View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21608_low_22 (Length: 257)

Name: NF21608_low_22
Description: NF21608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21608_low_22
NF21608_low_22
[»] chr3 (31 HSPs)
chr3 (46-257)||(45101876-45102088)
chr3 (149-257)||(41579752-41579860)
chr3 (146-257)||(29918369-29918480)
chr3 (146-257)||(29967522-29967633)
chr3 (146-257)||(30256031-30256142)
chr3 (149-255)||(2432973-2433079)
chr3 (147-257)||(28611128-28611238)
chr3 (169-257)||(46344894-46344982)
chr3 (146-257)||(29929360-29929471)
chr3 (146-257)||(29978514-29978625)
chr3 (149-255)||(7247890-7247996)
chr3 (147-257)||(19440191-19440301)
chr3 (159-257)||(42804402-42804500)
chr3 (146-257)||(43571713-43571824)
chr3 (146-254)||(66835-66942)
chr3 (149-257)||(19454353-19454461)
chr3 (150-257)||(42756097-42756204)
chr3 (147-230)||(42807655-42807738)
chr3 (162-257)||(49219819-49219914)
chr3 (149-257)||(55207691-55207799)
chr3 (149-254)||(52570597-52570701)
chr3 (187-255)||(34691600-34691668)
chr3 (153-257)||(41802939-41803043)
chr3 (207-254)||(7839530-7839577)
chr3 (159-196)||(7245098-7245135)
chr3 (214-257)||(48892153-48892195)
chr3 (159-257)||(6505979-6506077)
chr3 (214-256)||(20366194-20366236)
chr3 (149-255)||(41577012-41577118)
chr3 (209-257)||(30252563-30252611)
chr3 (149-257)||(55267378-55267486)
[»] chr5 (28 HSPs)
chr5 (145-257)||(18538363-18538475)
chr5 (149-257)||(18310049-18310157)
chr5 (145-257)||(34682190-34682302)
chr5 (156-257)||(41201672-41201773)
chr5 (146-253)||(1398538-1398645)
chr5 (146-257)||(25499915-25500028)
chr5 (146-257)||(24053114-24053225)
chr5 (146-257)||(33995176-33995287)
chr5 (149-254)||(3603179-3603284)
chr5 (149-257)||(20192290-20192398)
chr5 (149-257)||(20200176-20200284)
chr5 (146-257)||(19228674-19228785)
chr5 (146-257)||(33993214-33993325)
chr5 (161-257)||(34123963-34124059)
chr5 (146-257)||(34122458-34122569)
chr5 (147-257)||(1397378-1397488)
chr5 (187-257)||(17965824-17965894)
chr5 (149-257)||(3600273-3600382)
chr5 (199-252)||(7801020-7801073)
chr5 (146-202)||(1401428-1401484)
chr5 (149-257)||(31094500-31094607)
chr5 (221-256)||(24050036-24050071)
chr5 (218-257)||(25497517-25497556)
chr5 (162-257)||(38968045-38968140)
chr5 (145-254)||(35567058-35567167)
chr5 (209-257)||(13568103-13568151)
chr5 (209-257)||(18307251-18307299)
chr5 (149-257)||(25877559-25877666)
[»] chr6 (19 HSPs)
chr6 (146-256)||(13479660-13479770)
chr6 (149-257)||(13404660-13404768)
chr6 (46-138)||(31605061-31605154)
chr6 (149-257)||(29286166-29286274)
chr6 (149-257)||(35021291-35021399)
chr6 (146-257)||(23958824-23958935)
chr6 (146-255)||(32643551-32643660)
chr6 (207-254)||(7537193-7537240)
chr6 (168-251)||(12783991-12784074)
chr6 (149-256)||(13401423-13401530)
chr6 (146-257)||(18001148-18001258)
chr6 (167-257)||(23986009-23986099)
chr6 (146-196)||(32026039-32026089)
chr6 (149-257)||(25141107-25141215)
chr6 (149-243)||(6320531-6320625)
chr6 (149-257)||(18605982-18606089)
chr6 (146-196)||(17996539-17996589)
chr6 (149-257)||(7361128-7361236)
chr6 (159-219)||(34801484-34801544)
[»] chr4 (35 HSPs)
chr4 (146-257)||(29700330-29700441)
chr4 (159-257)||(33383752-33383850)
chr4 (146-257)||(4768612-4768723)
chr4 (144-257)||(955724-955837)
chr4 (146-257)||(21472512-21472623)
chr4 (146-256)||(34154431-34154541)
chr4 (145-257)||(51426470-51426582)
chr4 (146-257)||(958622-958732)
chr4 (147-253)||(21470838-21470944)
chr4 (149-257)||(11494481-11494588)
chr4 (153-257)||(49572928-49573032)
chr4 (147-257)||(37959748-37959858)
chr4 (149-255)||(38464796-38464901)
chr4 (181-257)||(18578618-18578694)
chr4 (146-257)||(51644501-51644613)
chr4 (149-256)||(4979946-4980053)
chr4 (146-257)||(34151543-34151659)
chr4 (146-203)||(44558634-44558691)
chr4 (146-254)||(44561361-44561469)
chr4 (146-195)||(18581385-18581434)
chr4 (211-255)||(24417446-24417490)
chr4 (143-255)||(49422074-49422181)
chr4 (149-252)||(6280794-6280897)
chr4 (146-257)||(17139560-17139669)
chr4 (147-196)||(48256652-48256701)
chr4 (214-254)||(9473692-9473732)
chr4 (161-257)||(37394197-37394293)
chr4 (161-257)||(50278826-50278922)
chr4 (161-257)||(56304826-56304921)
chr4 (149-257)||(6283469-6283573)
chr4 (223-257)||(18581334-18581368)
chr4 (146-195)||(3450104-3450153)
chr4 (208-257)||(33051681-33051730)
chr4 (149-254)||(44051123-44051228)
chr4 (161-257)||(8109340-8109436)
[»] chr1 (41 HSPs)
chr1 (146-257)||(36908512-36908623)
chr1 (146-257)||(41804061-41804172)
chr1 (140-257)||(46973132-46973249)
chr1 (147-257)||(26633465-26633572)
chr1 (146-253)||(13173770-13173876)
chr1 (146-254)||(19053993-19054101)
chr1 (146-257)||(38689866-38689976)
chr1 (146-252)||(35521548-35521654)
chr1 (146-257)||(4515960-4516076)
chr1 (159-255)||(35527043-35527139)
chr1 (149-257)||(46141719-46141827)
chr1 (144-251)||(21944414-21944521)
chr1 (147-219)||(7965976-7966049)
chr1 (146-257)||(36072304-36072414)
chr1 (146-257)||(36076586-36076696)
chr1 (149-254)||(6437570-6437675)
chr1 (159-252)||(25040109-25040202)
chr1 (146-202)||(7981213-7981269)
chr1 (146-257)||(29261349-29261459)
chr1 (145-254)||(14172047-14172156)
chr1 (150-257)||(36911698-36911803)
chr1 (149-257)||(49927541-49927649)
chr1 (149-256)||(18975149-18975256)
chr1 (214-257)||(27115851-27115894)
chr1 (160-257)||(19495017-19495111)
chr1 (149-257)||(8460125-8460232)
chr1 (149-253)||(13972001-13972103)
chr1 (221-257)||(14174913-14174949)
chr1 (161-257)||(27485008-27485104)
chr1 (214-254)||(45943757-45943797)
chr1 (145-256)||(51666668-51666778)
chr1 (207-257)||(30910031-30910081)
chr1 (207-257)||(41453833-41453883)
chr1 (147-193)||(42570077-42570123)
chr1 (146-179)||(1656190-1656223)
chr1 (214-255)||(51337543-51337584)
chr1 (159-219)||(1654750-1654810)
chr1 (169-257)||(6562189-6562277)
chr1 (149-257)||(23276136-23276244)
chr1 (198-254)||(23359380-23359436)
chr1 (209-257)||(29352256-29352304)
[»] chr2 (30 HSPs)
chr2 (149-257)||(35493369-35493477)
chr2 (146-257)||(2917617-2917728)
chr2 (146-257)||(45475374-45475485)
chr2 (146-257)||(23409529-23409640)
chr2 (159-256)||(35490627-35490724)
chr2 (144-257)||(41181369-41181482)
chr2 (149-257)||(25184858-25184965)
chr2 (149-257)||(28342460-28342568)
chr2 (159-257)||(12905496-12905594)
chr2 (150-255)||(82292-82396)
chr2 (148-256)||(19186683-19186791)
chr2 (149-257)||(41500262-41500370)
chr2 (147-254)||(8268780-8268887)
chr2 (146-256)||(34921788-34921897)
chr2 (161-257)||(1096544-1096640)
chr2 (149-229)||(16580482-16580562)
chr2 (147-257)||(19187251-19187361)
chr2 (187-257)||(45137461-45137531)
chr2 (209-254)||(24601636-24601681)
chr2 (209-254)||(24612433-24612478)
chr2 (190-254)||(2648776-2648840)
chr2 (149-257)||(24607596-24607704)
chr2 (214-257)||(36255019-36255062)
chr2 (144-255)||(41053698-41053809)
chr2 (207-257)||(3795332-3795382)
chr2 (159-257)||(24512114-24512212)
chr2 (159-257)||(41497419-41497517)
chr2 (144-257)||(45479822-45479935)
chr2 (152-257)||(43950270-43950374)
chr2 (209-257)||(12908457-12908505)
[»] chr7 (29 HSPs)
chr7 (149-257)||(41049217-41049324)
chr7 (149-257)||(42681931-42682039)
chr7 (149-254)||(48314611-48314715)
chr7 (146-257)||(9494834-9494945)
chr7 (159-254)||(46860458-46860553)
chr7 (149-257)||(21185556-21185664)
chr7 (149-257)||(37340239-37340347)
chr7 (41-112)||(4952467-4952539)
chr7 (146-226)||(28112776-28112856)
chr7 (149-257)||(30355267-30355375)
chr7 (145-257)||(36186501-36186612)
chr7 (149-257)||(36392062-36392170)
chr7 (149-257)||(47060864-47060971)
chr7 (146-257)||(10705182-10705293)
chr7 (149-256)||(46863373-46863480)
chr7 (149-257)||(27453622-27453730)
chr7 (146-238)||(10225890-10225983)
chr7 (214-257)||(21188428-21188471)
chr7 (149-256)||(39460490-39460597)
chr7 (208-257)||(40166788-40166837)
chr7 (149-257)||(28980201-28980309)
chr7 (214-254)||(40142692-40142732)
chr7 (149-196)||(41623904-41623951)
chr7 (146-196)||(11100536-11100586)
chr7 (149-255)||(34622436-34622542)
chr7 (143-257)||(34623408-34623522)
chr7 (207-257)||(45361644-45361694)
chr7 (161-257)||(29593356-29593452)
chr7 (149-193)||(36395037-36395081)
[»] chr8 (27 HSPs)
chr8 (149-257)||(18438571-18438679)
chr8 (146-257)||(7168022-7168133)
chr8 (150-257)||(41855306-41855413)
chr8 (154-257)||(38871741-38871844)
chr8 (149-257)||(38872958-38873066)
chr8 (149-257)||(41858149-41858257)
chr8 (149-257)||(18441469-18441577)
chr8 (149-252)||(34823049-34823152)
chr8 (141-257)||(3395821-3395937)
chr8 (146-254)||(4866369-4866476)
chr8 (159-254)||(28168630-28168723)
chr8 (147-257)||(42602395-42602505)
chr8 (207-257)||(42605262-42605312)
chr8 (214-254)||(21835210-21835250)
chr8 (149-257)||(35389445-35389553)
chr8 (161-257)||(45454355-45454451)
chr8 (214-257)||(28646275-28646318)
chr8 (214-257)||(28650859-28650902)
chr8 (215-257)||(18205789-18205831)
chr8 (161-251)||(44052260-44052350)
chr8 (204-257)||(1116216-1116269)
chr8 (161-257)||(43188022-43188119)
chr8 (214-254)||(21406269-21406309)
chr8 (214-254)||(21800761-21800801)
chr8 (181-257)||(35962276-35962352)
chr8 (164-252)||(35966782-35966870)
chr8 (149-257)||(39751011-39751118)
[»] scaffold0388 (1 HSPs)
scaffold0388 (142-256)||(11739-11853)
[»] scaffold0618 (1 HSPs)
scaffold0618 (169-257)||(3843-3930)
[»] scaffold0360 (1 HSPs)
scaffold0360 (159-257)||(7332-7430)
[»] scaffold0219 (1 HSPs)
scaffold0219 (214-257)||(15705-15748)
[»] scaffold0188 (1 HSPs)
scaffold0188 (146-196)||(27377-27427)
[»] scaffold0012 (1 HSPs)
scaffold0012 (187-257)||(232523-232593)
[»] scaffold0126 (1 HSPs)
scaffold0126 (146-202)||(15920-15976)
[»] scaffold0192 (1 HSPs)
scaffold0192 (146-240)||(16346-16439)
[»] scaffold0147 (1 HSPs)
scaffold0147 (146-195)||(885-934)
[»] scaffold0341 (1 HSPs)
scaffold0341 (169-257)||(17379-17467)
[»] scaffold0169 (1 HSPs)
scaffold0169 (224-256)||(1686-1718)
[»] scaffold0057 (1 HSPs)
scaffold0057 (190-254)||(23258-23322)


Alignment Details
Target: chr3 (Bit Score: 161; Significance: 6e-86; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 46 - 257
Target Start/End: Complemental strand, 45102088 - 45101876
Alignment:
Q  46 cccccatgtttgg-ggccagcagctgctttcattggttggaacctcaatcgtgagttcttcgctataacatccttccggatatatggcattgcttcttga 144  Q
    ||||||||||| | ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  45102088 cccccatgttttgtggccagcagtttctttcattggttggaacctcaatcgtgagttcttcgctataacatccttcccgatatatagcattgcttcttga 45101989  T
Q  145 ggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggct 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| || |||||| |||||||||| ||||||||||||||||||||    
T  45101988 ggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacgtttttatcccctcggcagttaattgttgaggaattcaaaaaccggct 45101889  T
Q  245 gcagttaactgcc 257  Q
    |||||||||||||    
T  45101888 gcagttaactgcc 45101876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 41579860 - 41579752
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||||| || ||||||| |||||||||||||||||||||  ||||  | |||||| |||||||||  ||||||||||| ||||||||||||    
T  41579860 aattgttgttgacacgttgcataaggctgaggcacataagtaaaatacgatttttccccctcggcagttaattgctgaggaattcaataaccggctgcag 41579761  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  41579760 ttaactgcc 41579752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 29918480 - 29918369
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||||||||  ||||| | |||||| | |||| || |||  ||||| |||||||||||    
T  29918480 gaaaattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctg 29918381  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  29918380 cagttaactgcc 29918369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 29967633 - 29967522
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||||||||  ||||| | |||||| | |||| || |||  ||||| |||||||||||    
T  29967633 gaaaattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctg 29967534  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  29967533 cagttaactgcc 29967522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 30256142 - 30256031
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||| | ||||||||| ||||||||||||    || | ||| ||||||||| || ||||||||| ||||||||||||    
T  30256142 gaaaattgttgttgacacatttcataaagctgaggcacacaagtaaaatacataaatgcccccttggtagttaactgccgaggaattaaaaaaccggctg 30256043  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  30256042 cagttaactgcc 30256031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 2433079 - 2432973
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| |||||||||  |||||||||| ||||| || |||||| |||||| ||||||||||||||| |||||| | |||    
T  2433079 aattgttgttgacacattgcataaggctgaggcacacgagtaaaatacgcttttatcccctcggcagttaactgtcgaggaattcaataaccggatacag 2432980  T
Q  249 ttaactg 255  Q
    |||||||    
T  2432979 ttaactg 2432973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 28611238 - 28611128
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgc 246  Q
    ||||||||| |  ||||||||||||||| |||| |||| |||||||||| | ||||| | |||||| |||||| || |||| ||||||||||||||||||    
T  28611238 aaaattgttctttacacatttcataaggctgagacacacaagtaaaatataattttgccccctcggcagttaactgccgagaaattcaaaaaccggctgc 28611139  T
Q  247 agttaactgcc 257  Q
    |||||||||||    
T  28611138 agttaactgcc 28611128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 46344894 - 46344982
Alignment:
Q  169 ataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||||||||||||| ||||||||||   ||||| | |||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  46344894 ataaggttgaggcacacaagtaaaatatttttttgccccctcggcagttaactgtcgaggaattcaaaaatcggctgcagttaactgcc 46344982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 29929360 - 29929471
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| ||||||||| |||||| ||||||||| ||||||||||   |||||   |||||  |||||| ||| |||||||||||||||||||||    
T  29929360 gaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaaccggctg 29929459  T
Q  246 cagttaactgcc 257  Q
    || |||||||||    
T  29929460 caattaactgcc 29929471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 29978514 - 29978625
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| ||||||||| |||||| ||||||||| ||||||||||   |||||   |||||  |||||| ||| |||||||||||||||||||||    
T  29978514 gaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaaccggctg 29978613  T
Q  246 cagttaactgcc 257  Q
    || |||||||||    
T  29978614 caattaactgcc 29978625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 7247996 - 7247890
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||||||||  |||||| |||||||||  | |||||||| |||||| | |||||| |||||| || |||||||||||| ||||||||||||    
T  7247996 aattgttgttgacacattggataaggctgaggcacacgaataaaatacgcttttgccccctcggcagttaactgccgaggaattcaataaccggctgcag 7247897  T
Q  249 ttaactg 255  Q
    |||||||    
T  7247896 ttaactg 7247890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 257
Target Start/End: Original strand, 19440191 - 19440301
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgc 246  Q
    ||||||| ||| || ||||| ||||| | |||||||||  ||||||||| ||||||| |||||||| |||||| || ||| ||||||| |||||||||||    
T  19440191 aaaattgctgttgatacattgcataaagctgaggcacacgagtaaaataaacttttgcctcctcggcagttaactgccgaagaattcataaaccggctgc 19440290  T
Q  247 agttaactgcc 257  Q
    |||||||||||    
T  19440291 agttaactgcc 19440301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 42804402 - 42804500
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||||||||||||| ||||||||| |||||||||||||||| | | ||||| ||||||| || ||||||||| ||||||  | ||||||||||||||    
T  42804402 gacacatttcataaggctgaggcacacaagtaaaatacactttagccccctcgatagttaactgccgaggaattaaaaaactagttgcagttaactgcc 42804500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 43571824 - 43571713
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||| ||||||||| ||| ||| ||||||||||   ||||| | |||||| |||||| ||  |||||||||||||  ||||||    
T  43571824 gaaaattgttgttgacacattacataaggttcaggtacacaagtaaaatatgtttttgccccctcggcagttaactgctgaggaattcaaaagtcggctg 43571725  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  43571724 cagttaactgcc 43571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 66835 - 66942
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    ||||| |||||| ||||||||| |||||| |||| ||||  |||||||||| |||||| | |||||| |||||| || ||||| |||||||| |||||||    
T  66835 gaaaactgttgttgacacatttgataaggctgagacacacgagtaaaatacgcttttgccccctcggcagttaactgccgaggtattcaaaa-ccggctg 66933  T
Q  246 cagttaact 254  Q
    |||||||||    
T  66934 cagttaact 66942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 19454461 - 19454353
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| || ||||| |||||||||||| ||||  |||||||||| |||||| |  ||||| |||||| ||  |||||||||||||| ||| |||||    
T  19454461 aattgttgttgatacattgcataaggttgagacacacgagtaaaatacgcttttgccctctcggcagttaactgctgaggaattcaaaaatcggttgcag 19454362  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  19454361 ttaactgcc 19454353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 42756097 - 42756204
Alignment:
Q  150 attgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagt 249  Q
    |||||||| ||||||||| |||||||| ||  |||| ||||||||||  ||||| | |||| | |||||| |||||||||||| |||| |||| ||||||    
T  42756097 attgttgttgacacatttgataaggttcagaaacatgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaattaaaaatccggttgcagt 42756196  T
Q  250 taactgcc 257  Q
    ||||||||    
T  42756197 taactgcc 42756204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 42807738 - 42807655
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaa 230  Q
    |||||||||||  ||||||||||||||| ||| ||||| || ||||||||| ||||| |||||||| |||||| ||||||||||    
T  42807738 aaaattgttgttaacacatttcataaggctgatgcacacaaataaaatacatttttgcctcctcggcagttaactgtcgaggaa 42807655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 49219914 - 49219819
Alignment:
Q  162 acatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||| |||||| || | ||||  ||||||||||| ||||| ||||||||||||||| || |||||||||  ||| |||||||||||||||||||    
T  49219914 acatttgataaggctgtgccacactagtaaaatacaattttgcctcctcggtagttaactgccgaggaattagaaatccggctgcagttaactgcc 49219819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 55207799 - 55207691
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||| ||| ||||||||||||| || ||||  |||  |||||||||| |||||| | | |||| |||||| || ||| ||||||||||||||| |||||    
T  55207799 aattgatgttgacacatttcatatggctgagaaacacgagtaaaatactcttttgccccatcggcagttaactgccgaagaattcaaaaaccggttgcag 55207700  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  55207699 ttaactgcc 55207691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 52570701 - 52570597
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    |||||| || |||||||| ||||||| |||||||||  | ||||||||  |||| || |||||| |||||| || ||| |||||||||||||| ||||||    
T  52570701 aattgtcgttgacacattgcataaggctgaggcacacgattaaaatacgttttt-tcccctcggcagttaactgccgaagaattcaaaaaccgactgcag 52570603  T
Q  249 ttaact 254  Q
    ||||||    
T  52570602 ttaact 52570597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 34691600 - 34691668
Alignment:
Q  187 agtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactg 255  Q
    ||||||||||| ||||| |||||||| |||||| || ||||||| | |||| |||||||||||||||||    
T  34691600 agtaaaatacaattttgcctcctcggcagttaactgccgaggaaataaaaatccggctgcagttaactg 34691668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 41802939 - 41803043
Alignment:
Q  153 gttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaa 252  Q
    ||||||||||||||||||| || ||||  | |  ||||||||||  ||||| |  ||||| |||||| || ||| ||||| |||||||||||||||||||    
T  41802939 gttgtcgacacatttcatatggctgagaaatacgagtaaaatacgtttttgcccactcggcagttaactgccgaagaatttaaaaaccggctgcagttaa 41803038  T
Q  253 ctgcc 257  Q
    |||||    
T  41803039 ctgcc 41803043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 7839577 - 7839530
Alignment:
Q  207 cctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||    
T  7839577 cctcggcagtaaactgtcgaggaattcaaaaaccggctgcagttaact 7839530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 7245098 - 7245135
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatac 196  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7245098 gacacatttcataaggttgaggcacacaagtaaaatac 7245135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 48892195 - 48892153
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  48892195 agttaactgtcgaggaatt-aaaaaccggctgcagttaactgcc 48892153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 6506077 - 6505979
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||  |||||| |||||||||  |||||  |||  ||||||| |||| | |||||| || | ||||||| | ||||||||||||||||||||||    
T  6506077 gacacattgtataaggctgaggcacacgagtaatttacgtttttgtcccctcagaagttaactgccaaggaattaagaaaccggctgcagttaactgcc 6505979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 20366194 - 20366236
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaactgc 256  Q
    |||||| || ||||||||||||||||| |||||||||||||||    
T  20366194 agttaactgccgaggaattcaaaaaccagctgcagttaactgc 20366236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 41577012 - 41577118
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||||||||||| ||||  | | || ||||||||  ||||| ||  |||  |||||| |||||| ||||| ||||| ||| |||||    
T  41577012 aattgttgttgacacatttcataaggctgagaaatacaaataaaatacgtttttgccttttcgacagttaactgtcgatgaattaaaaaatcggttgcag 41577111  T
Q  249 ttaactg 255  Q
    |||||||    
T  41577112 ttaactg 41577118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 30252563 - 30252611
Alignment:
Q  209 tcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||||| |||||||||| |  ||||||||||| |||||||||||    
T  30252563 tcggtagttaactgtcgaggaaatacaaaaccggctgtagttaactgcc 30252611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 55267378 - 55267486
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||||| || ||||||| |||| ||||  |||||  |||  ||||| | |||||  |||||| || ||| ||||||||||| |||||||||    
T  55267378 aattgttgttgacacgttgcataaggctgagacacacgagtaatttacgtttttgccccctcgacagttaactgccgaagaattcaaaaatcggctgcag 55267477  T
Q  249 ttaactgcc 257  Q
    |||| ||||    
T  55267478 ttaattgcc 55267486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 18538475 - 18538363
Alignment:
Q  145 ggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggct 244  Q
    ||||||||||||| |||||||||||| ||| ||||||||| |||||||||||  ||||| | |||||| |||||||||||||||||||||||||||||||    
T  18538475 ggaaaattgttgttgacacatttcattaggctgaggcacacaagtaaaatacgattttgccccctcggcagttaattgtcgaggaattcaaaaaccggct 18538376  T
Q  245 gcagttaactgcc 257  Q
    |||||||||||||    
T  18538375 gcagttaactgcc 18538363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 18310157 - 18310049
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| ||||||||| |||||||||||  ||||| |||||| | |||||| ||||||||||||||| ||||| ||||||    
T  18310157 aattgttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgcctcctcagcagttaactgtcgaggaattcaataaccgactgcag 18310058  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  18310057 ttaactgcc 18310049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 34682190 - 34682302
Alignment:
Q  145 ggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggct 244  Q
    ||||||||||||| |||||||||||||||| |||||  || ||||||||||| ||||||   ||| |  |||||| ||||||||||||||||||||||||    
T  34682190 ggaaaattgttgttgacacatttcataaggctgaggttcacaagtaaaatacgcttttgctcccttgacagttaactgtcgaggaattcaaaaaccggct 34682289  T
Q  245 gcagttaactgcc 257  Q
    |||||||||||||    
T  34682290 gcagttaactgcc 34682302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 41201672 - 41201773
Alignment:
Q  156 gtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactg 255  Q
    ||||||||||| ||||||| |||||||||  ||||||||||  |||||||  ||||  | |||||||||||||||||||| |||||||||||||||||||    
T  41201672 gtcgacacattacataaggctgaggcacacgagtaaaatacgattttgtcctctcgacaattaattgtcgaggaattcaataaccggctgcagttaactg 41201771  T
Q  256 cc 257  Q
    ||    
T  41201772 cc 41201773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 1398538 - 1398645
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcc-tcggtagttaattgtcgaggaattcaaaaaccggct 244  Q
    |||||||||||| |||||||| |||||||||||| |||| |||||||||||||||||| |||| |||  |||||| || |||||||||||| |||||| |    
T  1398538 gaaaattgttgttgacacattacataaggttgagacacagaagtaaaatacacttttg-ctccttcgacagttaactgccgaggaattcaataaccggtt 1398636  T
Q  245 gcagttaac 253  Q
    |||||||||    
T  1398637 gcagttaac 1398645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 25500028 - 25499915
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggc--acataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggc 243  Q
    |||||||| ||| |||||||| ||||||| ||||||  ||| ||||||||||| |||||| | |||||| |||||| | ||||||||||||||||||||     
T  25500028 gaaaattggtgttgacacattacataaggctgaggcgaacacaagtaaaatacgcttttgccccctcggcagttaactatcgaggaattcaaaaaccggt 25499929  T
Q  244 tgcagttaactgcc 257  Q
    ||| ||||||||||    
T  25499928 tgcggttaactgcc 25499915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 24053114 - 24053225
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| ||||||| | ||||||| ||| ||||||| ||||||||  ||||||   ||||| |||||| || |||| ||||||||||||| |||    
T  24053114 gaaaattgttgttgacacatatgataaggtcgagacacataaataaaatacgtttttgttctctcggcagttaaatgccgagtaattcaaaaaccgtctg 24053213  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  24053214 cagttaactgcc 24053225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 33995287 - 33995176
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||| ||||||| |||| |||| |||||||||||||||| |||||||||||| |||| || |||||  |||||| || |||| |||||||||| ||| ||    
T  33995287 gaaagttgttgttgacatattttataaggttgaggcacacaagtaaaatacaattttatcccctcgacagttaactgccgagaaattcaaaaatcggatg 33995188  T
Q  246 cagttaactgcc 257  Q
    || |||||||||    
T  33995187 caattaactgcc 33995176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 3603284 - 3603179
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||  |||||   |||||  |||||| || ||| |||||||| ||| ||||||||    
T  3603284 aattgttgttgacacattgcataaggctgaggcacataagtaaaatacgtttttgctccctcgacagttaactgccgaagaattcaataactggctgcag 3603185  T
Q  249 ttaact 254  Q
    ||||||    
T  3603184 ttaact 3603179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 20192290 - 20192398
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||||  ||||| | | |||  |||||| ||  || |||||||| || |||||||||    
T  20192290 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccttcgtcagttaactgctgaagaattcaataatcggctgcag 20192389  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  20192390 ttaactgcc 20192398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 20200284 - 20200176
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| ||||||||| || ||||||||  ||||| | | |||| |||||| |||| || ||||||| ||||  ||||||    
T  20200284 aattgttgttgacacattgcataaggctgaggcacacaaataaaatacgtttttgccccatcggcagttaactgtcaagaaattcaataaccaactgcag 20200185  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  20200184 ttaactgcc 20200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 19228785 - 19228674
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| ||||||||| |||||| |||| |||| |||||||||||     || | |||||| |||||| || ||| ||||| ||||||||| ||    
T  19228785 gaaaattgttgttgacacatttgataaggctgagacacacaagtaaaatacgtaaatgccccctcggcagttaactgccgatgaattaaaaaaccggatg 19228686  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  19228685 cagttaactgcc 19228674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 33993214 - 33993325
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||| | | |||||||||||||||||||||  | |  ||||||||||  ||||| | |||||| |||||| || |||  |||||||||||||||||    
T  33993214 gaaaattgcttttgacacatttcataaggttgagaaatacgagtaaaatacgtttttgccccctcggaagttaactgccgaaaaattcaaaaaccggctg 33993313  T
Q  246 cagttaactgcc 257  Q
     |||||||||||    
T  33993314 tagttaactgcc 33993325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 34124059 - 34123963
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||| ||||||||| | ||||  ||||||||||  ||||| | |||||| |||||| ||||||| ||||  ||| |||||||||||||||||||    
T  34124059 cacatttaataaggttgtgccacaccagtaaaatacgattttgccccctcggcagttaactgtcgagaaatttgaaatccggctgcagttaactgcc 34123963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 34122458 - 34122569
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    ||||||||||||   || |||| ||||||||| | ||||| ||||||||||  ||||| | | |||| |||||| || |||||||||  ||| |||||||    
T  34122458 gaaaattgttgttcccatatttgataaggttgtgccacattagtaaaatacgattttgccccttcggcagttaactgccgaggaatttgaaatccggctg 34122557  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  34122558 cagttaactgcc 34122569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 1397488 - 1397378
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgc 246  Q
    |||||||||||   ||||||| ||||||||| ||||||  |||||  |||| ||||| | |||||| |||||| ||  ||||||||  ||| ||||||||    
T  1397488 aaaattgttgttcccacatttgataaggttgtggcacacgagtaatttacatttttgccccctcggcagttaactgctgaggaattagaaatccggctgc 1397389  T
Q  247 agttaactgcc 257  Q
    |||||||||||    
T  1397388 agttaactgcc 1397378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 257
Target Start/End: Original strand, 17965824 - 17965894
Alignment:
Q  187 agtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||||  |||| || |||||| ||||||||||||||||||| ||||  || |||||||||||||||    
T  17965824 agtaaaatacgattttatcccctcggcagttaattgtcgaggaattaaaaattcgactgcagttaactgcc 17965894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 3600273 - 3600382
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaatt-caaaaaccggctgca 247  Q
    ||||||||| |||||||||||||| |||||| |||| ||||||||||   ||||| | |||||| |||||| || |||  ||||  || |||| ||||||    
T  3600273 aattgttgttgacacatttcataaagttgagccacacaagtaaaatatgtttttgccccctcggcagttaactgccgaataattataataaccagctgca 3600372  T
Q  248 gttaactgcc 257  Q
    ||||||||||    
T  3600373 gttaactgcc 3600382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 7801073 - 7801020
Alignment:
Q  199 ttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaa 252  Q
    |||||||  |||||||||||| ||||| |||||||||||| |||||||||||||    
T  7801073 ttttgtccactcggtagttaactgtcgtggaattcaaaaatcggctgcagttaa 7801020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 1401484 - 1401428
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacactttt 202  Q
    ||||| |||||| |||||||||||||||| |||| |||| ||||||||||| |||||    
T  1401484 gaaaactgttgttgacacatttcataaggctgagacacacaagtaaaatacgctttt 1401428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 31094500 - 31094607
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| || ||||| ||||||| | |||||||  |||||  |||| ||||| | ||||||||||||| ||||| |||| |   |||||||||||||    
T  31094500 aattgttgttgatacattgcataaggcttaggcacacgagtaatttacatttttgccccctcggtagttaactgtcggggaaat-tgaaaccggctgcag 31094598  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  31094599 ttaactgcc 31094607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 256
Target Start/End: Original strand, 24050036 - 24050071
Alignment:
Q  221 tgtcgaggaattcaaaaaccggctgcagttaactgc 256  Q
    ||||||||||||||||||||||||||| ||||||||    
T  24050036 tgtcgaggaattcaaaaaccggctgcacttaactgc 24050071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 25497517 - 25497556
Alignment:
Q  218 aattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  25497517 aattgtcgaggaattcaaaaattggctgcagttaactgcc 25497556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 38968045 - 38968140
Alignment:
Q  162 acatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||||||| |||   |||||||||||||||  |||||   | ||||||||||| |  ||||||||  |||| |||||||||||||||||||    
T  38968045 acatttcataaggctgaaaaacataagtaaaatacgtttttgatccttcggtagttaactaccgaggaataaaaaatccggctgcagttaactgcc 38968140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 35567167 - 35567058
Alignment:
Q  145 ggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttg-tctcctcggtagttaattgtcgaggaattcaaaaaccggc 243  Q
    |||||||||  || |||||||||||| ||| ||||||||| ||||||||||   ||||| ||| ||||| |||||| |||||||||||   || |||||     
T  35567167 ggaaaattgccgttgacacatttcatcaggctgaggcacacaagtaaaatatgtttttgctct-ctcggcagttaactgtcgaggaatgttaataccggt 35567069  T
Q  244 tgcagttaact 254  Q
    |||||||||||    
T  35567068 tgcagttaact 35567058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 13568151 - 13568103
Alignment:
Q  209 tcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||||| || |||||||||  ||| |||||||||||||||||||    
T  13568151 tcggtagttaactgccgaggaatttgaaatccggctgcagttaactgcc 13568103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 18307251 - 18307299
Alignment:
Q  209 tcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||| |||||| |||||||||||| ||||| |||||| |||||||||||    
T  18307251 tcggcagttaactgtcgaggaattaaaaaatcggctgtagttaactgcc 18307299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 25877559 - 25877666
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| |||||||||| | ||||  ||||||||||  ||||  | | |||| | |||| || |||||||||| ||| |||||||||     
T  25877559 aattgttgttgacacattgcataaggttgtgtcacacgagtaaaatacgtttttaccacttcggcaattaaatgccgaggaattcgaaa-ccggctgcaa 25877657  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  25877658 ttaactgcc 25877666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 13479660 - 13479770
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||| | ||||||||||||| ||||| |||||||||||||| ||||    
T  13479660 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgccccctcggtagttaactgtcggggaattcaaaaaccagctg 13479759  T
Q  246 cagttaactgc 256  Q
    |||||||||||    
T  13479760 cagttaactgc 13479770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 13404768 - 13404660
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    |||||||||  ||||||| |||||||  |||||||| ||||||||||| | |||| | ||||||||||||| ||||||||||||||| |||| |||||||    
T  13404768 aattgttgttaacacattgcataaggccgaggcacacaagtaaaatacgcgtttgccccctcggtagttaactgtcgaggaattcaataacctgctgcag 13404669  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  13404668 ttaactgcc 13404660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 31605154 - 31605061
Alignment:
Q  46 cccccatgtttgg-ggccagcagctgctttcattggttggaacctcaatcgtgagttcttcgctataacatccttccggatatatggcattgct 138  Q
    ||||||||||| | |||||||||| ||||||||||||||||| |||||| ||||||||||| |||||| ||||||| |||||||| ||||||||    
T  31605154 cccccatgttttgtggccagcagcggctttcattggttggaatctcaattgtgagttcttcactataagatccttcgggatatatagcattgct 31605061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 29286166 - 29286274
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||  |||  ||||| | ||||||||||||| || ||||||| | | ||||||| |||||    
T  29286166 aattgttgttgacacattgcataaggttgaggcacacaagtaatttacgtttttgccccctcggtagttaactgccgaggaaataagaaaccggttgcag 29286265  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  29286266 ttaactgcc 29286274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 35021399 - 35021291
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    |||| |||| ||||||||| ||| || ||||  |||  ||||||||||||||||| | |||||| |||||| ||  || |||||||||||||||||||||    
T  35021399 aattattgttgacacattttatatggctgagaaacacgagtaaaatacacttttgccccctcggcagttaaatgcggaagaattcaaaaaccggctgcag 35021300  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  35021299 ttaactgcc 35021291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 23958824 - 23958935
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| ||||||| | |||||| |||| |||  || ||||||||  ||||||| |||||| |||||| || |||| ||||| |||||||||||    
T  23958824 gaaaattgttgttgacacatatgataaggctgagacacccaactaaaatacgtttttgtcccctcggcagttaactgccgagaaattccaaaaccggctg 23958923  T
Q  246 cagttaactgcc 257  Q
    ||||||| ||||    
T  23958924 cagttaaatgcc 23958935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 255
Target Start/End: Complemental strand, 32643660 - 32643551
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    ||||||||||||  ||||||||||||||||||| || || |||||||||||     || |||||||| |||||| || | ||||||| |||| |||||||    
T  32643660 gaaaattgttgttcacacatttcataaggttgaagcccacaagtaaaatacgtaaatgcctcctcggcagttaactgccaaggaattaaaaatccggctg 32643561  T
Q  246 cagttaactg 255  Q
    ||||||||||    
T  32643560 cagttaactg 32643551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 7537193 - 7537240
Alignment:
Q  207 cctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  7537193 cctcggcagttaattgtcgaggaattaaaaaaccggctgcagttaact 7537240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 12784074 - 12783991
Alignment:
Q  168 cataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagtta 251  Q
    ||||||| ||||||||| ||||||||||| |||||| | | |||| |||||| || ||| |||||||| |||||||||||||||    
T  12784074 cataaggctgaggcacacaagtaaaatacgcttttgccccatcggcagttaactgccgatgaattcaataaccggctgcagtta 12783991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 13401423 - 13401530
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||| ||| ||||||||| |||||||||||  |||  ||| |||||  |||||| | |||||| |||||| || ||||||||| ||||| |||||||||    
T  13401423 aattgatgttgacacattttataaggttgagtaacacgagttaaatatgcttttgccccctcggcagttaactgccgaggaattaaaaaatcggctgcag 13401522  T
Q  249 ttaactgc 256  Q
    ||||||||    
T  13401523 ttaactgc 13401530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 18001148 - 18001258
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||||||      || |   |||| |||||| ||| |||||||| ||||||||||||    
T  18001148 gaaaattgttgttgacacatttcataaggttgaggtacacaagtaaaatatgtaaatgccctatcggcagttaactgttgaggaatt-aaaaaccggctg 18001246  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  18001247 cagttaactgcc 18001258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 23986099 - 23986009
Alignment:
Q  167 tcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||||| |||| |||| |||||||||||  ||||| | ||| || |||||| || |||| |||||||||||||| ||||||||||||||    
T  23986099 tcataaggctgagacacacaagtaaaatacgtttttgcccccttggcagttaactgccgagaaattcaaaaaccggttgcagttaactgcc 23986009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 32026039 - 32026089
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatac 196  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  32026039 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatac 32026089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 25141215 - 25141107
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| |||||||||  | |||  || | |||||||   |||| |||||| |||||||||||||||| ||| ||| |||    
T  25141215 aattgttgttgacacattgcataaggctgaggcacacgaataatttatatttttgtccattcggcagttaactgtcgaggaattcaaataccagctacag 25141116  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  25141115 ttaactgcc 25141107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 6320625 - 6320531
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggc 243  Q
    ||||||||| |||| |||| |||||||||||  |||  | |||||||   |||||||||||||| |||||| |||||||||||| |||| |||||    
T  6320625 aattgttgttgacatatttgataaggttgagaaacacgaataaaatatgtttttgtctcctcggcagttaactgtcgaggaattaaaaatccggc 6320531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 18605982 - 18606089
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||||||||  || ||| |||||||||  ||||||||||  ||||| | ||||||||||||| || | |||||||   | |||||||||||    
T  18605982 aattgttgttgacacattgtatgaggctgaggcacacgagtaaaatacgtttttgccccctcggtagttaactgcctaggaatt-tgacaccggctgcag 18606080  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  18606081 ttaactgcc 18606089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 17996539 - 17996589
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatac 196  Q
    |||||||||||| ||||||||| ||||||| |||||||| | |||||||||    
T  17996539 gaaaattgttgttgacacattttataaggtcgaggcacacatgtaaaatac 17996589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 7361128 - 7361236
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||| ||| |||||||| ||||||| || ||||||  |||||  |||  ||||||| | |||| | |||| ||  ||||| || |||||||||||||||    
T  7361128 aattgctgttgacacattgcataaggctgtggcacacgagtaatttacgtttttgtcccgtcggcaattaactgctgaggattttaaaaaccggctgcag 7361227  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  7361228 ttaactgcc 7361236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 34801484 - 34801544
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaa 219  Q
    |||||||| ||||| | ||||| ||| |||||||||||  |||||||||||||| ||||||    
T  34801484 gacacattacataatgctgaggaacacaagtaaaatacgtttttgtctcctcggcagttaa 34801544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 29700441 - 29700330
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||  |||||| ||  ||||||||||| |||||||||    
T  29700441 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgtctcctcgacagttaactgctgaggaattcaataaccggctg 29700342  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  29700341 cagttaactgcc 29700330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 33383752 - 33383850
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||| || |||||||||||||||||||||| || |||||||| |||||||||||||||    
T  33383752 gacacatttcataaggtttaggcacacaagtaaaatacatttttgccttctcggtagttaattgtcgaggattttaaaaaccgactgcagttaactgcc 33383850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 4768612 - 4768723
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||| ||||| |||||||||| | ||||| | |||||| |||||| || |||||||||||||| | |||||    
T  4768612 gaaaattgttgttgacacatttcataaggctgatgcacacaagtaaaatataattttgccccctcggcagttaactgccgaggaattcaaaatctggctg 4768711  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  4768712 cagttaactgcc 4768723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 955724 - 955837
Alignment:
Q  144 aggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggc 243  Q
    |||||||||| ||| |||||||||||||| ||||||||||| |||||||||||  ||||| ||| | || |||||| ||  |||||||||||||| ||||    
T  955724 aggaaaattgatgttgacacatttcataaagttgaggcacacaagtaaaatacgtttttgcctctttggcagttaactgctgaggaattcaaaaatcggc 955823  T
Q  244 tgcagttaactgcc 257  Q
    ||||||||||||||    
T  955824 tgcagttaactgcc 955837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 21472623 - 21472512
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||||  |||  ||||||||||  ||||| | |||||| |||||| || ||||||||||||||| ||||||    
T  21472623 gaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccgcctcggcagttaactgccgaggaattcaaaaatcggctg 21472524  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  21472523 cagttaactgcc 21472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 34154541 - 34154431
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||||  |||   |||||||||| ||||||| | |||| |||||| || ||||||||| ||||||||||||    
T  34154541 gaaaattgttgttgacacatttcataaggctgagaaacacgggtaaaatacatttttgtcccatcggcagttaactgccgaggaattaaaaaaccggctg 34154442  T
Q  246 cagttaactgc 256  Q
    |||||||||||    
T  34154441 cagttaactgc 34154431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 51426470 - 51426582
Alignment:
Q  145 ggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggct 244  Q
    ||||||||||||| ||||| |||||||||| | ||||||| |||||||||||  |||||||   |||  |||||| |||||||||||||||||| |||||    
T  51426470 ggaaaattgttgttgacacgtttcataaggcttaggcacacaagtaaaatacgtttttgtcctttcgacagttaactgtcgaggaattcaaaaatcggct 51426569  T
Q  245 gcagttaactgcc 257  Q
    |||||||| ||||    
T  51426570 gcagttaattgcc 51426582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 958732 - 958622
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||| ||| ||||||||| |||||| |||||||||||||||||||||  |||||||  ||||  |||||| || ||| ||||||||||||||| ||    
T  958732 gaaaattgatgttgacacattttataaggctgaggcacataagtaaaatacgtttttgtcctctcgacagttaactg-cgatgaattcaaaaaccggttg 958634  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  958633 cagttaactgcc 958622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 253
Target Start/End: Original strand, 21470838 - 21470944
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgc 246  Q
    ||||||||| |  |||||||  |||||||||||||||| |||||||||||  |||||||| ||||| |||||| |||||||| |||||||||| | ||||    
T  21470838 aaaattgttctttacacattggataaggttgaggcacacaagtaaaatacgtttttgtcttctcggcagttaactgtcgaggtattcaaaaactgactgc 21470937  T
Q  247 agttaac 253  Q
    |||||||    
T  21470938 agttaac 21470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 11494481 - 11494588
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||||||||||||| | |||| ||||  |||  ||||||||||  ||||||| |||||| | |||| ||||||||||||| ||||||||||||||    
T  11494481 aattgttgtcgacacatttgaaaagggtgagaaacacgagtaaaatacgtttttgtcccctcggcaattaactgtcgaggaattc-aaaaccggctgcag 11494579  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  11494580 ttaactgcc 11494588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 49573032 - 49572928
Alignment:
Q  153 gttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaa 252  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||  ||||| | | |||  |||||| ||||||||||||||| || |||||||||||||    
T  49573032 gttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgccccatcgacagttaactgtcgaggaattcaataatcggctgcagttaa 49572933  T
Q  253 ctgcc 257  Q
    |||||    
T  49572932 ctgcc 49572928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 37959858 - 37959748
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgc 246  Q
    ||||||||||| |||||||| ||||||| |||||||||  ||||||||||  ||||  | |||||| |||||| ||| |||||||| || |||| |||||    
T  37959858 aaaattgttgttgacacattacataaggctgaggcacacgagtaaaatacgtttttaccccctcggcagttaactgttgaggaatttaataaccagctgc 37959759  T
Q  247 agttaactgcc 257  Q
    |||||||||||    
T  37959758 agttaactgcc 37959748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 38464901 - 38464796
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||||||||||||||||| |||| |||||||||   |||||  ||||||  |||||| || ||||||||||  |||||||||||||    
T  38464901 aattgttgttgacacatttcataaggttgaggtacatgagtaaaatatgattttgcttcctcgacagttaaatgacgaggaattc-gaaaccggctgcag 38464803  T
Q  249 ttaactg 255  Q
    |||||||    
T  38464802 ttaactg 38464796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 18578618 - 18578694
Alignment:
Q  181 cacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||| |||||||||||| ||||| ||||| || |||||| |||||||||||||||||| |||||||||||| |||||    
T  18578618 cacacaagtaaaatacatttttgcctccttggcagttaactgtcgaggaattcaaaaaacggctgcagttatctgcc 18578694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 51644613 - 51644501
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggt-agttaattgtcgaggaattcaaaaaccggct 244  Q
    |||||||||||| ||||||||| || ||| |||||||||||||||||||||  ||||| |   |   | | ||||||||||||||||||||||| |||||    
T  51644613 gaaaattgttgttgacacattttattaggctgaggcacataagtaaaataccattttgccctttttatcaattaattgtcgaggaattcaaaaatcggct 51644514  T
Q  245 gcagttaactgcc 257  Q
    |||||||||||||    
T  51644513 gcagttaactgcc 51644501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 4980053 - 4979946
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| |||||||||||||||||  |||||  |||  ||||    |||||| |||||| |||||| || ||||||||||||||||||    
T  4980053 aattgttgttgacacattgcataaggttgaggcacacgagtaatttacgtttttcctccctcggcagttaactgtcgacgatttcaaaaaccggctgcag 4979954  T
Q  249 ttaactgc 256  Q
    ||||||||    
T  4979953 ttaactgc 4979946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 34151543 - 34151659
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaa-tacacttttgtctcctcgg----tagttaattgtcgaggaattcaaaaacc 240  Q
    |||||||||||| |||| |||  |||| |||||||||||||||||||| |||  ||||| ||||||||    ||||||| || |||| |||||||||| |    
T  34151543 gaaaattgttgttgacatattagataacgttgaggcacataagtaaaaatacgtttttgcctcctcggcagttagttaaatgccgagtaattcaaaaatc 34151642  T
Q  241 ggctgcagttaactgcc 257  Q
    |||||||||||||||||    
T  34151643 ggctgcagttaactgcc 34151659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 44558634 - 44558691
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttg 203  Q
    |||||||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||    
T  44558634 gaaaattgttgttgacacattacataaggctgaggcacacaagtaaaatacacttttg 44558691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 254
Target Start/End: Complemental strand, 44561469 - 44561361
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||||  |||  ||||||||||  ||||| |  |||||| ||||| || |||| || | ||||||||||||    
T  44561469 gaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgattttgccctctcggttgttaactgccgagtaaataaaaaaccggctg 44561370  T
Q  246 cagttaact 254  Q
    |||||||||    
T  44561369 cagttaact 44561361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 18581434 - 18581385
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaata 195  Q
    |||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  18581434 gaaaattgttgttgacacatttcataaggttgaggcacacaagttaaata 18581385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 24417490 - 24417446
Alignment:
Q  211 ggtagttaattgtcgaggaattcaaaaaccggctgcagttaactg 255  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  24417490 ggtagttaactgtcgagaaattcaaaaaccggctgcagttaactg 24417446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 255
Target Start/End: Original strand, 49422074 - 49422181
Alignment:
Q  143 gaggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccgg 242  Q
    |||||||||||||||  ||||||||||||||| |||| |||| || ||||||||  ||||| | | ||||     || || ||||||||| |||||||||    
T  49422074 gaggaaaattgttgtttacacatttcataaggctgagtcacacaaataaaatacgtttttgccccttcgg-----aactgccgaggaattaaaaaaccgg 49422168  T
Q  243 ctgcagttaactg 255  Q
    |||||||||||||    
T  49422169 ctgcagttaactg 49422181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 6280794 - 6280897
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| |||||||||| ||||||  |||||  |||  ||||| |  ||||| |||||| |||| | ||||| |||||||||||||||    
T  6280794 aattgttgttgacacattgcataaggttggggcacacgagtaatttacgtttttgccctctcggcagttaactgtcaaagaatttaaaaaccggctgcag 6280893  T
Q  249 ttaa 252  Q
    ||||    
T  6280894 ttaa 6280897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 17139560 - 17139669
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    ||||||||||||  |||||| |||||||||||||  ||| | |||||||||    ||||| |||||| |||||| ||||||| |||  ||||||||||||    
T  17139560 gaaaattgttgttcacacatatcataaggttgagaaacacatgtaaaatacgaaattgtc-cctcggcagttaactgtcgagaaata-aaaaaccggctg 17139657  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  17139658 cagttaactgcc 17139669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 48256701 - 48256652
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatac 196  Q
    |||||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  48256701 aaaattgttgttcacacatttcataaggctgaggcacacaagtaaaatac 48256652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 9473732 - 9473692
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  9473732 agttaattgtcgaggaattcataaatcggctgcagttaact 9473692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 37394197 - 37394293
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||| ||| ||||| | ||||  ||||||||||  ||||| ||| |||| |||||| ||||||||||||  ||| |||| ||||||||||||||    
T  37394197 cacatttgatatggttgtgccacactagtaaaatacgattttgcctcttcggcagttaactgtcgaggaatttgaaatccggatgcagttaactgcc 37394293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 50278922 - 50278826
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||| ||||||||| ||||||  |||||  |||  ||||||| |||||  |||||| |||||| |||||  ||| |||||||||||||||||||    
T  50278922 cacatttgataaggttgtggcacacgagtaatttacgtttttgtcccctcgacagttaactgtcgatgaattagaaatccggctgcagttaactgcc 50278826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 56304826 - 56304921
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||| |||||||||||  |||  ||||||||||| ||||| | | |||| |||||| |||||||||||| |||| | |||||||||||| ||||    
T  56304826 cacatttgataaggttgagaaacacgagtaaaatacatttttgcc-catcggcagttaactgtcgaggaattaaaaatctggctgcagttaattgcc 56304921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 6283573 - 6283469
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||||||||||||| |  ||||  |||  |||||||||| |||||||||    |  |||||| || ||  |||||||||||||||||||||    
T  6283573 aattgttgttgacacatttcatatgactgagaaacacgagtaaaatacgcttttgtct----gaaagttaactgccgcagaattcaaaaaccggctgcag 6283478  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  6283477 ttaactgcc 6283469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 257
Target Start/End: Complemental strand, 18581368 - 18581334
Alignment:
Q  223 tcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||||||||||||||| ||||||||||||||||    
T  18581368 tcgaggaattcaaaaaccagctgcagttaactgcc 18581334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 3450153 - 3450104
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaata 195  Q
    |||||||| ||| |||| ||||||||||| ||||||||| ||||||||||    
T  3450153 gaaaattgctgttgacatatttcataaggctgaggcacacaagtaaaata 3450104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 33051730 - 33051681
Alignment:
Q  208 ctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||| |||| |||||||||| |  |||||||||||||||||||||||    
T  33051730 ctcggtaattaagtgtcgaggaaatagaaaaccggctgcagttaactgcc 33051681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 44051228 - 44051123
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| |||||||||  |||||  |||  ||||| | | ||||  ||||| || ||||||| | | |||||||||||||    
T  44051228 aattgttgttgacacattgcataaggctgaggcacaccagtaatttacgtttttgccccatcggcggttaactgccgaggaaataagaaaccggctgcag 44051129  T
Q  249 ttaact 254  Q
    ||||||    
T  44051128 ttaact 44051123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 8109340 - 8109436
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||| |||||| ||||  |||  ||||||||||  ||||  | ||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  8109340 cacatttgataaggctgagaaacacgagtaaaatacgattttacccccttggtagttaactgtcgaggaattaaatatccggctacagttaactgcc 8109436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 8e-33; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 36908512 - 36908623
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||| ||| ||||||||| |||||| ||||||||| |||||||||||| ||||| |||||||| |||||| |||||| ||||||||||||||||||    
T  36908512 gaaaattgatgttgacacattttataaggatgaggcacacaagtaaaatacatttttgcctcctcggcagttaactgtcgaagaattcaaaaaccggctg 36908611  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  36908612 cagttaactgcc 36908623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 41804172 - 41804061
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| ||||||||| |||||| ||||||||| ||||||||||| |||||| | | |||| |||||| || |||||||||||||||||| |||    
T  41804172 gaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgcttttgccccttcggcagttaactgccgaggaattcaaaaaccgactg 41804073  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  41804072 cagttaactgcc 41804061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 46973132 - 46973249
Alignment:
Q  140 cttgaggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaac 239  Q
    ||||| |||||||||||| |||||||||||| ||| |||| |||| |||||||||||  ||||| | ||| || |||||| || ||||||||||||||||    
T  46973132 cttgaagaaaattgttgttgacacatttcattaggctgagacacacaagtaaaatacgattttgcccccttggcagttaactgccgaggaattcaaaaac 46973231  T
Q  240 cggctgcagttaactgcc 257  Q
    ||||||||||||||||||    
T  46973232 cggctgcagttaactgcc 46973249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 257
Target Start/End: Original strand, 26633465 - 26633572
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgc 246  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| | |||||||   ||| |  ||| ||||||||||||||| |||    
T  26633465 aaaattgttgttgacacatttcataaggttgaggcacacaagtaaaatacgcttttgccccctcggt---taactaccgaagaattcaaaaaccggttgc 26633561  T
Q  247 agttaactgcc 257  Q
    |||||||||||    
T  26633562 agttaactgcc 26633572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 13173770 - 13173876
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||||||  ||||| | |||||| |||||| || |  |||||||||||||||||||    
T  13173770 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatactattttgccccctcggcagttaactg-ctgggaattcaaaaaccggctg 13173868  T
Q  246 cagttaac 253  Q
    ||||||||    
T  13173869 cagttaac 13173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 19053993 - 19054101
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||||  |||  ||||||||||  ||||| | |||||  |||||| || ||||||||||||||||||||||    
T  19053993 gaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccccctcgacagttaactgccgaggaattcaaaaaccggctg 19054092  T
Q  246 cagttaact 254  Q
    |||||||||    
T  19054093 cagttaact 19054101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 38689866 - 38689976
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||| ||||| | || | ||||| |||||||||| |||||  | ||||||||||||| |||||||||||||  ||||||||||    
T  38689866 gaaaattgttgttgacacattgcataaagctgtgtcacatgagtaaaatacgcttttaccccctcggtagttaaatgtcgaggaattc-gaaaccggctg 38689964  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  38689965 cagttaactgcc 38689976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 35521548 - 35521654
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| ||||||||| |||||| ||||||||| |||||||||||  ||||| |  ||||| |||||| || ||||||| | ||||||||||||    
T  35521548 gaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaaataaaaaaccggctg 35521647  T
Q  246 cagttaa 252  Q
    |||||||    
T  35521648 cagttaa 35521654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 4515960 - 4516076
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtag-----ttaattgtcgaggaattcaaaaacc 240  Q
    |||||||| | | |||||||||||| ||| ||||||||| |||||||||||  ||||||| |||||| ||     |||| || |||||||||||||||||    
T  4515960 gaaaattgcttttgacacatttcattagggtgaggcacacaagtaaaatacgattttgtcccctcggcagggcagttaactgccgaggaattcaaaaacc 4516059  T
Q  241 ggctgcagttaactgcc 257  Q
    |||||||||||||||||    
T  4516060 ggctgcagttaactgcc 4516076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 35527139 - 35527043
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactg 255  Q
    |||||||||||||||| ||||||||| |||||||||||  ||||| || || || ||||||||| ||| ||| |||||||| |||||||||||||||    
T  35527139 gacacatttcataaggctgaggcacacaagtaaaatacgtttttgccttcttggcagttaattgccgaagaaatcaaaaacaggctgcagttaactg 35527043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 46141719 - 46141827
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||| ||| ||||||| ||||| ||| |||||||||||  ||||| |  ||||| |||||| || |||||||||||| ||||||||||||    
T  46141719 aattgttgttgacatattgcataaggctgaggtacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaattcaataaccggctgcag 46141818  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  46141819 ttaactgcc 46141827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 21944521 - 21944414
Alignment:
Q  144 aggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggc 243  Q
    |||||||||||||| ||||||| |||||||| || | ||||||| ||||||||  |||| || ||||| ||| ||| ||||||| |||| ||||||||||    
T  21944521 aggaaaattgttgttgacacatatcataaggctgggacacataaataaaatacgtttttatcccctcgatagataactgtcgagaaatttaaaaaccggc 21944422  T
Q  244 tgcagtta 251  Q
    ||||||||    
T  21944421 tgcagtta 21944414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 7965976 - 7966049
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtc-tcctcggtagttaa 219  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||    
T  7965976 aaaattgttgttgacatatttcataaggttgaggcacaaaagtaaaatacatttttgtcttcctctgtagttaa 7966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 36072304 - 36072414
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||||| ||||||| || ||||||||  |||||| ||  ||||| |||  || |||| |||| ||||| ||||||    
T  36072304 gaaaattgttgttgacacatttcataaggttaaggcacacaaataaaatacgattttgt-tctccggtaattagctgccgagaaattgaaaaatcggctg 36072402  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  36072403 cagttaactgcc 36072414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 36076696 - 36076586
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||| ||| |||||||||||||||| ||||  ||| |||||||||||  ||||  | | |||||||||||    ||||||||||||||||||||||    
T  36076696 gaaaattgctgttgacacatttcataaggctgagaaacacaagtaaaatacg-ttttaccccttcggtagttaaccaccgaggaattcaaaaaccggctg 36076598  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  36076597 cagttaactgcc 36076586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 6437675 - 6437570
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||| | ||||||||| ||||||||||| |||||| |  ||||| |||||| || ||||||| |||| || || ||||||    
T  6437675 aattgttgttgacacattgcataaagctgaggcacacaagtaaaatacgcttttgccctctcggcagttaactgccgaggaagtcaataatcgactgcag 6437576  T
Q  249 ttaact 254  Q
    ||||||    
T  6437575 ttaact 6437570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 25040202 - 25040109
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaa 252  Q
    |||||||||||||| |  |||||||| |||||||||||| ||||||| | |||| |||||| ||||||| ||||  |||||||||| |||||||    
T  25040202 gacacatttcataaagccgaggcacacaagtaaaatacaattttgtcccttcggcagttaactgtcgagaaattttaaaaccggcttcagttaa 25040109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 7981269 - 7981213
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacactttt 202  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||||||| ||||    
T  7981269 gaaaattgttgttgacacatttcataaggttgaggaacacaagtaaaatacaatttt 7981213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 29261349 - 29261459
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| ||||| ||||||||||  || ||||| |||||||||||  ||||| |||||||| |||||| ||| ||| ||||  |||| ||||||    
T  29261349 gaaaattgttgttgacacgtttcataaggc-gatgcacagaagtaaaatacgtttttgcctcctcggcagttaactgtagagaaattgtaaaatcggctg 29261447  T
Q  246 cagttaactgcc 257  Q
    || |||||||||    
T  29261448 caattaactgcc 29261459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 14172047 - 14172156
Alignment:
Q  145 ggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggct 244  Q
    ||||||||||||| |||||||| ||||||| ||| ||||| ||||||||||| |||||| | |||||| | |||  |  ||||| ||| ||||| |||||    
T  14172047 ggaaaattgttgttgacacattccataaggctgaagcacacaagtaaaatacgcttttgccccctcggcacttagctaccgagggatttaaaaatcggct 14172146  T
Q  245 gcagttaact 254  Q
    ||| ||||||    
T  14172147 gcaattaact 14172156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 36911803 - 36911698
Alignment:
Q  150 attgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagt 249  Q
    |||||||| |||||||||||||||| ||||||  |||||||||||||  |||||| ||||||| |||  | || ||| ||||||||||| || ||| |||    
T  36911803 attgttgttgacacatttcataaggctgaggcggataagtaaaatacgtttttgtttcctcggcagt--actgccgaagaattcaaaaatcgactgtagt 36911706  T
Q  250 taactgcc 257  Q
    ||| ||||    
T  36911705 taattgcc 36911698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 49927649 - 49927541
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||||||||||||| ||  |||  |||  ||||||||||  ||||||| |||||| |||||| || ||| ||||| |||||||||||  ||    
T  49927649 aattgttgttgacacatttcatatggccgagaaacacgagtaaaatacgtttttgtcccctcggcagttaactgccgaagaatttaaaaaccggctatag 49927550  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  49927549 ttaactgcc 49927541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 18975256 - 18975149
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||||||||  |||| | ||||| ||| |||||||||||  ||||| | ||||||  ||||| |||||||||||| || ||| || |||||    
T  18975256 aattgttgttgacacattgtataaagctgaggtacacaagtaaaatacgtttttgccccctcggcggttaactgtcgaggaatttaataactggttgcag 18975157  T
Q  249 ttaactgc 256  Q
    ||||||||    
T  18975156 ttaactgc 18975149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 27115894 - 27115851
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  27115894 agttaattgccgaggaatttaaaaaccggctgcagttaactgcc 27115851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 19495017 - 19495111
Alignment:
Q  160 acacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||| |||||||| |||| ||||  ||||||||||||||||| | |||||  |||||| | || || ||||||||| |||||||||||||||||||    
T  19495017 acacatgtcataaggctgagacaca--agtaaaatacacttttgcc-cctcgacagttaactatcaagaaattcaaaatccggctgcagttaactgcc 19495111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 8460232 - 8460125
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||| ||| ||||||||  |||||| |||||||||| ||||| ||||  ||||||| |||||||||||||    |||||||||   ||| |||||||||    
T  8460232 aattgctgttgacacattctataaggctgaggcacatgagtaatatacgtttttgtcccctcggtagttaacaaccgaggaatt-tgaaatcggctgcag 8460134  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  8460133 ttaactgcc 8460125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 253
Target Start/End: Original strand, 13972001 - 13972103
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||||||||||| ||||  ||| |||||||||||  ||||| | | |||| |||| | || ||||||||| |||||| ||||||||    
T  13972001 aattgttgttgacacatttcataaggctgagaaacacaagtaaaatacgtttttgccccttcggcagtt-actgccgaggaatt-aaaaactggctgcag 13972098  T
Q  249 ttaac 253  Q
    |||||    
T  13972099 ttaac 13972103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 14174949 - 14174913
Alignment:
Q  221 tgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||||||||||||||| ||||||||||||||||||    
T  14174949 tgtcgaggaattcaaaaatcggctgcagttaactgcc 14174913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 27485008 - 27485104
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||| |||||| ||||  |||  ||||||||||  ||||| | |||||| |||||| || | ||||||| |||| |||||||||||||||||||    
T  27485008 cacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgcctaggaattaaaaatccggctgcagttaactgcc 27485104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 45943797 - 45943757
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  45943797 agttaattgtcgaggaattcataaaccggctgtagttaact 45943757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 256
Target Start/End: Complemental strand, 51666778 - 51666668
Alignment:
Q  145 ggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggct 244  Q
    ||||||||| ||| |||||||| ||||| | || | ||||  |||||||||| |||||| | |||||| |||||| || |||| ||||| ||| | ||||    
T  51666778 ggaaaattgatgttgacacattgcataaagctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgagtaattcgaaatc-ggct 51666680  T
Q  245 gcagttaactgc 256  Q
    ||||||||||||    
T  51666679 gcagttaactgc 51666668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 30910081 - 30910031
Alignment:
Q  207 cctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||| |||||| ||||||||||||  ||| |||||||||||||||||||    
T  30910081 cctcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgcc 30910031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 41453833 - 41453883
Alignment:
Q  207 cctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||||||| || |||||||||  ||| |||||||||||||||||||    
T  41453833 cctcggtagttaactgccgaggaatttgaaatccggctgcagttaactgcc 41453883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 42570077 - 42570123
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaa 193  Q
    ||||||||||| ||||| |||||||||| ||||||||| ||||||||    
T  42570077 aaaattgttgttgacacgtttcataaggctgaggcacacaagtaaaa 42570123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 179
Target Start/End: Complemental strand, 1656223 - 1656190
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgag 179  Q
    |||||||||||| |||||||||||||||||||||    
T  1656223 gaaaattgttgttgacacatttcataaggttgag 1656190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 51337584 - 51337543
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaactg 255  Q
    |||||| || ||||||||| ||||||||||||||||||||||    
T  51337584 agttaactgccgaggaattaaaaaaccggctgcagttaactg 51337543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 1654750 - 1654810
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaa 219  Q
    |||||||||||||||| ||||||||| |||| ||||||| |||| ||  ||||| ||||||    
T  1654750 gacacatttcataaggctgaggcacaaaagtgaaatacaattttatcctctcggcagttaa 1654810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 6562277 - 6562189
Alignment:
Q  169 ataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||| | ||||  ||||||||||  ||||  | |||||| |||||| || |||||||||  ||| |||||||||||||||||||    
T  6562277 ataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgcc 6562189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 23276244 - 23276136
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    |||||||||  || ||||| |||||| ||||  |||  ||||||||||  ||||| | |||||| |||||| ||  |||||||| |||| |||||| |||    
T  23276244 aattgttgttcacgcatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgctgaggaattaaaaatccggctacag 23276145  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  23276144 ttaactgcc 23276136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 23359436 - 23359380
Alignment:
Q  198 cttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    |||||| | |||||| ||||||||| |||||||||  ||| ||||||||||||||||    
T  23359436 cttttgccccctcggcagttaattgccgaggaatttgaaatccggctgcagttaact 23359380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 29352256 - 29352304
Alignment:
Q  209 tcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||| |||||||||||||||||||  ||| |||||| ||||||||||||    
T  29352256 tcggcagttaattgtcgaggaatttgaaatccggctccagttaactgcc 29352304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 35493477 - 35493369
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| |||||||||||| ||||  |||||||||| |||||| | ||||||||||||| || ||||||||||||||||| |||||||    
T  35493477 aattgttgttgacacattgcataaggttgagacacacgagtaaaatacgcttttgccccctcggtagttaactgccgaggaattcaaaaaccagctgcag 35493378  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  35493377 ttaactgcc 35493369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 2917617 - 2917728
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||||||  ||||| | |||||| |||||| || |||| |||| |||||||||||     
T  2917617 gaaaattgttgttgacacatttcataaggctgaggcacaaaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattgaaaaaccggcta 2917716  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  2917717 cagttaactgcc 2917728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 45475374 - 45475485
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||| ||| |||||||||||||||| |||| |||| |||||||||||  ||||| | |||||| |||||| || |||| ||||||||||||||||     
T  45475374 gaaaattgatgttgacacatttcataaggctgagacacacaagtaaaatacgattttgccccctcggcagttaactgccgagaaattcaaaaaccggcta 45475473  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  45475474 cagttaactgcc 45475485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 23409640 - 23409529
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| ||||| || ||||||| ||| |||||  |||||||||| | |||| |  ||||| ||||||||| |||||||||||||||| |||||    
T  23409640 gaaaattgttgtggacacgttacataaggctgatgcacactagtaaaatacgcgtttgccctctcggcagttaattgccgaggaattcaaaaactggctg 23409541  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  23409540 cagttaactgcc 23409529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 35490627 - 35490724
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgc 256  Q
    |||||||| ||||||| |||| ||||  ||||||||||| ||||| |||||||   ||||| || ||| |||||||||||||||||||||||||||||    
T  35490627 gacacattgcataaggctgagacacacgagtaaaatacatttttgcctcctcgacggttaactgccgaagaattcaaaaaccggctgcagttaactgc 35490724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 41181369 - 41181482
Alignment:
Q  144 aggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggc 243  Q
    |||| ||||| ||| |||||||| ||||||| |||||||||  ||||||||||  ||||| | |||||| |||||| || |||||||||||| |||||||    
T  41181369 aggagaattgatgttgacacattgcataaggctgaggcacacgagtaaaatacgtttttgccccctcggcagttaactgccgaggaattcaataaccggc 41181468  T
Q  244 tgcagttaactgcc 257  Q
    | || |||||||||    
T  41181469 tacatttaactgcc 41181482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 25184965 - 25184858
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||| ||| |||||||||||||||||  ||||||||||  ||||| | |||| | |||||| ||||||||||||   |||||||||||||    
T  25184965 aattgttgttgacagattgcataaggttgaggcacacgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaatt-tgaaaccggctgcag 25184867  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  25184866 ttaactgcc 25184858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 28342460 - 28342568
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| | || |||||||||||  |||  ||||| | | |||| |||||| |||||| ||||||||||||||||||||     
T  28342460 aattgttgttgacacattgcataaggctaagacacataagtaatttacgtttttgccccttcggcagttaactgtcgaagaattcaaaaaccggctgcaa 28342559  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  28342560 ttaactgcc 28342568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 12905496 - 12905594
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||||||||||||| ||||  |||  |||||||||| ||||| || |||||| |||||| || |||| |||| ||||| ||||||||||||||||||    
T  12905496 gacacatttcataaggctgagaaacaagagtaaaatacgcttttttcccctcggcagttaactgccgagaaattgaaaaatcggctgcagttaactgcc 12905594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 255
Target Start/End: Complemental strand, 82396 - 82292
Alignment:
Q  150 attgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagt 249  Q
    |||||||| |||||||| |||||||||  | ||||  ||||||||||  |||||| |||||||||||||| ||||||| ||||   ||||||||||||||    
T  82396 attgttgttgacacattgcataaggttatgtcacacgagtaaaatacgtttttgtttcctcggtagttaactgtcgagtaatt-tgaaaccggctgcagt 82298  T
Q  250 taactg 255  Q
    ||||||    
T  82297 taactg 82292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 19186683 - 19186791
Alignment:
Q  148 aaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgca 247  Q
    |||||||||| ||||||| |||||||| |||| |||| |||||||||||  ||||  | | |||| ||| || || |||| |||||||||| ||||||||    
T  19186683 aaattgttgttgacacatatcataaggctgagacacacaagtaaaatacgtttttaccccatcggcagtaaactgccgagcaattcaaaaagcggctgca 19186782  T
Q  248 gttaactgc 256  Q
    |||||||||    
T  19186783 gttaactgc 19186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 41500370 - 41500262
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||| ||| ||||||||||||| || ||||  |||  |||||||||| |||||| | |||||| |||||| | || | |||||||||| ||||||||||    
T  41500370 aattgatgttgacacatttcatatggctgagaaacacgagtaaaatacgcttttgccccctcggcagttaactatcaaagaattcaaaatccggctgcag 41500271  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  41500270 ttaactgcc 41500262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 8268887 - 8268780
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgc 246  Q
    ||||||||||| ||||||||| |||||  ||| | |||| ||||||||||  ||||||| |||||| |||||| |||  |||||| |||||| |||||||    
T  8268887 aaaattgttgttgacacattttataagactgacgtacattagtaaaatacgattttgtcccctcggcagttaactgttaaggaatgcaaaaatcggctgc 8268788  T
Q  247 agttaact 254  Q
    | ||||||    
T  8268787 aattaact 8268780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 34921897 - 34921788
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||| | | ||||||||||||||||  |||  |||  ||||||||||  ||||| | || |||||||||| || |||| |||||||||||||||||    
T  34921897 gaaaattgctattgacacatttcataaggcagagaaacacgagtaaaatacgtttttgccccc-cggtagttaactgccgagaaattcaaaaaccggctg 34921799  T
Q  246 cagttaactgc 256  Q
    |||||||||||    
T  34921798 cagttaactgc 34921788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 1096544 - 1096640
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||| ||||||||| ||||||  ||||||||||  ||||| | ||||||  ||||| || |||||||||  ||| |||||||||||||||||||    
T  1096544 cacatttgataaggttgtggcacactagtaaaatacgattttgccccctcggctgttaactgccgaggaatttgaaatccggctgcagttaactgcc 1096640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 16580482 - 16580562
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgagga 229  Q
    ||||||||| |||||||| ||||||| |||| ||||  ||||||||||| ||||| |||||||  ||||||||||| ||||    
T  16580482 aattgttgttgacacattgcataaggctgagacacacgagtaaaatacatttttgcctcctcgacagttaattgtcaagga 16580562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 19187361 - 19187251
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgc 246  Q
    |||||||||||  | |||| |||||||| |||| |||| |||||||||||  ||||| | |||||| |||||| || |||| ||||||||| || | |||    
T  19187361 aaaattgttgttcagacatatcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattcaaaatccagttgc 19187262  T
Q  247 agttaactgcc 257  Q
    ||||| |||||    
T  19187261 agttacctgcc 19187251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 257
Target Start/End: Complemental strand, 45137531 - 45137461
Alignment:
Q  187 agtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||||  ||||| ||||| || ||||||||| ||||||||| ||||  ||||||||||||||||||    
T  45137531 agtaaaatacgattttgcctccttggcagttaattgccgaggaattaaaaattcggctgcagttaactgcc 45137461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 24601636 - 24601681
Alignment:
Q  209 tcggtagttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||    
T  24601636 tcggtagttaactgtcgaggaatttaaaaactggctgcagttaact 24601681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 24612478 - 24612433
Alignment:
Q  209 tcggtagttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||    
T  24612478 tcggtagttaactgtcgaggaatttaaaaactggctgcagttaact 24612433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 2648776 - 2648840
Alignment:
Q  190 aaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    ||||||| |||||| |  ||||| |||||| || | |||||||||||||||||||||||||||||    
T  2648776 aaaatacgcttttgccctctcggcagttaactgccaaggaattcaaaaaccggctgcagttaact 2648840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 24607704 - 24607596
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| ||||||||| | ||||  |||  ||||  | |||| | |||||| || ||| || || |||||||||||||||    
T  24607704 aattgttgttgacacattgcataaggctgaggcacacaggtaatttacgttttttccccctcagcagttaactgccgaagatttaaaaaaccggctgcag 24607605  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  24607604 ttaactgcc 24607596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 36255019 - 36255062
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  36255019 agttaattgccgaggaatttaaaaatcggctgcagttaactgcc 36255062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 41053809 - 41053698
Alignment:
Q  144 aggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggc 243  Q
    |||| ||||| ||| |||||||| ||||||| ||||||||   |||||  |||  ||||| |||||||  |||||| |||| || |||| | ||||||||    
T  41053809 aggagaattgctgttgacacattacataaggctgaggcacgcgagtaatttacgtttttgcctcctcgacagttaactgtccagaaattaagaaaccggc 41053710  T
Q  244 tgcagttaactg 255  Q
    ||||||||||||    
T  41053709 tgcagttaactg 41053698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 3795332 - 3795382
Alignment:
Q  207 cctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||| |||||| ||||||||||||  ||| |||||||||||||||||||    
T  3795332 cctcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgcc 3795382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 24512114 - 24512212
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||||||| || ||||  ||| |||||||||||  ||||  | |||||  |||||| ||| |||||||| ||||||| ||||||||||| ||||    
T  24512114 gacacatttcatatggctgagaaacacaagtaaaatacgtttttaccccctcgacagttaactgttgaggaattaaaaaaccagctgcagttaattgcc 24512212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 41497419 - 41497517
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||||| ||||||| |||||||||  |||||  |||  ||||| | |||||  | |||| || ||| ||||||||||||||||||||||||| ||||    
T  41497419 gacacattgcataaggctgaggcacacgagtaatttacgtttttgccacctcgacacttaactgccgaagaattcaaaaaccggctgcagttaattgcc 41497517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 257
Target Start/End: Complemental strand, 45479935 - 45479822
Alignment:
Q  144 aggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttg-tctcctcggtagttaattgtcgaggaattcaaaaaccgg 242  Q
    |||||||||||||| |||||||||||||||| | ||  |||| ||||||||||  ||||| ||| ||||| |||||| || |||| |||| ||||| ||     
T  45479935 aggaaaattgttgttgacacatttcataaggctcagaaacatgagtaaaatacgattttgctct-ctcggcagttaactgccgagaaattaaaaaatcga 45479837  T
Q  243 ctgcagttaactgcc 257  Q
    ||| |||||| ||||    
T  45479836 ctgtagttaattgcc 45479822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 43950374 - 43950270
Alignment:
Q  152 tgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagtta 251  Q
    |||||| ||||||||| |||||| ||||  |||  ||||||||||| ||||| | |||||| |||||| ||  | ||||||| ||||||| ||||| |||    
T  43950374 tgttgttgacacatttgataaggctgagaaacacgagtaaaatacatttttgccccctcggcagttaactgctgtggaattc-aaaaccgactgcaatta 43950276  T
Q  252 actgcc 257  Q
    ||||||    
T  43950275 actgcc 43950270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 12908505 - 12908457
Alignment:
Q  209 tcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||| |||||| ||||||| ||||||||||  |||||||||||||||||    
T  12908505 tcggcagttaactgtcgagaaattcaaaaattggctgcagttaactgcc 12908457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 41049324 - 41049217
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| ||| ||||||||||||||||| ||||||| || ||||||||||| |||||| |||||||| || |||||||||    
T  41049324 aattgttgttgacacattgcataaggctgatgcacataagtaaaatacgcttttgt-tcttcggtagttaactgtcgaagaattcaataatcggctgcag 41049226  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  41049225 ttaactgcc 41049217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 42681931 - 42682039
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||| | |||| |||| |||||| ||||||||||||||||||| || |||||||||||||||||||||  || ||| |||||||||||| |||||||    
T  42681931 aattgttcttgacatattttataaggctgaggcacataagtaaaatgcatttttgtctcctcggtagttaacggttgagaaattcaaaaaccagctgcag 42682030  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  42682031 ttaactgcc 42682039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 48314611 - 48314715
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||||||||| ||| |||||||||||| ||||| | |||||| |||||| || |||||||||||| ||||||||||||    
T  48314611 aattgttgttgacacattgcataaggttgaggtacacaagtaaaatacatttttg-cccctcggcagttaactgccgaggaattcaataaccggctgcag 48314709  T
Q  249 ttaact 254  Q
    ||||||    
T  48314710 ttaact 48314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 9494945 - 9494834
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||||    | || | |||||| |||||| || ||||||||| ||||||||||||    
T  9494945 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaataggtatatgccccctcggcagttaactgccgaggaattaaaaaaccggctg 9494846  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  9494845 cagttaactgcc 9494834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 46860458 - 46860553
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    |||||||| ||||||| ||||||||| ||||||||||| |||||| | |||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  46860458 gacacattacataaggctgaggcacacaagtaaaatacgcttttgccccctcggcagttaactgtcgaggaattgaaaaaccgactgcagttaact 46860553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 21185556 - 21185664
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||| | |||| ||||||||||||||||  ||||| |||||||| |||||| || ||| |||||||| ||||||||| ||    
T  21185556 aattgttgttgacacattgcataatgatgagacacataagtaaaatacgattttgcctcctcggcagttaactgccgaagaattcaataaccggctgtag 21185655  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  21185656 ttaactgcc 21185664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 37340239 - 37340347
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||| ||| |||||||| ||||||  | |||||||||| ||||||||  ||||||||| |||  |||||| |||||||||||||||||||||| |||||    
T  37340239 aattgatgttgacacattacataagactaaggcacataaataaaatacgtttttgtctcttcgacagttaactgtcgaggaattcaaaaaccggttgcag 37340338  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  37340339 ttaactgcc 37340347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 4952539 - 4952467
Alignment:
Q  41 cctgacccccatgtttgg-ggccagcagctgctttcattggttggaacctcaatcgtgagttcttcgctataa 112  Q
    |||||||||||||||| | |||||||| | ||||| ||||||||||| |||||||||||||||||||||||||    
T  4952539 cctgacccccatgttttgtggccagcaaccgcttttattggttggaatctcaatcgtgagttcttcgctataa 4952467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 28112776 - 28112856
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcga 226  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||| |  ||||| |||||| ||||||    
T  28112776 gaaaattgttgttgacacatttcataaggttgagacacacaagtaaaatacgcttttgccctctcggcagttaactgtcga 28112856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 30355375 - 30355267
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||||||||||||| |  ||||  |||  |||||||||| |||||| | |||||| |||||||||  || ||||||||||| |||||||||    
T  30355375 aattgttgttgacacatttcatatgactgagaaacacgagtaaaatacgcttttgccccctcggcagttaattgctgaagaattcaaaaatcggctgcag 30355276  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  30355275 ttaactgcc 30355267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 36186612 - 36186501
Alignment:
Q  145 ggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggct 244  Q
    ||||||||||||| |||||||| ||||||| || | ||||  |||||||||| |||||| | |||||| |||||| || ||||||||||  ||||||| |    
T  36186612 ggaaaattgttgttgacacattgcataaggctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgaggaattc-gaaaccggtt 36186514  T
Q  245 gcagttaactgcc 257  Q
    |||||||||||||    
T  36186513 gcagttaactgcc 36186501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 36392062 - 36392170
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| | ||||||| |||||||||||  ||||| | |||||  |||||| ||| |||||||||||||| ||| ||| |    
T  36392062 aattgttgttgacacattacataaggcttaggcacacaagtaaaatacgtttttgccccctcgacagttaactgttgaggaattcaaaaatcggttgcgg 36392161  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  36392162 ttaactgcc 36392170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 47060864 - 47060971
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    |||| |||| |||| ||||||||||| ||||||| | |||||||||||  ||||| | |||||| |||||| ||||||||||||| |||| |||||| ||    
T  47060864 aattattgttgacatatttcataaggctgaggcatacaagtaaaatacgtttttgccccctcggcagttaactgtcgaggaattc-aaaatcggctgtag 47060962  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  47060963 ttaactgcc 47060971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 10705182 - 10705293
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||| | |||| ||||||||||| | ||||||| |||||||||||| ||||  | ||| || |||||| || |||| |||| ||||| ||||||    
T  10705182 gaaaattgttattgacatatttcataaggctaaggcacacaagtaaaatacatttttccccccttggcagttaactgccgagaaattaaaaaatcggctg 10705281  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  10705282 cagttaactgcc 10705293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 46863480 - 46863373
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||| |||| ||||||| |||| |||| |||||||||||  ||||| | | |||| |||||| || |||| |||| |||||||||||||||    
T  46863480 aattgttgttgacgcattgcataaggctgagacacacaagtaaaatacgtttttgccccatcggcagttaactgccgagaaattgaaaaaccggctgcag 46863381  T
Q  249 ttaactgc 256  Q
    ||||||||    
T  46863380 ttaactgc 46863373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 27453730 - 27453622
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    |||||||||  |||||||| |||||| | ||  |||||||||||||||   |||| | |||||| |||||| || ||||||||| |||| ||||||||||    
T  27453730 aattgttgttcacacatttgataaggcttagaaacataagtaaaatacgactttgccccctcggcagttaactgccgaggaattaaaaatccggctgcag 27453631  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  27453630 ttaactgcc 27453622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 10225983 - 10225890
Alignment:
Q  146 gaaaattgttgtcgacacattt-cataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaa 238  Q
    |||||||||||| ||||||||| ||||||| ||| ||||||||||||||||   ||||| |||||||  |||||| |||||| |||| ||||||    
T  10225983 gaaaattgttgttgacacattttcataaggctgaagcacataagtaaaatatgtttttgcctcctcgacagttaactgtcgatgaatgcaaaaa 10225890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 21188471 - 21188428
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  21188471 agttaactgccgaggaattcaaaaaccggctgcagttaactgcc 21188428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 39460490 - 39460597
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    |||||||||  | |||||| |||||||||||  |||  ||||||||||  |||| ||  ||||| |||| |||| ||||||||| |||| ||||||||||    
T  39460490 aattgttgtttatacatttgataaggttgagaaacacgagtaaaatacgattttatcctctcggcagttgattgccgaggaattaaaaatccggctgcag 39460589  T
Q  249 ttaactgc 256  Q
    ||||||||    
T  39460590 ttaactgc 39460597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 40166837 - 40166788
Alignment:
Q  208 ctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||| |||||| |||||||||||||| |||||| |||||||||||||||    
T  40166837 ctcggcagttaactgtcgaggaattcagaaaccgactgcagttaactgcc 40166788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 28980309 - 28980201
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| |||| ||||  ||||||||||  ||||| | |||| | |||||  || ||| |||||||| | |||| |||||    
T  28980309 aattgttgttgacacattgcataaggctgagacacacgagtaaaatacgtttttgccccctcagcagttagctgccgaagaattcaatatccggatgcag 28980210  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  28980209 ttaactgcc 28980201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 40142732 - 40142692
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  40142732 agttaattgtcgaggaattcataaaccggttgcagttaact 40142692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 41623951 - 41623904
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatac 196  Q
    ||||| ||| |||||||| ||||||||||||||||| |||||||||||    
T  41623951 aattgctgttgacacattacataaggttgaggcacacaagtaaaatac 41623904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 11100586 - 11100536
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatac 196  Q
    |||||||||||| ||||||||| ||||||| |||||||| | |||||||||    
T  11100586 gaaaattgttgttgacacattttataaggtcgaggcacacatgtaaaatac 11100536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 34622436 - 34622542
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| ||||||||| ||||||  |||  ||||| | ||| |  |||||| ||  |||||||| | |||||| ||||||    
T  34622436 aattgttgttgacacattgcataaggctgaggcacacaagtaatttacgtttttgcccccttgacagttaactgcagaggaattaagaaaccgactgcag 34622535  T
Q  249 ttaactg 255  Q
    |||||||    
T  34622536 ttaactg 34622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 34623522 - 34623408
Alignment:
Q  143 gaggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccgg 242  Q
    ||||| ||||| ||| |||| ||| |||||||||||| ||||  |||||  |||  ||||| ||| |||| |||||| || ||||||||| | | | |||    
T  34623522 gaggagaattgctgttgacatattgcataaggttgagacacacgagtaatttacgtttttgcctcatcggcagttaactgccgaggaattaagagatcgg 34623423  T
Q  243 ctgcagttaactgcc 257  Q
    |||||||||||||||    
T  34623422 ctgcagttaactgcc 34623408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 45361644 - 45361694
Alignment:
Q  207 cctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||| |||||| || ||||||||| |||| |||||||||||||||||||    
T  45361644 cctcggcagttaactgacgaggaattaaaaatccggctgcagttaactgcc 45361694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 29593452 - 29593356
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||| ||||||||| | ||||  ||||||||||| ||||  | |||||  |||||| || |||||||||  ||  |||||||||||||||||||    
T  29593452 cacatttgataaggttgtgccacactagtaaaatacaattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagttaactgcc 29593356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 36395081 - 36395037
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaa 193  Q
    ||||||||| || | ||| ||||||||||||||||||||||||||    
T  36395081 aattgttgttgagaaattgcataaggttgaggcacataagtaaaa 36395037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 18438571 - 18438679
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| ||| ||||| ||||||||||| |||||| | | |||| |||||| ||| ||||||||||| ||||||||||||    
T  18438571 aattgttgttgacacattgcataaggctgatgcacacaagtaaaatacgcttttgccccttcggcagttaactgttgaggaattcaataaccggctgcag 18438670  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  18438671 ttaactgcc 18438679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 257
Target Start/End: Original strand, 7168022 - 7168133
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||||||  ||||| | |||||   ||||  || ||| ||||||||||||||||||    
T  7168022 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccctcgactgttagctgccgaagaattcaaaaaccggctg 7168121  T
Q  246 cagttaactgcc 257  Q
    ||||||||||||    
T  7168122 cagttaactgcc 7168133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 41855306 - 41855413
Alignment:
Q  150 attgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagt 249  Q
    |||||||| ||||||||||||| || ||||  |||| ||||||||||  ||||| |||||||| |||||| |||||| ||||||||||| ||||||||||    
T  41855306 attgttgttgacacatttcatatggctgagaaacatgagtaaaatacgtttttgcctcctcggcagttaactgtcgaagaattcaaaaatcggctgcagt 41855405  T
Q  250 taactgcc 257  Q
    ||||||||    
T  41855406 taactgcc 41855413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 38871741 - 38871844
Alignment:
Q  154 ttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaac 253  Q
    |||| ||||||||||||||| |||||||||| |||||||||||  |||||  || | |||||||||||||||||||||||| ||| ||  ||||||||||    
T  38871741 ttgttgacacatttcataagattgaggcacacaagtaaaatacgtttttgcttcattggtagttaattgtcgaggaattcataaatcgattgcagttaac 38871840  T
Q  254 tgcc 257  Q
    ||||    
T  38871841 tgcc 38871844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 38873066 - 38872958
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    |||||||| ||||||||| ||||||| ||| ||||| |||||||| | | ||||||| |||||  |||||| |  ||||||||| |||||||||||||||    
T  38873066 aattgttgacgacacattgcataaggctgatgcacacaagtaaaaaatatttttgtcccctcgtcagttaactaccgaggaatttaaaaaccggctgcag 38872967  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  38872966 ttaactgcc 38872958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 41858257 - 41858149
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||||||||||||| || ||||  |||  ||||||||||  ||||| | |||||| |||||| || ||| |||||||||||||||||||||    
T  41858257 aattgttgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactggcgaagaattcaaaaaccggctgcag 41858158  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  41858157 ttaactgcc 41858149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 18441577 - 18441469
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||||||||||| |||| |||| |||||||||||  ||||| | |||||| |||||| || |||| ||||||| |||||  || ||    
T  18441577 aattgttgttgacacatttcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattcaataaccgattgtag 18441478  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  18441477 ttaactgcc 18441469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 34823152 - 34823049
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| ||||||||  |||||||||||||||| | |||| ||||  |||||||  ||||| |||||| |||||||||||| ||||  |||||||||    
T  34823152 aattgttgttgacacattgtataaggttgaggcacacacgtaatatacgtttttgtcctctcggcagttaactgtcgaggaattaaaaatacggctgcag 34823053  T
Q  249 ttaa 252  Q
    ||||    
T  34823052 ttaa 34823049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 3395821 - 3395937
Alignment:
Q  141 ttgaggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaacc 240  Q
    |||| |||||||| | | |||||||||||||||||||||||||| ||||||||||   ||||| | |||| | |||||| || ||||||||| |||||      
T  3395821 ttgatgaaaattgctcttgacacatttcataaggttgaggcacacaagtaaaatatgtttttgccccctcagcagttaactgccgaggaatttaaaaatt 3395920  T
Q  241 ggctgcagttaactgcc 257  Q
    |  ||||||||||||||    
T  3395921 gattgcagttaactgcc 3395937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 4866369 - 4866476
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctg 245  Q
    ||||||||||||  |||||| |||||||| |||| ||||  ||||||||||    ||||| |||||| |||||| |||| || |||||||||||||||||    
T  4866369 gaaaattgttgttcacacatatcataaggctgagacacacgagtaaaatacgaaattgtc-cctcggcagttaactgtcaagaaattcaaaaaccggctg 4866467  T
Q  246 cagttaact 254  Q
    |||||||||    
T  4866468 cagttaact 4866476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 28168723 - 28168630
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    |||||||||||||||| |||||||||  |||||||||   ||||| |||||||| |||||| |||||| |||| |||||| | |||||||||||||    
T  28168723 gacacatttcataaggatgaggcaca--agtaaaatatgtttttgcctcctcggcagttaactgtcgaagaatgcaaaaatcagctgcagttaact 28168630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 257
Target Start/End: Original strand, 42602395 - 42602505
Alignment:
Q  147 aaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgc 246  Q
    |||| |||||| ||||| ||||||| || ||||  |||  ||||||||||| ||||||    |||| |||||| || ||| ||||||||||||||| |||    
T  42602395 aaaaatgttgttgacacgtttcatatggctgagaaacacgagtaaaatacatttttgttctatcggcagttaactgccgaagaattcaaaaaccggatgc 42602494  T
Q  247 agttaactgcc 257  Q
    |||||||||||    
T  42602495 agttaactgcc 42602505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 42605312 - 42605262
Alignment:
Q  207 cctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||| |||||| |||||| ||||||||||| ||||||||||||||||||    
T  42605312 cctcggcagttaactgtcgaagaattcaaaaatcggctgcagttaactgcc 42605262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 21835250 - 21835210
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  21835250 agttaaatgtcgaggaattcataaaccggctgcagttaact 21835210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 35389445 - 35389553
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||||||| |||||||| ||||||| |||| || |  |||||  |||  ||||| ||| |||  |||||| || |||| |||||||||||| |||||||    
T  35389445 aattgttgttgacacattgcataaggctgagacatacgagtaatttacgtttttgcctcttcgacagttaactgccgagaaattcaaaaaccagctgcag 35389544  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  35389545 ttaactgcc 35389553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 45454355 - 45454451
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||| |||||  || ||||||  ||||||||||  ||||| |||||||| |||||| || |||||||||  ||| |||| ||||||||||||||    
T  45454355 cacatttgataagactgtggcacactagtaaaatacgattttgcctcctcggcagttaactgccgaggaatttgaaatccggatgcagttaactgcc 45454451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 28646318 - 28646275
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  28646318 agttaattgccgaggaatttaaaaatcggctgcagttaactgcc 28646275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 28650902 - 28650859
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  28650902 agttaattgccgaggaatttaaaaatcggctgcagttaactgcc 28650859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 18205789 - 18205831
Alignment:
Q  215 gttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||| || ||| ||||||||||||||||||||||||||||||    
T  18205789 gttaactgccgaagaattcaaaaaccggctgcagttaactgcc 18205831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 44052350 - 44052260
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagtta 251  Q
    |||||| |||||||||| ||||||  ||||||  ||  ||||| | |||||||||||||||| |||||||||   || |||||||||||||    
T  44052350 cacattacataaggttgtggcacacgagtaaatgacgtttttgccccctcggtagttaattgccgaggaatttgcaatccggctgcagtta 44052260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 1116269 - 1116216
Alignment:
Q  204 tctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||| |||| |||||| ||||||||||||  ||| |||||||||||||||||||    
T  1116269 tctcatcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgcc 1116216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 43188022 - 43188119
Alignment:
Q  161 cacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggct-gcagttaactgcc 257  Q
    ||||||| |||||| ||||  |||  ||||||||||  ||||| | |||||  ||||||||||||||||||| |||| |||||| | |||||||||||    
T  43188022 cacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcgacagttaattgtcgaggaattaaaaatccggctggtagttaactgcc 43188119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 21406269 - 21406309
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    |||||| || ||||||||||| |||||||||||||||||||    
T  21406269 agttaactgccgaggaattcataaaccggctgcagttaact 21406309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 21800761 - 21800801
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    |||||| || ||||||||||| |||||||||||||||||||    
T  21800761 agttaactgccgaggaattcataaaccggctgcagttaact 21800801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 35962276 - 35962352
Alignment:
Q  181 cacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||| ||||||||||  ||||| |  ||||| |||||| ||||||||||||  ||| |||||| ||||||||||||    
T  35962276 cacattagtaaaatacgattttgccctctcggcagttaactgtcgaggaatttgaaatccggctacagttaactgcc 35962352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 35966870 - 35966782
Alignment:
Q  164 atttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaa 252  Q
    |||| ||||||||| | ||||  ||||||||||| ||||| | |||||| |||||| || |||||||||  ||| ||| ||||||||||    
T  35966870 atttgataaggttgtgtcacactagtaaaatacaattttgccccctcggcagttaactgccgaggaatttgaaatccgactgcagttaa 35966782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 39751011 - 39751118
Alignment:
Q  149 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcag 248  Q
    ||||| ||| |||||||| ||||| |||||||||||  ||||||||||  ||||| | ||| || | |||| || ||| |||||   |||||||||||||    
T  39751011 aattgctgttgacacattgcataatgttgaggcacacgagtaaaatacgtttttgcccccttggcaattaactgccgatgaatt-tgaaaccggctgcag 39751109  T
Q  249 ttaactgcc 257  Q
    |||||||||    
T  39751110 ttaactgcc 39751118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 11853 - 11739
Alignment:
Q  142 tgaggaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccg 241  Q
    |||||||||||| ||| ||||||||| ||||| |||||  ||| |||||||||||||||||| | | |||| |||||| ||  || ||||||||||||||    
T  11853 tgaggaaaattgctgttgacacattttataagattgagatacacaagtaaaatacacttttgccccttcggcagttaactgctgaagaattcaaaaaccg 11754  T
Q  242 gctgcagttaactgc 256  Q
    |||||||||||||||    
T  11753 gctgcagttaactgc 11739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 3843 - 3930
Alignment:
Q  169 ataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||||||||||||| ||||||||||   ||||||| |||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  3843 ataaggttgaggcacacaagtaaaatatt-ttttgtcccctcggcagttaactgtcgaggaattcaaaaatcggctgcagttaactgcc 3930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 7430 - 7332
Alignment:
Q  159 gacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||| |||||||||||||||||||||| |||||||||   ||||| ||||| |  |||||||||  ||||||||||||||||||||||| | |||||||    
T  7430 gacaaatttcataaggttgaggcacatgagtaaaatatgtttttgcctccttgacagttaattgctgaggaattcaaaaaccggctgcaatcaactgcc 7332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 15705 - 15748
Alignment:
Q  214 agttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  15705 agttaactgtcgaggaattcaaaaaccggttgcagttaactgcc 15748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 27377 - 27427
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatac 196  Q
    |||||||||||| |||||||||||||| ||| ||||||| |||||||||||    
T  27377 gaaaattgttgttgacacatttcataaagttaaggcacacaagtaaaatac 27427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 257
Target Start/End: Original strand, 232523 - 232593
Alignment:
Q  187 agtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||||  |||| || |||||| |||||| |||||||||||| |||| ||| |||||||||||||||    
T  232523 agtaaaatacgattttatcccctcggcagttaactgtcgaggaattaaaaatccgactgcagttaactgcc 232593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 15976 - 15920
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacactttt 202  Q
    |||||||||||| |||||||||||| ||| ||||||| | |||||||||||| ||||    
T  15976 gaaaattgttgttgacacatttcattaggctgaggcatacaagtaaaatacaatttt 15920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 16346 - 16439
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaacc 240  Q
    ||||||| |||| |||||||||||||||  ||||||||| | | ||||||   ||||| | ||||||||||||| ||||||| |||| |||||||    
T  16346 gaaaattattgttgacacatttcataagactgaggcacacatg-aaaatatgtttttgccccctcggtagttaactgtcgagaaattgaaaaacc 16439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 934 - 885
Alignment:
Q  146 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaata 195  Q
    |||||||| ||| |||| ||||||||||| ||||||||| ||||||||||    
T  934 gaaaattgctgttgacatatttcataaggctgaggcacacaagtaaaata 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 17467 - 17379
Alignment:
Q  169 ataaggttgaggcacataagtaaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaactgcc 257  Q
    ||||||||| | ||||  ||||||||||  ||||  | |||||| |||||| || |||||||||  ||| |||||||||||||||||||    
T  17467 ataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgcc 17379  T

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Target: scaffold0169 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 1718 - 1686
Alignment:
Q  224 cgaggaattcaaaaaccggctgcagttaactgc 256  Q
    |||||||||||||||||| ||||||||||||||    
T  1718 cgaggaattcaaaaaccgactgcagttaactgc 1686  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 23322 - 23258
Alignment:
Q  190 aaaatacacttttgtctcctcggtagttaattgtcgaggaattcaaaaaccggctgcagttaact 254  Q
    |||||||  ||||||| | ||| || |||| |||||||||||| ||||| |||||||||||||||    
T  23322 aaaatacgattttgtcccatcgatatttaactgtcgaggaatttaaaaatcggctgcagttaact 23258  T

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