr7 (470-517)||(20545185-20545232)
chr7 (514-580)||(5409843-5409909)
chr7 (514-580)||(21930615-21930680)
chr7 (469-507)||(23751980-23752018)
chr7 (587-633)||(24105629-24105675)
chr7 (469-507)||(28973881-28973919)
chr7 (469-507)||(29812598-29812636)
chr7 (468-517)||(1401094-1401143)
chr7 (477-518)||(3294252-3294293)
chr7 (469-506)||(3991395-3991432)
chr7 (469-518)||(7133212-7133261)
[»] chr8 (69 HSPs)
chr8 (468-523)||(8343032-8343087)
chr8 (468-518)||(8343397-8343447)
chr8 (469-518)||(36450694-36450743)
chr8 (467-571)||(27213542-27213646)
chr8 (466-518)||(29510230-29510282)
chr8 (466-515)||(4673351-4673400)
chr8 (481-566)||(8798805-8798890)
chr8 (469-518)||(22652057-22652106)
chr8 (469-513)||(13436910-13436954)
chr8 (464-508)||(25566910-25566954)
chr8 (469-580)||(30077351-30077460)
chr8 (516-580)||(30271300-30271364)
chr8 (514-601)||(24669399-24669485)
chr8 (469-515)||(15816058-15816104)
chr8 (469-511)||(16641909-16641951)
chr8 (515-589)||(36450762-36450836)
chr8 (468-518)||(38487156-38487206)
chr8 (517-586)||(4673435-4673504)
chr8 (469-514)||(17751730-17751775)
chr8 (469-514)||(17760717-17760762)
chr8 (481-518)||(22943301-22943338)
chr8 (466-518)||(5813662-5813714)
chr8 (514-586)||(18170489-18170561)
chr8 (514-586)||(18634057-18634129)
chr8 (514-586)||(20873049-20873121)
chr8 (514-586)||(22197749-22197821)
chr8 (515-579)||(22595981-22596045)
chr8 (514-586)||(22651956-22652028)
chr8 (514-586)||(29510311-29510383)
chr8 (514-565)||(25566842-25566893)
chr8 (514-565)||(41831947-41831998)
chr8 (471-518)||(44067597-44067644)
chr8 (469-503)||(11833935-11833969)
chr8 (467-517)||(13397622-13397672)
chr8 (468-518)||(30067967-30068017)
chr8 (514-571)||(4298893-4298950)
chr8 (465-518)||(22197667-22197720)
chr8 (469-518)||(24858086-24858135)
chr8 (469-518)||(29447525-29447574)
chr8 (517-578)||(31556985-31557045)
chr8 (469-518)||(39820499-39820547)
chr8 (469-518)||(40064032-40064081)
chr8 (514-558)||(4948660-4948704)
chr8 (514-586)||(8343296-8343368)
chr8 (469-517)||(11803341-11803389)
chr8 (471-511)||(16987990-16988030)
chr8 (470-518)||(29447040-29447088)
chr8 (471-518)||(926730-926777)
chr8 (474-517)||(14639735-14639778)
chr8 (469-504)||(18964274-18964309)
chr8 (471-518)||(20679337-20679384)
chr8 (470-517)||(24205749-24205796)
chr8 (515-579)||(24727760-24727826)
chr8 (469-504)||(31514938-31514973)
chr8 (467-518)||(40332261-40332312)
chr8 (514-585)||(44067497-44067568)
chr8 (515-569)||(7442842-7442896)
chr8 (469-515)||(7616768-7616814)
chr8 (469-515)||(11944749-11944795)
chr8 (467-517)||(13403177-13403227)
chr8 (514-580)||(13436971-13437037)
chr8 (514-580)||(15816136-15816202)
chr8 (467-517)||(18407790-18407840)
chr8 (514-580)||(25192354-25192420)
chr8 (474-512)||(31109463-31109501)
chr8 (473-518)||(12559044-12559089)
chr8 (469-518)||(14134769-14134818)
chr8 (469-518)||(24413499-24413548)
chr8 (469-518)||(34450961-34451010)
[»] scaffold0103 (2 HSPs)
scaffold0103 (515-589)||(51788-51862)
scaffold0103 (470-518)||(51893-51941)
[»] scaffold0019 (1 HSPs)
scaffold0019 (464-518)||(71806-71860)
[»] scaffold0018 (2 HSPs)
scaffold0018 (514-601)||(192256-192342)
scaffold0018 (514-586)||(178825-178898)
[»] scaffold0003 (2 HSPs)
scaffold0003 (465-518)||(236910-236963)
scaffold0003 (469-518)||(241675-241724)
[»] scaffold0793 (1 HSPs)
scaffold0793 (469-517)||(4821-4869)
[»] scaffold0652 (2 HSPs)
scaffold0652 (470-518)||(403-451)
scaffold0652 (514-580)||(469-535)
[»] scaffold0223 (1 HSPs)
scaffold0223 (514-586)||(20152-20224)
[»] scaffold0136 (2 HSPs)
scaffold0136 (514-586)||(3856-3928)
scaffold0136 (468-517)||(3777-3826)
[»] scaffold0004 (3 HSPs)
scaffold0004 (514-590)||(92783-92859)
scaffold0004 (470-517)||(92893-92940)
scaffold0004 (470-579)||(123612-123731)
[»] scaffold0722 (1 HSPs)
scaffold0722 (515-580)||(7040-7105)
[»] scaffold0128 (1 HSPs)
scaffold0128 (470-527)||(32765-32822)
[»] scaffold0475 (1 HSPs)
scaffold0475 (468-512)||(3384-3428)
[»] scaffold0085 (1 HSPs)
scaffold0085 (485-593)||(25971-26079)
[»] scaffold0053 (2 HSPs)
scaffold0053 (514-586)||(8778-8850)
scaffold0053 (469-518)||(8868-8917)
[»] scaffold0021 (1 HSPs)
scaffold0021 (514-586)||(130462-130534)
[»] scaffold0380 (1 HSPs)
scaffold0380 (467-518)||(8671-8722)
[»] scaffold0168 (2 HSPs)
scaffold0168 (465-504)||(21372-21411)
scaffold0168 (465-504)||(21243-21282)
[»] scaffold0050 (1 HSPs)
scaffold0050 (514-565)||(70279-70330)
[»] scaffold0512 (1 HSPs)
scaffold0512 (469-518)||(4976-5025)
[»] scaffold0450 (1 HSPs)
scaffold0450 (469-518)||(8564-8613)
[»] scaffold0086 (1 HSPs)
scaffold0086 (469-518)||(3009-3058)
[»] scaffold0066 (1 HSPs)
scaffold0066 (519-571)||(33375-33427)
[»] scaffold0007 (2 HSPs)
scaffold0007 (514-586)||(225275-225347)
scaffold0007 (471-518)||(225199-225246)
[»] scaffold0361 (2 HSPs)
scaffold0361 (516-571)||(14525-14580)
scaffold0361 (469-518)||(14597-14646)
[»] scaffold0246 (1 HSPs)
scaffold0246 (515-586)||(19556-19626)
[»] scaffold0227 (1 HSPs)
scaffold0227 (469-512)||(15047-15090)
[»] scaffold0171 (1 HSPs)
scaffold0171 (514-601)||(23386-23472)
[»] scaffold0057 (1 HSPs)
scaffold0057 (467-518)||(24107-24157)
[»] scaffold0025 (1 HSPs)
scaffold0025 (514-564)||(23771-23822)
[»] scaffold0009 (1 HSPs)
scaffold0009 (476-515)||(188473-188512)
[»] scaffold0020 (1 HSPs)
scaffold0020 (469-518)||(135263-135312)


Alignment Details
Target: chr1 (Bit Score: 563; Significance: 0; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 563; E-Value: 0
Query Start/End: Original strand, 18 - 710
Target Start/End: Original strand, 29143869 - 29144549
Alignment:
Q  18 caaacttgtcaaattttgcattgattcgtttttatggcatttgttttcaatacacgtgcatcattcctattgccatgataaaaccattgacaactatatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29143869 caaacttgtcaaattttgcattgattcgtttttatggcatttgtttccaatacacgtgcatcattcctattgccatgataaaaccattgacaactatatg 29143968  T
Q  118 aacaaccttaatttgttgatannnnnnnggtatgttatttatggttgaggtccccactacaaaccgagtgacaaagggatcttggatgttatactattaa 217  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29143969 aacaaccttaatttgttgatatttttttggtatgttatttatggttgaggtccccactacaaaccgagtgacaaagggatcttggatgttatactattaa 29144068  T
Q  218 atcactgttccaaacttgtttacactttattacatttaaattttctcaaatttgatatatagctttggcaaaatttaaacctttttatctactttaagtt 317  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29144069 atcactgttccaaacttttttacactttattacatttaaattttctcaaatttgatatatagctttggcaaaatttaaacctttttatctactctaagtt 29144168  T
Q  318 gaaacaaacacactaatgcaagtttccacttcactgtcaagtttcaacaccttatgtttctactatacccttaaatacctcactcaattattatttttct 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29144169 gaaacaaacacactaatgcaagtttccacttcactgtcaagtttcaacaccttatgtttctactatacccttaaatacctccctcaattattatttttct 29144268  T
Q  418 aattttcatgtccaaaacaaccaaacacatttataagcaatcagtgtcaacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  29144269 aattttcacgtccaaaacaaccaaacacatttataaccaatcggtgttgacctatgaagcacggacactcttcggattaggcgtgttccggtgtcggaca 29144368  T
Q  518 cttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgtgtcgtatctgtatccg 617  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||            ||||||||||||||||||| ||||    
T  29144369 cttgtaattacactgcattatctatttttttcaaattattagctgtgtcggcgtatcagtgtca------------gtgtccgtgtcgtatctgtgtccg 29144456  T
Q  618 tatccatgcttcataggtgtcaaccaagcttttattttgtactacttaggcagtagttttttcctctttatatcagaaccttctctctgtgct 710  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29144457 tatccatgcttcatagatgtcaaccaagcttttattttgtactacttaggcagtagttttttcctctttatatcagaaccttctctctgtgct 29144549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 469 - 586
Target Start/End: Original strand, 48450550 - 48450666
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    ||||||||||| ||||||||||||||||| ||||||| | |||| ||||||||||||||||||  ||||| | ||||||||||||||||| |||||||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgtcctg-tgtccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttgg 48450648  T
Q  569 cgtatcagtgtcagtgtc 586  Q
    ||| |||||||| |||||    
T  48450649 cgtgtcagtgtccgtgtc 48450666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 1486646 - 1486693
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 1486693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 466 - 580
Target Start/End: Original strand, 22881564 - 22881689
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcg-----------gacacttgtaattacactgcattatctaattttttcaaatt 554  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||           ||||||||||||||||||  ||||| | |||||||||||||    
T  22881564 aacctatgaagcacggacactcctcggattagacgtgtcccggtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaatt 22881663  T
Q  555 attaactgtgttggcgtatcagtgtc 580  Q
    ||||  ||||| ||||| ||||||||    
T  22881664 attagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 6612178 - 6612250
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| | ||||| ||| |||| |||||    
T  6612178 gacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtc 6612250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 467 - 518
Target Start/End: Complemental strand, 9828176 - 9828125
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9828176 acctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacac 9828125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 467 - 518
Target Start/End: Complemental strand, 40917881 - 40917830
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  40917881 acctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacac 40917830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 42359391 - 42359438
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 42359438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 589
Target Start/End: Original strand, 46348390 - 46348465
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 589  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| |||||| ||||| |||||||| ||||||||    
T  46348390 gacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 46348465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 467 - 556
Target Start/End: Complemental strand, 30359486 - 30359398
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattat 556  Q
    ||||||||||||| |||||||||| |||| ||||||||||| |||| |||||||| | |||||||  ||||| | |||||||||||||||    
T  30359486 acctatgaagcacggacactcctcagatttggcgtgtcccgttgtc-gacacttgcagttacactaaattatgtgattttttcaaattat 30359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 467 - 515
Target Start/End: Original strand, 21365990 - 21366038
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  21365990 acctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 464 - 512
Target Start/End: Complemental strand, 22947854 - 22947806
Alignment:
Q  464 tcaacctatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  22947854 tcaacctatgaagcacggacactcctcggattaggcgtgtccaggtgtc 22947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 467 - 518
Target Start/End: Original strand, 9690211 - 9690262
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  9690211 acctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacac 9690262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 16297223 - 16297270
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacac 16297270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 6427595 - 6427545
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||| || |||||||||||||||||||||||||||    
T  6427595 cctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacac 6427545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 22515827 - 22515873
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 22515873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 37598951 - 37598901
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  37598951 cctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacac 37598901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 468 - 518
Target Start/End: Original strand, 46940747 - 46940797
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  46940747 cctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacac 46940797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 576
Target Start/End: Complemental strand, 113350 - 113289
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcag 576  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| ||||    
T  113350 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 18190048 - 18190097
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  18190048 ctatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacac 18190097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 466 - 519
Target Start/End: Complemental strand, 42325681 - 42325628
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacact 519  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||| ||||||    
T  42325681 aacctatgaagcacagacactcctcgaattaggtgtgtcccgatgtccgacact 42325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 471 - 586
Target Start/End: Original strand, 398735 - 398844
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcg 570  Q
    ||||||||| |||||| ||  |||||||||||||||||      |||| | ||||||||||| ||||| | ||||||||||||||||| | |||| ||||    
T  398735 atgaagcacggacacttcttagattaggcgtgtcccgg------acacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcg 398828  T
Q  571 tatcagtgtcagtgtc 586  Q
    | |||||||| |||||    
T  398829 tgtcagtgtccgtgtc 398844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 5944413 - 5944365
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||  |||||||||||||||||||| |||||||||||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggaca 5944365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 518
Target Start/End: Complemental strand, 15765880 - 15765828
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||| ||||||| |||||||||||||||||| ||||| |||||    
T  15765880 aacctatgaagcacggacactcttcggattaggcgtgtcccagtgtcagacac 15765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 558
Target Start/End: Original strand, 18190115 - 18190159
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  18190115 gacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 601
Target Start/End: Original strand, 38078668 - 38078756
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgt 601  Q
    |||||||||||||||| || ||||| | ||||||||||||||||| |||||| | ||| |||||||  |||||| ||||| ||||||||    
T  38078668 gacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtccgtgtccgt 38078756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 41877477 - 41877549
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||  ||||| ||||||| ||||||||||| | |||| |||||| ||||||| |||||    
T  41877477 gacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtc 41877549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 47989627 - 47989579
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| ||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagaca 47989579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 467 - 518
Target Start/End: Original strand, 5898204 - 5898255
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||| ||||||    
T  5898204 acctataaagcacggacactcctcggattagacgtgtcccggtgttggacac 5898255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 467 - 518
Target Start/End: Original strand, 16164242 - 16164293
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| |||| |||||| ||||||||||||||||| ||||||||||||    
T  16164242 acctatgaaacacatacactcttcggattaggcgtgtcctggtgtcggacac 16164293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 21378630 - 21378579
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||| ||||||    
T  21378630 gacacttgtaattacactgaattatgtaattttttcaatttattagctgtgt 21378579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 469 - 512
Target Start/End: Original strand, 27965940 - 27965983
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    ||||||||||  ||||||||||||||||||||||||||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 40258874 - 40258921
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggaca 40258921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 40258940 - 40258991
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||| |||||    
T  40258940 gacacttgtaattacactgaattatgtgattttttcaaattattaattgtgt 40258991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 515
Target Start/End: Complemental strand, 16812675 - 16812629
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||||    
T  16812675 ctatgaagcacggacactcctcagattaggcgtgtcccggtttcgga 16812629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 18556385 - 18556431
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcgga 18556431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 508 - 570
Target Start/End: Complemental strand, 31015101 - 31015039
Alignment:
Q  508 gtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcg 570  Q
    ||||| ||||||||||||||||||| ||||| | ||||| ||||||||||| |||||| ||||    
T  31015101 gtgtccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcg 31015039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 34741966 - 34741917
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  34741966 cctatgaagcacggacactcttcggattaggcgtgtccc-gtgtcggacac 34741917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 113412 - 113363
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||  | ||||||||||||||||||||||||||||| ||||||    
T  113412 ctatgaagcatgggcactcctcggattaggcgtgtcccggtgttggacac 113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 1704935 - 1704984
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||  ||||||||| |||||||||||||| |||||||||||||    
T  1704935 ctatgaagcatggacactccttggattaggcgtgtctcggtgtcggacac 1704984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 517
Target Start/End: Complemental strand, 1815377 - 1815328
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||| ||| | |||||||| ||||||||||||||||||||||||||    
T  1815377 cctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggaca 1815328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 2218347 - 2218298
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||| ||||||||||||||  |||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacac 2218298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 601
Target Start/End: Original strand, 3490352 - 3490484
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtcggaca-----cttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    |||||| |||||| ||||||||||  |||||||  |||||||||     ||||||||||||||| || || || |||| ||||||||||| | |||| ||    
T  3490352 aagcacggacacttctcggattagatgtgtcccaatgtcggacacgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcgg 3490451  T
Q  569 cgtatcagtgtcagtgtcc-gtgtctgtgtccgt 601  Q
    ||| |||||||| |||||| |||||||| |||||    
T  3490452 cgtgtcagtgtc-gtgtccggtgtctgtatccgt 3490484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 8117169 - 8117120
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||| | |||||| |||||||||||||||||||||| ||||||||||    
T  8117169 ctatgaatcgcagacattcctcggattaggcgtgtcccgatgtcggacac 8117120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 18337448 - 18337399
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||||||| |||| |||||| |||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacac 18337399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 19562556 - 19562604
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  19562556 ctatgaagcac-gacactcctcggattaggtgtgtccctgtgtcggacac 19562604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 513
Target Start/End: Original strand, 31694638 - 31694683
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcg 513  Q
    |||||||||||| |||||||||| |||||||||||| |||||||||    
T  31694638 cctatgaagcacggacactcctcagattaggcgtgttccggtgtcg 31694683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 506
Target Start/End: Original strand, 35702542 - 35702579
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtccc 506  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  35702542 ctatgaagcacggacactcctcggattaggcgtgtccc 35702579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 46348323 - 46348372
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||| |||||||| ||||||||| |||||||||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacac 46348372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 1486716 - 1486788
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||| ||||||||||| ||||| | ||||||||||||||||| ||||||  |||| ||||| || |||||    
T  1486716 gacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtc 1486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 590
Target Start/End: Complemental strand, 1815309 - 1815233
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtg 590  Q
    ||||||||||||||||||| ||||| | ||||||| |||| ||||  ||||| ||||| |||||||| || ||||||    
T  1815309 gacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatccgtg 1815233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 5927347 - 5927419
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||| |  ||||| | ||||||||||||||||| | ||||| |||| |||||||| |||||    
T  5927347 gacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtc 5927419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 512
Target Start/End: Original strand, 7918153 - 7918197
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||    
T  7918153 cctatgaagcacggacactcctcggattaggtgtgtcctggtgtc 7918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 10233374 - 10233326
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| |||||||||| ||||||| |||||| ||||||||||||    
T  10233374 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 10233326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 589
Target Start/End: Original strand, 18556466 - 18556538
Alignment:
Q  517 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 589  Q
    ||||||||||||| |  ||||| | || |||||||||||||| |||||| ||||| |||||||| ||||||||    
T  18556466 acttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 18556538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 21032335 - 21032287
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||||||| ||||||||||| || || ||||||||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacac 21032287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 558
Target Start/End: Original strand, 24577193 - 24577237
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  24577193 gacacttgtaattacactgaattatgtgattttttcaaattatta 24577237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 515
Target Start/End: Complemental strand, 33203020 - 33202976
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||    
T  33203020 atgaagcacatatactcctcggattaggcgtgtcacggtgtcgga 33202976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 602
Target Start/End: Complemental strand, 36878505 - 36878425
Alignment:
Q  522 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgtg 602  Q
    ||||||||||| ||||| | ||||| ||||||||||| | |||| ||||| ||||||||  |||||||||| || ||||||    
T  36878505 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtgtccgtatccgtg 36878425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 513
Target Start/End: Complemental strand, 36878585 - 36878541
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcg 513  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  36878585 ctatgaagcacggacactcctgggattaggcgtgtccccgtgtcg 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 518
Target Start/End: Complemental strand, 40181984 - 40181941
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||    
T  40181984 aagcacag-cactcctcggattaggcgtgtcccggtgtaggacac 40181941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 47989549 - 47989478
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| | ||||||| |||||||| | ||||| ||||| |||||||| |||||    
T  47989549 gacacttgtaattacactgaattatgtgatttttttaaattatt-attgtgtcggcgtgtcagtgtctgtgtc 47989478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 512
Target Start/End: Original strand, 15449170 - 15449213
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||    
T  15449170 ctatgaagcacagacactccttggattaggcatgtctcggtgtc 15449213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 518
Target Start/End: Complemental strand, 17778670 - 17778623
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||  ||||| |||||||||||| ||||||||||||||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacac 17778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 557
Target Start/End: Complemental strand, 18337381 - 18337338
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattatt 557  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||    
T  18337381 gacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 22515894 - 22515945
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| ||||||    
T  22515894 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 22515945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 580
Target Start/End: Original strand, 31672905 - 31672968
Alignment:
Q  517 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    |||||||||||||||| ||||  | ||||||||||||||||| |||||| || || ||||||||    
T  31672905 acttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtc 31672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 585
Target Start/End: Original strand, 42359456 - 42359527
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgt 585  Q
    ||||||||||||||||||| ||| | | |||||||||||||||||  |||||  |||| |||||||| ||||    
T  42359456 gacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgt 42359527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 580
Target Start/End: Complemental strand, 9103664 - 9103626
Alignment:
Q  542 attttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  9103664 attttttcaaattattaactgtgtcggcgtgtcagtgtc 9103626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 586
Target Start/End: Original strand, 14359527 - 14359600
Alignment:
Q  512 cggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||||  ||||| | ||||| ||||||||||| |||||| ||||| || ||||| |||||    
T  14359527 cggacacttgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtc 14359600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 580
Target Start/End: Original strand, 22794093 - 22794151
Alignment:
Q  522 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||| ||||| | ||||||||||||||||| | |||||| ||| ||||||||    
T  22794093 taattacactgtattatgtcattttttcaaattattatccgtgttgacgtgtcagtgtc 22794151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 514
Target Start/End: Complemental strand, 6574096 - 6574051
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgg 514  Q
    ||||||||||| | ||||||| |||||||||||||||| |||||||    
T  6574096 ctatgaagcacggtcactccttggattaggcgtgtcccagtgtcgg 6574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 518
Target Start/End: Original strand, 6612112 - 6612149
Alignment:
Q  481 gacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacac 6612149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 15323287 - 15323238
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||| ||| |||||||||||||||||| ||||  |||||||||||||    
T  15323287 ctatgaaacactgacactcctcggattaggtgtgtttcggtgtcggacac 15323238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 518
Target Start/End: Original strand, 17831474 - 17831511
Alignment:
Q  481 gacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||  |||||||||||||||||||||||||||    
T  17831474 gacactcctaagattaggcgtgtcccggtgtcggacac 17831511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 571
Target Start/End: Original strand, 19058863 - 19058920
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 571  Q
    ||||||||||||||||||| ||||| | || |||| ||||||||| |||||| |||||    
T  19058863 gacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgt 19058920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 474 - 523
Target Start/End: Complemental strand, 26830701 - 26830652
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgta 523  Q
    |||||| |||||||||| |||||||||||||||||| ||| |||| ||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgta 26830652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 503
Target Start/End: Complemental strand, 28663715 - 28663682
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgt 503  Q
    |||||||||||||||||||||| |||||||||||    
T  28663715 tatgaagcacagacactcctcgaattaggcgtgt 28663682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 32461393 - 32461442
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||| || |||||||||||||||| ||||| |||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacac 32461442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 489 - 558
Target Start/End: Complemental strand, 34298513 - 34298444
Alignment:
Q  489 tcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||| ||||||| || |||||||||| || | ||||||||||| ||||| | ||||| |||||||||||    
T  34298513 tcggaataggcgtatctcggtgtcggatacgtataattacactgaattatgtgattttctcaaattatta 34298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 517
Target Start/End: Original strand, 40747706 - 40747755
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||| ||| |||||||||||||| ||||||| |||| |||||    
T  40747706 cctatgaagcacggacgctcctcggattaggggtgtccctgtgtgggaca 40747755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 43113053 - 43113004
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||| ||| || ||||||| ||||||||||||| |||||    
T  43113053 ctatgaagcacagactctcttcagattaggtgtgtcccggtgtcagacac 43113004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 517
Target Start/End: Original strand, 43492433 - 43492482
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||| |  ||| ||||||||||||||| |||||||||||||    
T  43492433 cctatgaagcacatatgctcttcggattaggcgtgtgccggtgtcggaca 43492482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 523
Target Start/End: Original strand, 45534131 - 45534184
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgta 523  Q
    ||||||||||| ||||||||||||| |||||||||||  |||| ||||| ||||    
T  45534131 tatgaagcacaaacactcctcggataaggcgtgtccctatgtcagacacatgta 45534184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 518
Target Start/End: Original strand, 48040418 - 48040463
Alignment:
Q  473 gaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||| ||||||||||  |||||||||||||| |||||||||||    
T  48040418 gaagcacggacactcctccaattaggcgtgtcccagtgtcggacac 48040463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 51410147 - 51410098
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||||||  | |||||| |||||||||||||| ||||||||||    
T  51410147 aacctatgaagcacgaatactccttggattaggcgtgtctcggtgtcgga 51410098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 52903365 - 52903316
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||| ||| || || ||||||||||||||||||||    
T  52903365 ctatgaagcacggacactcttcgaataagccgtgtcccggtgtcggacac 52903316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 3e-28; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 469 - 586
Target Start/End: Complemental strand, 14674368 - 14674249
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccgg--tgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgtt 566  Q
    |||||||||||||||||||||||||||||| ||||| |||  |||| ||||||||||||||||||  ||||| | ||||||||||||||||| ||||||     
T  14674368 ctatgaagcacagacactcctcggattaggtgtgtctcggcctgtccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 14674269  T
Q  567 ggcgtatcagtgtcagtgtc 586  Q
    ||||| |||||||| |||||    
T  14674268 ggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 514 - 602
Target Start/End: Original strand, 21576752 - 21576841
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgtg 602  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||  |||||| |||||||| ||||||    
T  21576752 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtccagtgtctgtatccgtg 21576841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 465 - 517
Target Start/End: Original strand, 38464309 - 38464361
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38464309 caacctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 477 - 558
Target Start/End: Original strand, 15405025 - 15405106
Alignment:
Q  477 cacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    |||||||||||||||||||| || ||||| | ||| ||||||||||||||||| || ||||| | |||||||||||||||||    
T  15405025 cacagacactcctcggattaagcatgtcctgatgttggacacttgtaattacattgaattatatgattttttcaaattatta 15405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 514 - 579
Target Start/End: Original strand, 24906308 - 24906373
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt 579  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||| |||||||    
T  24906308 gacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgt 24906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 466 - 579
Target Start/End: Complemental strand, 6247732 - 6247609
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccg----gtgtcggacac------ttgtaattacactgcattatctaattttttcaaatta 555  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    ||||| |||||      |||||||||||||| ||||| | ||||||||||||||    
T  6247732 aacctatgaagcacagacacttctcggattaggtgtgtcccgtgccgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 6247633  T
Q  556 ttaactgtgttggcgtatcagtgt 579  Q
    |||  ||||| ||||| |||||||    
T  6247632 ttagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 631
Target Start/End: Original strand, 21191063 - 21191181
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgt-ctgtgtccgtgt-cgtatctg 611  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||| | |||||||| |||| ||||| | ||||| |||| |||||  |    
T  21191063 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgt-cgtgtccggtgtcagtgtccgtattcg 21191161  T
Q  612 tatccgtatccatgcttcat 631  Q
    ||||||||||| ||||||||    
T  21191162 tatccgtatccgtgcttcat 21191181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 14873642 - 14873592
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  14873642 cctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacac 14873592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 17177030 - 17177096
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    |||||||||||||||| || ||| | | ||||||||||||||||| |||||||||||||||||||||    
T  17177030 gacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtc 17177096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 468 - 586
Target Start/End: Original strand, 6326252 - 6326376
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggac------acttgtaattacactgcattatctaattttttcaaattattaact 561  Q
    |||||||||||| |||||| |||| ||||||||||| |||||||| |||      |||||||||||||||| ||||| ||||||| |||||||| || |     
T  6326252 cctatgaagcacggacacttctcgaattaggcgtgttccggtgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaattactagcg 6326351  T
Q  562 gtgttggcgtatcagtgtcagtgtc 586  Q
     ||| ||||| |||||||| |||||    
T  6326352 atgtcggcgtgtcagtgtccgtgtc 6326376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 7677835 - 7677787
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggaca 7677787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 514 - 590
Target Start/End: Complemental strand, 39698593 - 39698517
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtg 590  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||  |||| |||||||| || ||||||    
T  39698593 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgtatccgtg 39698517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 21190998 - 21191045
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacac 21191045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 467 - 518
Target Start/End: Complemental strand, 43565002 - 43564951
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  43565002 acctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacac 43564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 580
Target Start/End: Complemental strand, 31084375 - 31084309
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    |||||||||||||||| || ||||| | ||||||||||||||||| |||||| ||||| ||||||||    
T  31084375 gacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 472 - 518
Target Start/End: Original strand, 39268541 - 39268587
Alignment:
Q  472 tgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 39268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 515
Target Start/End: Complemental strand, 39698671 - 39698625
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 39698625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 589
Target Start/End: Complemental strand, 43001851 - 43001777
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 589  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| | |||| | | | |||||||| ||||||||    
T  43001851 acacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtccgt 43001777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 598
Target Start/End: Original strand, 7997173 - 7997258
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtg-tcagtgtccgtgtctgtgtc 598  Q
    ||||||| ||||||||||| ||||| | ||||| ||||||||||| | |||||||||| |||||| || || ||||||||||||||    
T  7997173 gacacttataattacactgtattatatcattttctcaaattattatccgtgttggcgtgtcagtgttcggtatccgtgtctgtgtc 7997258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 518
Target Start/End: Complemental strand, 17088398 - 17088361
Alignment:
Q  481 gacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17088398 gacactcctcggattaggcgtgtcccggtgtcggacac 17088361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 21576685 - 21576734
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacac 21576734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 35017162 - 35017113
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtcccgatgttggacac 35017113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 514
Target Start/End: Complemental strand, 15086600 - 15086552
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgg 514  Q
    ||||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  15086600 aacctatgaagcaaagacactcctcggattaggcgtgttccgatgtcgg 15086552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 517
Target Start/End: Complemental strand, 15382592 - 15382556
Alignment:
Q  481 gacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||||||||||||||||||||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggaca 15382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 17123166 - 17123119
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtccc-gtgtcggaca 17123119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 21522802 - 21522730
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||| |||||||||||||| ||||| | ||||||| ||||||||| |||||| ||||| |||||||| |||||    
T  21522802 gacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtc 21522730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 21533368 - 21533296
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||| |||||||||||||| ||||| | ||||||| ||||||||| |||||| ||||| |||||||| |||||    
T  21533368 gacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtc 21533296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 469 - 602
Target Start/End: Complemental strand, 8420122 - 8419990
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    ||||||||||| || |||||||| |||||||| ||||  |   | |||||||||||||||| || ||||| | ||||||||||||||||| || ||| ||    
T  8420122 ctatgaagcacggatactcctcgaattaggcgcgtcc--gacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcgg 8420025  T
Q  569 cgtatcagtgt-cagtgtccgtgtctgtgtccgtg 602  Q
    ||| ||| ||| | ||||||||||| || ||||||    
T  8420024 cgtgtcattgtccggtgtccgtgtccgtatccgtg 8419990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 585
Target Start/End: Complemental strand, 19579753 - 19579682
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgt 585  Q
    ||||||||||||| ||||  ||||| | ||||| ||||||||||| |||||| |||||||||||||| ||||    
T  19579753 gacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 466 - 517
Target Start/End: Complemental strand, 39342564 - 39342513
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||| ||||    
T  39342564 aacctatgaagtagagacactccttggattaggcgtgtcccggtgtctgaca 39342513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 42893412 - 42893361
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||    
T  42893412 gacacttgtaattacactggattatgtgattttttcaaattattagctgtgt 42893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 27932355 - 27932305
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||| |||||    
T  27932355 cctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacac 27932305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 518
Target Start/End: Original strand, 39695950 - 39695999
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  39695950 cctatgaagcaccgacactcctaggattaggcgtgtccc-gtgtcggacac 39695999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 2419986 - 2419937
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||| |||||||||| ||||||||| |||||||||    
T  2419986 ctatgaagcacggacactcatcggattaggtgtgtcccggggtcggacac 2419937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 2437030 - 2436981
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||||||    
T  2437030 ctatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggacac 2436981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 505
Target Start/End: Complemental strand, 10298670 - 10298633
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcc 505  Q
    |||||||||||| |||||||||||||||||||||||||    
T  10298670 cctatgaagcacggacactcctcggattaggcgtgtcc 10298633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 17593663 - 17593712
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||| || |||||||||||||||| |||||||||||||| ||||||    
T  17593663 ctatgaagtacggacactcctcggattaagcgtgtcccggtgttggacac 17593712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 518
Target Start/End: Complemental strand, 30183675 - 30183630
Alignment:
Q  473 gaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||    
T  30183675 gaagcacagacacttctcgaattaggcgtgtcccagtgtcggacac 30183630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 31084447 - 31084398
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||| ||| ||||||||||||||||||| |||||| |||||||||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacac 31084398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 504
Target Start/End: Complemental strand, 2548504 - 2548464
Alignment:
Q  464 tcaacctatgaagcacagacactcctcggattaggcgtgtc 504  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  2548504 tcaatctatgaagcacagacactcctcggattaggtgtgtc 2548464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 13287406 - 13287478
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||| |||||||| ||||| | ||||||||||||||||| |||||| | ||| | |||||| |||||    
T  13287406 gacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtc 13287478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 513
Target Start/End: Complemental strand, 15884096 - 15884052
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcg 513  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||    
T  15884096 ctatgaaacacagacactcctcggattaggcgtgttccagtgtcg 15884052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 511
Target Start/End: Original strand, 16203746 - 16203786
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgt 511  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  16203746 atgaagcacagacactcctcggattaagcgtgtaccggtgt 16203786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 586
Target Start/End: Original strand, 19552578 - 19552622
Alignment:
Q  542 attttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||    
T  19552578 attttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtc 19552622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 21194063 - 21194111
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||| |||||| |||||||||||||||||||||| ||||||||| ||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgaca 21194111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 505
Target Start/End: Original strand, 22423764 - 22423800
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcc 505  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtcc 22423800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 504
Target Start/End: Complemental strand, 36838655 - 36838615
Alignment:
Q  464 tcaacctatgaagcacagacactcctcggattaggcgtgtc 504  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  36838655 tcaatctatgaagcacagacactccttggattaggcgtgtc 36838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 516
Target Start/End: Original strand, 37328774 - 37328822
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggac 516  Q
    |||||||||||| |||||||||||||||| |||| ||||||| ||||||    
T  37328774 cctatgaagcacggacactcctcggattaagcgtatcccggtatcggac 37328822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 511
Target Start/End: Complemental strand, 43001922 - 43001882
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgt 511  Q
    ||||||||| ||||||||||||||||||||||||| |||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgt 43001882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 15410375 - 15410430
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgt 522  Q
    |||||| ||||||  ||||||||||| |||| ||||||||||||| ||||||||||    
T  15410375 acctattaagcacgaacactcctcggcttagacgtgtcccggtgttggacacttgt 15410430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 23015926 - 23015973
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||| | ||||||||||||||||||||||||||  ||||||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacac 23015973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 41633787 - 41633736
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    |||| |||||||||||||| ||||| ||| ||||||||||||||| ||||||    
T  41633787 gacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgt 41633736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 503
Target Start/End: Complemental strand, 6770659 - 6770621
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgt 503  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  6770659 caacctatgaagcacggacactcttcggattaggcgtgt 6770621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 505
Target Start/End: Original strand, 11596396 - 11596434
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcc 505  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  11596396 acctatgaagcacaaatactcctcggattaggcgtgtcc 11596434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 518
Target Start/End: Original strand, 17393304 - 17393354
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||  ||| ||||||||||| | |||||||||||||||||||    
T  17393304 cctatgaagcacgaacattcctcggattacgagtgtcccggtgtcggacac 17393354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 586
Target Start/End: Original strand, 36642799 - 36642841
Alignment:
Q  544 tttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||||||||| ||||| |||||||| |||||    
T  36642799 tttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtc 36642841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 506
Target Start/End: Complemental strand, 4105374 - 4105341
Alignment:
Q  473 gaagcacagacactcctcggattaggcgtgtccc 506  Q
    ||||||| ||||||||||||||||||||||||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtccc 4105341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 508
Target Start/End: Complemental strand, 6035592 - 6035559
Alignment:
Q  475 agcacagacactcctcggattaggcgtgtcccgg 508  Q
    |||||||||||||||| |||||||||||||||||    
T  6035592 agcacagacactcctcagattaggcgtgtcccgg 6035559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 514
Target Start/End: Original strand, 16304366 - 16304411
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgg 514  Q
    ||||||||||| |||| |||||||||||| |||||| |||||||||    
T  16304366 ctatgaagcacggacattcctcggattagacgtgtctcggtgtcgg 16304411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 504
Target Start/End: Original strand, 18421779 - 18421812
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtc 504  Q
    ||||||||||||||||||||||||||| ||||||    
T  18421779 atgaagcacagacactcctcggattagacgtgtc 18421812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 19429546 - 19429497
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||||| || ||||||| |||| ||||||||| |||||    
T  19429546 ctatgaagcacagacacttcttggattagacgtgacccggtgtcagacac 19429497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 511
Target Start/End: Complemental strand, 19579818 - 19579789
Alignment:
Q  482 acactcctcggattaggcgtgtcccggtgt 511  Q
    ||||||||||||||||||||||||||||||    
T  19579818 acactcctcggattaggcgtgtcccggtgt 19579789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 21522880 - 21522831
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| |||| ||||||| | |||||||||||||||||||| |||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacac 21522831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 21533446 - 21533397
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| |||| ||||||| | |||||||||||||||||||| |||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacac 21533397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 30098456 - 30098407
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||| ||||||||||||| |||||| |||||| |||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacac 30098407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 32766872 - 32766921
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||| |||||| ||| ||| ||||||||||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacac 32766921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 42893479 - 42893430
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||  ||||||||||  ||||||||||||| ||||||||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacac 42893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 5e-21; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 468 - 596
Target Start/End: Complemental strand, 30299049 - 30298916
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgt----cggacacttgtaattacactgcattatctaatttttt-caaattattaactg 562  Q
    |||||||||||| ||||||||||||||||| ||||||||||       | ||||||||||||||||||| ||||| | ||||||| |||||||||| |||    
T  30299049 cctatgaagcacggacactcctcggattagacgtgtcccggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctg 30298950  T
Q  563 tgttggcgtatcagtgtcagtgtccgtgtctgtg 596  Q
    ||| ||||| |||||||| |||||||| ||||||    
T  30298949 tgtcggcgtgtcagtgtccgtgtccgtatctgtg 30298916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 468 - 596
Target Start/End: Complemental strand, 30327917 - 30327784
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgt----cggacacttgtaattacactgcattatctaatttttt-caaattattaactg 562  Q
    |||||||||||| ||||||||||||||||| ||||||||||       | ||||||||||||||||||| ||||| | ||||||| |||||||||| |||    
T  30327917 cctatgaagcacggacactcctcggattagacgtgtcccggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctg 30327818  T
Q  563 tgttggcgtatcagtgtcagtgtccgtgtctgtg 596  Q
    ||| ||||| |||||||| |||||||| ||||||    
T  30327817 tgtcggcgtgtcagtgtccgtgtccgtatctgtg 30327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 515 - 596
Target Start/End: Original strand, 11596360 - 11596442
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc-agtgtccgtgtctgtg 596  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| || ||||||||||||||||||  |||||||||||||||    
T  11596360 acacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtctggtgtccgtgtctgtg 11596442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 471 - 603
Target Start/End: Original strand, 22440559 - 22440695
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcgga-----cacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||     ||| | ||||||||||| ||||| | ||||| ||||||||||||| ||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacgtcacatataattacactgaattatgtgattttctcaaattattaacggtgt 22440658  T
Q  566 tggcgtatcagtgtcagtgtccgtgtctgtgtccgtgt 603  Q
     |  |||||||||||  ||| ||||||||| |||||||    
T  22440659 cgatgtatcagtgtccatgt-cgtgtctgtatccgtgt 22440695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 23292926 - 23292975
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 23292975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 517
Target Start/End: Complemental strand, 16184952 - 16184902
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  16184952 acctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggaca 16184902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 53381526 - 53381576
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  53381526 caacctatgaagcacggacactcctcggattaggtgtgtcccggtgtcgga 53381576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 715545 - 715593
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 752871 - 752919
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 466 - 518
Target Start/End: Original strand, 18513172 - 18513224
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  18513172 aacctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 21945555 - 21945483
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||| | |||||||| |||||    
T  21945555 gacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtc 21945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 517
Target Start/End: Original strand, 11596295 - 11596345
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||||    
T  11596295 acctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 517
Target Start/End: Complemental strand, 17876287 - 17876237
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||||    
T  17876287 acctatgaagcacagacactccttggattaggtgtgtcctggtgtcggaca 17876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 472 - 518
Target Start/End: Complemental strand, 28084640 - 28084594
Alignment:
Q  472 tgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 28084594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 34306811 - 34306876
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    |||||||||||||||||| |||||||| | |||||||||||||||  ||||| ||||||||||||||    
T  34306811 gacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcggcgtatcagtgtc 34306876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 24343632 - 24343583
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacac 24343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 3947702 - 3947750
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacac 3947750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 508
Target Start/End: Original strand, 5775303 - 5775343
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccgg 508  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  5775303 cctatgaagcacggacactcctcggattaggcgtgtcccgg 5775343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 17425348 - 17425396
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  17425348 tatgaagcacagacactcctcggattaggcgtgtccttgtgtctgacac 17425396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 23292993 - 23293065
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||| |||| ||||| | ||||||||||||||||| |||||| ||||| ||| |||| |||||    
T  23292993 gacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtc 23293065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 29205587 - 29205539
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggaca 29205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 30982808 - 30982856
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacac 30982856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 558
Target Start/End: Complemental strand, 37203371 - 37203272
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgg----------acacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||          |||||||||||||||||  ||||| | |||||||||||||||||    
T  37203371 ctatgaagcacggacacttctcggattagacgtgtcccggtgtcggacccgacactacacttgtaattacactaaattatgtcattttttcaaattatta 37203272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 512
Target Start/End: Complemental strand, 40784073 - 40784029
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||||||||| |||||||||||||||||| |||||||||||||    
T  40784073 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 466 - 517
Target Start/End: Original strand, 3064865 - 3064916
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||||| |||||||||||||||||||||||| | | ||||||||    
T  3064865 aacctatgaagcacggacactcctcggattaggcgtgtctcagagtcggaca 3064916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 5922532 - 5922579
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgtcggaca 5922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 467 - 518
Target Start/End: Complemental strand, 19482800 - 19482749
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||  ||||||||||||||||| ||||||| |||||||||||    
T  19482800 acctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacac 19482749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 469 - 512
Target Start/End: Complemental strand, 36635449 - 36635406
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtc 36635406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 518
Target Start/End: Original strand, 944601 - 944651
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| |||| ||||||| ||||||| |||||||||||||||||||    
T  944601 cctatgaagctcagagactcctcagattaggtgtgtcccggtgtcggacac 944651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 12895214 - 12895260
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcgga 12895260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 28964188 - 28964234
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcgga 28964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 568
Target Start/End: Complemental strand, 29205496 - 29205442
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| | |||||||    
T  29205496 gacacttgtaattacactgaattatgtgattttttcaaattattagccgtgttgg 29205442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 30094133 - 30094083
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| ||||| ||||||| |||||||||||||||||||||||| |||||    
T  30094133 cctatgtagcacggacactcttcggattaggcgtgtcccggtgtccgacac 30094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 565
Target Start/End: Complemental strand, 51701309 - 51701259
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||||    
T  51701309 acacttgtaattacactcaattatgtaattttttcaaattattagctgtgt 51701259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 470 - 519
Target Start/End: Complemental strand, 40965389 - 40965340
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacact 519  Q
    |||||||||| |||||||||| |||||||||||||  |||||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggacact 40965340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 42640643 - 42640594
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| || |||||||||||||||||||||| |||| |||||||    
T  42640643 ctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacac 42640594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 2361982 - 2362054
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||| ||||||||||  ||||| ||||||||||||||||||| |||||| || || ||| ||||| ||||    
T  2361982 gacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtcaatgtc 2362054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 518
Target Start/End: Original strand, 3712458 - 3712502
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacac 3712502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 8423658 - 8423706
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||| |||| |||||| ||| ||||||||||||||||||||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggaca 8423706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 586
Target Start/End: Original strand, 12628620 - 12628664
Alignment:
Q  542 attttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||    
T  12628620 attttttcaaattattaactgtgtcggcatgtcagtgtcagtgtc 12628664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 18575984 - 18576032
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||| ||| ||||||||||||||||| ||||||||    
T  18575984 tatgaagcacatacactcatcgaattaggcgtgtcccggtttcggacac 18576032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 517
Target Start/End: Complemental strand, 21945618 - 21945574
Alignment:
Q  473 gaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||    
T  21945618 gaagcatagacactcctcggattaggcgtgttgcggtgtcggaca 21945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 558
Target Start/End: Original strand, 28964255 - 28964299
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  28964255 gacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 466 - 518
Target Start/End: Complemental strand, 35161158 - 35161106
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||| ||||||  |||||||||| |||| ||||||||||||||    
T  35161158 aacctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacac 35161106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 47264116 - 47264068
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  47264116 ctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagaca 47264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 3947773 - 3947824
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||| |||||   ||||||||||||||||| ||||||    
T  3947773 gacacttgtaattacactgaattatgcgattttttcaaattattagctgtgt 3947824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 505
Target Start/End: Complemental strand, 4383484 - 4383449
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcc 505  Q
    |||||||||| |||||||||||||||||||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtgtcc 4383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 466 - 517
Target Start/End: Original strand, 7214463 - 7214514
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||||| ||| || ||||||||||| | |||||||||||||||    
T  7214463 aacctatgaagcacaaacaatcatcggattaggcatttcccggtgtcggaca 7214514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 586
Target Start/End: Complemental strand, 19482719 - 19482648
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||| | ||||| | || ||||||||||||||  ||||| ||||| |||||||| |||||    
T  19482719 acacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 19482648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 518
Target Start/End: Original strand, 24613628 - 24613679
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||| ||||||||| ||||||| ||||||| |||||| |||||    
T  24613628 acctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacac 24613679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 538
Target Start/End: Complemental strand, 28470484 - 28470422
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattat 538  Q
    ||||||||||| ||||||||||||||||||| ||||||       |||||||||||||||| ||||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtccc-------gacacttgtaattacaatgcattat 28470422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 38847019 - 38847070
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||| || || | ||||||||||||||||| ||||||    
T  38847019 gacacttgtaattacactgaataatatgattttttcaaattattagctgtgt 38847070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 586
Target Start/End: Complemental strand, 40481687 - 40481617
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||||| ||||| | |||||| ||||||||||  ||| | ||||| ||||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtgtcagtgtc 40481617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 518
Target Start/End: Original strand, 2625954 - 2626008
Alignment:
Q  464 tcaacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||| || |||||| | ||||||||||||| | ||||||||||    
T  2625954 tcaacctatgaagcacggatactccttgaattaggcgtgtcctgatgtcggacac 2626008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 4157266 - 4157220
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||||||||||| |||||| || || ||||||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggaca 4157220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 4157553 - 4157507
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||| |||||||||||| ||||||||| || ||||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggaca 4157507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 596
Target Start/End: Original strand, 12895123 - 12895204
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtg 596  Q
    |||||||||||||||  || ||||| | ||||||||||||||||| |||| | ||||| || ||||| |||||||| ||||||    
T  12895123 gacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgtgtccgtatctgtg 12895204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 520 - 597
Target Start/End: Original strand, 14465088 - 14465166
Alignment:
Q  520 tgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgt 597  Q
    |||||||||| || ||||| | |||||||||||||||||  |||||| | || |||||||| |||||| ||||||||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgttagagtgtcagtgtctgtgtccggtgtctgtgt 14465166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 517
Target Start/End: Complemental strand, 16073515 - 16073465
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||  ||||||||||||||||||||||||   ||||||||||    
T  16073515 acctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggaca 16073465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 16303273 - 16303339
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||||||||||  ||||| | ||||||||||| ||||| || ||| ||||| ||||||||    
T  16303273 gacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtc 16303339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 21873309 - 21873351
Alignment:
Q  476 gcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||    
T  21873309 gcacaaacactccttggattagacgtgtcccggtgtcggacac 21873351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 21929170 - 21929212
Alignment:
Q  476 gcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||    
T  21929170 gcacaaacactccttggattagacgtgtcccggtgtcggacac 21929212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 604
Target Start/End: Original strand, 27706185 - 27706274
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtct-gtgtccgtgtc 604  Q
    |||||||||||||||||  ||||| | ||||||| |||||||||| ||||| | ||| ||||||||  ||| ||||||| |||||||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgt-cgtgtctggtgtccgtgtc 27706274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 40224434 - 40224484
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    |||||||||||||||| | |||||||||||||| ||||||||  |||||||    
T  40224434 caacctatgaagcacacatactcctcggattagacgtgtcccaatgtcgga 40224484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 559
Target Start/End: Original strand, 6485618 - 6485663
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaa 559  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||    
T  6485618 gacacttgtaattacactaaattatgtgattttttcaaattattaa 6485663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 12884347 - 12884396
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||||||||| |||| |||| ||||| ||||    
T  12884347 ctatgaagcacggacactcctcggattagacgtgccccgatgtcgaacac 12884396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 514
Target Start/End: Original strand, 12895055 - 12895100
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgg 514  Q
    ||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  12895055 ctatgaagcacggacactcttcgaattaggcgtatcccggtgtcgg 12895100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 18966628 - 18966579
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||  |||||||||| ||||| ||||||||||    
T  18966628 ctatgaagcacggacactccttagattaggcgtatcccgttgtcggacac 18966579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 518
Target Start/End: Complemental strand, 32910670 - 32910633
Alignment:
Q  481 gacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  32910670 gacactcctcggattaggcgtgtcatggtgtcggacac 32910633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 34306744 - 34306793
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||  ||| ||||| ||||||||||||| |||||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacac 34306793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 602
Target Start/End: Complemental strand, 49431078 - 49430990
Alignment:
Q  514 gacacttgtaattacactgcattatctaatttttt-caaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgtg 602  Q
    ||||||| ||||||||||| ||||| | ||||||| |||||||||| |||||| ||||| ||| |||| | || |||||| |||||||||    
T  49431078 gacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagt-cgtgtccgtgtccgtg 49430990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 518
Target Start/End: Complemental strand, 49431133 - 49431096
Alignment:
Q  481 gacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  49431133 gacactcctcggataaggcgtgtcccggtgttggacac 49431096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 586
Target Start/End: Complemental strand, 46776 - 46662
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    ||||||||||| ||||||||||||||||||||||||   |   | |||| |||||||||||||| ||||| | |||||||||||||||||||||||| ||    
T  46776 ctatgaagcacggacactcctcggattaggcgtgtc---gacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgg 46680  T
Q  569 cgtatcagtgtcagtgtc 586  Q
    ||| ||| |||| |||||    
T  46679 cgtgtcattgtccgtgtc 46662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 2e-20; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 468 - 586
Target Start/End: Original strand, 426477 - 426593
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttg 567  Q
    |||||||||||| |||||||||| ||||||||||||||  |   | |||||||||||||||| |  ||||| | |||||||||||||||||||||||| |    
T  426477 cctatgaagcacggacactcctcagattaggcgtgtcc--gacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcg 426574  T
Q  568 gcgtatcagtgtcagtgtc 586  Q
    |||| |||||||| |||||    
T  426575 gcgtgtcagtgtccgtgtc 426593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 514 - 601
Target Start/End: Complemental strand, 12696376 - 12696290
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 601  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||| |||||||| |||| |||||| ||||||||    
T  12696376 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt-cgtgtccgtgtccgt 12696290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 469 - 580
Target Start/End: Complemental strand, 7938219 - 7938102
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgg------acacttgtaattacactgcattatctaattttttcaaattattaactg 562  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||      |||||| ||||||||||  ||||| | ||||||||||||||||| |||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctg 7938120  T
Q  563 tgttggcgtatcagtgtc 580  Q
    ||| ||||| ||||||||    
T  7938119 tgtcggcgtgtcagtgtc 7938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 470 - 578
Target Start/End: Original strand, 17341622 - 17341735
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccgg-----tgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtg 564  Q
    ||||||||||| |||||||||||||||||||||||| ||     |||| ||||||| ||||||||||| ||||| | ||||| ||||||||||||| |||    
T  17341622 tatgaagcacaaacactcctcggattaggcgtgtcctggtattatgtctgacacttataattacactgaattatgtgattttatcaaattattaacggtg 17341721  T
Q  565 ttggcgtatcagtg 578  Q
    | ||||| ||||||    
T  17341722 tcggcgtgtcagtg 17341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 579
Target Start/End: Complemental strand, 31959268 - 31959146
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac-------------ttgtaattacactgcattatctaattttttcaaattat 556  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||             |||||||||||||||||||| | |||||||||||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcgccgacacttgtaattacactgcattatgtgattttttcaaattat 31959169  T
Q  557 taactgtgttggcgtatcagtgt 579  Q
    || |||||  ||||| |||||||    
T  31959168 tagctgtgacggcgtgtcagtgt 31959146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 7977837 - 7977900
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagt 577  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||| |||||    
T  7977837 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 518
Target Start/End: Original strand, 8776903 - 8776957
Alignment:
Q  464 tcaacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  8776903 tcaacctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacac 8776957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 10770681 - 10770747
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||  ||||||||||| ||||||||    
T  10770681 gacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtc 10770747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 580
Target Start/End: Complemental strand, 16766749 - 16766683
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| ||||||||    
T  16766749 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 16766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 465 - 518
Target Start/End: Original strand, 8365444 - 8365497
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  8365444 caacctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacac 8365497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 589
Target Start/End: Original strand, 17841598 - 17841671
Alignment:
Q  516 cacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 589  Q
    ||||||||||||||||  ||||| | ||||||||||||||||| |||||| ||||| |||||||| ||||||||    
T  17841598 cacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 17841671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 516
Target Start/End: Complemental strand, 3209518 - 3209471
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggac 516  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggac 3209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 467 - 518
Target Start/End: Original strand, 17327588 - 17327639
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  17327588 acctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacac 17327639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 515 - 586
Target Start/End: Complemental strand, 17435250 - 17435179
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||| || ||| | |||||||||||| |||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtc 17435179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 463 - 518
Target Start/End: Complemental strand, 34595259 - 34595204
Alignment:
Q  463 gtcaacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  34595259 gtcaatctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacac 34595204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 472 - 518
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  472 tgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 472 - 518
Target Start/End: Original strand, 9025448 - 9025494
Alignment:
Q  472 tgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 517
Target Start/End: Original strand, 10339052 - 10339102
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  10339052 acctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 10339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 7248488 - 7248439
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacac 7248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 9027286 - 9027237
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  9027286 ctatgaagcacaaacactccttggattagccgtgtcccggtgtcggacac 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 9107299 - 9107348
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacac 9107348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 16766827 - 16766778
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacac 16766778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 512
Target Start/End: Original strand, 26178620 - 26178661
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  26178620 atgaagcacagacactcctccgattaggcgtgtcccggtgtc 26178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 28152217 - 28152168
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacac 28152168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 9107377 - 9107449
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||| | | ||||||||||||||||| |||||| ||||| | |||||| |||||    
T  9107377 gacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 9107449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 16833360 - 16833288
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| | ||| | |||||||||||||||||  ||||| ||||| |||||||| |||||    
T  16833360 gacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 16833288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 17841530 - 17841578
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacac 17841578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 482 - 573
Target Start/End: Complemental strand, 25207846 - 25207757
Alignment:
Q  482 acactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtat 573  Q
    |||||||||  |||||||||||||||||||||||||||  |||||| |||| ||||  ||| ||| ||||||||||| | |||| |||||||    
T  25207846 acactcctcatattaggcgtgtcccggtgtcggacact--taattatactgaattacgtaactttctcaaattattagcggtgtcggcgtat 25207757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 31385048 - 31385000
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacac 31385000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 32839571 - 32839611
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggt 509  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  32839571 ctatgaagcacagacacttctcggattaggcgtgtcccggt 32839611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 34595186 - 34595114
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||  ||||| ||||| ||| |||| |||||    
T  34595186 gacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtc 34595114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 602
Target Start/End: Original strand, 1191707 - 1191796
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttg--gcgtatcagtgtcagtgtccgtgtctgtgtccgtg 602  Q
    ||||||||||||||||||| ||| | | | ||||||||||||||| |||||| |  |||| || ||||||||||||||||| |||||||||    
T  1191707 gacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcggcgcgtgtccgtgtcagtgtccgtgtc-gtgtccgtg 1191796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 519 - 601
Target Start/End: Original strand, 5970120 - 5970202
Alignment:
Q  519 ttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgt 601  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||| | ||| || |||||| ||||| ||||| ||||||||    
T  5970120 ttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtca-tgtccggtgtccgtgtccgt 5970202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 561
Target Start/End: Original strand, 6327525 - 6327572
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaact 561  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  6327525 gacacttgtaattacacttaattatataattttttcaaattattaact 6327572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 515 - 586
Target Start/End: Original strand, 8776981 - 8777052
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||||| ||| | | |||||||||||||||||  ||||| ||||| |||||||| |||||    
T  8776981 acacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 8777052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 519 - 601
Target Start/End: Original strand, 31429015 - 31429097
Alignment:
Q  519 ttgtaattacactgcattatctaattttttc-aaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 601  Q
    |||||||||||||| ||||| | |||||||  ||||||||| ||| || ||||| |||||||||||||||||||||| ||||||    
T  31429015 ttgtaattacactgaattatgtgattttttttaaattattagctgggt-ggcgtgtcagtgtcagtgtccgtgtctgggtccgt 31429097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 467 - 505
Target Start/End: Complemental strand, 4878063 - 4878025
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcc 505  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  4878063 acctatgaagcacggacactcctcggattaggcgtgtcc 4878025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 515
Target Start/End: Complemental strand, 8714110 - 8714064
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||||    
T  8714110 ctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcgga 8714064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 13360299 - 13360361
Alignment:
Q  455 caatcagtgtcaacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||| || | ||||||||||| ||||||| |||||||||||||||| | ||||||||||    
T  13360299 caatcagtttcgaactatgaagcacggacactcttcggattaggcgtgtctcagtgtcggaca 13360361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 571
Target Start/End: Original strand, 7801132 - 7801220
Alignment:
Q  482 acactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 571  Q
    |||||| |||||||||||||||||||    || |||||||||||||| ||| ||||| | |||||||||||||||||  ||||| |||||    
T  7801132 acactcttcggattaggcgtgtcccgacaccg-acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgt 7801220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 24645600 - 24645551
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||| ||||||||| ||||||  ||||||||||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacac 24645551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 587
Target Start/End: Complemental strand, 28152150 - 28152078
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc 587  Q
    ||||||||||||||||||| ||||| | |||||| |||||||||| || ||| ||||| |||||||| ||||||    
T  28152150 gacacttgtaattacactgaattatgtgattttt-caaattattagctttgtcggcgtgtcagtgtccgtgtcc 28152078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 472 - 517
Target Start/End: Original strand, 32978842 - 32978887
Alignment:
Q  472 tgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggaca 32978887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 8365526 - 8365598
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||| | ||||| | || ||||||||||||||  ||||| ||||| |||||||| |||||    
T  8365526 gacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 8365598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 517
Target Start/End: Original strand, 12868612 - 12868664
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||||| ||||||  ||||||||||||||| || ||||||||||    
T  12868612 caacctatgaagcaccgacacttatcggattaggcgtgttcccgtgtcggaca 12868664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 16833428 - 16833380
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggac 516  Q
    ||||||||| |||||||||||||||||| || |||||| ||||||||||    
T  16833428 cctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggac 16833380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 18367970 - 18367918
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||||| ||||||||| |||| ||||||||||| ||||| ||||    
T  18367970 caacctatgaagcacggacactccttggataaggcgtgtccccgtgtcagaca 18367918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 23771630 - 23771559
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||| |||||||||||||| | ||| ||||||||| |||||||||||||||| ||||| || ||||| |||||    
T  23771630 gacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgtccgtgtccgtgtc 23771559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 558
Target Start/End: Complemental strand, 28715347 - 28715303
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  28715347 gacacttgtaattacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 558
Target Start/End: Complemental strand, 31384972 - 31384928
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  31384972 gacacttgtaattacactgaattatgtgattttttcaaattatta 31384928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 518
Target Start/End: Complemental strand, 12696446 - 12696399
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||| |||| ||| ||||||||||||| |||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacac 12696399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 466 - 513
Target Start/End: Original strand, 15489658 - 15489705
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcg 513  Q
    |||||||  ||||||||||||||||||||||||||| |||| ||||||    
T  15489658 aacctatttagcacagacactcctcggattaggcgtatcccagtgtcg 15489705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 518
Target Start/End: Complemental strand, 28715416 - 28715365
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||  ||||| |||| ||||||||||||||||||||| ||||    
T  28715416 acctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacac 28715365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 5970037 - 5970083
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    |||||||||| || ||||||||||||| ||||||||||| |||||||    
T  5970037 ctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcgga 5970083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 580
Target Start/End: Original strand, 7265608 - 7265666
Alignment:
Q  522 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||| ||||| | ||||| ||||||||||| | |||||||||| ||||||||    
T  7265608 taattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 515
Target Start/End: Complemental strand, 7378098 - 7378052
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||| |||||| ||| |||||| |||||||||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcgga 7378052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 568
Target Start/End: Original strand, 7569183 - 7569229
Alignment:
Q  522 taattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    ||||||||||| ||||| ||||||| ||||||||||| |||||||||    
T  7569183 taattacactgaattatgtaattttctcaaattattatctgtgttgg 7569229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 503
Target Start/End: Original strand, 7723199 - 7723233
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgt 503  Q
    ||||||||||| |||||||||||||||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 506
Target Start/End: Original strand, 8805523 - 8805561
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtccc 506  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  8805523 cctatgaagcacggacactcctcggattaggcatgtccc 8805561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 505
Target Start/End: Complemental strand, 10649409 - 10649371
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcc 505  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  10649409 acctatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 580
Target Start/End: Original strand, 12868710 - 12868748
Alignment:
Q  542 attttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  12868710 attttttcaaattattaactgtgtcggcgtgtcagtgtc 12868748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 517
Target Start/End: Original strand, 13364643 - 13364693
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  13364643 acctatgaagcacagacactcgtcggaatagacgtgtcctggtgtcagaca 13364693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 518
Target Start/End: Original strand, 21924902 - 21924940
Alignment:
Q  480 agacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  21924902 agacgctcctcggattaggcgtgtcccggtgtccgacac 21924940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 571
Target Start/End: Complemental strand, 1681810 - 1681753
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 571  Q
    ||||||||||||||||||| ||||  | |||||||||||||||||  ||||| |||||    
T  1681810 gacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgt 1681753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 586
Target Start/End: Complemental strand, 3398667 - 3398599
Alignment:
Q  517 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||| ||||||||||| ||||| | |||||| |||||||||| |||||| ||||| |||||||| |||||    
T  3398667 acttataattacactgaattatatgattttt-caaattattagctgtgtcggcgtgtcagtgtccgtgtc 3398599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 4388199 - 4388150
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||||| ||||||| ||||||||||  ||||| |||||    
T  4388199 ctatgaagcacagacacttctcggataaggcgtgtcctcgtgtcagacac 4388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 580
Target Start/End: Original strand, 6349745 - 6349810
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    |||| |||||||||| || ||||| |||||||||||||||||||| | ||| ||| ||||| ||||    
T  6349745 acacatgtaattacaatgaattatgtaattttttcaaattattaattatgtcggcatatcaatgtc 6349810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 6665331 - 6665282
Alignment:
Q  470 tatgaagcaca-gacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||| |||||||||||| |||||| |||||||||||    
T  6665331 tatgaagcacaagacacttctcggattaggcatgtccccgtgtcggacac 6665282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 7625235 - 7625186
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||  |||||||| |||||| |||||| ||||||||||||||    
T  7625235 ctatgaagcacgaacactccttggattaagcgtgttccggtgtcggacac 7625186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 9629513 - 9629464
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||  ||||||||||||||||| |||||| | |||||||||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacac 9629464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 10770607 - 10770656
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||| |||||||| ||||||||  ||||||||    
T  10770607 ctatgaagcacggacactcctcagattaggcatgtcccggcatcggacac 10770656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 510
Target Start/End: Complemental strand, 12236782 - 12236737
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtg 510  Q
    |||||||||||||||  ||||||||| | |||||||||||||||||    
T  12236782 caacctatgaagcacgaacactcctcaggttaggcgtgtcccggtg 12236737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 514
Target Start/End: Original strand, 34073278 - 34073323
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgg 514  Q
    ||||||||||| ||||||||||| |||||  |||||||||||||||    
T  34073278 ctatgaagcacggacactcctcgaattagaggtgtcccggtgtcgg 34073323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 589
Target Start/End: Complemental strand, 39323357 - 39323241
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    ||||||||||| |||||||||| |||||||| ||||| ||||    |||||||||||||||||| ||||| ||||||| ||||||||||| | |||| |     
T  39323357 ctatgaagcacggacactcctcagattaggcctgtccaggtg----acacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcga 39323262  T
Q  569 cgtatcagtgtcagtgtccgt 589  Q
    ||| |||||||| ||||||||    
T  39323261 cgtttcagtgtccgtgtccgt 39323241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 465 - 518
Target Start/End: Complemental strand, 37419877 - 37419824
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37419877 caacctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 37419824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 514 - 601
Target Start/End: Original strand, 21374706 - 21374794
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgt 601  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||| | |||||| |||||| ||||| ||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtccgtgtccgt 21374794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 469 - 590
Target Start/End: Original strand, 34221463 - 34221580
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    ||||||||||| || ||||||||||||||||||||||||    | ||||||||||||| ||  | ||||| || |||||||||||||||| |||||| ||    
T  34221463 ctatgaagcacggaaactcctcggattaggcgtgtcccg----ccgacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgtcgg 34221558  T
Q  569 cgtatcagtgtcagtgtccgtg 590  Q
    | ||||||| || |||||||||    
T  34221559 catatcagtatccgtgtccgtg 34221580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 15972925 - 15972853
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||| ||||| ||||| |||||||| |||||    
T  15972925 gacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtc 15972853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 30404857 - 30404929
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||| |||| ||||| |||||||| |||||    
T  30404857 gacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtc 30404929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 2438661 - 2438707
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggaca 2438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 469 - 603
Target Start/End: Original strand, 12940898 - 12941030
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    ||||||||||||||||||||||  ||||    |||||| |||||| ||| |||||||||||||| ||||| | |||||||||||||||||  |||||       
T  12940898 ctatgaagcacagacactcctcatattatatatgtccctgtgtcg-acatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaa 12940996  T
Q  569 cgtatcagtgtcagtgtccgtgtctgtgtccgtgt 603  Q
    ||| |||||||| |||| ||||||||| |||||||    
T  12940997 cgtgtcagtgtccgtgt-cgtgtctgtatccgtgt 12941030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 20539630 - 20539753
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccg----gtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactg 562  Q
    ||||||||||||| |||||||||||||| ||||||||| ||    |   | ||||||||||||||||||  ||||| | ||||||||||||||||| |||    
T  20539630 acctatgaagcacggacactcctcggatcaggcgtgtctcgccacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctg 20539729  T
Q  563 tgttggcgtatcagtgtcagtgtc 586  Q
    ||| | ||| |||||||| |||||    
T  20539730 tgtcgacgtgtcagtgtccgtgtc 20539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 26769641 - 26769592
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 26769592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 38117099 - 38117148
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacac 38117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 18840953 - 18841001
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 18841001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 468 - 586
Target Start/End: Original strand, 19536360 - 19536477
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatct-aattttttcaaattattaactgtgtt 566  Q
    |||||||||||  |||||||||||||||||||||||||  |   | ||||||||||||||||||| ||||| | | ||||||||||||||||  |||||     
T  19536360 cctatgaagcatggacactcctcggattaggcgtgtcc--gacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtc 19536457  T
Q  567 ggcgtatcagtgtcagtgtc 586  Q
    ||||| ||| |||| |||||    
T  19536458 ggcgtgtcattgtccgtgtc 19536477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 514 - 589
Target Start/End: Complemental strand, 37559029 - 37558954
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 589  Q
    |||||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||| |||||||| ||||||||    
T  37559029 gacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 37558954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 21624319 - 21624246
Alignment:
Q  514 gacacttgtaattacactgcattat-ctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| ||| |||||| ||||||||| |||||| ||||| |||||||| |||||    
T  21624319 gacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtc 21624246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 510
Target Start/End: Original strand, 22084756 - 22084797
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtg 510  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  22084756 ctatgaagcacagacactcatcggattaggcgtgtcccggtg 22084797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 37559096 - 37559047
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacac 37559047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 41843565 - 41843516
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  41843565 ctatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacac 41843516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 42511322 - 42511371
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacac 42511371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 6940307 - 6940235
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||  ||||| ||| ||||| ||||||||| |||||| ||||| |||||||| |||||    
T  6940307 gacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtc 6940235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 11223793 - 11223841
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca 11223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 18422015 - 18421943
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| | || |||| |||||||||| ||||| ||||| |||||||| |||||    
T  18422015 gacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtc 18421943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 518
Target Start/End: Original strand, 37411181 - 37411233
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| ||||||||| ||||||||||| |||||||||||| |||||||||||    
T  37411181 aacctacgaagcacaggcactcctcggactaggcgtgtcccagtgtcggacac 37411233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 471 - 518
Target Start/End: Complemental strand, 19942382 - 19942335
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||  |||||||||||||||||||||||||||||||| |||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacac 19942335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 474 - 517
Target Start/End: Original strand, 23058389 - 23058432
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||| |||||| ||||||||||||||||||||||||||||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcggaca 23058432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 18841020 - 18841086
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||  |||||  |||| ||||||||    
T  18841020 gacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtc 18841086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 592
Target Start/End: Complemental strand, 28677953 - 28677883
Alignment:
Q  522 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtc 592  Q
    ||||||||||| ||||| | ||||||||||||||||| | |||| |||||  ||||||||||||| |||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgttccagtgtcagtgtcagtgtc 28677883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 29367283 - 29367337
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgta 523  Q
    |||||||||||| ||| |||||||||||||| |||| ||||||||||||| ||||    
T  29367283 ctatgaagcacaaacattcctcggattaggcatgtctcggtgtcggacacatgta 29367337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 592
Target Start/End: Original strand, 30527610 - 30527680
Alignment:
Q  522 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtc 592  Q
    ||||||||||  ||||| | ||||| ||||||||||||| |||| || || ||||||||||||||||||||    
T  30527610 taattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgtcagtgtccgtgtc 30527680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 36756275 - 36756321
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggaca 36756321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 558
Target Start/End: Original strand, 42832234 - 42832327
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcg------gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||  ||||||||| |||||||||||||||||| ||||      ||||||| ||||||||||| | ||| ||||||| |||||||||||    
T  42832234 atgaagcaaggacactccttggattaggcgtgtcccggagtcggacaccgacacttataattacactgaaatatgtaattttctcaaattatta 42832327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 10535685 - 10535734
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||  |||||||||||||||||||||||| |||||| |||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 12748786 - 12748737
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||  ||||||| |||||||||||| |||||    
T  12748786 ctatgaagcacagacactcctcaaattaggcatgtcccggtgtccgacac 12748737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 517
Target Start/End: Complemental strand, 18622722 - 18622673
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||| |||||||||||||||| | |||||||||||| |||||    
T  18622722 cctatgaagcacggacactcctcggattaagtgtgtcccggtgtaggaca 18622673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 23058449 - 23058522
Alignment:
Q  514 gacacttgtaattacactgcattatctaatttt-ttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| | ||||| ||||||||||||| ||||| ||||| ||| |||| |||||    
T  23058449 gacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtc 23058522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 27084388 - 27084339
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| ||||||||||| ||||||||||||| |||||| ||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacac 27084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 580
Target Start/End: Original strand, 38117167 - 38117232
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    |||||||||||||||| | | ||| | ||||||||||||||||| |||||| ||||| ||||||||    
T  38117167 acacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 518
Target Start/End: Complemental strand, 12224337 - 12224293
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||    
T  12224337 aagcacaaacactccttggattaggcgtgtcccagtgtcggacac 12224293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 586
Target Start/End: Original strand, 16069269 - 16069333
Alignment:
Q  522 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||| ||||| | ||||||| ||||||||||| |||| ||||| |||||||| |||||    
T  16069269 taattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 28596587 - 28596539
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| |||||||||||||||||| ||||||  |||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacac 28596539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 558
Target Start/End: Original strand, 30717537 - 30717581
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  30717537 gacacttgtaattacactgaattatgtgattttttcaaattatta 30717581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 34784911 - 34784959
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||||||||||||| || ||||||||||| ||||| ||||    
T  34784911 ctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagaca 34784959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 590
Target Start/End: Original strand, 34994015 - 34994059
Alignment:
Q  546 tttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtg 590  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||    
T  34994015 tttcaaattattagcggtgttggcgtatcagtgtccgtgtccgtg 34994059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 513
Target Start/End: Complemental strand, 44635612 - 44635568
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcg 513  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||    
T  44635612 ctatgaagcacggacactcctcagattaggcgtgtctcggtgtcg 44635568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 44860449 - 44860401
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| ||||||||||| |||||| |||||||| ||||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacac 44860401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 568
Target Start/End: Original strand, 1886892 - 1886939
Alignment:
Q  521 gtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    ||||||||| || ||||| ||| |||||||||||||||||||||||||    
T  1886892 gtaattacattgaattatgtaaatttttcaaattattaactgtgttgg 1886939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 2438726 - 2438777
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||| ||||| | ||||||| ||||||||| ||||||    
T  2438726 gacacttgtaattacactgaattatgtgattttttgaaattattagctgtgt 2438777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 11223870 - 11223921
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||| ||||| | ||||||||||| ||||| ||||||    
T  11223870 gacacttgtaattacactgaattatgttattttttcaaaatattagctgtgt 11223921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 518
Target Start/End: Complemental strand, 15657992 - 15657945
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||  ||||||||||||| |||||||||||||| |||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacac 15657945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 504
Target Start/End: Original strand, 18420363 - 18420398
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtc 504  Q
    |||||||||||||||||| |||||||||||||||||    
T  18420363 ctatgaagcacagacacttctcggattaggcgtgtc 18420398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 589
Target Start/End: Original strand, 19580316 - 19580363
Alignment:
Q  542 attttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 589  Q
    |||||||||||||||||||||||  || ||||||||||| ||||||||    
T  19580316 attttttcaaattattaactgtgacggtgtatcagtgtccgtgtccgt 19580363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 604
Target Start/End: Complemental strand, 28412394 - 28412312
Alignment:
Q  522 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtct-gtgtccgtgtc 604  Q
    ||||||||||| ||||| | ||||| ||||||||||||| |||||| ||| | |||||| |||| ||||||| |||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgt-cgtgtctggtgtccgtgtc 28412312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 512
Target Start/End: Original strand, 3444827 - 3444869
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||||||| ||||||||||||||||||| |||||| |||||    
T  3444827 tatgaagcacggacactcctcggattaggcatgtcccagtgtc 3444869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 15907851 - 15907897
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||| ||||||| || |||| |||||||||||||||||||    
T  15907851 ctatgaagcacggacactcatcagattgggcgtgtcccggtgtcgga 15907897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 15972993 - 15972943
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| |||| || |||||||||| ||||||||| |||||||||    
T  15972993 cctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacac 15972943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 472 - 518
Target Start/End: Complemental strand, 17776714 - 17776668
Alignment:
Q  472 tgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||| ||||||||||||||||||| |||||||  |||||||||    
T  17776714 tgaagcacggacactcctcggattaggcctgtcccgaggtcggacac 17776668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 518
Target Start/End: Original strand, 20242666 - 20242716
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||||||| |||||| ||||||||||  ||||| |||||    
T  20242666 cctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacac 20242716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 522
Target Start/End: Complemental strand, 28678034 - 28677980
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgt 522  Q
    ||||||||||| ||||||||||| | | || |||||||| |||||||||||||||    
T  28678034 cctatgaagcatagacactcctccggtcagccgtgtccctgtgtcggacacttgt 28677980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 32321383 - 32321341
Alignment:
Q  473 gaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    |||||||| | |||||| |||||||||||||||||||||||||    
T  32321383 gaagcacaaatactccttggattaggcgtgtcccggtgtcgga 32321341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 518
Target Start/End: Original strand, 34993921 - 34993971
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||  |||||||| | |||||||||||||| |||||||||||    
T  34993921 cctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacac 34993971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 518
Target Start/End: Original strand, 14996171 - 14996208
Alignment:
Q  481 gacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacac 14996208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 14996230 - 14996303
Alignment:
Q  514 gacacttgtaattacactgcattatctaatttt-ttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||  ||||| | ||||| |||||||||||| |||||| ||| | |||||||| |||||    
T  14996230 gacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtc 14996303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 15909570 - 15909619
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||  |||||| ||| |||||||||||||| |||||||||||    
T  15909570 ctatgaagcacgaacactcttcgaattaggcgtgtccctgtgtcggacac 15909619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 18631351 - 18631400
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| | ||||||||||| |||||||||||||| ||||| |||||    
T  18631351 ctatgaagctcggacactcctcgcattaggcgtgtcccagtgtctgacac 18631400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 21782744 - 21782793
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||| | |||||| ||||||||||||| ||||||    
T  21782744 ctatgaagcacggacactccacagattagacgtgtcccggtgttggacac 21782793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 507
Target Start/End: Original strand, 23354582 - 23354619
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccg 507  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  23354582 tatgaaccacggacactcctcggattaggcgtgtcccg 23354619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 24009414 - 24009365
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||| |||| ||||||||||| ||||| |||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 24009365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 28412476 - 28412427
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||| ||||||| ||||| |||||||| |||||||||||    
T  28412476 ctatgaagcactgacgctcctcgaattagccgtgtcccagtgtcggacac 28412427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 30717459 - 30717508
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||| ||||||||||| |||| |||||| ||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacac 30717508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 518
Target Start/End: Original strand, 34006926 - 34006979
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||| ||||||||| | |||||| |||| |||||||| |||||    
T  34006926 caacctatgaagcacggacactccttgaattaggtgtgttccggtgtcagacac 34006979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 35056998 - 35056949
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||| ||||||||||||  | |||||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacac 35056949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 595
Target Start/End: Complemental strand, 37986803 - 37986751
Alignment:
Q  542 attttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgt 595  Q
    ||||||||||||||||| |||||| ||||| |||||||| ||||||| ||||||    
T  37986803 attttttcaaattattatctgtgtcggcgtgtcagtgtc-gtgtccgagtctgt 37986751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 8e-20; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 514 - 602
Target Start/End: Complemental strand, 25775561 - 25775471
Alignment:
Q  514 gacacttgtaattacactgcattatctaatt-ttttcaaattattaactgtgttggcgtatcagtgt-cagtgtccgtgtctgtgtccgtg 602  Q
    ||||||||||||||||||| ||||| | ||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||||    
T  25775561 gacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtccagtgtccgtgtctgtctccgtg 25775471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 34185052 - 34185101
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 466 - 518
Target Start/End: Complemental strand, 40052434 - 40052382
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  40052434 aacctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacac 40052382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 10268493 - 10268559
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||||||||||  ||||| | |||||||||||||||||||||||| ||||| ||||||||    
T  10268493 gacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 10268559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 571
Target Start/End: Complemental strand, 14979271 - 14979176
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||          |||||||||| ||||| | ||||||||||||||||| ||||||    
T  14979271 aacctatgaagcacggacactcctcgggttaggcgtgtcccggtgtc----------aattacactgaattatgtgattttttcaaattattagctgtgt 14979182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 517
Target Start/End: Original strand, 40993273 - 40993323
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  40993273 acctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggaca 40993323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 27505370 - 27505321
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacac 27505321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 55401194 - 55401145
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacac 55401145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 3610685 - 3610613
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||| ||||||||||||  |||| | ||||||| |||||||||||||||||||||| |||||||| |||||    
T  3610685 gacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtc 3610613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 515 - 579
Target Start/End: Original strand, 4987299 - 4987363
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt 579  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| |||||||    
T  4987299 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 558
Target Start/End: Complemental strand, 12084002 - 12083911
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgt--cggacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    |||||||||||||||||||||| ||||||||  |||| |||||  | ||||||||||||||||||| ||||| || |||| |||| ||||||    
T  12084002 ctatgaagcacagacactcctcagattaggcacgtccaggtgtcactgacacttgtaattacactgaattatgtagttttctcaatttatta 12083911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 15796301 - 15796373
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||| |||||||||||||| ||||| | |||||||||||||||||||||||| ||||| ||| |||| |||||    
T  15796301 gacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtc 15796373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 20503584 - 20503536
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagaca 20503536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 473 - 565
Target Start/End: Original strand, 21256952 - 21257044
Alignment:
Q  473 gaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||| |||||||||||||||||| ||||||  |   | |||||||||||||| |||| ||||| | ||||||||||||||||| ||||||    
T  21256952 gaagcacggacactcctcggattaggtgtgtccacgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgt 21257044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 55401127 - 55401055
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||  ||||| | |||||||||||||||||  ||||| |||||||||||||| |||||    
T  55401127 gacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtc 55401055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 4987222 - 4987269
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacac 4987269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 577
Target Start/End: Complemental strand, 11610628 - 11610510
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcg----------gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||          ||||||||||| ||||||| ||||| | ||||||| |||||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacgacttgacacttgtaactacactgaattatgtgatttttttaaattatta 11610529  T
Q  559 actgtgttggcgtatcagt 577  Q
     | |||||||||| |||||    
T  11610528 gcggtgttggcgtgtcagt 11610510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 466 - 517
Target Start/End: Complemental strand, 28812648 - 28812597
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  28812648 aacctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggaca 28812597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 467 - 518
Target Start/End: Original strand, 41961577 - 41961628
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  41961577 acctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacac 41961628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 11252095 - 11252046
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||||||||||||||| ||| || |||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacac 11252046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 21211413 - 21211364
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  21211413 ctatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacac 21211364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 8039764 - 8039812
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  8039764 ctatgaagcacagatactcttcggattaagcgtgtcccggtgtcggaca 8039812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 603
Target Start/End: Complemental strand, 11658916 - 11658779
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcg---gacacttgtaattacactgcattatctaattttttcaaattattaactgtg 564  Q
    ||||||||| |  ||||||||||| ||||| |||||||||||||||   ||||| | |||| |||||| |||||   ||||| |||||||||||||  ||    
T  11658916 cctatgaagtatggacactcctcgaattagacgtgtcccggtgtcgatcgacacatataatcacactgaattatgcgattttctcaaattattaacgatg 11658817  T
Q  565 ttggcgtatcagtgtcagtgtccgtgtctgtgtccgtgt 603  Q
    |||| || |||||||| |||| |||||| ||||| ||||    
T  11658816 ttggtgtgtcagtgtctgtgt-cgtgtccgtgtctgtgt 11658779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 600
Target Start/End: Complemental strand, 14216946 - 14216859
Alignment:
Q  512 cggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccg 600  Q
    ||||||||||||||||||||| ||||| | || |||| |||||||||  ||||| | ||| |||||||| |||| ||||||||||||||    
T  14216946 cggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgt-cgtgtctgtgtccg 14216859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 600
Target Start/End: Complemental strand, 14223075 - 14222988
Alignment:
Q  512 cggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccg 600  Q
    ||||||||||||||||||||| ||||| | || |||| |||||||||  ||||| | ||| |||||||| |||| ||||||||||||||    
T  14223075 cggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgt-cgtgtctgtgtccg 14222988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 15999951 - 15999999
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacac 15999999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 601
Target Start/End: Complemental strand, 21479170 - 21479083
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgt 601  Q
    |||||| |||||||||||| ||| | | ||||||||||||||||| |||||| ||||| |||||||| |||||| ||||| ||||||||    
T  21479170 gacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc-gtgtccggtgtccgtgtccgt 21479083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 28918053 - 28917981
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| || ||| ||||| ||||| || |||||    
T  28918053 gacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtc 28917981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 467 - 515
Target Start/End: Original strand, 49651714 - 49651762
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  49651714 acctatgaagcacggacacttctcggattaggtgtgtcccggtgtcgga 49651762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 518
Target Start/End: Complemental strand, 52369909 - 52369857
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||| ||||||    
T  52369909 aacctatgaagcacggacactcctcggaataggtgtgtcccggtgttggacac 52369857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 8789489 - 8789536
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgaca 8789536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 589
Target Start/End: Complemental strand, 20503517 - 20503443
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 589  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||   ||||| ||||| |||||||| ||||||||    
T  20503517 gacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc-gtgtccgt 20503443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 24204983 - 24205030
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacac 24205030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 471 - 518
Target Start/End: Complemental strand, 25775624 - 25775577
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacac 25775577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 26508162 - 26508111
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||    
T  26508162 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 26508111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 7171621 - 7171571
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| | |||||||| |||||||||||||| |||||||||||||    
T  7171621 cctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacac 7171571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 588
Target Start/End: Complemental strand, 10955004 - 10954930
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccg 588  Q
    ||||||||| ||||||||| ||||| | |||||||||||||||||  ||||| ||||| |||||||  |||||||    
T  10955004 gacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtccg 10954930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 512
Target Start/End: Complemental strand, 34910435 - 34910393
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  34910435 tatgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 592
Target Start/End: Complemental strand, 55213015 - 55212937
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtc 592  Q
    ||||||||||||| ||||  ||||| | ||||||| |||||||||||||||| ||| ||||| |||| ||||| |||||    
T  55213015 gacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcggcatatcactgtctgtgtcagtgtc 55212937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 1509681 - 1509636
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtcggacact 519  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||    
T  1509681 aagcacggacactcctccgattaggcgtgtaccggtgtcggacact 1509636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 3163971 - 3164020
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||  ||||||||||| |||||||||||| |||||||||||||    
T  3163971 ctatgaagcatggacactcctcgaattaggcgtgtctcggtgtcggacac 3164020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 21720883 - 21720842
Alignment:
Q  477 cacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  21720883 cacagacactcatcggattagacgtgtcccggtgtcggacac 21720842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 25074914 - 25074865
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||  ||||||||||||||||| ||||||| |||||||||||    
T  25074914 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacac 25074865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 586
Target Start/End: Original strand, 26492215 - 26492284
Alignment:
Q  517 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||| ||| | | ||||||||||||||||| || ||| ||||| |||||||| |||||    
T  26492215 acttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtc 26492284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 1389956 - 1389908
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| ||||||||| ||||||||| ||||| ||||||||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacac 1389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 505
Target Start/End: Original strand, 4990912 - 4990948
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcc 505  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtgtcc 4990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 8587028 - 8587100
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||  ||||| | |||||||||||||| ||  ||||| ||||| |||||||| |||||    
T  8587028 gacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtc 8587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 592
Target Start/End: Original strand, 10318071 - 10318119
Alignment:
Q  544 tttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtc 592  Q
    ||||||||||||||| |||||| ||||| |||||||| |||||||||||    
T  10318071 tttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtgtc 10318119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 24205048 - 24205120
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||| ||||||||||| ||||| | ||||| ||||||||||| | |||| ||||| |||||||| |||||    
T  24205048 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtc 24205120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 35312106 - 35312034
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| |||  |||| |||||||||| ||||| | | |||||||||| |||||    
T  35312106 gacacttgtaattacactgaattatgtaacatttttaaattattaaatgtgtcgacatatcagtgtccgtgtc 35312034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 1509591 - 1509540
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| ||||||    
T  1509591 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 1509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 504
Target Start/End: Complemental strand, 8842448 - 8842413
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtc 504  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgtc 8842413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 518
Target Start/End: Complemental strand, 28918120 - 28918073
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||  ||||||||| |||||||||||||||| |||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacac 28918073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 512
Target Start/End: Original strand, 46191283 - 46191326
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||||||||| | ||| |||||||||||||||||||||||||    
T  46191283 ctatgaagcacaaatacttctcggattaggcgtgtcccggtgtc 46191326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 51206360 - 51206411
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    |||||||||| |||||||| ||||| | ||||||||||||||||| ||||||    
T  51206360 gacacttgtatttacactgaattatgtgattttttcaaattattagctgtgt 51206411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 518
Target Start/End: Complemental strand, 10955056 - 10955022
Alignment:
Q  484 actcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||| |||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacac 10955022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 472 - 518
Target Start/End: Complemental strand, 12100385 - 12100339
Alignment:
Q  472 tgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||    
T  12100385 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 12100339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 588
Target Start/End: Complemental strand, 14209165 - 14209092
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccg 588  Q
    ||||||||||||||||||| ||||| | ||||||| |||||||||  ||||| ||||| || ||||| |||||||    
T  14209165 gacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc-gtgtctgtgtccg 14209092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 518
Target Start/End: Complemental strand, 1509641 - 1509604
Alignment:
Q  481 gacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  1509641 gacactcctccgattaggcgtgtaccggtgtcggacac 1509604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 2408590 - 2408639
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| || ||||||  |||||||||||||||||||||| ||||    
T  2408590 ctatgaagcacggagactccttagattaggcgtgtcccggtgtcgaacac 2408639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 517
Target Start/End: Complemental strand, 3631796 - 3631755
Alignment:
Q  476 gcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||| ||||||||||||| ||||||||||| |||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggaca 3631755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 510
Target Start/End: Original strand, 3730108 - 3730149
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtg 510  Q
    ||||||||||  |||||||||||||||||| |||||||||||    
T  3730108 ctatgaagcatggacactcctcggattaggtgtgtcccggtg 3730149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 4466540 - 4466589
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||| || || |||||||| |||||||||||    
T  4466540 ctatgaagcacggacactcctcgaataagccgtgtcccagtgtcggacac 4466589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 571
Target Start/End: Original strand, 8039850 - 8039899
Alignment:
Q  522 taattacactgcattatctaattttttcaaattattaactgtgttggcgt 571  Q
    ||||||||||| ||||| ||||||| ||||||||||| | ||||||||||    
T  8039850 taattacactgaattatataattttctcaaattattagcggtgttggcgt 8039899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 8071014 - 8071063
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| ||||| |||||| | ||||||||||||||| ||||||||||||    
T  8071014 ctatgaggcacatacactctttggattaggcgtgtcctggtgtcggacac 8071063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 10455915 - 10455866
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| |||||||| ||||||  |||||||| |||||||||||    
T  10455915 ctatgaagcacatacactccttggattaaacgtgtcccagtgtcggacac 10455866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 580
Target Start/End: Complemental strand, 14747616 - 14747547
Alignment:
Q  512 cggacacttgtaattacactgcattatctaatttttt-caaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||| ||||||||||||||  ||||| | ||||||| |||||||||| |||||| ||||| ||||||||    
T  14747616 cggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 17005548 - 17005597
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||||||||||||  |||||| |||||| |||||    
T  17005548 ctatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacac 17005597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 17276846 - 17276797
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||| ||||||||||| | ||| |||||||||||||    
T  17276846 ctatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacac 17276797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 18427068 - 18427019
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||| ||| |||||||||| ||||||| ||||||||||| |||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacac 18427019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 506
Target Start/End: Complemental strand, 21478815 - 21478774
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtccc 506  Q
    |||||||||||||||| |  ||||||||||||||||||||||    
T  21478815 caacctatgaagcacaaatgctcctcggattaggcgtgtccc 21478774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 27277780 - 27277828
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| |||||||||||||||| | |||||| |||||||||||    
T  27277780 ctatgaagcacatacactcctcggattagacatgtccc-gtgtcggacac 27277828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 516
Target Start/End: Complemental strand, 29508567 - 29508522
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggac 516  Q
    ||||||||| |||||| || ||||||| ||||||||||||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggac 29508522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 571
Target Start/End: Complemental strand, 34910365 - 34910312
Alignment:
Q  518 cttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 571  Q
    ||||||||||||||| ||||| | |||||||||||||||||  ||||| |||||    
T  34910365 cttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgt 34910312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 35223057 - 35223008
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||||||| | ||||||||| ||||| |||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacac 35223008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 466 - 518
Target Start/End: Original strand, 5409768 - 5409820
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5409768 aacctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 5409820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 13770743 - 13770671
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||| |||||| |||||||||||||| |||||    
T  13770743 gacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtc 13770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 466 - 518
Target Start/End: Complemental strand, 9778627 - 9778575
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  9778627 aacctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacac 9778575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 470 - 522
Target Start/End: Original strand, 32287404 - 32287456
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgt 522  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgt 32287456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 598327 - 598278
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 598278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 6490835 - 6490786
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 21864927 - 21864878
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacac 21864878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 24105797 - 24105748
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacac 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 601
Target Start/End: Complemental strand, 30813916 - 30813778
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgg-------acacttgtaattacactgcattatctaattttttcaaattattaact 561  Q
    ||||||||||| ||||||||||||||||||||||| | | ||||||       |||| ||||||||||||| ||||| ||||||| ||||||||||| |     
T  30813916 ctatgaagcacggacactcctcggattaggcgtgttctgatgtcggacacgcaacacctgtaattacactgaattatgtaattttctcaaattattagca 30813817  T
Q  562 gtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 601  Q
     ||| || ||||||||||| || | ||||| |||||||||    
T  30813816 atgtcggagtatcagtgtctgtct-cgtgtatgtgtccgt 30813778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 40131939 - 40131988
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacac 40131988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 43027404 - 43027453
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacac 43027453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 24105730 - 24105658
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| || ||  |||||||||||||||||| |||||| ||||| |||||||| |||||    
T  24105730 gacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 24105658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 586
Target Start/End: Original strand, 18215144 - 18215265
Alignment:
Q  476 gcacagacactcctcggattaggcgtgtcccggtgtcggaca-----------cttgtaattacactgcattatctaattttttcaaattattaactgtg 564  Q
    |||| |||||||||| ||||||||||||||||||||||||||           ||||||| ||||||||||||| | ||||||||||||||||| ||| |    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcg 18215243  T
Q  565 ttggcgtatcagtgtcagtgtc 586  Q
    | ||||| | |||||| |||||    
T  18215244 tcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 502
Target Start/End: Original strand, 23128598 - 23128636
Alignment:
Q  464 tcaacctatgaagcacagacactcctcggattaggcgtg 502  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23128598 tcaacctatgaagcacagacactcctcggattaggcgtg 23128636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 580
Target Start/End: Complemental strand, 24339694 - 24339628
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| ||| ||||    
T  24339694 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtc 24339628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 515
Target Start/End: Complemental strand, 24339772 - 24339726
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcgga 24339726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 1433578 - 1433529
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacac 1433529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 579
Target Start/End: Complemental strand, 7438758 - 7438693
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt 579  Q
    |||||||||||||||| || ||||| | |||||||||||||||||||||||| ||| | |||||||    
T  7438758 gacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 14729822 - 14729773
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||||    
T  14729822 ctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacac 14729773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 580
Target Start/End: Complemental strand, 25481953 - 25481888
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| ||| ||||    
T  25481953 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtc 25481888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 586
Target Start/End: Complemental strand, 27945137 - 27945021
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    ||||||||||| |||||||||||  ||||||||| | ||    || |||||||||||||||||| ||||| ||||||| |||||||||||   |||| ||    
T  27945137 ctatgaagcacggacactcctcgagttaggcgtgacacgacaccg-acacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcgg 27945039  T
Q  569 cgtatcagtgtcagtgtc 586  Q
    ||| |||||||| |||||    
T  27945038 cgtgtcagtgtccgtgtc 27945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 571
Target Start/End: Complemental strand, 28155673 - 28155565
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac------ttgtaattacactgcattatctaattttttcaaattattaactg 562  Q
    ||||||||||| |||| |||| ||||||||||||||| |||||| |||||      |||||||||||| | ||||| ||||||| ||||||||||| | |    
T  28155673 ctatgaagcacggacattccttggattaggcgtgtcctggtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcgg 28155574  T
Q  563 tgttggcgt 571  Q
    ||| |||||    
T  28155573 tgtcggcgt 28155565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 29763129 - 29763178
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacac 29763178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 38804489 - 38804538
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  38804489 ctatgaagcacatacactcctcggattaggcatgtcccggcgtcggacac 38804538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 21880271 - 21880223
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggaca 21880223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 513
Target Start/End: Original strand, 38134335 - 38134379
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcg 513  Q
    |||||||||||| |||||||||||||||||||||||||| |||||    
T  38134335 ctatgaagcacatacactcctcggattaggcgtgtcccgatgtcg 38134379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 517
Target Start/End: Original strand, 40287306 - 40287350
Alignment:
Q  473 gaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggaca 40287350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 43027476 - 43027548
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||| |||||||||||||| | ||||||||||||||||| ||| || | ||| |||||||| |||||    
T  43027476 gacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtc 43027548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 592
Target Start/End: Original strand, 9408341 - 9408420
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc-agtgtccgtgtc 592  Q
    ||||||||||||||||||  ||||| | |||||||||||||||||| ||||| || || ||||||||  |||||||||||    
T  9408341 gacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtctggtgtccgtgtc 9408420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 469 - 512
Target Start/End: Original strand, 18212973 - 18213016
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtc 18213016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 15680929 - 15680879
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||||||| ||||| |||||| |||||||||||||    
T  15680929 cctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacac 15680879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 32093954 - 32094004
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgt-cccggtgtcggacac 518  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacac 32094004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 35750007 - 35749957
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||| || |||| |||||||||| ||||||||    
T  35750007 cctatgaagcacagacactcctccgactaggtgtgtcccggtttcggacac 35749957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 467 - 505
Target Start/End: Complemental strand, 35862072 - 35862034
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcc 505  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  35862072 acctatgaagcacggacactcctcggattaggcgtgtcc 35862034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 472 - 513
Target Start/End: Original strand, 8842282 - 8842323
Alignment:
Q  472 tgaagcacagacactcctcggattaggcgtgtcccggtgtcg 513  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtcg 8842323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 470 - 507
Target Start/End: Original strand, 11272531 - 11272568
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccg 507  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11272531 tatgaagcacagatactcctcggattaggcgtgtcccg 11272568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 17852119 - 17852070
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||| |||||| ||||| |||||||||||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacac 17852070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 21568561 - 21568610
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||||||||| ||||| || |||||||||||| |||||    
T  21568561 ctatgaagcacagacactcctcagattaagcatgtcccggtgtccgacac 21568610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 11061083 - 11061155
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||| |||  ||||| | ||||||||||||||||| |||||| || || |||||||| |||||    
T  11061083 gacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtc 11061155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 518
Target Start/End: Complemental strand, 13770810 - 13770766
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacac 13770766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 558
Target Start/End: Complemental strand, 21880204 - 21880160
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||    
T  21880204 gacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 558
Target Start/End: Original strand, 26033468 - 26033512
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  26033468 gacacttgtaattacactgaattatgtgattttttcaaattatta 26033512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 43250045 - 43249973
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||| ||||||||||| ||||| | ||||| ||||||||||| | |||| ||||| |||||||| |||||    
T  43250045 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtc 43249973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 518
Target Start/End: Complemental strand, 43250118 - 43250074
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacac 43250074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 20545185 - 20545232
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||||||||||||| ||||  |||||||| ||||||||||    
T  20545185 tatgaagcacagacactcctcgaattaaacgtgtccccgtgtcggaca 20545232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 5409843 - 5409909
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||||| ||||| ||||| | ||||||||||||||||| |||| |  |||| ||||||||    
T  5409843 gacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtc 5409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Complemental strand, 21930680 - 21930615
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    |||||||||||||| | || ||||||||||||||| ||||||||| ||| || ||||| ||||||||    
T  21930680 gacacttgtaattaaaatgaattatctaatttttt-aaattattagctgagtcggcgtgtcagtgtc 21930615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 507
Target Start/End: Complemental strand, 23752018 - 23751980
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccg 507  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  23752018 ctatgaagcacagacacttatcggattaggcgtgtcccg 23751980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 587 - 633
Target Start/End: Complemental strand, 24105675 - 24105629
Alignment:
Q  587 cgtgtctgtgtccgtgtcgtatctgtatccgtatccatgcttcatag 633  Q
    |||||| ||||||||||||| || |||||||||||| ||||||||||    
T  24105675 cgtgtcagtgtccgtgtcgtgtccgtatccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 507
Target Start/End: Original strand, 28973881 - 28973919
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccg 507  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  28973881 ctatgaagcacggacacacctcggattaggcgtgtcccg 28973919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 507
Target Start/End: Original strand, 29812598 - 29812636
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccg 507  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  29812598 ctatgaagcacggacacttctcggattaggcgtgtcccg 29812636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 517
Target Start/End: Complemental strand, 1401143 - 1401094
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||  |||||||||| ||||||| |||||||| |||||||||    
T  1401143 cctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggaca 1401094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 3294252 - 3294293
Alignment:
Q  477 cacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||| |||||| ||||||||||||||||||||||| ||||||    
T  3294252 cacatacactcttcggattaggcgtgtcccggtgttggacac 3294293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 3991432 - 3991395
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtccc 506  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  3991432 ctatgaagcccggacactcctcggattaggcgtgtccc 3991395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 7133212 - 7133261
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||| |||||| ||||||| ||||||| |||||||||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacac 7133261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 5e-18; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 468 - 523
Target Start/End: Complemental strand, 8343087 - 8343032
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgta 523  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  8343087 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgta 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 8343447 - 8343397
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8343447 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 36450694 - 36450743
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacac 36450743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 467 - 571
Target Start/End: Complemental strand, 27213646 - 27213542
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgtt 566  Q
    ||||||||||||| |||||| |||||||||| |||||||||||||| ||||| | |||||||| || ||||| | ||||| | ||||||||| | ||||     
T  27213646 acctatgaagcacggacacttctcggattagccgtgtcccggtgtccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtc 27213547  T
Q  567 ggcgt 571  Q
    |||||    
T  27213546 ggcgt 27213542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 466 - 518
Target Start/End: Original strand, 29510230 - 29510282
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  29510230 aacctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 29510282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 4673351 - 4673400
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  4673351 aacctatgaagcacagacactccttggattaggcgtgttccggtgtcgga 4673400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 566
Target Start/End: Original strand, 8798805 - 8798890
Alignment:
Q  481 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgtt 566  Q
    ||||||||| ||||||||||||| |||||||||||||| | |||||| | || ||||| | ||||| ||||||||||||| |||||    
T  8798805 gacactccttggattaggcgtgttccggtgtcggacacatataattatattgaattatgttattttctcaaattattaacagtgtt 8798890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 22652106 - 22652057
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacac 22652057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 513
Target Start/End: Original strand, 13436910 - 13436954
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcg 513  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  13436910 ctatgaagcacagacactccttggattaggcgtgtcccggtgtcg 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 25566954 - 25566910
Alignment:
Q  464 tcaacctatgaagcacagacactcctcggattaggcgtgtcccgg 508  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  25566954 tcaatctatgaagcacagacactcctcggattaggcgtgtcccgg 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 580
Target Start/End: Original strand, 30077351 - 30077460
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 568  Q
    |||||||||||||||||| |||||||  ||||| |||  |   ||||||||||||||||||||| ||||| | || |||||||||||||| ||| |||||    
T  30077351 ctatgaagcacagacactgctcggatcgggcgtatcc--gacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttgg 30077448  T
Q  569 cgtatcagtgtc 580  Q
    ||| || |||||    
T  30077449 cgtgtccgtgtc 30077460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 516 - 580
Target Start/End: Original strand, 30271300 - 30271364
Alignment:
Q  516 cacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||||||||||||||| | |||||||||||| |||| |||||| ||||| ||||||||    
T  30271300 cacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtc 30271364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 514 - 601
Target Start/End: Complemental strand, 24669485 - 24669399
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 601  Q
    ||||||||||||||||||| ||||| ||||||  ||||||||||||| ||||  |||| |||||||| |||| |||||| ||||||||    
T  24669485 gacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgt-cgtgtccgtgtccgt 24669399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 15816058 - 15816104
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcgga 15816104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 511
Target Start/End: Original strand, 16641909 - 16641951
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgt 511  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtgt 16641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 589
Target Start/End: Original strand, 36450762 - 36450836
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 589  Q
    |||||||||||||||||| ||| | | |||||||||||||||||  ||||| ||||| |||||||| ||||||||    
T  36450762 acacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtccgt 36450836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 468 - 518
Target Start/End: Original strand, 38487156 - 38487206
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  38487156 cctatgaagcacagacactcctcggattatgtgtgtccgggtgtcggacac 38487206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 586
Target Start/End: Original strand, 4673435 - 4673504
Alignment:
Q  517 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||| ||| | | ||||||||||||||||| |||||| ||||| |||||||| |||||    
T  4673435 acttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtc 4673504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 514
Target Start/End: Complemental strand, 17751775 - 17751730
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgg 514  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||    
T  17751775 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17751730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 514
Target Start/End: Complemental strand, 17760762 - 17760717
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgg 514  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||    
T  17760762 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17760717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 518
Target Start/End: Original strand, 22943301 - 22943338
Alignment:
Q  481 gacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacac 22943338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 518
Target Start/End: Complemental strand, 5813714 - 5813662
Alignment:
Q  466 aacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||| ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  5813714 aacctacgaagcacggacactcctccaattaggcgtgtcccggtgtcggacac 5813662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 18170489 - 18170561
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||| ||||||||||| || ||||| ||||||||||||||| |||| ||||| ||||| |||||||| |||||    
T  18170489 gacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtc 18170561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 18634057 - 18634129
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||| ||||||||||| || ||||| ||||||||||||||| |||| ||||| ||||| |||||||| |||||    
T  18634057 gacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtc 18634129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 20873121 - 20873049
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| || ||| ||||| |||||||| |||||    
T  20873121 gacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtc 20873049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 22197749 - 22197821
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||  ||||| | | ||||||||||||||| |||||||||||| | |||||| |||||    
T  22197749 gacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtc 22197821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 579
Target Start/End: Complemental strand, 22596045 - 22595981
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt 579  Q
    |||||||||||||||||| ||||| | ||||||| ||||||||| |||||| ||||| |||||||    
T  22596045 acacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 22652028 - 22651956
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||| | || ||||| | ||||||||||||||||| |||||| ||||| |||||||| |||||    
T  22652028 gacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 22651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 29510311 - 29510383
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||| |||| ||| | | ||||||||||||||||| |||||| ||||| |||||||| |||||    
T  29510311 gacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 29510383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 25566893 - 25566842
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||    
T  25566893 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 25566842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 41831947 - 41831998
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    |||||||||| |||||||| ||||| | ||||||||||||||||||||||||    
T  41831947 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgt 41831998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 471 - 518
Target Start/End: Complemental strand, 44067644 - 44067597
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacac 44067597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 503
Target Start/End: Complemental strand, 11833969 - 11833935
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgt 503  Q
    |||||||||||||||||||||||||||||||||||    
T  11833969 ctatgaagcacagacactcctcggattaggcgtgt 11833935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 467 - 517
Target Start/End: Complemental strand, 13397672 - 13397622
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  13397672 acctatgaagcacggacactccttgaattaggcgtgtctcggtgtcggaca 13397622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 518
Target Start/End: Original strand, 30067967 - 30068017
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||| |||||||||| ||||||| |||||||||||    
T  30067967 cctatgaagcacggacactcatcggattaggtgtgtcccagtgtcggacac 30068017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 571
Target Start/End: Original strand, 4298893 - 4298950
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 571  Q
    |||||||||||||||| |  ||||| | |||||||||||||||||||||||| |||||    
T  4298893 gacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgt 4298950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 518
Target Start/End: Original strand, 22197667 - 22197720
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||| |||||| |||||||||| |||||||||||  ||||||||||||||    
T  22197667 caacctataaagcacggacactcctcagattaggcgtgatccggtgtcggacac 22197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 24858135 - 24858086
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||| ||||||||| ||||||||||||||||| || ||||||    
T  24858135 ctatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacac 24858086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 29447574 - 29447525
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||||||| |||||| | ||||||||||||||||||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacac 29447525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 578
Target Start/End: Complemental strand, 31557045 - 31556985
Alignment:
Q  517 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtg 578  Q
    |||||||||||||||| ||||| | |||||| ||||||||||||||||| ||||| ||||||    
T  31557045 acttgtaattacactgaattatgtgattttt-caaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 39820547 - 39820499
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcggacac 39820499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 40064081 - 40064032
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||||||    
T  40064081 ctatgtagcacggacactcctcggattagatgtgtcccggtgtcggacac 40064032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 558
Target Start/End: Complemental strand, 4948704 - 4948660
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattatta 558  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  4948704 gacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 8343368 - 8343296
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| || ||| || || || |||||||||||    
T  8343368 gacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtc 8343296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 11803389 - 11803341
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggaca 11803341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 511
Target Start/End: Complemental strand, 16988030 - 16987990
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgt 511  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgt 16987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 29447040 - 29447088
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| ||||||||| ||||||||||||||| |||||| |||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacac 29447088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 926730 - 926777
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| |||||||||||||| | || ||||||||||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacac 926777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 517
Target Start/End: Original strand, 14639735 - 14639778
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||    
T  14639735 aagcacagatactccttggattaggcatgtcccggtgtcggaca 14639778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 504
Target Start/End: Complemental strand, 18964309 - 18964274
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtc 504  Q
    |||||||||||||||||||||||||| |||||||||    
T  18964309 ctatgaagcacagacactcctcggataaggcgtgtc 18964274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 20679337 - 20679384
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||  |||||||||||| | |||||||||||||||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacac 20679384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 24205749 - 24205796
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||| ||| ||||||||||||||||||||||| |||||||| ||||    
T  24205749 tatgaaacacggacactcctcggattaggcgtgttccggtgtcagaca 24205796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 579
Target Start/End: Original strand, 24727760 - 24727826
Alignment:
Q  515 acacttgtaattacactgcattatctaa--ttttttcaaattattaactgtgttggcgtatcagtgt 579  Q
    ||||||| |||||||||||||||| |||  ||||||||||||||||  ||||||| ||| |||||||    
T  24727760 acacttgaaattacactgcattatgtaattttttttcaaattattagttgtgttgacgtgtcagtgt 24727826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 504
Target Start/End: Complemental strand, 31514973 - 31514938
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtc 504  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31514973 ctatgaagcacggacactcctcggattaggcgtgtc 31514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 518
Target Start/End: Complemental strand, 40332312 - 40332261
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||| |||| ||| |||||||||||||||||||| |||||||||| ||||||    
T  40332312 acctgtgaaacacggacactcctcggattaggcgcgtcccggtgtgggacac 40332261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 585
Target Start/End: Complemental strand, 44067568 - 44067497
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgt 585  Q
    ||||||| ||||||||||| ||||| | ||||| ||||||||||| | |||| ||||| |||||||| ||||    
T  44067568 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgt 44067497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 569
Target Start/End: Complemental strand, 7442896 - 7442842
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggc 569  Q
    |||||||||||||||||| ||||| ||||||| | ||||||||| | ||||||||    
T  7442896 acacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggc 7442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 7616768 - 7616814
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    |||||||||||| | |||||| ||||||||||||||| |||||||||    
T  7616768 ctatgaagcacatatactcctgggattaggcgtgtccaggtgtcgga 7616814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 515
Target Start/End: Complemental strand, 11944795 - 11944749
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    |||||||||||  |||||| |||||||||||||||| ||||||||||    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcgga 11944749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 517
Target Start/End: Complemental strand, 13403227 - 13403177
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||| ||||||||| | |||| ||||||| ||||||||||||    
T  13403227 acctatgaagcacggacactccttgaattaagcgtgtctcggtgtcggaca 13403177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 13436971 - 13437037
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||| |||||  || ||||| | ||||||||||||||||| |||||| ||||| ||||||||    
T  13436971 gacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 13437037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 15816136 - 15816202
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||| ||||||||||  ||||| | |||||||||||||||||  ||||| ||||| ||||||||    
T  15816136 gacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 517
Target Start/End: Complemental strand, 18407840 - 18407790
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||||| ||||||||||  |||||||||||||  ||||||||||    
T  18407840 acctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggaca 18407790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 25192354 - 25192420
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||| |||||| |||| ||||| | | ||||||||||||||| |||||| ||||| ||||||||    
T  25192354 gacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtc 25192420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 512
Target Start/End: Original strand, 31109463 - 31109501
Alignment:
Q  474 aagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtc 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 518
Target Start/End: Original strand, 12559044 - 12559089
Alignment:
Q  473 gaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||| |||||||  |||||||| ||||||||||    
T  12559044 gaagcacagacactcctgggattagatgtgtcccgttgtcggacac 12559089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 14134818 - 14134769
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||| ||| ||||||||||| ||||||||||||| |||| |||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacac 14134769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 24413499 - 24413548
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||| |||||||||| ||||||||| ||| ||||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacac 24413548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 34450961 - 34451010
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||| |||| ||||||||||| ||||| |||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 34451010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 515 - 589
Target Start/End: Complemental strand, 51862 - 51788
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 589  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| |||||||| ||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 51788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 51941 - 51893
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||  |||| |||||||||||||||||||||||||| ||||||    
T  51941 tatgaagcatggacattcctcggattaggcgtgtcccggtgttggacac 51893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 71860 - 71806
Alignment:
Q  464 tcaacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  71860 tcaacctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacac 71806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 601
Target Start/End: Original strand, 192256 - 192342
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 601  Q
    ||||||||||||||||| | ||||| ||||||| ||||||||||||| |||| ||||| |||||||| || | |||||||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtat-cgtgtctgtgtccgt 192342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 178825 - 178898
Alignment:
Q  514 gacacttgtaattacactgcattatc-taattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| |||||  | |||||||||||||||||  ||||| ||||| |||||||| |||||    
T  178825 gacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 178898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 465 - 518
Target Start/End: Original strand, 236910 - 236963
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  236910 caacctatgaagcacagacactcctcagattaggtgtgtcccggtgtcagacac 236963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 241724 - 241675
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 241675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 4821 - 4869
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 403 - 451
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 469 - 535
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||||||||||| ||| | | ||||||||||||||||| | |||| ||||||||||||||    
T  469 gacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtc 535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 20224 - 20152
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| ||| |||| |||||    
T  20224 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtc 20152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 3856 - 3928
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| | ||||||| ||||||||||| |||| ||| |||||||||| |||||    
T  3856 gacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtc 3928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 517
Target Start/End: Original strand, 3777 - 3826
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||||  |||||||||||||||||||||||| || |||||||||    
T  3777 cctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggaca 3826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 514 - 590
Target Start/End: Complemental strand, 92859 - 92783
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtg 590  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||| | |||| ||||| |||||||| || ||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgtatccgtg 92783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 92940 - 92893
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggaca 517  Q
    |||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgaca 92893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 470 - 579
Target Start/End: Complemental strand, 123731 - 123612
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgt-------cggacacttgtaattacactgcattatctaatt---ttttcaaattattaa 559  Q
    ||||||||| ||| |||||||||||||||||||||| | |||       | ||||||||||||||||||| ||||| | |||   |||| |||||||||     
T  123731 tatgaagcatagatactcctcggattaggcgtgtcctgatgttaagacaccgacacttgtaattacactgaattatgtgattctttttttaaattattag 123632  T
Q  560 ctgtgttggcgtatcagtgt 579  Q
    |||||||||||| |||||||    
T  123631 ctgtgttggcgtgtcagtgt 123612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 580
Target Start/End: Original strand, 7040 - 7105
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 580  Q
    ||||||||||||| |||  ||||| ||||||||||||||||||| |||||| | ||||||||||||    
T  7040 acacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtc 7105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 470 - 527
Target Start/End: Complemental strand, 32822 - 32765
Alignment:
Q  470 tatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacttgtaatta 527  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||| | ||||||    
T  32822 tatgaagcaccgacactcctcggattatgtgtgtcccggtgtcggacacatataatta 32765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 512
Target Start/End: Complemental strand, 3428 - 3384
Alignment:
Q  468 cctatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||||||||| |||||||||||||||||||||||||| |||||    
T  3428 cctatgaagcacggacactcctcggattaggcgtgtcccagtgtc 3384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 485 - 593
Target Start/End: Complemental strand, 26079 - 25971
Alignment:
Q  485 ctcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtg 584  Q
    |||||| | |||||||||||||| |||||||||| | | ||| ||||| || || | ||||| ||| ||||||| |  ||| || |||||||||||||||    
T  26079 ctcctcagcttaggcgtgtcccgatgtcggacacctatgattgcactgaatcatgtcattttctcacattattatcgatgtcggtgtatcagtgtcagtg 25980  T
Q  585 tccgtgtct 593  Q
    |||||||||    
T  25979 tccgtgtct 25971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 8850 - 8778
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||  || || | ||||||||||||||||| |||||| ||||| |||||||| |||||    
T  8850 gacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 8778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 8917 - 8868
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| || ||||||| ||||||||||||| |||||||||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacac 8868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 130534 - 130462
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||||||||||||||| ||||| | ||||||||||| |||||||||||| ||| | ||| |||| |||||    
T  130534 gacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtc 130462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 467 - 518
Target Start/End: Complemental strand, 8722 - 8671
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||| ||||||||| ||||||||||| |||| |||||||||||    
T  8722 acctatgaagcacggacactccttggattaggcgtatcccagtgtcggacac 8671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 465 - 504
Target Start/End: Complemental strand, 21411 - 21372
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtc 504  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  21411 caacctatgaagcacagacacttctcggattaggcgtgtc 21372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 504
Target Start/End: Complemental strand, 21282 - 21243
Alignment:
Q  465 caacctatgaagcacagacactcctcggattaggcgtgtc 504  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  21282 caacctatgaagcacggatactcctcggattaggcgtgtc 21243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 70330 - 70279
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 565  Q
    ||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  70330 gacacttataattacactgaattatgttattttttcaaattattaactgtgt 70279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 4976 - 5025
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||||||||||||||||||||| |||| |  ||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacac 5025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 8564 - 8613
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||| ||||||||||| ||||||||||| || |||||||||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacac 8613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 3058 - 3009
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||| ||||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacac 3009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 571
Target Start/End: Original strand, 33375 - 33427
Alignment:
Q  519 ttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 571  Q
    |||||||||||||| ||||| | ||||||||||||||||| |||||| |||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgt 33427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 225275 - 225347
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    ||||||| |||||||| || ||||| | ||||| ||||||||||| |||||| ||||| |||||||| |||||    
T  225275 gacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtc 225347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 225199 - 225246
Alignment:
Q  471 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||| ||||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacac 225246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 571
Target Start/End: Complemental strand, 14580 - 14525
Alignment:
Q  516 cacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 571  Q
    ||||||||||||||||| ||||| | |||||||||||||||||  ||||| |||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgt 14525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 14646 - 14597
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||  ||||||||  ||||||||||||| |||||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacac 14597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 586
Target Start/End: Complemental strand, 19626 - 19556
Alignment:
Q  515 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 586  Q
    |||||||||||||||||| ||||| | |||||| ||||||||||  ||| | ||||| ||||||||||||||    
T  19626 acacttgtaattacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtgtcagtgtc 19556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 512
Target Start/End: Complemental strand, 15090 - 15047
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtc 512  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||    
T  15090 ctatgaagcacaaacactcctcggataaggcgtgtccccgtgtc 15047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 601
Target Start/End: Complemental strand, 23472 - 23386
Alignment:
Q  514 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 601  Q
    ||||||| ||||||||||| ||||| | |||||||  | |||||| |||||| ||||| |||||||| |||| |||||| ||||||||    
T  23472 gacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgt-cgtgtccgtgtccgt 23386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 518
Target Start/End: Complemental strand, 24157 - 24107
Alignment:
Q  467 acctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    ||||||||||||| ||||||| ||||||||||||||| || |||||||||||    
T  24157 acctatgaagcacggacactcatcggattaggcgtgt-ccagtgtcggacac 24107  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 564
Target Start/End: Complemental strand, 23822 - 23771
Alignment:
Q  514 gacacttgtaattacactgcattatct-aattttttcaaattattaactgtg 564  Q
    ||||||||||||||||||| ||||| | | ||||||||||||||||||||||    
T  23822 gacacttgtaattacactgaattatgtgatttttttcaaattattaactgtg 23771  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 515
Target Start/End: Complemental strand, 188512 - 188473
Alignment:
Q  476 gcacagacactcctcggattaggcgtgtcccggtgtcgga 515  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  188512 gcacggacactcctcggattaggcgtgtcctggtgtcgga 188473  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 135263 - 135312
Alignment:
Q  469 ctatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 518  Q
    |||||||||||  |||| |||| |||||||||||||| ||||||||||||    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacac 135312  T

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