View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21604_low_6 (Length: 241)
Name: NF21604_low_6
Description: NF21604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21604_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 23882141 - 23881908
Alignment:
| Q |
1 |
actgatttcaccttccagttttacttgaatatgctgccaagcgagaaataagcggcaacacgtgtgaataatatgttttaactcgatgctaattgtctgc |
100 |
Q |
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| T |
23882141 |
actgatttcaccttccagttttacttgaatatgctgccaagcgagaaataagcggcaacacgtgtgaataatatgttttaactcgatgctaattgtctgc |
23882042 |
T |
|
| Q |
101 |
tagattgagatatgattctgctaattagctacttaacatgatgctaattgtatgctagactgagatgtgattaatattgatattgataccctgaagtccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23882041 |
tagattgagatatgattctgctaattagctacttaacatgatgctaattgtatgctagactgagatgtgattaatattgatattgataccctgaagtccc |
23881942 |
T |
|
| Q |
201 |
atttatattgaatcctagttgctaacctgtgctt |
234 |
Q |
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|||||||||||||||||||||||||||| ||||| |
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| T |
23881941 |
atttatattgaatcctagttgctaacctatgctt |
23881908 |
T |
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