View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21603_high_28 (Length: 205)
Name: NF21603_high_28
Description: NF21603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21603_high_28 |
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Alignment Details
Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 10479374 - 10479203
Alignment:
| Q |
19 |
caattcgatggtagacaaggataagacttacatcatgcataagttagttttcacaattgaatcaataaatttacatgatgcaaaattgtatttttacttg |
118 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |
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| T |
10479374 |
caattcgatggtagataaggataagacttacatcatgcataagttagttttcacaattgaatcaataaatttacatgatgccaaattggatttttacttg |
10479275 |
T |
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| Q |
119 |
tgtatatcagacaaaaccagttcttaaaagtgcatgctccacaattttgcggtataacattactcatttttt |
190 |
Q |
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|||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10479274 |
tgtatatcagacaaaaccggtttttaaaagtgcatgctccacaattttgcggtataacattactcatttttt |
10479203 |
T |
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