View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21603_high_16 (Length: 309)
Name: NF21603_high_16
Description: NF21603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21603_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 293
Target Start/End: Original strand, 29848509 - 29848784
Alignment:
| Q |
18 |
cataggtccaccttcttctgaagttcattatggacaataccatgtgaagagaacaagctctgttttgaacacaagcatctagtatattttgagcaagtag |
117 |
Q |
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| T |
29848509 |
cataggtccaccttcttctgaagttcattatggacaataccatgtgaagagaacaagctctgttttgaacacaagcatctagtatattttgagcaagtag |
29848608 |
T |
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| Q |
118 |
aagaattataatggacccttgtggtgaaaacaatagtggccatcccatgtgtgtaattttaatgctattatcaatgaatgtctccaatgagaaaatgttg |
217 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29848609 |
aagaataataatggacccttgtggtgaaaacaatagtggccatcccatgtgtgtaattttaatgctattatcaatgaatgtctccaatgagaaaatgttg |
29848708 |
T |
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| Q |
218 |
gaggcgtctaataaaagccgaagagatacaagacaagtagaatacagtcaaatactgacatgtttggattaaactg |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
29848709 |
gaggcgtctaataaaagccgaagagatacaagacaagtagaatacagtcaagtactgacatgtttggattaaactg |
29848784 |
T |
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