View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21603_low_18 (Length: 271)
Name: NF21603_low_18
Description: NF21603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21603_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 689069 - 689328
Alignment:
| Q |
7 |
acaagtgttattatttgtgtatacatgtataatgctagcgattacgaaaccataggagagtaagttggaaaacagtataattgagataaaattaatgagt |
106 |
Q |
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| T |
689069 |
acaagtgttattatttgtgtatacatgtataatgctatcaattacaaaaccataggagagtaagttggaaaacagtataattgagataaaactaatgagt |
689168 |
T |
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| Q |
107 |
ctgttctttttatctaaaccctccggttcctagggaaggggccatagtaatccctagtttggtcgagacataagtaatgtctaaccaaagattgttttag |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
689169 |
ctgttctttttatctaaaccctccggttcctagggaaggggccatagtaatccctagtttggtcgtgacataagtaatgtctaaccaaagattgttttag |
689268 |
T |
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| Q |
207 |
cttggataacttcaaacttggattcttccgaaggatttgtcctttatacaagaattatat |
266 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
689269 |
cttggataacttcaaacttggattcttccgaaggatttgtcctttatacaagaatgatat |
689328 |
T |
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