View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21606_low_5 (Length: 338)
Name: NF21606_low_5
Description: NF21606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21606_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 20 - 329
Target Start/End: Complemental strand, 783368 - 783059
Alignment:
| Q |
20 |
gcaagtacttgaaaatatgtggaccattagagagacttaccaagggcattgataggtgagacaggagtttggaagaagataacagaagagacgatgacaa |
119 |
Q |
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| T |
783368 |
gcaagtacttgaaaatatgtggaccattagagagacttaccaagggcattgataggtgagacaggagtttggaagaagataacagaagagacgatgacaa |
783269 |
T |
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| Q |
120 |
cgacacgcttaacacaatttccgactgagtgtgtcacaggtgacactttctctaatatcccatatgaaacctgccaccaaatgaattaagctccaacatc |
219 |
Q |
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| T |
783268 |
cgacacgcttaacgcaatttccgactgagtgtgtcacaggtgacactttctctaatatcccatatgaaacctgccaccaaatgaattaagctccaacatc |
783169 |
T |
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| Q |
220 |
gatatgcaacaatgctcaataagtaagttactattactacgggaaatgttctaacattagcaactaaatatggtagtctgtacgtgtaaagaagaacgcg |
319 |
Q |
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| T |
783168 |
gatatgcaacaatgctcaataagtaagttactattactacgggaaatgttctaacattagcaactaaatatggtaatctgtacgtgtaaagaagaacacg |
783069 |
T |
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| Q |
320 |
agagtataat |
329 |
Q |
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| T |
783068 |
agaatataat |
783059 |
T |
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