View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21612_low_43 (Length: 214)

Name: NF21612_low_43
Description: NF21612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21612_low_43
NF21612_low_43
[»] chr2 (54 HSPs)
chr2 (4-211)||(44089486-44089691)
chr2 (8-93)||(27328312-27328396)
chr2 (1-90)||(11093524-11093613)
chr2 (1-73)||(1961366-1961438)
chr2 (90-159)||(27328819-27328888)
chr2 (1-90)||(38465783-38465872)
chr2 (6-90)||(32308321-32308405)
chr2 (1-84)||(7079370-7079453)
chr2 (1-92)||(15119769-15119860)
chr2 (5-55)||(3197987-3198037)
chr2 (1-90)||(27331816-27331905)
chr2 (14-79)||(45472415-45472480)
chr2 (15-91)||(15859544-15859620)
chr2 (1-73)||(31024182-31024254)
chr2 (1-73)||(32630463-32630535)
chr2 (17-92)||(21183400-21183475)
chr2 (1-92)||(31102006-31102097)
chr2 (5-79)||(10996251-10996325)
chr2 (1-55)||(13295442-13295496)
chr2 (1-87)||(37195109-37195195)
chr2 (5-90)||(10602355-10602440)
chr2 (1-54)||(41805304-41805357)
chr2 (5-62)||(44868534-44868591)
chr2 (10-90)||(13333441-13333521)
chr2 (13-89)||(15900288-15900364)
chr2 (15-95)||(15916722-15916802)
chr2 (10-90)||(25270850-25270930)
chr2 (1-97)||(26003422-26003518)
chr2 (15-55)||(37182887-37182927)
chr2 (17-77)||(38181767-38181827)
chr2 (10-90)||(41056882-41056962)
chr2 (10-70)||(43426642-43426702)
chr2 (5-52)||(4637068-4637115)
chr2 (10-93)||(5574176-5574259)
chr2 (5-52)||(10041603-10041650)
chr2 (1-52)||(17844008-17844059)
chr2 (6-73)||(32800718-32800785)
chr2 (7-77)||(32630413-32630483)
chr2 (15-77)||(45473084-45473146)
chr2 (5-62)||(2544412-2544469)
chr2 (5-54)||(11153235-11153284)
chr2 (1-62)||(19951502-19951563)
chr2 (4-45)||(25312501-25312542)
chr2 (10-71)||(26003501-26003562)
chr2 (1-62)||(29765721-29765782)
chr2 (5-62)||(38465850-38465907)
chr2 (1-90)||(41805331-41805420)
chr2 (5-89)||(1961304-1961388)
chr2 (10-90)||(3098120-3098200)
chr2 (8-52)||(14952797-14952841)
chr2 (5-89)||(15119838-15119922)
chr2 (17-89)||(23378015-23378087)
chr2 (15-79)||(38618400-38618464)
chr2 (14-70)||(41824330-41824386)
[»] chr8 (42 HSPs)
chr8 (4-89)||(13964414-13964499)
chr8 (35-160)||(44098915-44099041)
chr8 (85-161)||(571475-571551)
chr8 (1-90)||(7484674-7484763)
chr8 (15-84)||(41753758-41753827)
chr8 (17-89)||(10934676-10934748)
chr8 (5-91)||(11295657-11295743)
chr8 (10-75)||(39099611-39099676)
chr8 (1-89)||(5888331-5888419)
chr8 (6-78)||(9015878-9015950)
chr8 (7-90)||(4613623-4613705)
chr8 (5-52)||(43295949-43295996)
chr8 (5-82)||(3225781-3225859)
chr8 (7-85)||(17871762-17871840)
chr8 (1-83)||(18603515-18603597)
chr8 (5-87)||(24471181-24471263)
chr8 (5-55)||(43295917-43295967)
chr8 (4-89)||(2296469-2296554)
chr8 (1-78)||(3225837-3225914)
chr8 (5-62)||(6189695-6189752)
chr8 (22-79)||(27502906-27502963)
chr8 (7-84)||(45045440-45045517)
chr8 (5-89)||(13080084-13080167)
chr8 (7-62)||(21435691-21435746)
chr8 (5-52)||(28882696-28882743)
chr8 (7-77)||(13080151-13080221)
chr8 (14-52)||(17800698-17800736)
chr8 (19-77)||(17986201-17986259)
chr8 (14-52)||(24418913-24418951)
chr8 (5-91)||(26998730-26998816)
chr8 (10-92)||(40098826-40098908)
chr8 (1-82)||(6614687-6614768)
chr8 (5-90)||(13496496-13496581)
chr8 (11-55)||(5040097-5040141)
chr8 (5-73)||(7258646-7258714)
chr8 (12-52)||(8739666-8739706)
chr8 (5-45)||(19293055-19293095)
chr8 (5-89)||(24017713-24017797)
chr8 (1-73)||(24017775-24017847)
chr8 (1-77)||(24287842-24287918)
chr8 (1-53)||(33070196-33070248)
chr8 (10-62)||(36309924-36309976)
[»] chr1 (60 HSPs)
chr1 (1-89)||(3549836-3549924)
chr1 (1-73)||(34953907-34953979)
chr1 (1-77)||(33765844-33765920)
chr1 (5-73)||(41007738-41007806)
chr1 (1-93)||(48083495-48083587)
chr1 (9-78)||(14967290-14967359)
chr1 (13-90)||(18551330-18551407)
chr1 (1-86)||(50550176-50550261)
chr1 (7-79)||(11324496-11324568)
chr1 (7-79)||(11482517-11482589)
chr1 (15-62)||(35544555-35544602)
chr1 (15-89)||(14967220-14967294)
chr1 (38-92)||(18604476-18604530)
chr1 (5-55)||(29070678-29070728)
chr1 (5-87)||(34953957-34954039)
chr1 (15-77)||(37589668-37589730)
chr1 (5-79)||(50308689-50308763)
chr1 (14-79)||(10256786-10256851)
chr1 (40-89)||(10831074-10831123)
chr1 (5-54)||(26674247-26674296)
chr1 (35-80)||(40610965-40611010)
chr1 (5-62)||(41007699-41007756)
chr1 (1-73)||(25547528-25547600)
chr1 (1-85)||(39940544-39940627)
chr1 (15-62)||(14885341-14885388)
chr1 (15-62)||(14885499-14885546)
chr1 (15-62)||(20621252-20621299)
chr1 (16-79)||(27544007-27544069)
chr1 (4-95)||(43317997-43318088)
chr1 (5-92)||(45115231-45115318)
chr1 (19-90)||(46412763-46412834)
chr1 (14-73)||(47446701-47446760)
chr1 (8-79)||(50550124-50550195)
chr1 (1-79)||(1597246-1597324)
chr1 (18-92)||(6156626-6156700)
chr1 (20-90)||(19175664-19175734)
chr1 (10-52)||(19771177-19771219)
chr1 (15-73)||(24981912-24981970)
chr1 (14-52)||(42660425-42660463)
chr1 (14-52)||(52112908-52112946)
chr1 (17-62)||(5431413-5431458)
chr1 (7-52)||(8984220-8984265)
chr1 (7-52)||(15351778-15351823)
chr1 (7-52)||(24807923-24807968)
chr1 (48-93)||(27068771-27068816)
chr1 (11-52)||(38824358-38824399)
chr1 (10-91)||(48022588-48022669)
chr1 (1-77)||(1597196-1597272)
chr1 (5-73)||(3549790-3549858)
chr1 (23-83)||(6079142-6079202)
chr1 (1-53)||(14891795-14891847)
chr1 (17-53)||(15351746-15351782)
chr1 (16-92)||(19175580-19175656)
chr1 (13-77)||(29043461-29043525)
chr1 (5-45)||(29070656-29070696)
chr1 (5-45)||(31909788-31909828)
chr1 (22-90)||(33400619-33400687)
chr1 (10-90)||(33604057-33604137)
chr1 (1-77)||(42761460-42761536)
chr1 (10-90)||(46906927-46907007)
[»] chr5 (54 HSPs)
chr5 (15-92)||(13710361-13710438)
chr5 (10-89)||(15712187-15712266)
chr5 (20-92)||(13356213-13356285)
chr5 (6-90)||(31785937-31786021)
chr5 (1-84)||(3100405-3100488)
chr5 (7-86)||(13391529-13391608)
chr5 (10-52)||(39785127-39785169)
chr5 (5-62)||(11795758-11795815)
chr5 (1-74)||(41005678-41005751)
chr5 (1-77)||(11795793-11795869)
chr5 (10-90)||(17625706-17625786)
chr5 (1-93)||(33075122-33075214)
chr5 (5-73)||(36897753-36897821)
chr5 (17-79)||(33867998-33868060)
chr5 (18-68)||(36138374-36138424)
chr5 (10-91)||(3851356-3851437)
chr5 (5-82)||(17967317-17967394)
chr5 (5-89)||(71254-71338)
chr5 (14-78)||(1098634-1098698)
chr5 (7-79)||(3100468-3100540)
chr5 (15-91)||(10437708-10437784)
chr5 (8-52)||(10495243-10495287)
chr5 (10-98)||(23914827-23914915)
chr5 (5-45)||(24089081-24089121)
chr5 (1-77)||(30371340-30371416)
chr5 (1-52)||(884935-884986)
chr5 (5-52)||(6279471-6279518)
chr5 (15-62)||(18652836-18652883)
chr5 (1-90)||(71316-71407)
chr5 (15-77)||(7505167-7505229)
chr5 (1-90)||(14772542-14772629)
chr5 (7-53)||(17967378-17967424)
chr5 (5-54)||(5984044-5984093)
chr5 (7-52)||(11773488-11773533)
chr5 (11-52)||(12922439-12922480)
chr5 (10-55)||(14274163-14274208)
chr5 (7-52)||(25408606-25408651)
chr5 (20-77)||(25941667-25941724)
chr5 (11-52)||(30489163-30489204)
chr5 (7-52)||(30780133-30780178)
chr5 (5-45)||(1023711-1023751)
chr5 (15-55)||(1100086-1100126)
chr5 (7-43)||(2673888-2673924)
chr5 (11-63)||(4739623-4739675)
chr5 (5-85)||(7313830-7313909)
chr5 (5-45)||(15965995-15966035)
chr5 (1-77)||(18254696-18254772)
chr5 (1-45)||(18942043-18942087)
chr5 (1-53)||(22650887-22650939)
chr5 (15-71)||(28518793-28518849)
chr5 (7-47)||(31911335-31911375)
chr5 (14-90)||(40100081-40100157)
chr5 (5-45)||(40355190-40355230)
chr5 (9-45)||(42247591-42247627)
[»] chr3 (53 HSPs)
chr3 (12-77)||(29241548-29241613)
chr3 (1-85)||(37897739-37897823)
chr3 (15-79)||(40639866-40639930)
chr3 (1-89)||(52215937-52216025)
chr3 (15-89)||(30519669-30519743)
chr3 (16-86)||(40639781-40639851)
chr3 (1-90)||(10872666-10872755)
chr3 (16-77)||(35511843-35511904)
chr3 (1-73)||(12744958-12745030)
chr3 (1-73)||(54595801-54595873)
chr3 (5-92)||(331859-331946)
chr3 (4-58)||(1086535-1086589)
chr3 (15-93)||(41253922-41254000)
chr3 (23-89)||(41254010-41254076)
chr3 (1-54)||(19810947-19811000)
chr3 (16-93)||(22496942-22497019)
chr3 (1-90)||(41743647-41743736)
chr3 (15-92)||(45736679-45736756)
chr3 (21-89)||(8256901-8256969)
chr3 (5-89)||(37897677-37897761)
chr3 (1-73)||(42681191-42681263)
chr3 (15-90)||(12047239-12047314)
chr3 (1-91)||(12109890-12109981)
chr3 (15-62)||(20625261-20625308)
chr3 (5-52)||(22528913-22528960)
chr3 (22-77)||(24596898-24596953)
chr3 (5-52)||(27102168-27102215)
chr3 (1-52)||(27707235-27707286)
chr3 (14-81)||(39836935-39837002)
chr3 (15-62)||(52866439-52866486)
chr3 (14-52)||(2128431-2128469)
chr3 (36-90)||(4821473-4821527)
chr3 (7-53)||(4980336-4980382)
chr3 (10-92)||(10872738-10872820)
chr3 (5-55)||(12744930-12744980)
chr3 (5-55)||(18409249-18409299)
chr3 (5-75)||(21970510-21970579)
chr3 (5-75)||(21992946-21993015)
chr3 (1-75)||(22152724-22152797)
chr3 (12-62)||(26367543-26367593)
chr3 (15-89)||(27224575-27224649)
chr3 (12-73)||(24075513-24075574)
chr3 (5-54)||(26121569-26121618)
chr3 (1-54)||(26121596-26121649)
chr3 (1-54)||(26244437-26244490)
chr3 (1-62)||(37807532-37807593)
chr3 (19-52)||(50603557-50603590)
chr3 (1-89)||(3648756-3648844)
chr3 (14-62)||(8150002-8150050)
chr3 (17-73)||(24075458-24075514)
chr3 (25-85)||(34327589-34327649)
chr3 (13-45)||(39009874-39009906)
chr3 (4-52)||(39289593-39289641)
[»] chr7 (52 HSPs)
chr7 (5-89)||(12274804-12274888)
chr7 (17-91)||(25245216-25245290)
chr7 (1-89)||(10095714-10095802)
chr7 (12-79)||(18819999-18820066)
chr7 (17-94)||(2943202-2943279)
chr7 (5-73)||(21586875-21586943)
chr7 (7-62)||(43813188-43813243)
chr7 (4-90)||(6455609-6455695)
chr7 (15-92)||(6803444-6803521)
chr7 (5-90)||(7295117-7295202)
chr7 (9-90)||(12274874-12274955)
chr7 (4-73)||(24934562-24934631)
chr7 (5-53)||(7104744-7104792)
chr7 (25-73)||(24280902-24280950)
chr7 (5-52)||(5977892-5977939)
chr7 (18-89)||(7104644-7104715)
chr7 (7-62)||(14995887-14995942)
chr7 (5-92)||(31319577-31319664)
chr7 (14-77)||(38940227-38940290)
chr7 (5-52)||(39970218-39970265)
chr7 (7-89)||(23797411-23797493)
chr7 (5-55)||(26385654-26385704)
chr7 (5-75)||(28752088-28752158)
chr7 (1-71)||(30138801-30138871)
chr7 (5-71)||(30138849-30138915)
chr7 (15-73)||(31115680-31115738)
chr7 (24-90)||(43103066-43103132)
chr7 (12-93)||(47535038-47535120)
chr7 (12-45)||(3106014-3106047)
chr7 (4-93)||(4406070-4406159)
chr7 (5-90)||(6455543-6455628)
chr7 (7-52)||(10595554-10595599)
chr7 (7-52)||(27242477-27242522)
chr7 (29-74)||(28229103-28229148)
chr7 (14-79)||(30457800-30457865)
chr7 (1-54)||(37101725-37101778)
chr7 (11-52)||(46578297-46578338)
chr7 (1-73)||(785609-785681)
chr7 (15-63)||(3882882-3882930)
chr7 (15-55)||(5691547-5691587)
chr7 (5-73)||(8169158-8169225)
chr7 (5-45)||(19197772-19197812)
chr7 (25-73)||(23818435-23818483)
chr7 (5-89)||(24934612-24934696)
chr7 (5-45)||(27163204-27163244)
chr7 (10-86)||(29498781-29498857)
chr7 (12-56)||(32549849-32549893)
chr7 (5-53)||(32549882-32549930)
chr7 (5-45)||(37066221-37066261)
chr7 (5-73)||(38940281-38940348)
chr7 (5-45)||(39970196-39970236)
chr7 (8-52)||(40211184-40211228)
[»] chr6 (30 HSPs)
chr6 (4-62)||(34170100-34170158)
chr6 (21-78)||(29419864-29419921)
chr6 (1-77)||(15517147-15517223)
chr6 (14-90)||(15718463-15718539)
chr6 (4-90)||(10258364-10258450)
chr6 (7-89)||(32254884-32254966)
chr6 (1-73)||(34379792-34379864)
chr6 (5-92)||(6033027-6033114)
chr6 (5-90)||(26527184-26527269)
chr6 (1-89)||(7158251-7158339)
chr6 (14-90)||(8449568-8449644)
chr6 (14-90)||(8458372-8458448)
chr6 (1-73)||(12104756-12104828)
chr6 (5-73)||(16120976-16121044)
chr6 (1-89)||(28555004-28555092)
chr6 (7-46)||(14173453-14173492)
chr6 (7-46)||(14177989-14178028)
chr6 (7-89)||(6032961-6033043)
chr6 (5-55)||(11637199-11637249)
chr6 (15-93)||(18886299-18886377)
chr6 (15-73)||(26527261-26527319)
chr6 (1-62)||(3199740-3199801)
chr6 (1-62)||(20704045-20704106)
chr6 (22-79)||(29072146-29072203)
chr6 (22-79)||(29104719-29104776)
chr6 (1-90)||(31996556-31996645)
chr6 (5-89)||(15517086-15517169)
chr6 (10-62)||(17773523-17773575)
chr6 (22-62)||(29072090-29072130)
chr6 (22-62)||(29104663-29104703)
[»] chr4 (61 HSPs)
chr4 (5-79)||(48806261-48806335)
chr4 (5-90)||(4406235-4406320)
chr4 (24-90)||(16578589-16578655)
chr4 (19-93)||(19934713-19934787)
chr4 (1-91)||(24798184-24798274)
chr4 (23-89)||(53176303-53176369)
chr4 (1-82)||(32599537-32599618)
chr4 (16-93)||(54164804-54164881)
chr4 (1-81)||(22493633-22493713)
chr4 (7-82)||(2401042-2401117)
chr4 (16-91)||(19934631-19934706)
chr4 (1-52)||(24275274-24275325)
chr4 (15-90)||(39533827-39533902)
chr4 (5-52)||(42013178-42013225)
chr4 (15-89)||(12912604-12912678)
chr4 (16-90)||(29006907-29006981)
chr4 (5-90)||(33036925-33037010)
chr4 (1-54)||(36072627-36072680)
chr4 (5-90)||(38382037-38382122)
chr4 (15-79)||(2582813-2582877)
chr4 (5-77)||(4406302-4406374)
chr4 (5-77)||(4484081-4484153)
chr4 (35-79)||(8311328-8311372)
chr4 (1-73)||(16170967-16171039)
chr4 (8-52)||(25700521-25700565)
chr4 (1-73)||(39235148-39235220)
chr4 (5-93)||(47308105-47308193)
chr4 (5-45)||(51126144-51126184)
chr4 (1-73)||(52914055-52914127)
chr4 (1-73)||(55936044-55936116)
chr4 (10-89)||(27537051-27537130)
chr4 (5-52)||(33118230-33118277)
chr4 (9-52)||(38949747-38949790)
chr4 (19-90)||(54164888-54164959)
chr4 (7-89)||(4370395-4370477)
chr4 (15-73)||(6975004-6975062)
chr4 (10-52)||(20542869-20542911)
chr4 (15-89)||(25022513-25022587)
chr4 (14-52)||(37255714-37255752)
chr4 (5-75)||(40051053-40051123)
chr4 (15-73)||(40952359-40952417)
chr4 (1-79)||(46803465-46803543)
chr4 (15-73)||(47181570-47181628)
chr4 (1-46)||(10308297-10308342)
chr4 (16-73)||(16667135-16667192)
chr4 (18-87)||(20215564-20215633)
chr4 (9-62)||(21586983-21587036)
chr4 (7-96)||(36072558-36072647)
chr4 (5-62)||(36786172-36786229)
chr4 (26-83)||(38949683-38949740)
chr4 (5-45)||(3435189-3435229)
chr4 (1-53)||(8826896-8826948)
chr4 (13-45)||(14351302-14351334)
chr4 (1-45)||(21003997-21004041)
chr4 (16-52)||(23599851-23599887)
chr4 (12-52)||(31089954-31089994)
chr4 (20-52)||(48860562-48860594)
chr4 (5-45)||(51126166-51126206)
chr4 (17-89)||(54508164-54508236)
chr4 (5-45)||(54787021-54787061)
chr4 (10-90)||(56364320-56364400)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-79)||(89603-89681)
[»] scaffold0149 (1 HSPs)
scaffold0149 (15-93)||(24677-24755)
[»] scaffold0065 (2 HSPs)
scaffold0065 (15-76)||(39180-39241)
scaffold0065 (5-75)||(36915-36985)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-62)||(145990-146051)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-73)||(40464-40536)
[»] scaffold0756 (1 HSPs)
scaffold0756 (5-52)||(3550-3597)
[»] scaffold0635 (1 HSPs)
scaffold0635 (5-52)||(5420-5467)
[»] scaffold0542 (1 HSPs)
scaffold0542 (5-52)||(3475-3522)
[»] scaffold1266 (1 HSPs)
scaffold1266 (15-52)||(201-238)
[»] scaffold0470 (1 HSPs)
scaffold0470 (1-82)||(3973-4054)
[»] scaffold1137 (1 HSPs)
scaffold1137 (25-77)||(1069-1121)
[»] scaffold0172 (1 HSPs)
scaffold0172 (5-45)||(11623-11663)
[»] scaffold0111 (1 HSPs)
scaffold0111 (12-52)||(38385-38425)


Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 4 - 211
Target Start/End: Original strand, 44089486 - 44089691
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatataatatatttat 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||    
T  44089486 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttaattttgacttataataatgatcaaagggtgtatata--atatttat 44089583  T
Q  104 tgttagaactatatgtacacatgaccctcactatactgtatttctgggtccgtccctgattgtacccnnnnnnnntcatgtcgtagaggatctcggttgt 203  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||  ||||||||        |||||||||||||||||||||||||    
T  44089584 tgttagaactatatgcacacatggccctcactatactgtatttctgggtccgtccctagttgtacccaaaaaaaatcatgtcgtagaggatctcggttgt 44089683  T
Q  204 tcttttca 211  Q
    || |||||    
T  44089684 tcatttca 44089691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 27328312 - 27328396
Alignment:
Q  8 tctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  27328312 tctataatatagaccacatacat-atgtattgaatgaatttaaaatgttgattttgacttataatagtgatcagaggatatatata 27328396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11093613 - 11093524
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||| |||| || ||||||||||||||||||| || ||||| ||| |||||| |||||||| |||||||||| |||||||||| |||||    
T  11093613 tatatagtctttattatagaccacatacatcatttaatgaatcaatctaaaatattgatttttacttataatagtgatcagaggttgtat 11093524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1961366 - 1961438
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||| || ||||||||||||||||||| || ||||||||| |||||||||||||||  |||||||||    
T  1961366 tatatggtctttattatagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 1961438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 27328819 - 27328888
Alignment:
Q  90 tataatatatttattgttagaactatatgtacacatgaccctcactatactgtatttctgggtccgtccc 159  Q
    ||||||||||||||||||| |||||||| |||||||  ||||||||||||  |||||||| |||||||||    
T  27328819 tataatatatttattgttaaaactatatatacacatagccctcactatacgatatttctgagtccgtccc 27328888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38465872 - 38465783
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||| || ||| ||||||||||||||| || ||||| ||| |||||||||||||||  ||||||||| ||| | ||||||||||    
T  38465872 tatatggtctttattatggaccacatacatcatttaatgaattaatctaaaatgttgatttttgcttataatagtgaccggagggtgtat 38465783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 32308321 - 32308405
Alignment:
Q  6 ggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||||||||||| ||||||||| || |||| |||||||||| || ||| |||||  ||||||||| ||||| ||||||||||    
T  32308321 ggtctataatatagatcacatacataatttattaaatgaatttataaggttaatttttgcttataatagtgatcggagggtgtat 32308405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7079453 - 7079370
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagg 84  Q
    ||||||||||  | ||||||||||||| ||||| || || ||||||||||||||||||||||  ||||||||| ||||| ||||    
T  7079453 tatatggtcttaattatagaccacatatatcatttaatggatgaatttaaaatgttgatttttgcttataatagtgatcggagg 7079370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 15119860 - 15119769
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    ||||| |||| || ||||||||||||||||||| || ||||||||| ||||||||| |||||  ||||||||| ||| |  |||||||||||    
T  15119860 tatattgtctttattatagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccgaagggtgtatat 15119769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 3198037 - 3197987
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||    
T  3198037 tggtctataatatgaactacatacatcatgtattgaatgaatttaaaatgt 3197987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27331816 - 27331905
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||| || ||||||| |||| |||||||||||  ||||||||||| |||||||||||||||  ||||||||| ||| | |||| |||||    
T  27331816 tatattgtttataataaagactacatacatcattaattgaatgaatctaaaatgttgatttttgcttataatagtgaccggaggatgtat 27331905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 45472480 - 45472415
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||| ||||||||||| |||||||||||||||||| ||  ||||| |||||||||| |||||    
T  45472480 atatagactacatacatcatttattgaatgaatttaaaaagtaaatttttacttataatagtgatc 45472415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 15859620 - 15859544
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtata 91  Q
    ||||||| |||||||| || || ||||||||||| || |||||||||| |||||||||| ||||| || ||||||||    
T  15859620 tatagacaacatacattatttaatgaatgaatttgaattgttgatttttacttataatagtgatcggaaggtgtata 15859544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31024254 - 31024182
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||| |||| || ||| ||||||||||||||| || ||||||||| |||||||||||||||  |||||||||    
T  31024254 tatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 31024182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32630463 - 32630535
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||| || ||||||| ||||||||||| || ||||| ||| ||||||||||||||| | ||||||||    
T  32630463 tatatggtctttattatagactacatacatcatttaatgaataaatctaaaatgttgatttttatttataata 32630535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 21183400 - 21183475
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||  ||||||| | ||| | |||| |||||||    
T  21183400 tagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataacagtgaccggaggatgtatat 21183475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31102006 - 31102097
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    |||||| ||| || |||| |||||||||||||| || ||||||||| |||||||   | |||  ||||||||||||||| ||||||||||||    
T  31102006 tatatgatctttattataaaccacatacatcatttaatgaatgaatctaaaatgcaaacttttgcttataataatgatcggagggtgtatat 31102097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 10996325 - 10996251
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||||||| |||||| |||||||||  ||| |||||||||||||| |  |||||  |||||||||||||||    
T  10996325 tggtctataataaagaccatatacatcattaattcaatgaatttaaaatataaatttttgcttataataatgatc 10996251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13295442 - 13295496
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    |||||| ||||||||||| |||||||| ||||| ||||||||||| |||||||||    
T  13295442 tatatgatctataatatataccacatatatcatttattgaatgaacttaaaatgt 13295496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37195109 - 37195195
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtg 87  Q
    |||||||||| || ||||||||||||||||||| || |||| ||||  |||||| | ||||| ||||||| || ||||| |||||||    
T  37195109 tatatggtctttattatagaccacatacatcatttaatgaaagaatcaaaaatgataatttttacttatattagtgatcggagggtg 37195195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 10602355 - 10602440
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||| |||||| |||||||||  |||||||||| ||||| |||  |||||  ||||||||| ||| | ||||||||||    
T  10602355 tggtctataataaagaccatatacatcattaattgaatgaacttaaattgtatattttttcttataatagtgaccggagggtgtat 10602440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41805357 - 41805304
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatg 54  Q
    |||||||||||||||| |||| | |||||||||  |||||||||||||||||||    
T  41805357 tatatggtctataataaagactatatacatcattaattgaatgaatttaaaatg 41805304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 44868591 - 44868534
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||| ||||||||||||||| |||| |||  ||||||| |||||||||||||||||||    
T  44868591 tggtatataatatagaccacgtacaacattaattgaataaatttaaaatgttgatttt 44868534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 13333521 - 13333441
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| | || ||||||||||| || |||||| || ||||| |||||||||  ||||||||| |||||||| |||||||    
T  13333521 tataatacaaactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatcagatggtgtat 13333441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 15900288 - 15900364
Alignment:
Q  13 aatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||| |||||||||||||||| |||| ||| ||| |||||| || ||||| | |||||||| |||||||| ||||||    
T  15900288 aataaagaccacatacatcatttattaaataaatgtaaaatattaatttttatttataatagtgatcagaaggtgta 15900364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 15916802 - 15916722
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatataat 95  Q
    ||||||| |||||||| || || ||||||||| |||||| ||||||||  ||||||||| ||| | || ||||||||||||    
T  15916802 tatagactacatacattatttaatgaatgaatctaaaatattgatttttgcttataatactgacctgatggtgtatataat 15916722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 25270930 - 25270850
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| |||| ||||||||||| || |||||| || ||||| |||||||||  ||||||||| ||| |||| |||||||    
T  25270930 tataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgaccagatggtgtat 25270850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26003518 - 26003422
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatataatat 97  Q
    |||||||||| || |||| || ||||||||||| || ||||||||  |||||| ||||||||  ||||||||  ||| | |||||||||| ||||||    
T  26003518 tatatggtctttattatatactacatacatcatttaatgaatgaacctaaaatattgatttttgcttataattgtgaccggagggtgtatttaatat 26003422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 37182887 - 37182927
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  37182887 tatagaccacatacatcatttaatgaatgaatttaaaatgt 37182927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 38181827 - 38181767
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||| |||||||||||| || ||||||||| |||||| ||||||||  |||||||||||||    
T  38181827 tagatcacatacatcatttaatgaatgaatctaaaatattgatttttgcttataataatga 38181767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 41056962 - 41056882
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| |||| ||||||||||| || |||||| || |||||  ||||||||  ||||||||| |||||||| |||||||    
T  41056962 tataatacagactacatacatcatttaatgaatgtatctaaaacattgatttttgcttataatagtgatcagatggtgtat 41056882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 43426702 - 43426642
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttata 70  Q
    ||||||| ||||||||||||||||  |||||||| |||||||| || |||||| |||||||    
T  43426702 tataataaagaccacatacatcattaattgaatgtatttaaaaagtggatttttacttata 43426642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 4637068 - 4637115
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||| ||||||||||||||  ||||||||||| |||||    
T  4637068 tggtctataatataaaccacatacatcattaattgaatgaatctaaaa 4637115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 5574176 - 5574259
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    ||||||| ||||||||||||||||  |||||||| || ||||| || ||||||  |||||| || ||| | |||||||||||||    
T  5574176 tataataaagaccacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgtatata 5574259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 10041603 - 10041650
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||| ||||||||||||||||||||||||  |||||||||| ||||||    
T  10041603 tggtttataatatagaccacatacatcattaattgaatgaacttaaaa 10041650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17844008 - 17844059
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||| |||||||| |||||||||||||||  |||||||||| ||||||    
T  17844008 tatatggtttataatatggaccacatacatcattaattgaatgaacttaaaa 17844059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 32800785 - 32800718
Alignment:
Q  6 ggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||||||||||||| ||||||||| || |||| ||| || |||||| |||||||||  |||||||||    
T  32800785 ggtctataatatagatcacatacataatttattaaattaaattaaaaggttgatttttgcttataata 32800718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 32630483 - 32630413
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||| |||||| |||||||||  |||||||||||  ||||||| ||||||   ||||||||||||    
T  32630483 gtctataataaagaccatatacatcattaattgaatgaatccaaaatgtagatttttgtttataataatga 32630413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 45473146 - 45473084
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    ||||||| ||||||||||| || ||||||||| |||||| || ||||| | ||||||||||||    
T  45473146 tatagacaacatacatcatttaatgaatgaatctaaaattttaatttttaattataataatga 45473084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 2544412 - 2544469
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||| ||||||||||||| ||||||||| || ||||||||  ||||| |||||||||    
T  2544412 tggtcaataatatagaccaaatacatcatttaatgaatgaacctaaaaagttgatttt 2544469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 11153284 - 11153235
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatg 54  Q
    |||||||||||| || |||||||||||||  ||||||||||| |||||||    
T  11153284 tggtctataataaagcccacatacatcattaattgaatgaatctaaaatg 11153235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19951502 - 19951563
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||| ||||||||| ||| || |||||||||  ||||||||||| |||||| ||||||||    
T  19951502 tatatgatctataataaagagcatatacatcattaattgaatgaatataaaatattgatttt 19951563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 25312542 - 25312501
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    |||||||| ||||| ||||||||||||||| |||||||||||    
T  25312542 atggtctacaatatggaccacatacatcatatattgaatgaa 25312501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 26003501 - 26003562
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataa 71  Q
    ||||||| |||||| |||||||||  ||||||||||| |||||||| ||||||  |||||||    
T  26003501 tataataaagaccatatacatcattaattgaatgaatctaaaatgtagatttttgcttataa 26003562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29765721 - 29765782
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||||| ||||||||||||| |||| ||||  |||| ||||||| ||||| |||||||||    
T  29765721 tatatggtttataatatagaccgcatatatcacttattcaatgaatctaaaaagttgatttt 29765782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 38465850 - 38465907
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||| |||||| |||||| |||||||||  ||||||||||| |||||||| ||||||    
T  38465850 tggtccataataaagaccatatacatcattaattgaatgaatctaaaatgtagatttt 38465907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 41805331 - 41805420
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||| |||| || ||||||||| ||||||||| || ||| ||||| |||||||   | |||  ||||||||||||| ||||||||||||    
T  41805331 tatatagtctttattatagaccatatacatcatttaatgagtgaatctaaaatgcaaagttttgcttataataatgaccagagggtgtat 41805420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 1961388 - 1961304
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||||| |||||| |||||||||  ||| ||  ||| ||||||||  |||||  ||||||||| ||||| |||||||||    
T  1961388 tggtctataataaagaccatatacatcattaattaaacaaatctaaaatgtaaatttttgcttataatagtgatcggagggtgta 1961304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 3098200 - 3098120
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| |||| ||||||||||| || | |||| || ||||| |||||||||  ||||||||||| | |||| |||||||    
T  3098200 tataatacagactacatacatcatttaataaatgtatctaaaacgttgatttttgcttataataataaccagatggtgtat 3098120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 14952841 - 14952797
Alignment:
Q  8 tctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||| |||||||| |||| |||||| ||||||||||||||||||    
T  14952841 tctattatatagactacatgcatcatttattgaatgaatttaaaa 14952797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 15119838 - 15119922
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||||| |||| | |||||||||  | ||||| ||| |||||||| ||||||  ||||||||| ||| | |||||||||    
T  15119838 tggtctataataaagacaatatacatcattaaatgaataaatctaaaatgtagatttttgcttataatagtgaccggagggtgta 15119922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 23378015 - 23378087
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||| |||||||||||| || | ||||||| |||||| || |||||  ||||||||||||| | |||||||||    
T  23378015 tagatcacatacatcatttaataaatgaatctaaaatattaatttttgcttataataatgaccggagggtgta 23378087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 38618464 - 38618400
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    ||||||||||||||||||| ||  |||||||| |||||||||  |||| ||||||| || |||||    
T  38618464 tatagaccacatacatcatttaacgaatgaatctaaaatgttagtttttacttatattattgatc 38618400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 41824330 - 41824386
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttata 70  Q
    |||||||||||||||||||| |||||||||||  ||||| ||  ||||| |||||||    
T  41824330 atatagaccacatacatcatttattgaatgaacctaaaaagtcaatttttacttata 41824386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 2e-29; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 13964499 - 13964414
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||    
T  13964499 atggtctataatatagaccacatacatcatttattgaatgaatttaaaatgttgatttttgcttataatagtgaccagagggtgta 13964414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 44099041 - 44098915
Alignment:
Q  35 tattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatataatatatttattgttagaactatatgtacacatgaccctcac 134  Q
    ||||||||||||||||||||||||||||   ||||||||||||  | |  ||  |||||||||||||||||| |||| ||||| ||||||||| ||||||    
T  44099041 tattgaatgaatttaaaatgttgatttttgtttataataatgactaaaaagtacatataatatatttattgtcagaaatatatatacacatgaacctcac 44098942  T
Q  135 -tatactgtatttctgggtccgtccct 160  Q
     ||||  ||||||||||||||||||||    
T  44098941 ttataaggtatttctgggtccgtccct 44098915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 571475 - 571551
Alignment:
Q  85 gtgtatataatatatttattgttagaactatatgtacacatgaccctcactatactgtatttctgggtccgtccctg 161  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||| |||||||||| ||||||||||    
T  571475 gtgtatataatatatttattgctagaaatatatatacacatggccctcactatacggtatttctggatccgtccctg 571551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 7484674 - 7484763
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||| |||| || ||| ||||||||||||||| || ||||||||| |||||||||||||||  ||||||||||||| |  |||||||||    
T  7484674 tatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataataatgaccgtagggtgtat 7484763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 41753827 - 41753758
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagg 84  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||  ||||||||| ||| ||||||    
T  41753827 tatagaccacatacatcatttaatgaatgaatttaaaatgttgaattttgcttataatagtgaccagagg 41753758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 10934676 - 10934748
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||  ||||||||| ||| | |||||||||    
T  10934676 tagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgta 10934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 11295743 - 11295657
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtata 91  Q
    |||| ||||||| |||||||||||||||| || |||||| || |||||||||||||||  ||||||||| ||| | || ||||||||    
T  11295743 tggtttataataaagaccacatacatcatttaatgaatgtatctaaaatgttgatttttgcttataatagtgaccggaaggtgtata 11295657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 39099611 - 39099676
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataat 75  Q
    ||||||||||| |||||| || || |||||| |||||||||||||||||||||  |||||||||||    
T  39099611 tataatatagatcacatatattatttattgactgaatttaaaatgttgatttttgcttataataat 39099676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5888419 - 5888331
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||| || ||||||| ||||||||||| || ||||||||| ||||| ||| |||||  ||||||||| ||| ||||| |||||    
T  5888419 tatatggtctttattatagacaacatacatcatttaatgaatgaatctaaaacgttaatttttgcttataatagtgaccagagcgtgta 5888331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 9015878 - 9015950
Alignment:
Q  6 ggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgat 78  Q
    ||||||||||| ||| || |||||||||  ||||||||||| |||||| | |||||| |||||||||||||||    
T  9015878 ggtctataataaagatcatatacatcattaattgaatgaatctaaaatatagatttttacttataataatgat 9015950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 4613623 - 4613705
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| || |||||||||| ||||| |||||||||||||||||||||  ||||| |||||||||| ||| || || ||||||    
T  4613623 gtctatattaaagaccacata-atcatttattgaatgaatttaaaatgtcaatttttacttataatagtgaccatagagtgtat 4613705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 43295949 - 43295996
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  43295949 tggtccatattatagaccacatacatcatttattgaatgaatttaaaa 43295996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 3225859 - 3225781
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttga-ttttgacttataataatgatcaga 82  Q
    |||||||||||| ||| || |||||||||  ||||||| |||||||||||| || |||| |||||||||||||| ||||    
T  3225859 tggtctataataaagatcatatacatcattaattgaataaatttaaaatgtagattttttacttataataatgaccaga 3225781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 17871840 - 17871762
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagaggg 85  Q
    ||||||| ||| ||||| ||||||||| || ||||||||  ||||| |||||||||  ||||||||||||| |||||||    
T  17871840 gtctatattattgaccaaatacatcatttaatgaatgaacctaaaaagttgatttttgcttataataatgaccagaggg 17871762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18603515 - 18603597
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagag 83  Q
    |||||| ||| || |||| |||||||||||||| || | ||| ||| ||||||||| ||||| | ||||||||||||||||||    
T  18603515 tatatgatctttattatataccacatacatcatttaattaataaatctaaaatgttaatttttaattataataatgatcagag 18603597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 24471263 - 24471181
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtg 87  Q
    |||| ||||||| |||| ||||||||||| |  |||||| ||||||||||||||||||  ||||||||| ||| | |||||||    
T  24471263 tggtttataataaagactacatacatcattttatgaatgtatttaaaatgttgatttttgcttataatagtgaccggagggtg 24471181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 43295967 - 43295917
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    ||||||||||||| |||||||||||||||  ||||||||||| ||||||||    
T  43295967 tggtctataatatggaccacatacatcattcattgaatgaatctaaaatgt 43295917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 2296554 - 2296469
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||||| || ||||||||| ||||||||| || ||||||||| ||||||||  | |||  ||||||||||||||| |||| ||||    
T  2296554 atggtctttattatagaccatatacatcatttaatgaatgaatctaaaatgtaaaattttgcttataataatgatcggaggatgta 2296469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3225837 - 3225914
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgat 78  Q
    |||||| ||| || ||||||||||||||||||| || ||||||||   ||||| ||||||||  ||||||||||||||    
T  3225837 tatatgatctttattatagaccacatacatcatttaatgaatgaaccaaaaatattgatttttgcttataataatgat 3225914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 6189695 - 6189752
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||| ||||||||||| | ||||||||| |||||||||||| ||||| |||||||||    
T  6189695 tggtcaataatatagactaaatacatcatttattgaatgaatctaaaacgttgatttt 6189752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 27502963 - 27502906
Alignment:
Q  22 cacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||||||| || ||||||||||||||||||| |||||  ||||||||| |||||    
T  27502963 cacatacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgatc 27502906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 45045440 - 45045517
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagg 84  Q
    |||||||||| |||||| |||||||||  ||||||||||| |||||| | ||||||   |||||||| ||||||||||    
T  45045440 gtctataataaagaccatatacatcattaattgaatgaatctaaaatatagatttttgtttataatagtgatcagagg 45045517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 13080167 - 13080084
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||| || || |||| ||||||||||| || ||||||||| ||||||||||||||||  |||||||| |||  ||||||||||    
T  13080167 tggtctttattaaagactacatacatcatttaatgaatgaatctaaaatgttgattttg-gttataatagtgacaagagggtgta 13080084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 21435746 - 21435691
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||| |||| ||||||||||||| || ||||||||||||||||||  ||||||||    
T  21435746 gtctacaataaagaccacatacataatttattgaatgaatttaaaacattgatttt 21435691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 28882743 - 28882696
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||| ||||| |||||||||||||| |||||||||||| |||||    
T  28882743 tggtctattatatataccacatacatcatttattgaatgaatctaaaa 28882696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 13080151 - 13080221
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||| ||||| ||||||||||||||||  ||| ||||||| |||||||| ||||||   ||||||||||||    
T  13080151 gtctttaataaagaccacatacatcattaattcaatgaatgtaaaatgtagatttttgtttataataatga 13080221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 17800698 - 17800736
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  17800698 atatagaccacagacatcatttattgaatgaatttaaaa 17800736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 17986259 - 17986201
Alignment:
Q  19 gaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    ||||| ||||||||| || |||||||| ||| || ||||||||| ||||||||||||||    
T  17986259 gaccaaatacatcatttaatgaatgaacttataaagttgatttttacttataataatga 17986201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 24418951 - 24418913
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  24418951 atatagaccacatacatcatttattgaatgaacttaaaa 24418913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 26998730 - 26998816
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtata 91  Q
    ||||||| | ||| ||||| ||||||||| || | ||| ||||||||| ||| ||||| |||||||||||||| || |||| |||||    
T  26998730 tggtctacattattgaccaaatacatcatttaataaataaatttaaaaagttaatttttacttataataatgaccaaagggagtata 26998816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 40098826 - 40098908
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    ||||||| ||||||||||||||||  |||||||| || ||||| || ||||||  |||||| || ||| | ||||||||||||    
T  40098826 tataataaagaccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtgtatat 40098908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6614768 - 6614687
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcaga 82  Q
    ||||| |||| || ||||||||||||| || || || | ||||||| ||||||||||||||| | |||||||| ||| ||||    
T  6614768 tatattgtctttattatagaccacatatataatttagtaaatgaatgtaaaatgttgatttttatttataatagtgaccaga 6614687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 13496496 - 13496581
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||| ||||||  | ||||||  | ||||||||||||||||||  |||||  ||||||||| ||| | ||||||||||    
T  13496496 tggtctataataaagaccatgtgcatcattaaatgaatgaatttaaaatgtaaatttttgcttataatagtgaccggagggtgtat 13496581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 5040141 - 5040097
Alignment:
Q  11 ataatatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    ||||||| |||||||||||||||  ||||||||||| ||||||||    
T  5040141 ataatatggaccacatacatcattaattgaatgaatctaaaatgt 5040097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 7258646 - 7258714
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||||| |||||| || ||||||  ||||||||||| ||||||||  | ||| ||||||||||    
T  7258646 tggtctataataaagaccatatgcatcattaattgaatgaatctaaaatgtaaaattttacttataata 7258714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 8739666 - 8739706
Alignment:
Q  12 taatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||||||||| ||||  ||||||||||||    
T  8739666 taatatagaccacatacatcatttatttcatgaatttaaaa 8739706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 19293095 - 19293055
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    |||||||||||||| ||||||||||||||  ||||||||||    
T  19293095 tggtctataatataaaccacatacatcattgattgaatgaa 19293055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 24017797 - 24017713
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||| ||||| ||| || |||||||||  |||||| |||||||||||| | |||||  ||||||||| | || ||||||||||    
T  24017797 tggtctgtaataaagatcatatacatcattaattgaaggaatttaaaatggtaatttttgcttataatagtaatgagagggtgta 24017713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24017775 - 24017847
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||| ||| || || |||||||||||||||| || | ||| ||| |||||||||||||||  |||||||||    
T  24017775 tatatgatctttattacagaccacatacatcatttaattaataaatctaaaatgttgatttttgcttataata 24017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24287842 - 24287918
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||||||||| |||||| |||||||||  | ||||| ||| |||||||   | ||| ||||||||||||||    
T  24287842 tatatggtctataataaagaccatatacatcattaactgaataaatctaaaatgcaaagttttacttataataatga 24287918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33070248 - 33070196
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaat 53  Q
    |||||||||| || ||||||| ||||||||||| || ||||||||| ||||||    
T  33070248 tatatggtctttattatagactacatacatcatttaatgaatgaatctaaaat 33070196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 36309924 - 36309976
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||| |||||||||  || || || ||||||||||||||||||||||||||||    
T  36309924 tatattatagaccatgtagattatttattgaatgaatttaaaatgttgatttt 36309976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 3e-19; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3549836 - 3549924
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||| ||||| || |||||||||||||||| || || ||||||||||||||||||| |||||  ||||||||||||||||||| |||||    
T  3549836 tatacggtctttattatagaccacatacattatttaatgaatgaatttaaaatgttaatttttgcttataataatgatcagagagtgta 3549924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34953979 - 34953907
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||| || ||||||||||||||||||| || |||||||||||||||| ||||||||  |||||||||    
T  34953979 tatatggtctttattatagaccacatacatcatttaatgaatgaatttaaaatattgatttttgcttataata 34953907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33765844 - 33765920
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||| || ||||||||||||||||||| || | ||||||| |||||||||||||||  |||||||| ||||    
T  33765844 tatatggtctttattatagaccacatacatcatttaataaatgaatctaaaatgttgatttttgcttataattatga 33765920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 41007738 - 41007806
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||||| |||||||||||||||| || ||||||||| ||||||||||| |||  |||||||||    
T  41007738 tggtctataataaagaccacatacatcatttaatgaatgaatctaaaatgttgaattttgcttataata 41007806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48083587 - 48083495
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    |||||| ||| || ||||||||||||||||||| || ||||||||  |||||| || |||||  ||||||||| ||| |||||||||||||||    
T  48083587 tatatgatctttattatagaccacatacatcatttaatgaatgaacctaaaatattaatttttgcttataatagtgaccagagggtgtatata 48083495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 14967290 - 14967359
Alignment:
Q  9 ctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgat 78  Q
    |||||||| ||| |||||||||||| || ||||||||| |||||||||||||||  ||||||||| ||||    
T  14967290 ctataataaagatcacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgat 14967359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 18551330 - 18551407
Alignment:
Q  13 aatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||||||||||||||||| | |||||||||| ||||||||| ||||| | |||||||| ||| || || ||||||    
T  18551330 aatatagaccacatacatcatttgttgaatgaatctaaaatgttaatttttatttataatagtgaccaaagagtgtat 18551407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 50550176 - 50550261
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggt 86  Q
    |||||| ||| || |||||| |||||||||||| || ||||||||| |||||||||||||||   |||||||| ||||| ||||||    
T  50550176 tatatgatctttattatagatcacatacatcatttaatgaatgaatctaaaatgttgatttttctttataatagtgatcggagggt 50550261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 11324496 - 11324568
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||||| ||||| | ||||| || |||||    
T  11324496 gtctataataaagaccatatacatcattaattgaatgaatttaaaatgttaatttttatttatattagtgatc 11324568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 11482517 - 11482589
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||||| ||||| | ||||| || |||||    
T  11482517 gtctataataaagaccatatacatcattaattgaatgaatttaaaatgttaatttttatttatattagtgatc 11482589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 35544602 - 35544555
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  35544602 tatagaccacatacatcatttaacgaatgaatttaaaatgttgatttt 35544555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 14967294 - 14967220
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||| ||||||||||||| || ||||| ||| |||||||||||||||  ||||| ||| ||| |||||||||||    
T  14967294 tataggccacatacatcatttaatgaataaatgtaaaatgttgatttttgcttatgatagtgaccagagggtgta 14967220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 18604476 - 18604530
Alignment:
Q  38 tgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    ||||||||||||||||||||||||| | |||||||| |||||  |||||||||||    
T  18604476 tgaatgaatttaaaatgttgatttttatttataatagtgatcgaagggtgtatat 18604530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 29070678 - 29070728
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    ||||||||||||| ||||||||||||||| |||||||||||  ||||||||    
T  29070678 tggtctataatatggaccacatacatcatttattgaatgaacctaaaatgt 29070728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 34953957 - 34954039
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtg 87  Q
    |||||||||||| |||||| |||||||||  ||||||||||| |||||| |  |||||  ||||||||| ||||| |||||||    
T  34953957 tggtctataataaagaccatatacatcattaattgaatgaatctaaaatataaatttttgcttataatagtgatcggagggtg 34954039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 37589668 - 37589730
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    ||||||||| ||||||||| || | || |||||||||||||||||||| | ||||||||||||    
T  37589668 tatagaccatatacatcatctaataaaggaatttaaaatgttgatttttatttataataatga 37589730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 50308689 - 50308763
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    ||||| |||| |||||||| ||||||||| || |||||||| ||||||||||| ||||  ||||||||| |||||    
T  50308689 tggtcaataacatagaccaaatacatcatttaatgaatgaacttaaaatgttggtttttgcttataatagtgatc 50308763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 10256851 - 10256786
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||||||||||||||| |||||||||||| ||||| ||  |||||  ||||||||| |||||    
T  10256851 atatagaccacatacatcatttattgaatgaatctaaaaagtgaattttttcttataatagtgatc 10256786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 10831123 - 10831074
Alignment:
Q  40 aatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||||||||||| ||||||||| |||||||||||||||| | |||||||    
T  10831123 aatgaatttaaaacgttgatttttacttataataatgatcggtgggtgta 10831074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 26674247 - 26674296
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatg 54  Q
    |||||||||||| |||||| |||||||||  |||||||||||||||||||    
T  26674247 tggtctataataaagaccatatacatcattaattgaatgaatttaaaatg 26674296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 40611010 - 40610965
Alignment:
Q  35 tattgaatgaatttaaaatgttgattttgacttataataatgatca 80  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||    
T  40611010 tattgaatgaatttaaaatgttaatttttatttataataatgatca 40610965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 41007756 - 41007699
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||| || ||||||||||||||||||| || ||||| |||||||||| ||||||||    
T  41007756 tggtctttattatagaccacatacatcatttaatgaataaatttaaaatattgatttt 41007699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25547528 - 25547600
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||| ||||||| | ||||||||| || ||||||||||| |||||||||| |  || ||||||||||    
T  25547528 tatatggtctttaatatatatcacatacattatttattgaatgaacttaaaatgttaaaatttacttataata 25547600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 39940544 - 39940627
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagaggg 85  Q
    |||||||| |||| ||||||| |||||||| || |||||||||||| ||||| ||  ||||| |||||||||| ||||| |||||    
T  39940544 tatatggtttata-tatagactacatacattatttattgaatgaatctaaaaagtaaatttttacttataatagtgatcggaggg 39940627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 14885388 - 14885341
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||||||||||||| || || ||||| |||||||||||||||||||    
T  14885388 tatagaccacatacataatttaatgaataaatttaaaatgttgatttt 14885341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 14885546 - 14885499
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||||||||||||| || || ||||| |||||||||||||||||||    
T  14885546 tatagaccacatacataatttaatgaataaatttaaaatgttgatttt 14885499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 20621299 - 20621252
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||||||||||||||| | |||||||||||| |||||| ||||||||    
T  20621299 tatagaccacatacatcgtttattgaatgaatctaaaatattgatttt 20621252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 27544069 - 27544007
Alignment:
Q  16 atagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    ||||||||||||||| || ||| |||||||| ||||||||  ||||| ||||||||||||||||    
T  27544069 atagaccacatacataatttat-gaatgaatataaaatgtacatttttacttataataatgatc 27544007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 43318088 - 43317997
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatataat 95  Q
    |||||||||| ||||||| |||||||  || |||||||||||  ||||| ||||||||| | ||||||||  ||| ||| ||||||| ||||    
T  43318088 atggtctatattatagactacatacacaatttattgaatgaacctaaaacgttgatttttatttataatagcgataagaaggtgtatgtaat 43317997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 45115231 - 45115318
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    |||||||||||| ||||||  | ||||||  | ||||||||| |||||||| ||||||  ||||||||| ||| | ||||||||||||    
T  45115231 tggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggtgtatat 45115318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 46412763 - 46412834
Alignment:
Q  19 gaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||| |||||||||  |||||||||||  |||||||  ||||| |||||||||| ||||| ||||||||||    
T  46412763 gaccatatacatcattaattgaatgaatccaaaatgtaaatttttacttataatagtgatcggagggtgtat 46412834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 47446701 - 47446760
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||| ||||||||||| |||||||||||||||||| ||   |||| ||||||||||    
T  47446701 atatagactacatacatcatttattgaatgaatttaaaaagtgagtttttacttataata 47446760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 50550195 - 50550124
Alignment:
Q  8 tctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    ||||||||| ||| || |||||| ||  |||||||||||||| |||||||||||| | |||||||| |||||    
T  50550195 tctataataaagatcatatacattattaattgaatgaatttataatgttgatttttatttataatagtgatc 50550124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1597246 - 1597324
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||| ||| || ||| ||||| ||| ||||| || ||||| |||||||||| || ||||| ||||||||||||||||    
T  1597246 tatatgatctttattatcgaccatatatatcatttaatgaataaatttaaaatattaatttttacttataataatgatc 1597324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 6156700 - 6156626
Alignment:
Q  18 agaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    |||||| ||||||||| |||||||||||| ||||| |||||||||   |||||||| ||||| || || ||||||    
T  6156700 agaccaaatacatcatttattgaatgaatctaaaaagttgatttttgtttataatagtgatcggaaggagtatat 6156626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 19175664 - 19175734
Alignment:
Q  20 accacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||||| |||||||||||| ||||| || ||||||  ||||||||| |||   ||||||||||    
T  19175664 accacatacatcatttattgaatgaatctaaaaagtagatttttgcttataatagtgactggagggtgtat 19175734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 19771219 - 19771177
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||    
T  19771219 tataatatagaccatatacaacatttattgaatgaatttaaaa 19771177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 24981912 - 24981970
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||| ||| |||||||||| || ||||||||| |||||||||||||||  |||||||||    
T  24981912 tataaaccgcatacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 24981970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 42660425 - 42660463
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  42660425 atatagaccacatacatcatttattgaatgattttaaaa 42660463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 52112946 - 52112908
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  52112946 atatagaccacatacatcatttattgaatgaatataaaa 52112908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 5431413 - 5431458
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||||||||||||||| |||||||||||| ||||| ||| |||||    
T  5431413 tagaccacatacatcatttattgaatgaatctaaaaagttaatttt 5431458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 8984265 - 8984220
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||| |||| |||||||||||||||| |||||||||||| |||||    
T  8984265 gtctacaataaagaccacatacatcatttattgaatgaatctaaaa 8984220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 15351778 - 15351823
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||| |||| |||||||||||||||| |||||||||||| |||||    
T  15351778 gtctacaataaagaccacatacatcatttattgaatgaatctaaaa 15351823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 24807968 - 24807923
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||| || ||||||||||||||||| ||||||||||| ||||||    
T  24807968 gtctattatgtagaccacatacatcatatattgaatgaagttaaaa 24807923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 27068816 - 27068771
Alignment:
Q  48 taaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    ||||||||||||||| |||||||||| |||||| | ||||||||||    
T  27068816 taaaatgttgatttttacttataatagtgatcatatggtgtatata 27068771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 38824358 - 38824399
Alignment:
Q  11 ataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||||||||||  ||||||||||| |||||    
T  38824358 ataatatagaccacatacatcattaattgaatgaatctaaaa 38824399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 48022669 - 48022588
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtata 91  Q
    ||||||| ||||||||||||||||  |||||||| || ||||| || ||||||  |||||| || ||| | |||||||||||    
T  48022669 tataataaagaccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtgtata 48022588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1597272 - 1597196
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    ||||||||| |||||| ||| || |||||||||  ||||||| ||||||||||||  |||||   ||||||||||||    
T  1597272 tatatggtcgataataaagatcatatacatcattaattgaataaatttaaaatgtatattttcgtttataataatga 1597196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 3549858 - 3549790
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||||| |||||  ||| |||||  ||||||||||| |||||||| ||||||  |||||||||    
T  3549858 tggtctataataaagaccgtatatatcattaattgaatgaatctaaaatgtagatttttgcttataata 3549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 6079142 - 6079202
Alignment:
Q  23 acatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagag 83  Q
    ||||||||||| |||||||||||| ||||| || ||||||  ||||||||| ||| |||||    
T  6079142 acatacatcatttattgaatgaatctaaaaggtggattttttcttataatagtgaccagag 6079202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14891795 - 14891847
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaat 53  Q
    |||||||||||||||| |||||| ||||||||| ||||| || ||| ||||||    
T  14891795 tatatggtctataataaagaccatatacatcatttattggataaatctaaaat 14891847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 15351782 - 15351746
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaat 53  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  15351782 tagacaacatacatcatttattgaatgaatttaaaat 15351746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 19175656 - 19175580
Alignment:
Q  16 atagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    |||||||||||||||||| |||||||||||  ||||| ||  | ||| |||||||||| ||| | ||| ||||||||    
T  19175656 atagaccacatacatcatttattgaatgaacctaaaaagtgaaattttacttataatagtgaccggagagtgtatat 19175580  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 29043525 - 29043461
Alignment:
Q  13 aatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    ||||||||| | |||| |||| |||||||||||  ||||| |||||||||  |||||||||||||    
T  29043525 aatatagactaaatacgtcatttattgaatgaacctaaaaagttgatttttgcttataataatga 29043461  T

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Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 29070696 - 29070656
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  29070696 tggtccatattatagaccacatacatcatttattgaatgaa 29070656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 31909828 - 31909788
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    |||| ||||||||||||||||||||||||  ||||||||||    
T  31909828 tggtttataatatagaccacatacatcattaattgaatgaa 31909788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 33400687 - 33400619
Alignment:
Q  22 cacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||| || ||||||||  |||||| | ||||||  ||||||||||||| ||||| ||||||    
T  33400687 cacatacatcatttactgaatgaacctaaaatttagattttttcttataataatgaccagagagtgtat 33400619  T

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Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 33604057 - 33604137
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| ||||||||||||||||  |||||||| || ||||| || ||||||  |||||| || ||| | ||||||||||    
T  33604057 tataataaagaccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtgtat 33604137  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42761536 - 42761460
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    ||||| |||||||||| ||| || |||||||||  ||||||||||| ||||||||  | |||  |||||||||||||    
T  42761536 tatatagtctataataaagatcagatacatcattaattgaatgaatctaaaatgtaaagttttgcttataataatga 42761460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 46906927 - 46907007
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| |||| ||||||||||| || |||||| || ||||| |||||||||  ||||||| | ||| |||| |||||||    
T  46906927 tataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataacagtgaccagatggtgtat 46907007  T

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Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 13710361 - 13710438
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    |||||||| ||||||| || || ||||| ||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  13710361 tatagacctcatacattatttaatgaataaatataaaatgttgatttttacttataataatgatcagatggtgtatat 13710438  T

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Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 15712187 - 15712266
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||||| ||||||||||||||||  |||||||| |||||||| |||||||||  |||||| |||||||| |||||||||    
T  15712187 tataataaagaccacatacatcattaattgaatgtatttaaaaagttgatttttgcttatattaatgatcggagggtgta 15712266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 13356213 - 13356285
Alignment:
Q  20 accacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    |||||||||||||| ||||||||||| |||||| || ||||||  ||||||||||||| | ||||||||||||    
T  13356213 accacatacatcatttattgaatgaacttaaaaagtagatttttgcttataataatgaccggagggtgtatat 13356285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 31785937 - 31786021
Alignment:
Q  6 ggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||||||||||| ||||||||| || |||| ||||||||||||| |||||||||  ||||||| | ||| |||| |||||||    
T  31785937 ggtctataatatagatcacatacataatttattaaatgaatttaaaaggttgatttttgcttataacagtgaccagaaggtgtat 31786021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 3100488 - 3100405
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagg 84  Q
    |||||| ||| || ||||||| ||||||||||| |||||||||||| ||||||||| |||||  ||||||||| |||| |||||    
T  3100488 tatatgatctttattatagactacatacatcatttattgaatgaatctaaaatgttaatttttgcttataatagtgattagagg 3100405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 13391608 - 13391529
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggt 86  Q
    ||||||| ||| ||||| ||||||||| |||||||||||| ||||| ||||| ||| |||||||||| ||| ||||||||    
T  13391608 gtctatattattgaccaaatacatcatttattgaatgaatctaaaaagttgacttttacttataatagtgaccagagggt 13391529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 39785127 - 39785169
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  39785127 tataatatagaccacatacatcatttattgaatgaatttaaaa 39785169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 11795815 - 11795758
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||||||||| |||||| |||||||||  ||||||||||| |||||||||||||||    
T  11795815 tggtctataataaagaccatatacatcattaattgaatgaatctaaaatgttgatttt 11795758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41005751 - 41005678
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataa 74  Q
    |||||||||  || ||||||| ||||||||||| || | ||||||| ||||||||||||||| |||||||||||    
T  41005751 tatatggtcgttagtatagactacatacatcatttaataaatgaatctaaaatgttgatttttacttataataa 41005678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11795793 - 11795869
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||| || ||||||||||||| ||||| || |||||||||  ||||| ||||||||  |||||||||||||    
T  11795793 tatatggtctttattatagaccacatatatcatttaatgaatgaataaaaaatattgatttttgcttataataatga 11795869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 17625706 - 17625786
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| |||| ||||||||||| || |||||| || ||||| |||||||||  ||||||||| |||||||| |||||||    
T  17625706 tataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatcagatggtgtat 17625786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33075122 - 33075214
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    |||||| ||| || ||||||||||||||||||| || ||||||||  |||||| || |||||  ||||||||| ||| |||| ||||||||||    
T  33075122 tatatgatctttactatagaccacatacatcatttaatgaatgaacctaaaatattaatttttgcttataatagtgaccagatggtgtatata 33075214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 36897821 - 36897753
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||| || |||| |||||||||||||| |||| ||||||||||||||||  ||||| ||||||||||    
T  36897821 tggtctttattataaaccacatacatcatttatttaatgaatttaaaatgtaaatttttacttataata 36897753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 33867998 - 33868060
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    ||||||||||||||||| || ||||| | | |||||||||||||||  |||||||||||||||    
T  33867998 tagaccacatacatcatttagtgaataattataaaatgttgatttttgcttataataatgatc 33868060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 36138424 - 36138374
Alignment:
Q  18 agaccacatacatcatgtattgaatgaatttaaaatgttgattttgactta 68  Q
    |||||||||||||||| |||||||||||||||||||||  ||||| |||||    
T  36138424 agaccacatacatcatttattgaatgaatttaaaatgtcaatttttactta 36138374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 3851437 - 3851356
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtata 91  Q
    ||||||| ||||||||||||||||  |||||||| || ||||| || ||||||  |||||| || ||||| |||||||||||    
T  3851437 tataataaagaccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatcggagggtgtata 3851356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 17967394 - 17967317
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcaga 82  Q
    |||||| |||||||||| |||||||| || |||||||||||  ||||||||| | ||| | ||| |||||||||||||    
T  17967394 tggtctttaatatagacaacatacattatttattgaatgaacgtaaaatgttaaattttatttaaaataatgatcaga 17967317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 71338 - 71254
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||||| ||| || |||||||||  ||||||||||| |||||| | ||||||  ||||||||| ||| | |||||||||    
T  71338 tggtctataataaagatcatatacatcattaattgaatgaatctaaaatatagatttttgcttataatagtgaccggagggtgta 71254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 1098698 - 1098634
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgat 78  Q
    |||||||||||||||||||| |||||||||||| ||||| ||  | ||| |||||||||| ||||    
T  1098698 atatagaccacatacatcatttattgaatgaatctaaaaagtcaacttttacttataatagtgat 1098634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 3100468 - 3100540
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||||| ||| || |||||||||  ||||||||||| ||||||||  ||||| |||||||||| |||||    
T  3100468 gtctataataaagatcatatacatcattaattgaatgaatctaaaatgtaaattttcacttataatagtgatc 3100540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 10437708 - 10437784
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtata 91  Q
    ||||||| |||||||| || || | ||||||| |||||||||||||||  ||||||||| ||| | |||||||||||    
T  10437708 tatagactacatacataatttaataaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgtata 10437784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 10495287 - 10495243
Alignment:
Q  8 tctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||| |||||||||||||| |||||||||||| |||||    
T  10495287 tctataatataaaccacatacatcatttattgaatgaatctaaaa 10495243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 23914915 - 23914827
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatataatata 98  Q
    ||||||| ||||||||||||||||  |||||||| || ||||| || ||||||  |||||| || ||| | ||||||||||||| ||||    
T  23914915 tataataaagaccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtgtatatagtata 23914827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 24089121 - 24089081
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  24089121 tggtctataatatggaccacatacatcatttattgaatgaa 24089081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30371416 - 30371340
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||| || |||| | ||||||||| || || | ||||||| ||||||||| ||||| ||||||||||||||    
T  30371416 tatatggtctttattataaatcacatacattatttaataaatgaatctaaaatgttaatttttacttataataatga 30371340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 884935 - 884986
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||| | |||||||| ||||||||||||||| ||||||||||| ||||||    
T  884935 tatatgatttataatatggaccacatacatcatttattgaatgaacttaaaa 884986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 6279471 - 6279518
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||||| |||||||||||| || |||||||||||| |||||    
T  6279471 tggtctataatatggaccacatacataatttattgaatgaatataaaa 6279518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 18652836 - 18652883
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||| |||||||||||||| || ||||||||| |||||||||||||||    
T  18652836 tataaaccacatacatcatttaatgaatgaatctaaaatgttgatttt 18652883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 71316 - 71407
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaa---aatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||| ||| || ||||||||||||||| ||| || ||||||||| |||   ||||||||||||  ||||||||| ||||| ||||||||||    
T  71316 tatatgatctttattatagaccacataca-catttaatgaatgaatctaataaaatgttgatttttgcttataatagtgatcggagggtgtat 71407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 7505167 - 7505229
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||| |||||||||||| || |||||||||  ||||||||||||||   ||||||||||||    
T  7505167 tatagatcacatacatcatttaatgaatgaatccaaaatgttgatttttgtttataataatga 7505229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14772629 - 14772542
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||| |||| || |||||||||||  |||||| || ||||||||  |||||||||||||||  ||||||||| ||| | ||||||||||    
T  14772629 tatatagtctttattatagaccaca--catcatttaatgaatgaacctaaaatgttgatttttgcttataatagtgaccggagggtgtat 14772542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 17967378 - 17967424
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaat 53  Q
    ||||||| || |||||||||||||||| |||||||||||| ||||||    
T  17967378 gtctatattaaagaccacatacatcatttattgaatgaatataaaat 17967424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 5984044 - 5984093
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatg 54  Q
    |||||||||||| |||||| |||||||||  ||||||||||| |||||||    
T  5984044 tggtctataataaagaccatatacatcattaattgaatgaatctaaaatg 5984093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 11773533 - 11773488
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||| |||||||||||||||||| ||  |||||||||||||||||    
T  11773533 gtctaaaatatagaccacatacataattaattgaatgaatttaaaa 11773488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 12922439 - 12922480
Alignment:
Q  11 ataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||    
T  12922439 ataatatagaccaaatatatcatttattgaatgaatttaaaa 12922480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 14274208 - 14274163
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    |||||||| |||||||||||||||  | ||||||||||||||||||    
T  14274208 tataatatggaccacatacatcattaaatgaatgaatttaaaatgt 14274163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 25408606 - 25408651
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||| |||| |||||||||||||||| |||||||||||| |||||    
T  25408606 gtctacaataaagaccacatacatcatttattgaatgaatctaaaa 25408651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 25941724 - 25941667
Alignment:
Q  20 accacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||||||| || | ||| ||||||| |||||||||||  |||||||||||||    
T  25941724 accacatacatcatttaataaataaatttaatatgttgatttttgcttataataatga 25941667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 30489163 - 30489204
Alignment:
Q  11 ataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||||||||| |||||  |||||||||||||||||    
T  30489163 ataatatagaccacatatatcattaattgaatgaatttaaaa 30489204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 30780133 - 30780178
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||| |||| ||||| |||||||||| ||||||||||||||||||    
T  30780133 gtctacaataaagaccgcatacatcatttattgaatgaatttaaaa 30780178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 1023711 - 1023751
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||||||| ||||||||||||||||||| |||| ||||||    
T  1023711 tggtctatattatagaccacatacatcatttattcaatgaa 1023751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 1100126 - 1100086
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    ||||||||||||||||||| || ||||||||| ||||||||    
T  1100126 tatagaccacatacatcatttaatgaatgaatctaaaatgt 1100086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 2673924 - 2673888
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatg 43  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  2673924 gtctatattatagaccacatacatcatttattgaatg 2673888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 4739623 - 4739675
Alignment:
Q  11 ataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttg 63  Q
    ||||||||||||| |||||| || |||||||| |||||||||  |||||||||    
T  4739623 ataatatagaccaaatacattatttattgaattaatttaaaaatttgattttg 4739675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 7313909 - 7313830
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagaggg 85  Q
    ||||||||| ||||||| ||||| ||||| |||||||||||||||||| ||  | ||| |||||||| | ||| |||||||    
T  7313909 tggtctata-tatagactacatatatcatttattgaatgaatttaaaaagtgaacttttacttataaaagtgaccagaggg 7313830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 15966035 - 15965995
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    |||| ||||||||||||||||||||||||  ||||||||||    
T  15966035 tggtttataatatagaccacatacatcattaattgaatgaa 15965995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18254772 - 18254696
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||||||||| ||| |||||||||||| || |  || | |||||| | || ||||| ||||||||||||||    
T  18254772 tatatggtctataataaagatcacatacatcatttaatagataactttaaattattaattttaacttataataatga 18254696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18942043 - 18942087
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||||||  |||||||||||||||||||||||  ||||||||||    
T  18942043 tatatggttcataatatagaccacatacatcattaattgaatgaa 18942087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22650939 - 22650887
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaat 53  Q
    |||||||||| || ||||||||||||||||||| || | ||||||| ||||||    
T  22650939 tatatggtctttattatagaccacatacatcatttaataaatgaatctaaaat 22650887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 28518793 - 28518849
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataa 71  Q
    ||||||||||||||||||| || ||||| ||| |||||| ||||||||  |||||||    
T  28518793 tatagaccacatacatcatttaatgaatcaatctaaaattttgatttttgcttataa 28518849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 31911335 - 31911375
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatt 47  Q
    ||||||| |||||| |||||||||||| |||||||||||||    
T  31911335 gtctatattatagatcacatacatcatttattgaatgaatt 31911375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 40100157 - 40100081
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||| ||||||| |||| ||||||||||||| ||  |||||  ||||||||| ||| | ||||| ||||    
T  40100157 atatagaccacacacatcatttattaaatgaatttaaaaagtcaatttttgcttataatagtgaacggagggagtat 40100081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 40355230 - 40355190
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    |||||||||||||||||| ||| |||||| |||||||||||    
T  40355230 tggtctataatatagaccgcatgcatcatttattgaatgaa 40355190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 42247627 - 42247591
Alignment:
Q  9 ctataatatagaccacatacatcatgtattgaatgaa 45  Q
    |||||||||||||||| |||||||| |||||||||||    
T  42247627 ctataatatagaccacgtacatcatttattgaatgaa 42247591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 29241548 - 29241613
Alignment:
Q  12 taatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||||| ||||||||| |||||||||||| ||||| |||||||||| |||||||||||||    
T  29241548 taatatagaccaaatacatcatttattgaatgaatctaaaaagttgattttggcttataataatga 29241613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 37897739 - 37897823
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagaggg 85  Q
    |||||| ||| || |||||||||||||||| || || |||||||||||||||||||||||||  ||||||||| ||| |||||||    
T  37897739 tatatgatctttattatagaccacatacataatttaatgaatgaatttaaaatgttgatttttgcttataatagtgaccagaggg 37897823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 40639866 - 40639930
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||  ||||||||| |||||    
T  40639866 tatagaccacatacatcatttaatgaataaatttaaaatgttgatttttgcttataatagtgatc 40639930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 52215937 - 52216025
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||| ||| || ||||||||||||||||||| || ||| ||||| |||||||||||||||  ||||||||| ||| | |||||||||    
T  52215937 tatatgatctttattatagaccacatacatcatttaatgagtgaatctaaaatgttgatttttgcttataatagtgaccggagggtgta 52216025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 30519669 - 30519743
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||| |||||||||||| || ||||||||| |||||||||| ||||  ||||||||| ||| |||||||||||    
T  30519669 tatagatcacatacatcatttaatgaatgaatctaaaatgttggtttttgcttataatagtgaccagagggtgta 30519743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 40639781 - 40639851
Alignment:
Q  16 atagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggt 86  Q
    |||||||||||||||||| || ||||||||||||||||||| |||||  ||||||||| ||| | ||||||    
T  40639781 atagaccacatacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgaccggagggt 40639851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10872755 - 10872666
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||| || |||| | |||||||||||| || |||||||||||||||| ||||||||  ||||||||| |||   ||||||||||    
T  10872755 tatatggtctttattataaatcacatacatcatttaatgaatgaatttaaaatattgatttttgcttataatagtgactggagggtgtat 10872666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 35511843 - 35511904
Alignment:
Q  16 atagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    ||||||||||||||| ||  | ||||||||| ||||||||||||||| ||||||||||||||    
T  35511843 atagaccacatacataattcaatgaatgaatctaaaatgttgatttttacttataataatga 35511904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12744958 - 12745030
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||| || ||||||||||||||||||| || |||||| || ||||||||| |||||  |||||||||    
T  12744958 tatatggtctttattatagaccacatacatcatttaatgaatgtatctaaaatgttaatttttgcttataata 12745030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 54595873 - 54595801
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||| |||| || ||| ||||||||||||||| || ||||||||| |||||||||||||||  |||||||||    
T  54595873 tatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 54595801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 331859 - 331946
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    |||||||||||| |||  | ||||||||| || ||||||||| ||||||||| |||||  ||||||||| ||| | ||||||||||||    
T  331859 tggtctataataaagattatatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgtatat 331946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 1086589 - 1086535
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttga 58  Q
    ||||||||| ||||| |||||||||||||| ||||||||||| |||||| |||||    
T  1086589 atggtctattatatataccacatacatcatttattgaatgaacttaaaaagttga 1086535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 41254000 - 41253922
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    |||| |||||||||||||| || ||||||||| |||||||||||||||   |||||||| ||| | || ||||||||||    
T  41254000 tataaaccacatacatcatttaatgaatgaatataaaatgttgatttttgattataatagtgaccggatggtgtatata 41253922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 41254010 - 41254076
Alignment:
Q  23 acatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||||||||| || | |||| || |||||||||||||||  ||||||||||||||| |||||||||    
T  41254010 acatacatcatttaataaatgtatctaaaatgttgatttttgcttataataatgatcggagggtgta 41254076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19810947 - 19811000
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatg 54  Q
    |||||||||| || |||| |||||||||||||| || |||||||||||||||||    
T  19810947 tatatggtctttattataaaccacatacatcatttaatgaatgaatttaaaatg 19811000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 22497019 - 22496942
Alignment:
Q  16 atagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    |||||||||||||||||| || ||||||||| |||||| || |||||  ||||||||| |||   |||||||||||||    
T  22497019 atagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgactggagggtgtatata 22496942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 41743647 - 41743736
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||||||| |||||| |||||||||  | |||||||||  |||||||  | ||| |||||||||| ||| |||| |||||||    
T  41743647 tatatggtctataataaagaccatatacatcattaactgaatgaatccaaaatgtaaacttttacttataatagtgaccagaaggtgtat 41743736  T

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Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 45736756 - 45736679
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    ||||||||||||||||||| || ||||||||| |||| | | ||||||  ||||||||| ||| | ||||||||||||    
T  45736756 tatagaccacatacatcatttaatgaatgaatctaaactatcgatttttgcttataatagtgaccggagggtgtatat 45736679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 8256901 - 8256969
Alignment:
Q  21 ccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||| |||||| |||||||||||||||||| ||  ||||| | |||||||| ||||| |||||||||    
T  8256901 ccacatgcatcatttattgaatgaatttaaaaagtgaatttttatttataatactgatcggagggtgta 8256969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 37897761 - 37897677
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||||| ||| || |||||||||  ||||||||||| |||||| | ||||||  ||||||||||| | | |||||||||    
T  37897761 tggtctataataaagatcatatacatcattaattgaatgaatctaaaatttagatttttgcttataataattaccggagggtgta 37897677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42681263 - 42681191
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||| | |||||| | ||||||||| ||||| |||| ||||||||||||||||  ||||| ||||||||||    
T  42681263 tatatgatttataatgttgaccacatatatcatttattaaatgaatttaaaatgtaaatttttacttataata 42681191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 12047314 - 12047239
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||||||||||  | |||||||| |||||||||   |||| ||||||| || ||||| ||||||||||    
T  12047314 tatagaccacatacatcattaaatgaatgaacttaaaatgtaattttttacttatattagtgatcggagggtgtat 12047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12109890 - 12109981
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttga-ttttgacttataataatgatcagagggtgtata 91  Q
    |||||| ||| || ||||||||||||||||||  || ||||||||  ||||||||||| ||||  |||| |||||||||| |||| ||||||    
T  12109890 tatatgatctttattatagaccacatacatcaattaatgaatgaaactaaaatgttgatttttttcttaaaataatgatcggaggatgtata 12109981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 20625308 - 20625261
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||| |||||||||||||| || | |||||||||||||||||||||||    
T  20625308 tataaaccacatacatcatttaataaatgaatttaaaatgttgatttt 20625261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 22528913 - 22528960
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||| ||||||||||||||  ||||||||||| |||||    
T  22528913 tggtctataatataaaccacatacatcattgattgaatgaatctaaaa 22528960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 24596953 - 24596898
Alignment:
Q  22 cacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||| | |||||||||||| ||||||||  ||||| ||||||||||||||    
T  24596953 cacatacatcgtttattgaatgaatctaaaatgtaaatttttacttataataatga 24596898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 27102168 - 27102215
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||| ||||||||| || |||||||||||| |||||    
T  27102168 tggtctataatatagaacacatacattatttattgaatgaatctaaaa 27102215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27707235 - 27707286
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||| ||||| |||| |||||||||||||||| |||||||||||| |||||    
T  27707235 tatattgtctacaataaagaccacatacatcatttattgaatgaatctaaaa 27707286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 39836935 - 39837002
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcag 81  Q
    |||||||||||||||||||| |||||||||||| ||||| ||  | ||| | |||||||| |||||||    
T  39836935 atatagaccacatacatcatttattgaatgaatctaaaaagtaaacttttatttataatagtgatcag 39837002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 52866486 - 52866439
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||||||||||||||||| || ||||||||| ||||||||| |||||    
T  52866486 tatagaccacatacatcatttaatgaatgaatctaaaatgttaatttt 52866439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 2128431 - 2128469
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  2128431 atatagaccacatacatcatttattgaatgaatctaaaa 2128469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 4821473 - 4821527
Alignment:
Q  36 attgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| ||||||||||||  |||||  ||||||||||||| ||||||||||||    
T  4821473 attgaataaatttaaaatgtaaattttcgcttataataatgagcagagggtgtat 4821527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 4980336 - 4980382
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaat 53  Q
    |||||||||| |||| ||||||||||| |||||||||||| ||||||    
T  4980336 gtctataataaagactacatacatcatttattgaatgaatctaaaat 4980382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 10872738 - 10872820
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    ||||||| |||||| |||||||||  ||||||||||| |||||| |  |||||  ||||||||| ||| | ||||||||||||    
T  10872738 tataataaagaccatatacatcattaattgaatgaatctaaaatataaatttttgcttataatagtgaccggagggtgtatat 10872820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 12744980 - 12744930
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    |||||||||||| |||||| |||||||||  ||||||||||| ||||||||    
T  12744980 tggtctataataaagaccatatacatcattaattgaatgaatctaaaatgt 12744930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 18409299 - 18409249
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    ||||||| ||||| ||| |||||| |||| |||||||||||||||||||||    
T  18409299 tggtctaaaatatggactacatacctcatttattgaatgaatttaaaatgt 18409249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 21970579 - 21970510
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataat 75  Q
    ||||||||| |||| || ||||||||||| |||||||||||| ||||||||  | ||| ||||||||||||    
T  21970579 tggtctata-tatatactacatacatcatttattgaatgaatataaaatgtaaacttttacttataataat 21970510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 21993015 - 21992946
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataat 75  Q
    ||||||||| |||| || ||||||||||| |||||||||||| ||||||||  | ||| ||||||||||||    
T  21993015 tggtctata-tatatactacatacatcatttattgaatgaatataaaatgtaaacttttacttataataat 21992946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22152797 - 22152724
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataat 75  Q
    |||||| |||||| |||| || ||||||||||| |||||||||||| |||||| |  ||||| ||||||||||||    
T  22152797 tatatgatctata-tatatactacatacatcatttattgaatgaatataaaatttgaatttttacttataataat 22152724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 26367543 - 26367593
Alignment:
Q  12 taatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||| |||||||||||||||| |||||||||||| |||||  ||||||||    
T  26367543 taataaagaccacatacatcatttattgaatgaatctaaaacattgatttt 26367593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 27224649 - 27224575
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||| |||||||||||| || ||||| ||| |||||||||||||||   |||||||| ||| | |||||||||    
T  27224649 tatagatcacatacatcatttaatgaataaatctaaaatgttgatttttgtttataatagtgaccggagggtgta 27224575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 24075513 - 24075574
Alignment:
Q  12 taatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||| ||| || |||||||||| ||||||||||| |||||||| ||||||  |||||||||    
T  24075513 taataaagagcatatacatcatgaattgaatgaatctaaaatgtagatttttgcttataata 24075574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 26121618 - 26121569
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatg 54  Q
    |||||||||||| |||||| |||||||||  ||||||||||| |||||||    
T  26121618 tggtctataataaagaccatatacatcattaattgaatgaatctaaaatg 26121569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26121596 - 26121649
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatg 54  Q
    |||||||||| || ||||||||||||||||||| || ||||| ||| |||||||    
T  26121596 tatatggtctttattatagaccacatacatcatttaatgaataaatctaaaatg 26121649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26244437 - 26244490
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatg 54  Q
    |||||||||| || ||||||||||||||||||| || ||||| ||| |||||||    
T  26244437 tatatggtctttattatagaccacatacatcatttaatgaataaatctaaaatg 26244490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37807593 - 37807532
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||||||| || |||| ||||||||||||||  | ||||| ||||||||||||| |||||    
T  37807593 tatatggtctttattataaaccacatacatcattcaatgaataaatttaaaatgttaatttt 37807532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 50603590 - 50603557
Alignment:
Q  19 gaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||||||| ||||||||||||||||||    
T  50603590 gaccacatacatcatttattgaatgaatttaaaa 50603557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3648756 - 3648844
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||| |||||||||| |||| | |||||||||  ||||||||||| |||||| |  | |||  ||||||||| |||||||||| ||||    
T  3648756 tatattgtctataataaagactatatacatcattgattgaatgaatgtaaaatataaagttttgcttataatagtgatcagaggatgta 3648844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 8150002 - 8150050
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||| |||||||| ||| | |||||||| |||||||||||||||||||    
T  8150002 atataaaccacatatatcgtttattgaataaatttaaaatgttgatttt 8150050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 24075514 - 24075458
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||||||||| ||||| || ||||||||| |||||||||| ||||  |||||||||    
T  24075514 tagaccacataaatcatttaatgaatgaatctaaaatgttgttttttgcttataata 24075458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 34327589 - 34327649
Alignment:
Q  25 atacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagaggg 85  Q
    ||||||||| || ||||||||| ||||||||| |||||   |||||||||||||| |||||    
T  34327589 atacatcatttaatgaatgaatctaaaatgttaatttttgtttataataatgatcggaggg 34327649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 39009906 - 39009874
Alignment:
Q  13 aatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||||||||||||||||||| |||||||||||    
T  39009906 aatatagaccacatacatcatttattgaatgaa 39009874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 39289641 - 39289593
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||| |||||||| |||||||||||||||  |||||||||| ||||||    
T  39289641 atggtttataatatggaccacatacatcattaattgaatgaacttaaaa 39289593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 12274888 - 12274804
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||||||| ||||| ||||||||||||| |||||||||||  |||||||| ||||||  ||||||||| ||| |||||||||||    
T  12274888 tggtctatattataggccacatacatcatttattgaatgaacataaaatgtggatttttgcttataatagtgaccagagggtgta 12274804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 25245216 - 25245290
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtata 91  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||  ||||||||| ||| | |||||||||||    
T  25245216 tagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgtata 25245290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10095802 - 10095714
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||| ||  |||||||||||||||||| || ||||||||| ||||||||| |||||  ||||||||| ||| | |||||||||    
T  10095802 tatatggtctttatcatagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgta 10095714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 18819999 - 18820066
Alignment:
Q  12 taatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||| | ||| |||| |||||||||||    
T  18819999 taatatagacaacatacatcatttattgaatgaatctaaaatgttaaattttacttgtaataatgatc 18820066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 2943279 - 2943202
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatataa 94  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||  ||||||||| ||| |  |||||||| ||||    
T  2943279 tagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccgaagggtgtaaataa 2943202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 21586875 - 21586943
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||||| ||| || |||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  21586875 tggtctataataaagatcatatacatcattaattgaatgaatctaaaatattgatttttacttataata 21586943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 43813188 - 43813243
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||||||||| ||||||||||||||| |||||||||||| ||| | |||||||||    
T  43813188 gtctataatattgaccacatacatcatttattgaatgaatctaagaagttgatttt 43813243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 6455609 - 6455695
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| || |||||||||||||||||||  | ||||||||  |||||||| ||||||  |||||| || ||||| ||||||||||    
T  6455609 atggtctttattatagaccacatacatcattaaatgaatgaacctaaaatgtagatttttgcttatattagtgatcggagggtgtat 6455695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 6803444 - 6803521
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    ||||||||| |||||||||  |||||||||||||||||| ||||||||   |||||||| ||||  ||| ||||||||    
T  6803444 tatagaccatatacatcatcaattgaatgaatttaaaatattgatttttgtttataatagtgattggagtgtgtatat 6803521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 7295117 - 7295202
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||| || |||| | |||||||||||| || | ||||||| ||||||||| |||||   |||||||||||||| ||||||||||    
T  7295117 tggtctttattatatatcacatacatcatttaataaatgaatgtaaaatgttaatttttgtttataataatgatcggagggtgtat 7295202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 12274874 - 12274955
Alignment:
Q  9 ctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||||||||||||| || |||||||||||| ||||| ||  |||||  ||||||||| | | | ||||||||||    
T  12274874 ctataatatagaccacatacattatatattgaatgaatctaaaaagtacatttttgcttataatagttaccggagggtgtat 12274955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 24934631 - 24934562
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||| | |||| |||||||||||||| |||||||||||  ||||||||  ||||||| ||||||||    
T  24934631 atggtctacattataaaccacatacatcatttattgaatgaacctaaaatgtaaattttgatttataata 24934562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 7104744 - 7104792
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaat 53  Q
    |||||| |||||||||||||||||||||| |||| |||||| |||||||    
T  7104744 tggtctttaatatagaccacatacatcatttattaaatgaacttaaaat 7104792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 24280902 - 24280950
Alignment:
Q  25 atacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||  |||||||||||||||||||| |||||| ||||||||||    
T  24280902 atacatcattaattgaatgaatttaaaatgtagatttttacttataata 24280950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 5977892 - 5977939
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||  |||||||||||||||| |||||||| |||||||||    
T  5977892 tggtctataatgaagaccacatacatcatttattgaattaatttaaaa 5977939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 7104715 - 7104644
Alignment:
Q  18 agaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||||||| |||||||||||||  ||||||||  |||||  ||||||| | ||| |||||||||||    
T  7104715 agaccacatacatcttgtattgaatgaacctaaaatgtcaatttttgcttataacagtgaccagagggtgta 7104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 14995942 - 14995887
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||| |||| |||||||||| ||||| ||||||||||||||||||  ||||||||    
T  14995942 gtctacaataaagaccacatatatcatttattgaatgaatttaaaacattgatttt 14995887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 31319577 - 31319664
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    |||||| || ||||||| ||||||||||| | |||||||||| |||||  |  |||||  ||||||||| ||||| ||||||||||||    
T  31319577 tggtctttattatagactacatacatcattttttgaatgaatctaaaaaatatatttttccttataatagtgatcggagggtgtatat 31319664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 38940290 - 38940227
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    ||||||||||||| ||| || |||||||||||| ||||||||  |||||  |||||||||||||    
T  38940290 atatagaccacattcattatttattgaatgaatctaaaatgtcaatttttgcttataataatga 38940227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 39970218 - 39970265
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||| |||| |||||||||||||||||||  |||||||||||||||||    
T  39970218 tggtttatattatagaccacatacatcattgattgaatgaatttaaaa 39970265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 23797411 - 23797493
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||| |||||| |||||||||  ||||||||||| |||||||   | ||| |||||||||| ||| | |||||||||    
T  23797411 gtctataataaagaccagatacatcattaattgaatgaatctaaaatgcaaaattttacttataatagtgaccggagggtgta 23797493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 26385704 - 26385654
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    |||||| || |||||||||||||||| || |||||||||||| ||||||||    
T  26385704 tggtctttattatagaccacatacataatttattgaatgaatctaaaatgt 26385654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 28752158 - 28752088
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataat 75  Q
    ||||| ||||||||||||| ||||||||| || |||||||| |||||| ||| | |||  |||||||||||    
T  28752158 tggtcaataatatagaccaaatacatcatttaatgaatgaaattaaaaagttaacttttgcttataataat 28752088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30138871 - 30138801
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataa 71  Q
    ||||| |||| || ||||||||||| ||||||| || |||||||||  ||||||||||||||  |||||||    
T  30138871 tatatagtctttattatagaccacacacatcatttaatgaatgaatccaaaatgttgatttttgcttataa 30138801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 30138849 - 30138915
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataa 71  Q
    |||||||||||| |||| | |||||||||  ||||||||||| ||||||||  ||||| ||||||||    
T  30138849 tggtctataataaagactatatacatcattaattgaatgaatctaaaatgtaaatttttacttataa 30138915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 31115680 - 31115738
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||||||||| || || ||||||||  |||||||||||||||  |||||||||    
T  31115680 tatagaccacatacataatttaatgaatgaagctaaaatgttgatttttgcttataata 31115738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 43103132 - 43103066
Alignment:
Q  24 catacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||| || | ||||||||||||||||| |||||  ||||||||| ||| | ||||||||||    
T  43103132 catacatcatttaataaatgaatttaaaatgttaatttttgcttataatagtgaccggagggtgtat 43103066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 47535038 - 47535120
Alignment:
Q  12 taatatagaccacatacatcatgtattgaatgaatttaaaatgtt-gattttgacttataataatgatcagagggtgtatata 93  Q
    |||||| ||||||||||||||| |||||||||||| ||||| |||   ||||  ||||||||| ||||| ||||| |||||||    
T  47535038 taatatggaccacatacatcatttattgaatgaatctaaaaggttatttttttgcttataatagtgatcggagggagtatata 47535120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 3106014 - 3106047
Alignment:
Q  12 taatatagaccacatacatcatgtattgaatgaa 45  Q
    |||||||||||||||||||||| |||||||||||    
T  3106014 taatatagaccacatacatcatttattgaatgaa 3106047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 4406159 - 4406070
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    ||||||| || |||||||||||||||||||  | ||||||||  |||||||| | ||||  |||||| || ||| | |||||||||||||    
T  4406159 atggtctttattatagaccacatacatcattaaatgaatgaacctaaaatgtagtttttttcttatattagtgaccggagggtgtatata 4406070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 6455628 - 6455543
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||| ||||||  | ||||||  | ||||||||| ||||||||  |||||  ||||||||| ||||| ||||||||||    
T  6455628 tggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtaaatttttgcttataatagtgatcggagggtgtat 6455543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 10595554 - 10595599
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||  |||||||||||||| || |||||||||||||||    
T  10595554 gtctataatatgaaccacatacatcatttaatgaatgaatttaaaa 10595599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 27242477 - 27242522
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||| ||||||||| |||||| |||||||||||| |||||    
T  27242477 gtctataataaagaccacatgcatcatttattgaatgaatctaaaa 27242522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 28229103 - 28229148
Alignment:
Q  29 atcatgtattgaatgaatttaaaatgttgattttgacttataataa 74  Q
    ||||| |||||||||||||||||||||  |||||| ||||||||||    
T  28229103 atcatttattgaatgaatttaaaatgtcaattttggcttataataa 28229148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 30457800 - 30457865
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||| ||||||| ||| |||||||||||||||||| ||  | ||| |||||||||| |||||    
T  30457800 atatagacaacatacaacatttattgaatgaatttaaaaagtgaacttttacttataatagtgatc 30457865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37101778 - 37101725
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatg 54  Q
    |||||||||| || |||| |||||||||||||| || ||||||||| |||||||    
T  37101778 tatatggtctttattataaaccacatacatcatttaatgaatgaatctaaaatg 37101725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 46578338 - 46578297
Alignment:
Q  11 ataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||| ||||||||||||||  |||||||||||||||||    
T  46578338 ataatataaaccacatacatcattaattgaatgaatttaaaa 46578297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 785609 - 785681
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||| |||||| ||||| ||||| ||||| |||||||||||  ||||||||  |||||  |||||||||    
T  785609 tatatggtttataatgtagactacatatatcatttattgaatgaacgtaaaatgtgaatttttccttataata 785681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 3882882 - 3882930
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttg 63  Q
    |||||||||||||||| ||  | ||||||||| ||||||||||||||||    
T  3882882 tatagaccacatacataattcaatgaatgaatctaaaatgttgattttg 3882930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 5691547 - 5691587
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    |||| ||||||||||||||  ||||||||||||||||||||    
T  5691547 tataaaccacatacatcattaattgaatgaatttaaaatgt 5691587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 8169158 - 8169225
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||||||| ||||||| ||||||||||| |||||||||||| ||||| ||| | |||  |||||||||    
T  8169158 tggtctata-tatagactacatacatcatttattgaatgaatctaaaaagttaacttttgcttataata 8169225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 19197772 - 19197812
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  19197772 tggtctataatatagaccacatacatcgttaattgaatgaa 19197812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 23818483 - 23818435
Alignment:
Q  25 atacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||||||| || ||||||||| |||||||||||||||  |||||||||    
T  23818483 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 23818435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 24934612 - 24934696
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||| |||||| |||||||  ||||| || |||||||||||  |||||||| ||||||   |||||| ||||||||||| |||||    
T  24934612 tggtttataatgtagaccatgtacattatttattgaatgaacataaaatgtggatttttgtttataacaatgatcagagagtgta 24934696  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 27163244 - 27163204
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    |||| |||||||||||||||||||||||| |||| ||||||    
T  27163244 tggtttataatatagaccacatacatcatttattcaatgaa 27163204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 29498857 - 29498781
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggt 86  Q
    ||||||| ||||||||||||||||  |||||||  || |||||||| ||||||  |||||| || ||||| ||||||    
T  29498857 tataataaagaccacatacatcattaattgaatatatctaaaatgtggatttttgcttatattattgatcggagggt 29498781  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 32549893 - 32549849
Alignment:
Q  12 taatatagaccacatacatcatgtattgaatgaatttaaaatgtt 56  Q
    |||||||||||||||||||||| |||| ||||||  |||||||||    
T  32549893 taatatagaccacatacatcatttattaaatgaacataaaatgtt 32549849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 32549882 - 32549930
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaat 53  Q
    ||||||||| || ||| |||||||||||| |||||||||||| ||||||    
T  32549882 tggtctatattaaagatcacatacatcatttattgaatgaatctaaaat 32549930  T

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Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 37066261 - 37066221
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||| |||||||||||||||||||||||  ||||||||||    
T  37066261 tggtccataatatagaccacatacatcattaattgaatgaa 37066221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 38940281 - 38940348
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||||||| ||||||| ||||||||||| |||| ||||||||||||| ||  ||||| | ||||||||    
T  38940281 tggtctata-tatagactacatacatcatttattaaatgaatttaaaaagtgaatttttaattataata 38940348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 39970236 - 39970196
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    |||||||||||||| ||||||||||||||  ||||||||||    
T  39970236 tggtctataatataaaccacatacatcattgattgaatgaa 39970196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 40211228 - 40211184
Alignment:
Q  8 tctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||| ||||||||||||||  ||||||||||| |||||    
T  40211228 tctataatataaaccacatacatcattgattgaatgaatctaaaa 40211184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 34170158 - 34170100
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||||||||||||||| |||||||||||| || ||||||||| |||||||||||||||    
T  34170158 atggtctataatatagatcacatacatcatttaatgaatgaatctaaaatgttgatttt 34170100  T

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Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 29419864 - 29419921
Alignment:
Q  21 ccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgat 78  Q
    ||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||    
T  29419864 ccacatacatcatttaatgaatgaatctaaaatgttgatttttacttataataatgat 29419921  T

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Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15517147 - 15517223
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    ||||| |||| || ||||||||||||||||||| || ||||||||| |||||| ||||||||  |||||||||||||    
T  15517147 tatatcgtctttattatagaccacatacatcatttaatgaatgaatctaaaatattgatttttgcttataataatga 15517223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 15718463 - 15718539
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||| |||||||||||||| |||||||||||||| ||| ||  |||||  ||||||||| ||||||||||||||||    
T  15718463 atatacaccacatacatcatttattgaatgaattttaaaagtgaatttttgcttataatagtgatcagagggtgtat 15718539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 10258364 - 10258450
Alignment:
Q  4 atggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||||  ||||| |||||||||  ||||||||||| ||||| |||  |||| |||||||||||||||| |||| |||||    
T  10258364 atggtctataataatgaccatatacatcattaattgaatgaatctaaaaagttattttttacttataataatgatcggaggatgtat 10258450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 32254884 - 32254966
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||| |||||||||||||||| || ||||||||| |||||| || | |||  ||||||||| ||||| |||||||||    
T  32254884 gtctataataaagaccacatacatcatttaatgaatgaatctaaaatattaacttttgcttataatagtgatcggagggtgta 32254966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34379792 - 34379864
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||| |||| || ||| ||||||||||||||| || ||||||||| |||||||||||||||  |||||||||    
T  34379792 tatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 34379864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 6033027 - 6033114
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatat 92  Q
    |||||| |||||||||| ||||||||||| ||||| |||||  |||||| || |  ||  ||||||||||||| ||||||||||||||    
T  6033027 tggtctttaatatagactacatacatcatttattggatgaacctaaaatattaaaatttgcttataataatgaacagagggtgtatat 6033114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 26527269 - 26527184
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||| ||||||| |||| |||||||| || |  |||||| || |||||||||||||||  ||||||||| ||||| ||||||||||    
T  26527269 tggtttataataaagactacatacattattttatgaatgtatctaaaatgttgatttttgcttataatagtgatcggagggtgtat 26527184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7158339 - 7158251
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||| ||||| |||| |||||||||||||||| |||||||| ||| |||||  | ||||||  |||||| |  |||||||||||||||    
T  7158339 tatattgtctacaataaagaccacatacatcatttattgaataaatctaaaacatagatttttgcttatatttgtgatcagagggtgta 7158251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 8449644 - 8449568
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||||||||||| |||||||| |||  ||||| || |||||  ||||||||| ||||| || |||||||    
T  8449644 atatagaccacatacatcatttattgaataaatccaaaatattaatttttgcttataatagtgatcggatggtgtat 8449568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 8458448 - 8458372
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||||||||||| |||||||| |||  ||||| || |||||  ||||||||| ||||| || |||||||    
T  8458448 atatagaccacatacatcatttattgaataaatccaaaatattaatttttgcttataatagtgatcggatggtgtat 8458372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12104828 - 12104756
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||| |||| || |||| | |||||||||||| || | |||||||||||||||||||||||  |||||||||    
T  12104828 tatatagtctttattataaatcacatacatcatttaataaatgaatttaaaatgttgatttttgcttataata 12104756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 16121044 - 16120976
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||| |||||||||||||  |||||||| |||||||||||||||||| | | | ||| ||||||||||    
T  16121044 tggtcaataatatagaccaagtacatcatttattgaatgaatttaaaaagataacttttacttataata 16120976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28555004 - 28555092
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||||||||| ||||||  | ||||||  | | ||||||| |||||||| ||||||  ||||||||| ||| |||||||||||    
T  28555004 tatatggtctataataaagaccatgtgcatcattaaataaatgaatctaaaatgtagatttttgcttataatagtgaccagagggtgta 28555092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 14173453 - 14173492
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaat 46  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  14173453 gtctataatattgaccacatacatcatttattgaatgaat 14173492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 14177989 - 14178028
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaat 46  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  14177989 gtctataatattgaccacatacatcatttattgaatgaat 14178028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 6033043 - 6032961
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||||| || ||||||||||||| || |||| ||||||| |||||| |  ||||| |||||||||| ||||  |||||||||    
T  6033043 gtctatattaaagaccacatacattatttattaaatgaatctaaaatatcaatttttacttataatagtgattggagggtgta 6032961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 11637249 - 11637199
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgt 55  Q
    |||||||||||| ||| || |||||||||  ||||||||||||||||||||    
T  11637249 tggtctataataaagatcatatacatcattaattgaatgaatttaaaatgt 11637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 18886377 - 18886299
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    ||||||||||||| ||||| || ||||||||| |||||| || |||||  ||||||||| |||   |||||||||||||    
T  18886377 tatagaccacatatatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgactggagggtgtatata 18886299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 26527261 - 26527319
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||| |||||||||||||| || ||||||||| ||||||||| |||||  |||||||||    
T  26527261 tataaaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataata 26527319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3199801 - 3199740
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||| ||| || |||| |||||||||| ||| || |||||||||||||||| ||||||||    
T  3199801 tatatgatctttattataaaccacatacaacatttaatgaatgaatttaaaatattgatttt 3199740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20704106 - 20704045
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||||||| || ||||||||||||| || ||  | |||||||||||||||| ||||||||    
T  20704106 tatatggtctttattatagaccacatatattattgaatgaatgaatttaaaatattgatttt 20704045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 29072146 - 29072203
Alignment:
Q  22 cacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||||||| ||||| |||||||||||||||| |||||  ||| ||||| |||||    
T  29072146 cacatacatcatttattgtatgaatttaaaatgttaatttttgcttttaatagtgatc 29072203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 29104719 - 29104776
Alignment:
Q  22 cacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||||||| ||||| |||||||||||||||| |||||  ||| ||||| |||||    
T  29104719 cacatacatcatttattgtatgaatttaaaatgttaatttttgcttttaatagtgatc 29104776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31996556 - 31996645
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||| | || ||||||| ||||||||||| || | ||||||  |||||||||||||||  ||||||||| ||| | ||| ||||||    
T  31996556 tatatggtatttattatagactacatacatcatttaataaatgaacctaaaatgttgatttttgcttataatagtgaccggagagtgtat 31996645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 15517169 - 15517086
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||||||||| |||| | ||||||||| || ||||||||| ||||||  || ||||| ||||||||| ||| | |||||||||    
T  15517169 tggtctataataaagacgatatacatcatttaatgaatgaatctaaaattatgtttttg-cttataatagtgaccggagggtgta 15517086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 17773575 - 17773523
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||||| |||||||||||||||| ||||||||| || ||||| || ||||||    
T  17773575 tataataaagaccacatacatcatttattgaatgtatctaaaaagtggatttt 17773523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 29072130 - 29072090
Alignment:
Q  22 cacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  29072130 cacatacatcatttaataaatgaatttaaaatgttgatttt 29072090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 29104703 - 29104663
Alignment:
Q  22 cacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  29104703 cacatacatcatttaataaatgaatttaaaatgttgatttt 29104663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 48806335 - 48806261
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||| ||||||||||| |||||||||| |||||||| || |||||||||| | ||| ||||||||||||||||    
T  48806335 tggtctttaatatagaccgcatacatcatttattgaataaacttaaaatgttaaattttacttataataatgatc 48806261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 4406320 - 4406235
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||| || ||||||||||||||||||| || ||||| ||| ||||||||||||||| |||||||||| ||| | || |||||||    
T  4406320 tggtctttattatagaccacatacatcatttaatgaataaatctaaaatgttgatttttacttataatagtgaccggatggtgtat 4406235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 16578589 - 16578655
Alignment:
Q  24 catacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||| ||||||||||| ||||||||| |||||| |||||||||| ||| |||| |||||||    
T  16578589 catacatcatttattgaatgaacttaaaatgtagatttttacttataatagtgaccagaaggtgtat 16578655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 19934713 - 19934787
Alignment:
Q  19 gaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    ||||||||||||||| |||||||||||| |||||  | ||||||  ||||||||| ||||| |||||||||||||    
T  19934713 gaccacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgatcggagggtgtatata 19934787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24798184 - 24798274
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtata 91  Q
    |||||| ||| || |||||||||| |||||||| || |||||||||||||||| || |||||  ||||||||| ||| ||||| |||||||    
T  24798184 tatatgatctttattatagaccacgtacatcatttaatgaatgaatttaaaatattaatttttgcttataatagtgaccagagagtgtata 24798274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 53176369 - 53176303
Alignment:
Q  23 acatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||||||||| || ||||||||| ||||||||| ||||| |||||||||| ||||| |||||||||    
T  53176369 acatacatcatttaatgaatgaatataaaatgttaatttttacttataatagtgatcggagggtgta 53176303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32599537 - 32599618
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcaga 82  Q
    |||||||||| || |||| |||||||||||||| || | ||||||| |||||| || ||||| |||||||||| ||||||||    
T  32599537 tatatggtctttattataaaccacatacatcatttaataaatgaatctaaaatattaatttttacttataatagtgatcaga 32599618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 54164881 - 54164804
Alignment:
Q  16 atagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    |||||||||||||||||| |||||||||||| ||||| || || |||  ||||||||| ||| | |||||||||||||    
T  54164881 atagaccacatacatcatttattgaatgaatctaaaaagtggaattttgcttataatagtgaccggagggtgtatata 54164804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22493633 - 22493713
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcag 81  Q
    |||||||||| || |||||| |||||||||||| || | ||||||| |||||||||| ||||  ||||||||| |||||||    
T  22493633 tatatggtctttattatagatcacatacatcatttaataaatgaatataaaatgttgttttttgcttataatactgatcag 22493713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 2401117 - 2401042
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcaga 82  Q
    ||||||| ||| ||||| ||||||||| |||||||||||||||||| ||| | |||  ||||||||||||| ||||    
T  2401117 gtctatattattgaccaaatacatcatttattgaatgaatttaaaaagttaacttttgcttataataatgaccaga 2401042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 19934706 - 19934631
Alignment:
Q  16 atagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtata 91  Q
    |||||||||||||||||| |||||||||||| ||||| || || |||  ||||||||| ||| | |||||||||||    
T  19934706 atagaccacatacatcatttattgaatgaatctaaaaagtggaattttgcttataatagtgaccggagggtgtata 19934631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24275274 - 24275325
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||| | |||||||||||||||||||  |||||||||||||||||    
T  24275274 tatatggtctacattatagaccacatacatcattaattgaatgaatttaaaa 24275325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 39533827 - 39533902
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||| |||||||||||| || ||||| ||| |||||||||||||||  ||||||||||||| |  |||||||||    
T  39533827 tatagatcacatacatcatttaatgaataaatctaaaatgttgatttttgcttataataatgaccgtagggtgtat 39533902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 42013225 - 42013178
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||    
T  42013225 tggtttataatatagaccacatacatcattaattgaatgaatttaaaa 42013178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 12912678 - 12912604
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||| |||| ||||||||| || ||||| ||| ||||||||| ||||| ||||||||||||||||  ||||||||    
T  12912678 tatataccatatacatcatttaatgaataaatctaaaatgttaatttttacttataataatgatcgaagggtgta 12912604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 29006907 - 29006981
Alignment:
Q  16 atagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||||||||||||||| |||||||||||||||||| || || |||  ||||||||| ||| | |||| |||||    
T  29006907 atagaccacatacatcatttattgaatgaatttaaaaagtggaattttgcttataatagtgaccggaggatgtat 29006981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 33036925 - 33037010
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||||| |||||||||||||||||||  | ||||||||||||  |||||||| | |||  ||||||||| ||| | ||||||||||    
T  33036925 tggtctttaatatagaccacatacattctttattgaatgaatagaaaatgttaaattttgcttataatagtgaccggagggtgtat 33037010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36072627 - 36072680
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatg 54  Q
    |||||||||| || ||||||| ||||||||||| || |||||||||||||||||    
T  36072627 tatatggtctttattatagactacatacatcatttaatgaatgaatttaaaatg 36072680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 38382037 - 38382122
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    |||| ||||||| |||| ||||||||||| || |||||| || ||||| |||||||||  ||||||||| ||| |||| |||||||    
T  38382037 tggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgaccagatggtgtat 38382122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 2582877 - 2582813
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    ||||||| ||||||||||| || ||||| ||| |||||| ||||||||  |||||||||||||||    
T  2582877 tatagactacatacatcatttaatgaatcaatctaaaatattgatttttgcttataataatgatc 2582813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 4406302 - 4406374
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||||| ||||||||||||||||  |||||||||||  ||||| |  |||||  |||||||||||||    
T  4406302 tggtctataataaagaccacatacatcattaattgaatgaatccaaaatataaatttttgcttataataatga 4406374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 4484153 - 4484081
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    |||||||||||| |||||| |||||||||  ||||||||||| |||||||   | ||| ||||||||||||||    
T  4484153 tggtctataataaagaccatatacatcattaattgaatgaatctaaaatgcaaagttttacttataataatga 4484081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 8311328 - 8311372
Alignment:
Q  35 tattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||||||||||||||| |||||||||  |||||||||||||||    
T  8311328 tattgaatgaatttaaaaagttgatttttgcttataataatgatc 8311372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16170967 - 16171039
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||| || ||||||| ||||||||||| || | ||| ||| |||||||||||||||  |||||||||    
T  16170967 tatatggtctttattatagactacatacatcatttaattaataaatctaaaatgttgatttttccttataata 16171039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 25700521 - 25700565
Alignment:
Q  8 tctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||| ||||||||||||||||||||| |||||||||||| |||||    
T  25700521 tctacaatatagaccacatacatcatttattgaatgaatctaaaa 25700565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 39235220 - 39235148
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||| ||| || |||| |||||||||||||| || | ||||||| ||||||||||||||| || |||||||    
T  39235220 tatatgatctttattataaaccacatacatcatttaataaatgaatctaaaatgttgatttttacctataata 39235148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 47308193 - 47308105
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    |||||| || |||| |||| |||||||||  | |||||||||  ||||||||||||||  ||||||||| |||||  ||||||||||||    
T  47308193 tggtctttattataaaccatatacatcattaaatgaatgaatccaaaatgttgatttttgcttataatagtgatcgaagggtgtatata 47308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 51126184 - 51126144
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  51126184 tggtctataatatagaccacatacatcattaattgaatgaa 51126144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 52914055 - 52914127
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||| |||| || ||||||||||||||||||| || ||||||||| |||||| || |||||  |||||||||    
T  52914055 tatatagtctttattatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataata 52914127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 55936044 - 55936116
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||| |||| || ||| ||||||||||||||| || ||||||||| |||||| ||||||||  |||||||||    
T  55936044 tatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatattgatttttgcttataata 55936116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 27537130 - 27537051
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||||| ||| ||| |||||||| || ||||||||| ||||||||  |||||  ||||||||||||| |||||| ||||    
T  27537130 tataataaagatcacttacatcatttaatgaatgaatctaaaatgtaaatttttgcttataataatgaccagaggatgta 27537051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 33118277 - 33118230
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||| |||||||||||| | || |||||||||||||    
T  33118277 tggtctataatatagatcacatacatcatttgttaaatgaatttaaaa 33118230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 38949747 - 38949790
Alignment:
Q  9 ctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||    
T  38949747 ctataatatagactacatacatcatttattgaataaatttaaaa 38949790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 54164888 - 54164959
Alignment:
Q  19 gaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||||||||||| |||||||||||| |||||  | ||||||  ||||||||| ||| | ||||||||||    
T  54164888 gaccacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgaccggagggtgtat 54164959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 4370477 - 4370395
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||| |||| |||||| ||||||||| |||||||||||| |||||| | ||||||  |||||| |  ||||| |||||||||    
T  4370477 gtctacaataaagaccatatacatcatttattgaatgaatctaaaatatggatttttgcttatatttgtgatcggagggtgta 4370395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 6975004 - 6975062
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||||| |||||||||||  | |||||||||| ||||||||||||||  |||||||||    
T  6975004 tatagactacatacatcattaaatgaatgaattcaaaatgttgatttttgcttataata 6975062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 20542869 - 20542911
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||||||||||||||||  |||||||||| ||||||    
T  20542869 tataatatagaccacatacatcattaattgaatgaacttaaaa 20542911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 25022587 - 25022513
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    |||||| |||||||||||| || ||||||||| ||||||||| ||||    |||||||||||||| ||| |||||    
T  25022587 tatagatcacatacatcatttaatgaatgaatgtaaaatgttaatttgtgtttataataatgatcggagagtgta 25022513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 37255752 - 37255714
Alignment:
Q  14 atatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  37255752 atatagaccacatacatcatttattgaatgaatctaaaa 37255714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 40051053 - 40051123
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataat 75  Q
    ||||||||| || | |||||||||||||| || | |||||| |||||||||  ||||| ||||||||||||    
T  40051053 tggtctatattaaaaaccacatacatcatttactaaatgaagttaaaatgtaaatttttacttataataat 40051123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 40952417 - 40952359
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    ||||||||||||| ||||| || ||||||||| ||||||||||||| |  |||||||||    
T  40952417 tatagaccacatatatcatttaatgaatgaatctaaaatgttgattattgcttataata 40952359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 46803465 - 46803543
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    ||||| |||| || |||| ||||||||||| || || |||| |||| |||| |||||||||| ||||||||| ||||||    
T  46803465 tatatagtctttattataaaccacatacataatttaatgaaagaatctaaactgttgatttttacttataattatgatc 46803543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 47181628 - 47181570
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||| ||| |||||||||| || |||||||||||||||||| ||||||  |||||||||    
T  47181628 tataaaccgcatacatcatttaatgaatgaatttaaaatgtagatttttgcttataata 47181570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10308297 - 10308342
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaat 46  Q
    ||||| |||| || ||||||||||||||||||| ||||||||||||    
T  10308297 tatatagtctttattatagaccacatacatcatttattgaatgaat 10308342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 16667135 - 16667192
Alignment:
Q  16 atagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||||||||||||||| |||||||||||  ||||||||  | ||| ||||||||||    
T  16667135 atagaccacatacatcatttattgaatgaacgtaaaatgtcaacttttacttataata 16667192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 20215633 - 20215564
Alignment:
Q  18 agaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtg 87  Q
    |||||||||||||||| |||||||||||  ||||||||  |||||  ||||||||| ||| | |||||||    
T  20215633 agaccacatacatcatttattgaatgaacctaaaatgtcaatttttgcttataatagtgaccggagggtg 20215564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 21586983 - 21587036
Alignment:
Q  9 ctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    ||||| ||||||| ||||||||||| |||||||||||| ||||| ||| |||||    
T  21586983 ctatattatagactacatacatcatttattgaatgaatctaaaaagtttatttt 21587036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 36072647 - 36072558
Alignment:
Q  7 gtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatataata 96  Q
    |||||||||| |||||| |||||||||  ||||||||||| |||||||   | |||  ||||||||| ||| | ||||||||||| ||||    
T  36072647 gtctataataaagaccatatacatcataaattgaatgaatctaaaatgcaaaattttgcttataatagtgaccggagggtgtataaaata 36072558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 36786229 - 36786172
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||| ||||||| |||| | |||||||||  ||||||||||| |||||||||||||||    
T  36786229 tggtttataataaagactatatacatcattaattgaatgaatctaaaatgttgatttt 36786172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 38949740 - 38949683
Alignment:
Q  26 tacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagag 83  Q
    |||||||| |||||||| |||||||||| || |||||   ||||||||||||||||||    
T  38949740 tacatcatttattgaattaatttaaaatattaattttttattataataatgatcagag 38949683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 3435229 - 3435189
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||| |||||||||||||||||||| || |||||||||||    
T  3435229 tggtccataatatagaccacatacattatttattgaatgaa 3435189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8826948 - 8826896
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaat 53  Q
    |||||||||| || |||||| |||||||||||| || ||||| ||||||||||    
T  8826948 tatatggtctttattatagatcacatacatcatttaatgaataaatttaaaat 8826896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 14351334 - 14351302
Alignment:
Q  13 aatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||||||||||||||||||| |||||||||||    
T  14351334 aatatagaccacatacatcatttattgaatgaa 14351302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21003997 - 21004041
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||||||||| | |||||||||||||||||||  ||||||||||    
T  21003997 tatatggtctacattatagaccacatacatcattaattgaatgaa 21004041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 23599851 - 23599887
Alignment:
Q  16 atagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||||||||||  |||||||||||||||||    
T  23599851 atagaccacatacatcattaattgaatgaatttaaaa 23599887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 31089954 - 31089994
Alignment:
Q  12 taatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||||||||||| |||| ||||||| |||||    
T  31089954 taatatagaccacatacatcatttattcaatgaatctaaaa 31089994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 48860594 - 48860562
Alignment:
Q  20 accacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||| ||||||||||||||||||    
T  48860594 accacatacatcatttattgaatgaatttaaaa 48860562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 51126166 - 51126206
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||||||| |||||||||||||||||||  ||||||||||    
T  51126166 tggtctatattatagaccacatacatcattaattgaatgaa 51126206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 54508236 - 54508164
Alignment:
Q  17 tagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgta 89  Q
    ||||| ||||||||||| |||||||||||| |||||| |  |||||  |||||| | |||||| |||||||||    
T  54508236 tagacaacatacatcatttattgaatgaatctaaaatataaatttttgcttatatttatgatcggagggtgta 54508164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 54787061 - 54787021
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    |||||||||||||| ||||||||||||||  ||||||||||    
T  54787061 tggtctataatataaaccacatacatcattgattgaatgaa 54787021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 56364400 - 56364320
Alignment:
Q  10 tataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtat 90  Q
    ||||||| |||| ||||||||||| || |||||| || ||||| |||||||||  |||||||||  || |||| |||||||    
T  56364400 tataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagcgaccagatggtgtat 56364320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 89681 - 89603
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatc 79  Q
    |||||| ||| || |||||| |||||||||||| || |||| |||| |||||||||||||||  |||||||||||||||    
T  89681 tatatgatctttattatagatcacatacatcatttaatgaaagaatctaaaatgttgatttttgcttataataatgatc 89603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 24677 - 24755
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcagagggtgtatata 93  Q
    ||||||||||||||||||| || ||||||||| |||||| || |||||  ||||||||| ||| | |||||||| ||||    
T  24677 tatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgaccggagggtgtgtata 24755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 39180 - 39241
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatg 76  Q
    ||||||||| ||||||||| || ||||||||| |||||| ||||||||  ||||||||||||    
T  39180 tatagaccatatacatcatttaatgaatgaatctaaaattttgatttttgcttataataatg 39241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 36915 - 36985
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataat 75  Q
    ||||| |||| ||||| || ||||||||| || ||||||||| |||||||||||||||   ||||||||||    
T  36915 tggtcaataacatagatcaaatacatcatttaatgaatgaatctaaaatgttgatttttgtttataataat 36985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 146051 - 145990
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgatttt 62  Q
    |||||||||| || | ||||||||||||||||| || ||||||||| ||||||| |||||||    
T  146051 tatatggtctttattttagaccacatacatcatttaatgaatgaatctaaaatgatgatttt 145990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 40536 - 40464
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataata 73  Q
    |||||| ||| || |||||||| |||||||||| || ||||| ||| ||||||||||||||| | ||||||||    
T  40536 tatatgatctttattatagaccgcatacatcatttaatgaataaatctaaaatgttgatttttatttataata 40464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 3597 - 3550
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||| ||||||||||||||  ||||||||||| |||||    
T  3597 tggtctataatataaaccacatacatcattgattgaatgaatctaaaa 3550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 5467 - 5420
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||| ||||||||||||||||||||||||  |||||||||| ||||||    
T  5467 tggtttataatatagaccacatacatcattaattgaatgaacttaaaa 5420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 3475 - 3522
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    |||||||||||||| ||||||||||||||  ||||||||||| |||||    
T  3475 tggtctataatataaaccacatacatcattgattgaatgaatctaaaa 3522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 201 - 238
Alignment:
Q  15 tatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  201 tatagaccacatacatcatttattgaatgaatctaaaa 238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4054 - 3973
Alignment:
Q  1 tatatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttgattttgacttataataatgatcaga 82  Q
    ||||| |||| || ||||||||||||| || || || | ||||||| ||||||||||||||| | |||||||| ||| ||||    
T  4054 tatattgtctttattatagaccacatatataatttagtaaatgaatgtaaaatgttgatttttatttataatagtgaccaga 3973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 1121 - 1069
Alignment:
Q  25 atacatcatgtattgaatgaatttaaaatgttgattttgacttataataatga 77  Q
    ||||||||| || ||||| ||| ||||||||||||||| ||||||| ||||||    
T  1121 atacatcatttaatgaataaatataaaatgttgatttttacttatactaatga 1069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 11663 - 11623
Alignment:
Q  5 tggtctataatatagaccacatacatcatgtattgaatgaa 45  Q
    ||||||||||||| |||||||||||||||  ||||||||||    
T  11663 tggtctataatatggaccacatacatcattaattgaatgaa 11623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 38385 - 38425
Alignment:
Q  12 taatatagaccacatacatcatgtattgaatgaatttaaaa 52  Q
    ||||||||| ||||||||||||  |||||||||||||||||    
T  38385 taatatagatcacatacatcattaattgaatgaatttaaaa 38425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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