View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21603_low_24 (Length: 233)
Name: NF21603_low_24
Description: NF21603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21603_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 41315135 - 41314937
Alignment:
| Q |
19 |
aagaaaacaatagatgatcaaatgtcaccgcatcacctcaaaaatctccaccgtctccttttcaaaacagctgagtattctccccgtaacacgcttggca |
118 |
Q |
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| T |
41315135 |
aagaaaacaatagatgatcaaatgtcaccgcatcacctcaaaaatctccaccgtctccttttcaaaacagctgagtattctccccgtaacacgcttggca |
41315036 |
T |
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| Q |
119 |
gtcattggagagaataccatggctgcaatgattggaaaggaatgttagatcctctcgacgagaatcttcgtcgagaggtagttcgttatggtgaatttg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41315035 |
gtcattggagagaataccatggctgcaatgattggaaaggaatgttagatcctctcgacgagaatcttcgtcgagaggtagttcgttatggtgaatttg |
41314937 |
T |
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