View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21615_high_13 (Length: 361)

Name: NF21615_high_13
Description: NF21615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21615_high_13
NF21615_high_13
[»] chr1 (36 HSPs)
chr1 (17-166)||(46998463-46998617)
chr1 (294-361)||(5540282-5540349)
chr1 (294-361)||(33143931-33143998)
chr1 (294-361)||(5539830-5539897)
chr1 (294-361)||(8678555-8678622)
chr1 (294-361)||(18984133-18984200)
chr1 (294-361)||(21856507-21856574)
chr1 (294-361)||(29306967-29307034)
chr1 (294-361)||(29307406-29307473)
chr1 (294-361)||(29870083-29870150)
chr1 (294-361)||(50970742-50970809)
chr1 (294-355)||(33144389-33144450)
chr1 (294-361)||(2733421-2733488)
chr1 (294-357)||(4636439-4636502)
chr1 (294-361)||(15646659-15646726)
chr1 (294-361)||(17433679-17433746)
chr1 (294-361)||(18984583-18984650)
chr1 (294-361)||(21856056-21856123)
chr1 (294-361)||(26859073-26859140)
chr1 (294-361)||(29869634-29869701)
chr1 (294-361)||(50970292-50970359)
chr1 (294-360)||(5962592-5962658)
chr1 (294-360)||(8679006-8679072)
chr1 (294-360)||(9018987-9019053)
chr1 (294-355)||(15646206-15646267)
chr1 (294-361)||(15173558-15173624)
chr1 (294-361)||(39154484-39154551)
chr1 (294-360)||(9019428-9019494)
chr1 (294-359)||(15173110-15173175)
chr1 (294-356)||(5963047-5963109)
chr1 (294-356)||(52268304-52268366)
chr1 (294-361)||(17433230-17433297)
chr1 (294-361)||(26859523-26859590)
chr1 (294-361)||(39154033-39154100)
chr1 (305-355)||(47827058-47827108)
chr1 (294-355)||(47826978-47827039)
[»] chr6 (30 HSPs)
chr6 (294-361)||(11445451-11445518)
chr6 (294-359)||(18504933-18504998)
chr6 (294-361)||(12935171-12935238)
chr6 (294-361)||(22219817-22219884)
chr6 (294-361)||(2319686-2319753)
chr6 (294-361)||(10899953-10900020)
chr6 (294-361)||(12935621-12935688)
chr6 (294-361)||(18257151-18257218)
chr6 (294-361)||(18257601-18257668)
chr6 (294-361)||(20741114-20741181)
chr6 (294-361)||(23074013-23074080)
chr6 (294-361)||(23075592-23075659)
chr6 (295-361)||(20741568-20741634)
chr6 (294-359)||(11277048-11277113)
chr6 (294-361)||(1149479-1149546)
chr6 (294-361)||(10900394-10900461)
chr6 (294-361)||(2322682-2322749)
chr6 (294-361)||(15828105-15828172)
chr6 (294-361)||(31470780-31470847)
chr6 (294-360)||(28472651-28472717)
chr6 (294-360)||(29859840-29859906)
chr6 (294-354)||(15827652-15827712)
chr6 (294-361)||(1149896-1149963)
chr6 (294-361)||(4811720-4811787)
chr6 (294-361)||(11445001-11445068)
chr6 (294-361)||(18505383-18505450)
chr6 (294-361)||(29033448-29033515)
chr6 (294-356)||(31470329-31470391)
chr6 (294-355)||(3835196-3835257)
chr6 (298-355)||(29035107-29035164)
[»] chr8 (25 HSPs)
chr8 (294-361)||(41681148-41681215)
chr8 (294-361)||(13225103-13225170)
chr8 (294-361)||(19176304-19176371)
chr8 (294-361)||(19176754-19176821)
chr8 (294-361)||(31133684-31133751)
chr8 (294-361)||(41681598-41681665)
chr8 (294-361)||(9928923-9928990)
chr8 (294-361)||(11656469-11656536)
chr8 (294-361)||(11656921-11656988)
chr8 (294-361)||(33328172-33328239)
chr8 (294-361)||(44831261-44831328)
chr8 (294-360)||(12571877-12571943)
chr8 (294-355)||(8074021-8074082)
chr8 (294-359)||(44831711-44831776)
chr8 (301-360)||(4629818-4629877)
chr8 (294-361)||(9178099-9178166)
chr8 (294-361)||(9930121-9930188)
chr8 (294-361)||(34541012-34541079)
chr8 (294-354)||(33742936-33742996)
chr8 (294-361)||(12572315-12572382)
chr8 (294-361)||(31133234-31133301)
chr8 (294-356)||(13224655-13224716)
chr8 (294-361)||(33328604-33328671)
chr8 (294-360)||(11336987-11337053)
chr8 (302-361)||(4630250-4630309)
[»] chr7 (25 HSPs)
chr7 (294-361)||(19590539-19590606)
chr7 (294-361)||(19590989-19591056)
chr7 (294-361)||(19830434-19830501)
chr7 (294-361)||(29099864-29099931)
chr7 (294-361)||(35289365-35289432)
chr7 (294-361)||(38859105-38859172)
chr7 (294-359)||(19830885-19830950)
chr7 (294-361)||(37786781-37786848)
chr7 (294-360)||(2659305-2659371)
chr7 (294-360)||(38858657-38858723)
chr7 (294-361)||(4641908-4641972)
chr7 (294-359)||(37787233-37787298)
chr7 (298-361)||(2658857-2658920)
chr7 (294-361)||(32004628-32004695)
chr7 (294-361)||(34534255-34534322)
chr7 (294-361)||(35288917-35288984)
chr7 (294-360)||(29100316-29100382)
chr7 (298-355)||(28584392-28584449)
chr7 (294-350)||(4478175-4478231)
chr7 (294-361)||(23953193-23953260)
chr7 (294-361)||(32005078-32005145)
chr7 (294-360)||(4641454-4641520)
chr7 (294-360)||(34533805-34533871)
chr7 (294-361)||(23952744-23952812)
chr7 (294-355)||(38160965-38161026)
[»] chr5 (33 HSPs)
chr5 (294-361)||(2865219-2865286)
chr5 (294-361)||(15372337-15372404)
chr5 (294-361)||(18183433-18183500)
chr5 (294-361)||(19359600-19359667)
chr5 (294-360)||(5818943-5819009)
chr5 (294-360)||(5819394-5819460)
chr5 (294-361)||(8647452-8647519)
chr5 (294-361)||(8647902-8647969)
chr5 (294-361)||(8461395-8461462)
chr5 (294-361)||(14215707-14215774)
chr5 (294-361)||(18182984-18183051)
chr5 (294-361)||(19359150-19359217)
chr5 (294-361)||(24331573-24331640)
chr5 (294-361)||(24362300-24362367)
chr5 (294-361)||(29455206-29455273)
chr5 (294-360)||(8460944-8461010)
chr5 (294-361)||(15708985-15709052)
chr5 (294-360)||(164205-164271)
chr5 (294-361)||(16018603-16018670)
chr5 (294-361)||(29454754-29454821)
chr5 (294-355)||(6018328-6018389)
chr5 (294-361)||(24332026-24332094)
chr5 (294-361)||(164655-164722)
chr5 (294-361)||(2864768-2864835)
chr5 (294-361)||(14215255-14215322)
chr5 (294-356)||(7349486-7349548)
chr5 (294-360)||(25000554-25000620)
chr5 (294-355)||(4222192-4222253)
chr5 (294-355)||(4623162-4623223)
chr5 (294-354)||(4219677-4219737)
chr5 (298-357)||(14463988-14464047)
chr5 (298-356)||(4624694-4624752)
chr5 (294-356)||(7348573-7348635)
[»] chr4 (44 HSPs)
chr4 (294-361)||(15523249-15523316)
chr4 (294-361)||(23494907-23494974)
chr4 (294-357)||(11153615-11153678)
chr4 (294-361)||(22434193-22434260)
chr4 (294-361)||(25447261-25447328)
chr4 (294-361)||(25937684-25937751)
chr4 (294-361)||(38962283-38962350)
chr4 (294-361)||(46193869-46193936)
chr4 (294-360)||(12234343-12234409)
chr4 (294-360)||(18763985-18764051)
chr4 (294-360)||(25447701-25447767)
chr4 (294-361)||(12234793-12234860)
chr4 (294-361)||(23494457-23494524)
chr4 (294-361)||(33109698-33109765)
chr4 (294-361)||(45082888-45082955)
chr4 (294-361)||(46193419-46193486)
chr4 (294-361)||(48526645-48526712)
chr4 (294-360)||(22434642-22434707)
chr4 (294-361)||(4219571-4219638)
chr4 (294-361)||(18751613-18751680)
chr4 (294-361)||(25938135-25938202)
chr4 (294-361)||(51021259-51021326)
chr4 (294-361)||(54995083-54995150)
chr4 (294-361)||(54995531-54995598)
chr4 (294-360)||(4220024-4220090)
chr4 (294-360)||(20470976-20471042)
chr4 (294-361)||(15523698-15523765)
chr4 (294-361)||(33109928-33109995)
chr4 (294-360)||(2118760-2118826)
chr4 (294-356)||(44892617-44892679)
chr4 (294-355)||(2118307-2118368)
chr4 (298-355)||(43243750-43243807)
chr4 (298-355)||(43281260-43281317)
chr4 (294-355)||(44890531-44890592)
chr4 (294-355)||(48293608-48293669)
chr4 (294-350)||(16318251-16318307)
chr4 (298-354)||(20958330-20958386)
chr4 (294-361)||(11153160-11153227)
chr4 (294-360)||(35363065-35363132)
chr4 (294-361)||(48526210-48526277)
chr4 (294-357)||(51020811-51020874)
chr4 (294-360)||(22170402-22170467)
chr4 (294-349)||(10258363-10258418)
chr4 (297-355)||(12503453-12503511)
[»] chr3 (42 HSPs)
chr3 (294-361)||(20840574-20840641)
chr3 (294-361)||(20841025-20841092)
chr3 (294-361)||(31779116-31779183)
chr3 (294-361)||(32535427-32535494)
chr3 (294-361)||(17464505-17464572)
chr3 (294-361)||(32534973-32535040)
chr3 (294-361)||(39555592-39555659)
chr3 (294-361)||(39556041-39556108)
chr3 (294-361)||(48453003-48453070)
chr3 (294-360)||(43973905-43973971)
chr3 (294-361)||(4275828-4275895)
chr3 (294-361)||(24301020-24301087)
chr3 (294-361)||(27393675-27393742)
chr3 (294-357)||(27394045-27394108)
chr3 (294-361)||(31778667-31778734)
chr3 (294-361)||(37727394-37727461)
chr3 (294-361)||(41046714-41046781)
chr3 (294-360)||(23644930-23644996)
chr3 (301-359)||(24300577-24300635)
chr3 (294-360)||(29801881-29801947)
chr3 (294-355)||(51473442-51473503)
chr3 (294-361)||(5136994-5137061)
chr3 (294-361)||(23644476-23644543)
chr3 (294-361)||(25853248-25853315)
chr3 (294-361)||(29801370-29801437)
chr3 (294-361)||(5137445-5137512)
chr3 (294-361)||(22424828-22424895)
chr3 (294-361)||(25853691-25853758)
chr3 (294-361)||(26274581-26274648)
chr3 (294-361)||(30098227-30098294)
chr3 (294-356)||(25612446-25612508)
chr3 (294-356)||(37222040-37222102)
chr3 (294-359)||(22425279-22425344)
chr3 (305-357)||(41047166-41047218)
chr3 (294-361)||(26275030-26275097)
chr3 (294-361)||(30104496-30104563)
chr3 (294-361)||(37726943-37727010)
chr3 (294-361)||(43973455-43973522)
chr3 (294-360)||(26837821-26837886)
chr3 (294-361)||(17464956-17465023)
chr3 (294-355)||(32695717-32695778)
chr3 (294-355)||(32697170-32697231)
[»] scaffold0295 (2 HSPs)
scaffold0295 (294-361)||(4807-4874)
scaffold0295 (294-359)||(5257-5322)
[»] scaffold0176 (2 HSPs)
scaffold0176 (294-361)||(19085-19152)
scaffold0176 (294-359)||(18849-18914)
[»] chr2 (34 HSPs)
chr2 (294-361)||(1978122-1978189)
chr2 (294-361)||(3025480-3025547)
chr2 (294-361)||(11090535-11090602)
chr2 (294-361)||(11090984-11091051)
chr2 (294-361)||(18450844-18450911)
chr2 (294-361)||(20444763-20444830)
chr2 (294-361)||(22374334-22374401)
chr2 (294-361)||(26538543-26538610)
chr2 (294-361)||(28616627-28616694)
chr2 (294-361)||(28617078-28617145)
chr2 (294-360)||(20440496-20440562)
chr2 (294-360)||(40027605-40027671)
chr2 (294-361)||(239367-239433)
chr2 (294-361)||(239816-239883)
chr2 (294-361)||(22374789-22374856)
chr2 (294-361)||(40027154-40027221)
chr2 (294-361)||(43058347-43058414)
chr2 (294-355)||(18451301-18451362)
chr2 (294-359)||(40815359-40815424)
chr2 (294-358)||(40815812-40815876)
chr2 (294-361)||(1978573-1978640)
chr2 (294-361)||(7446810-7446877)
chr2 (294-361)||(26538111-26538178)
chr2 (294-361)||(28847159-28847226)
chr2 (294-361)||(43058796-43058863)
chr2 (294-360)||(8425369-8425435)
chr2 (294-361)||(14432156-14432223)
chr2 (294-360)||(7446356-7446422)
chr2 (294-356)||(35781132-35781194)
chr2 (294-355)||(14432611-14432672)
chr2 (294-355)||(35779722-35779783)
chr2 (294-361)||(3025927-3025993)
chr2 (294-355)||(15551513-15551574)
chr2 (294-355)||(8972251-8972312)
[»] scaffold0951 (2 HSPs)
scaffold0951 (294-360)||(2132-2198)
scaffold0951 (294-355)||(1681-1742)
[»] scaffold1223 (2 HSPs)
scaffold1223 (294-361)||(767-834)
scaffold1223 (298-361)||(1205-1268)
[»] scaffold0417 (2 HSPs)
scaffold0417 (294-361)||(11087-11154)
scaffold0417 (299-361)||(10640-10702)
[»] scaffold0273 (2 HSPs)
scaffold0273 (294-361)||(4671-4738)
scaffold0273 (319-361)||(4242-4284)
[»] scaffold0007 (2 HSPs)
scaffold0007 (294-361)||(64769-64836)
scaffold0007 (294-361)||(64316-64383)
[»] scaffold0113 (1 HSPs)
scaffold0113 (294-360)||(28708-28774)
[»] scaffold0432 (2 HSPs)
scaffold0432 (294-361)||(10336-10403)
scaffold0432 (294-361)||(9946-10013)
[»] scaffold0027 (2 HSPs)
scaffold0027 (301-360)||(42190-42249)
scaffold0027 (294-361)||(42622-42689)
[»] scaffold0019 (1 HSPs)
scaffold0019 (294-357)||(134141-134204)
[»] scaffold1585 (1 HSPs)
scaffold1585 (294-361)||(581-648)
[»] scaffold0057 (2 HSPs)
scaffold0057 (294-354)||(61042-61102)
scaffold0057 (294-355)||(61928-61989)
[»] scaffold0157 (1 HSPs)
scaffold0157 (297-355)||(16966-17024)


Alignment Details
Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 46998617 - 46998463
Alignment:
Q  17 ggattttggggtttccatcaacactgacatgggtgaaagtggcgtcaaatgttccaaagtannnnnnnnn-----gaaggaaaatgttccaaagtattgt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||               |||||||||||||||||||||||||    
T  46998617 ggattttggggtttccatcaacactgacatgggtgaaagtggcgtcaaatgttctaaagttttttttttttttttgaaggaaaatgttccaaagtattgt 46998518  T
Q  112 caatttgaaagaagaaagaaaattttggttatttcaaacgtgtgttttgtgttag 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46998517 caatttgaaagaagaaagaaaattttggttatttcaaacgtgtgttttgtgttag 46998463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 5540349 - 5540282
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  5540349 tttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtcc 5540282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 33143931 - 33143998
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  33143931 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 33143998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 5539830 - 5539897
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||    
T  5539830 tttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtcc 5539897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 8678555 - 8678622
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||||||||||||    
T  8678555 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtcc 8678622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 18984133 - 18984200
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  18984133 tttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 18984200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 21856574 - 21856507
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||||    
T  21856574 tttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtcc 21856507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 29306967 - 29307034
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  29306967 tttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtcc 29307034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 29307473 - 29307406
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  29307473 tttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 29307406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 29870150 - 29870083
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||    
T  29870150 tttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtcc 29870083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 50970809 - 50970742
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  50970809 tttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 50970742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 33144450 - 33144389
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  33144450 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 33144389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 2733488 - 2733421
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||| |||||||||||||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  2733488 tttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtcc 2733421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 4636502 - 4636439
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacg 357  Q
    ||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||    
T  4636502 tttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacg 4636439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 15646726 - 15646659
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||| ||||  | ||||||||||||||||||||||||    
T  15646726 tttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtcc 15646659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 17433746 - 17433679
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||| ||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  17433746 tttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 17433679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 18984650 - 18984583
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||| ||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||    
T  18984650 tttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtcc 18984583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 21856056 - 21856123
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||  ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  21856056 tttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 21856123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 26859073 - 26859140
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||| ||||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  26859073 tttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtcc 26859140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 29869634 - 29869701
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || |||||||||||||| || | ||||||||||||||||||||||||    
T  29869634 tttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtcc 29869701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 50970292 - 50970359
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||||||   ||||||| ||||||||||||||||    
T  50970292 tttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtcc 50970359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 5962592 - 5962658
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||| ||| ||||||||||||||||||| | | |||||||||||||||||||||||    
T  5962592 tttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtc 5962658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 8679072 - 8679006
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| ||||| ||||||||||| | |||||||||||||||||| ||||    
T  8679072 tttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtc 8679006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 9018987 - 9019053
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| | ||||||||||| ||| | |||||||||||||||||||||||    
T  9018987 tttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtc 9019053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 15646206 - 15646267
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||    
T  15646206 tttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaa 15646267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 15173624 - 15173558
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||| |||||    
T  15173624 tttggtcctcgtgttttggcctactcacaaaactggtcctg-ccttttaaaacagaacaaaatggtcc 15173558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 39154551 - 39154484
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||||||   |||||||||| ||||||| |||||    
T  39154551 tttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtcc 39154484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 9019494 - 9019428
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    |||||||||||||||||| |||| |||| |||||||| ||| | |||||||||||||||||||||||    
T  9019494 tttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtc 9019428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 15173110 - 15173175
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    ||||||||||||||||||||||| |||||||||| |||||| | ||||||||  ||||||||||||    
T  15173110 tttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggt 15173175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 5963109 - 5963047
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    ||||||||||||||||||||||| ||||||||||| || || | |||||||| ||||||||||    
T  5963109 tttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaac 5963047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 52268304 - 52268366
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    |||||||||||| |||||||||  |||||||| |||||||| | |||||||||||||||||||    
T  52268304 tttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaac 52268366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 17433230 - 17433297
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||| |||||||||||| ||| |||||||  | || | ||||||||||||||||||||||||    
T  17433230 tttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtcc 17433297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 26859590 - 26859523
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||||||||||||| ||| ||||||||||  ||||| | |||||||||||||||| |||||||    
T  26859590 tttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtcc 26859523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 39154033 - 39154100
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| || ||||||||| || ||||||||||| || || | ||||||||||||||||||||||||    
T  39154033 tttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcc 39154100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 355
Target Start/End: Complemental strand, 47827108 - 47827058
Alignment:
Q  305 tgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    |||||||||||| |||||||| ||||| || | ||||||||||||||||||    
T  47827108 tgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaa 47827058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 47826978 - 47827039
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||||||| ||| |||||||| ||||| || | |||||||| | |||||||    
T  47826978 tttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 11445518 - 11445451
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  11445518 tttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtcc 11445451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 18504933 - 18504998
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  18504933 tttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggt 18504998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 12935171 - 12935238
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  12935171 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 12935238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 22219884 - 22219817
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  22219884 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 22219817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 2319686 - 2319753
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  2319686 tttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 2319753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 10899953 - 10900020
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| ||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  10899953 tttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 10900020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 12935688 - 12935621
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || ||||||||||||||||| |||| |||||||||||||||||||||    
T  12935688 tttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtcc 12935621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 18257151 - 18257218
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||    
T  18257151 tttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 18257218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 18257668 - 18257601
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  18257668 tttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 18257601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 20741114 - 20741181
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  20741114 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcc 20741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 23074013 - 23074080
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||||||||||    
T  23074013 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtcc 23074080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 23075659 - 23075592
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  23075659 tttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 23075592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 20741634 - 20741568
Alignment:
Q  295 ttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  20741634 ttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtcc 20741568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 11277113 - 11277048
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    |||||||||||||||||||| || ||||||||||||||||| | ||||||||||||||||||||||    
T  11277113 tttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggt 11277048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 1149479 - 1149546
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  1149479 tttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcc 1149546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 10900461 - 10900394
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||| |||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  10900461 tttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 10900394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 2322749 - 2322682
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| ||||||||||| ||| |||||||||| ||| || ||||||||||||||||||||||||||    
T  2322749 tttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtcc 2322682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 15828172 - 15828105
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| |  | |||||||||| |||||||||||||    
T  15828172 tttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtcc 15828105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 31470847 - 31470780
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||| ||||||| ||||| ||||||||||||| ||| | ||||||||||||||||||||||||    
T  31470847 tttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcc 31470780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 28472651 - 28472717
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||| | |||||||| |||||||| | |||||||||||||||||| ||||    
T  28472651 tttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtc 28472717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 29859840 - 29859906
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||| | |||||||| |||||||| | |||||||||||||||||| ||||    
T  29859840 tttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtc 29859906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 15827652 - 15827712
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaa 354  Q
    |||||||||||||||||||| || ||||||||||||| ||||| |||||||||| ||||||    
T  15827652 tttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaa 15827712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 1149963 - 1149896
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||| ||||| ||| |||||||||| || | |||||||| |||||||||||||||    
T  1149963 tttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtcc 1149896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 4811787 - 4811720
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||||||||||||||||| ||| ||||||| || ||  |||||||||||||||||||||||||    
T  4811787 tttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtcc 4811720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 11445001 - 11445068
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||| ||||||||| |  |||||||||||| |||| |||||    
T  11445001 tttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtcc 11445068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 18505450 - 18505383
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||| ||||||||||| ||||| | |||||||||| |||||||| ||||    
T  18505450 tttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtcc 18505383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 29033448 - 29033515
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||| |||||||||  |||||||| |||||||| | ||||||||||||||||||| ||||    
T  29033448 tttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcc 29033515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 31470329 - 31470391
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    |||| |||||||||||||||||| |||||||||||||| ||   |||||||||||||||||||    
T  31470329 tttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaac 31470391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 3835257 - 3835196
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||  |||||||| |||| |||||||| |||||||| || |||||||||||||||||    
T  3835257 tttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaa 3835196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 29035164 - 29035107
Alignment:
Q  298 gtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||| ||||| |||||||| ||||  || | ||||||||||||||||||    
T  29035164 gtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaa 29035107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 41681148 - 41681215
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  41681148 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 41681215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 13225170 - 13225103
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  13225170 tttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtcc 13225103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 19176304 - 19176371
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||    
T  19176304 tttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtcc 19176371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 19176821 - 19176754
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||    
T  19176821 tttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtcc 19176754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 31133751 - 31133684
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  31133751 tttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtcc 31133684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 41681665 - 41681598
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||    
T  41681665 tttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtcc 41681598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 9928923 - 9928990
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||  ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  9928923 tttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 9928990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 11656469 - 11656536
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||| ||||||||||||||    
T  11656469 tttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtcc 11656536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 11656988 - 11656921
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||| |||||    
T  11656988 tttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtcc 11656921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 33328172 - 33328239
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||| || || | ||||||||||||||||||||||||    
T  33328172 tttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcc 33328239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 44831261 - 44831328
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||| |||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||    
T  44831261 tttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtcc 44831328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 12571877 - 12571943
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| ||||||||||||| ||  | |||||||||||||||||||||||    
T  12571877 tttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtc 12571943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 8074082 - 8074021
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    |||||||||||||||||||||||||||||||| || || |||| ||||||||||||||||||    
T  8074082 tttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaa 8074021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 44831776 - 44831711
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    |||||||||||||||||||| || |||||||||||||||||   ||||||||||||||||||||||    
T  44831776 tttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggt 44831711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 4629818 - 4629877
Alignment:
Q  301 ctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||||    
T  4629818 ctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtc 4629877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 9178166 - 9178099
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||| || || | | ||||||||||||||||||||||    
T  9178166 tttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtcc 9178099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 9930188 - 9930121
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||| |||||||||| ||||||||||||||||| | |||||||| ||||||||| |||||    
T  9930188 tttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtcc 9930121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 34541079 - 34541012
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||||||   |||||||||| ||||||| |||||    
T  34541079 tttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtcc 34541012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 33742936 - 33742996
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaa 354  Q
    |||||||||||||||||| |||| |||||||||||||| || | |||||||||||||||||    
T  33742936 tttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaa 33742996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 12572382 - 12572315
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||| |||||||||| ||| ||   ||||||||||||||||||||||||    
T  12572382 tttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtcc 12572315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 31133234 - 31133301
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| |||| ||||||||||||||| | | |||||||||| |||||||| ||||    
T  31133234 tttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtcc 31133301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 13224655 - 13224716
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    ||||||| ||||||||||||||| ||||||||||||| ||| | |||||||||||||||||||    
T  13224655 tttggtcttcgtgttttggcctactcacgaaactggt-ctgcccttttaaaacagaacaaaac 13224716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 33328671 - 33328604
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||| ||||| |||||||||| ||| ||   |||||||||| |||||||||||||    
T  33328671 tttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtcc 33328604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 11337053 - 11336987
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||| |||||||||||| || |||||||| |||||| | | ||||||||||||| |||||||||    
T  11337053 tttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtc 11336987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 361
Target Start/End: Complemental strand, 4630309 - 4630250
Alignment:
Q  302 tcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||| ||| |||||||| ||||||||  |||||||||||||| | ||||||||    
T  4630309 tcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtcc 4630250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 19590539 - 19590606
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  19590539 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 19590606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 19591056 - 19590989
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||| |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  19591056 tttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 19590989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 19830434 - 19830501
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  19830434 tttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtcc 19830501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 29099864 - 29099931
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  29099864 tttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtcc 29099931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 35289432 - 35289365
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  35289432 tttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 35289365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 38859172 - 38859105
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||    
T  38859172 tttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtcc 38859105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 19830950 - 19830885
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    ||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |||||||||||    
T  19830950 tttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggt 19830885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 37786781 - 37786848
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| | ||||||||||||||| | |||||||||| |||||||||||||    
T  37786781 tttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtcc 37786848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 2659371 - 2659305
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||| ||||||||||||||| |||||||||| || | |||||||||||||||||||||||    
T  2659371 tttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtc 2659305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 38858657 - 38858723
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    |||||||||||||||||||| || |||||||||||||||||   |||||||||||||||||||||||    
T  38858657 tttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtc 38858723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 4641972 - 4641908
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||   |||||||||||| ||||||||||||||||||||||||    
T  4641972 tttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtcc 4641908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 37787298 - 37787233
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    ||||||||||||||||||||||| |||||||||||||||||   ||||||| ||||||||||||||    
T  37787298 tttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggt 37787233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 361
Target Start/End: Original strand, 2658857 - 2658920
Alignment:
Q  298 gtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||| |||||    
T  2658857 gtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtcc 2658920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 32004628 - 32004695
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||| || ||||| | |||||||||||||||||| |||||    
T  32004628 tttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtcc 32004695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 34534322 - 34534255
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||| |||||||||||||||| ||||||||||| ||||| |  |||||||||||||||||||||||    
T  34534322 tttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtcc 34534255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 35288917 - 35288984
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| |||| |||||||||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  35288917 tttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcc 35288984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 29100382 - 29100316
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||| ||| |||| ||| |||||||| | |||||||||||||||||||||||    
T  29100382 tttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtc 29100316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 28584449 - 28584392
Alignment:
Q  298 gtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  28584449 gtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaa 28584392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 4478231 - 4478175
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaa 350  Q
    |||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  4478231 tttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaa 4478175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 23953260 - 23953193
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||  ||| ||||||||||||||| | | ||| ||||||||||||||||||||    
T  23953260 tttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtcc 23953193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 32005145 - 32005078
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||| ||||||||| || |||||||||||||| || | |||||||| |||||||||||||||    
T  32005145 tttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcc 32005078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 4641454 - 4641520
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    |||||||||||||||||||| || |||||||||||||||||   |||| ||||| ||||||||||||    
T  4641454 tttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtc 4641520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 34533805 - 34533871
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| |||||||||||||| ||   ||||||||||||| |||| ||||    
T  34533805 tttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtc 34533871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 23952744 - 23952812
Alignment:
Q  294 tttggtcctcgtgttttggcc-tattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| || || |||||||| ||||| || | ||||||||||||||||||||||||    
T  23952744 tttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtcc 23952812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 38160965 - 38161026
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||| ||||||||||| |||||||| |  ||||| | ||||||||||||||||||    
T  38160965 tttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaa 38161026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 2865286 - 2865219
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  2865286 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 2865219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 15372404 - 15372337
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  15372404 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 15372337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 18183500 - 18183433
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  18183500 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 18183433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 19359667 - 19359600
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  19359667 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 19359600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 5818943 - 5819009
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  5818943 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 5819009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 5819460 - 5819394
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  5819460 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 5819394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 8647452 - 8647519
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  8647452 tttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtcc 8647519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 8647969 - 8647902
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  8647969 tttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtcc 8647902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 8461462 - 8461395
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||||||||||||||||||||||||    
T  8461462 tttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtcc 8461395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 14215774 - 14215707
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| |||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  14215774 tttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtcc 14215707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 18182984 - 18183051
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| ||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  18182984 tttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 18183051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 19359150 - 19359217
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||| |||||||||||| ||||||||||||||||| | |||||||| |||||||||||||||    
T  19359150 tttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtcc 19359217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 24331573 - 24331640
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||  ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  24331573 tttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 24331640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 24362367 - 24362300
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||| ||||||||||    
T  24362367 tttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtcc 24362300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 29455273 - 29455206
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  29455273 tttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcc 29455206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 8460944 - 8461010
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||| |||| |||||||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  8460944 tttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 8461010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 15708985 - 15709052
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||| ||||||||||||| |||||||||||||  || | ||||||||||||||||||||||||    
T  15708985 tttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtcc 15709052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 164205 - 164271
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    |||||||||||||||||| |||| ||||||||||||||||| | ||||| |||| ||||||||||||    
T  164205 tttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtc 164271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 16018603 - 16018670
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| |||||||||||||||||||||||| || || || | |||||||| |||||||||||||||    
T  16018603 tttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtcc 16018670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 29454754 - 29454821
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| | ||||||||||||| |||||||| ||||| || | ||||||||||||||||||||||||    
T  29454754 tttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtcc 29454821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 6018328 - 6018389
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    |||||| |||||||||||  ||| |||||||||||||| |||| ||||||||||||||||||    
T  6018328 tttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaa 6018389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 24332094 - 24332026
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtcttttt-aaaacagaacaaaacggtcc 361  Q
    ||||||| || ||||||||| || ||||||||||| ||||| |||||| ||||||||||||||||||||    
T  24332094 tttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcc 24332026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 164722 - 164655
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| ||||| |||||||||| | |||| ||||||||| || | ||||||||||||||||||||||||    
T  164722 tttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtcc 164655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 2864768 - 2864835
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||| ||||||||||||| |||||||| || || || | |||||||||| |||||||||||||    
T  2864768 tttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtcc 2864835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 14215255 - 14215322
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || |||||||||||||  |  | |||||||||||||||||| |||||    
T  14215255 tttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtcc 14215322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 7349548 - 7349486
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    ||||||||||||||||||| ||| |||||||| ||||||||   |||||||||| ||||||||    
T  7349548 tttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaac 7349486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 25000620 - 25000554
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||| || |||||||||||| |||||||| ||||| |||  |||||||||||||||||| ||||    
T  25000620 tttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtc 25000554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 4222253 - 4222192
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||||||| ||  |||||||| ||||| || | ||||||||||||||||||    
T  4222253 tttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaa 4222192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 4623162 - 4623223
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||| |||||||||| | || |||||||| |||||||| || |||||||||||||||||    
T  4623162 tttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaa 4623223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 4219677 - 4219737
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaa 354  Q
    |||| |||||||||||||| ||||| || ||| ||||| || |||||||||||||||||||    
T  4219677 tttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaa 4219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 357
Target Start/End: Complemental strand, 14464047 - 14463988
Alignment:
Q  298 gtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacg 357  Q
    ||||||||||||||||||| ||||||||||  |  |||| |||||||| |||||||||||    
T  14464047 gtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacg 14463988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 356
Target Start/End: Complemental strand, 4624752 - 4624694
Alignment:
Q  298 gtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    |||||||||||||  |||| |||||||| ||||| ||||| ||||||||| ||||||||    
T  4624752 gtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaac 4624694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 7348573 - 7348635
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    |||||||||| |||||| | ||| |||||||| ||||| || | |||||||||||||||||||    
T  7348573 tttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaac 7348635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 15523249 - 15523316
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  15523249 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 15523316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 23494974 - 23494907
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  23494974 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 23494907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 11153678 - 11153615
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacg 357  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  11153678 tttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacg 11153615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 22434193 - 22434260
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||    
T  22434193 tttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 22434260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 25447261 - 25447328
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||    
T  25447261 tttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtcc 25447328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 25937684 - 25937751
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  25937684 tttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 25937751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 38962350 - 38962283
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||    
T  38962350 tttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtcc 38962283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 46193936 - 46193869
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||    
T  46193936 tttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtcc 46193869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 12234343 - 12234409
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    |||||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||||||    
T  12234343 tttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 12234409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 18764051 - 18763985
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||||    
T  18764051 tttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtc 18763985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 25447767 - 25447701
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||| ||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  25447767 tttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 25447701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 12234860 - 12234793
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||| || || | ||||||||||||||||||||||||    
T  12234860 tttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcc 12234793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 23494457 - 23494524
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||| ||||||    
T  23494457 tttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtcc 23494524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 33109698 - 33109765
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || |||||||||||||||||   ||||||||||||||||||||||||    
T  33109698 tttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcc 33109765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 45082955 - 45082888
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || |||||||||||||| || | ||||||||||||||||||||||||    
T  45082955 tttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 45082888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 46193419 - 46193486
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||| |||||    
T  46193419 tttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtcc 46193486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 48526712 - 48526645
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||| |||||||||||||| || | ||||||||||||||||||||||||    
T  48526712 tttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtcc 48526645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 22434707 - 22434642
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||| ||||||||||||||||||    
T  22434707 tttggtcctcgtgttttggcctactcacgaaactggtcctgccatttt-aaacagaacaaaacggtc 22434642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 4219571 - 4219638
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||| | |||||||| ||||    
T  4219571 tttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtcc 4219638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 18751613 - 18751680
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||  ||||||||| || | ||||||||||||||||||||||||    
T  18751613 tttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtcc 18751680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 25938202 - 25938135
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||| ||||||||||||| |||||||| |||||||| | ||||||||||||||||||| ||||    
T  25938202 tttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtcc 25938135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 51021326 - 51021259
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||||||||||||||||| |||||||| |||||||| | |||||||||| |||||||||||||    
T  51021326 tttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcc 51021259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 54995083 - 54995150
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||| |||||||| |||||||||| |||||  | ||||||||||||||||||||||||    
T  54995083 tttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtcc 54995150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 54995598 - 54995531
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||| || || | |||||||| |||||||||||||||    
T  54995598 tttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtcc 54995531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 4220090 - 4220024
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| ||||||||||| |||||   |||||||||||||||||| ||||    
T  4220090 tttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtc 4220024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 20471042 - 20470976
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| | |||||||||||| |  | |||||||||||||||||||||||    
T  20471042 tttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtc 20470976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 15523765 - 15523698
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| ||||||||||| ||| ||||||||||||||||| | |||||||||| ||||||| |||||    
T  15523765 tttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtcc 15523698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 33109995 - 33109928
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||| |||||||||||  |||||||| |||||||| | |||||||||| |||||||||||||    
T  33109995 tttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtcc 33109928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 2118826 - 2118760
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||| ||||||||||||||  ||| |||||||||||| || |||||||||| ||||||||||||    
T  2118826 tttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtc 2118760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 44892679 - 44892617
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    |||||||||||||||||| |||| |||||||| |||| ||| | |||||||||||||||||||    
T  44892679 tttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaac 44892617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 2118307 - 2118368
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||| ||||||||||||| |||||||| |||||||| | |||||||||| |||||||    
T  2118307 tttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaa 2118368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 43243807 - 43243750
Alignment:
Q  298 gtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||||||| |||||||| ||||| || | ||||||||||||||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaa 43243750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 43281317 - 43281260
Alignment:
Q  298 gtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||||||| |||||||| ||||| || | ||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaa 43281260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 44890531 - 44890592
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||| |||||||| ||||||||||||| ||||| || | ||||||||||||||||||    
T  44890531 tttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaa 44890592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 48293608 - 48293669
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    |||||||||||||||||||| || |||||||| || |||||||| ||||||||| |||||||    
T  48293608 tttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaa 48293669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 16318307 - 16318251
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaa 350  Q
    ||||||||||||||||||||||| |||| |||||| ||||| | |||||||||||||    
T  16318307 tttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 354
Target Start/End: Complemental strand, 20958386 - 20958330
Alignment:
Q  298 gtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaa 354  Q
    |||||||| |||||||||| |||||||| |||||||| | |||||||||||||||||    
T  20958386 gtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaa 20958330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 11153160 - 11153227
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||| ||| ||||| || | |||||||| |||| ||||||||||    
T  11153160 tttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtcc 11153227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 35363132 - 35363065
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctg-tctttttaaaacagaacaaaacggtc 360  Q
    |||| |||||||||||||||||| ||||||||||||| ||| |||||| |||| | ||||||||||||    
T  35363132 tttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtc 35363065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 48526210 - 48526277
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||| ||||||||||| |||| ||| ||||||||  ||| | ||||||||||||||||||||||||    
T  48526210 tttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtcc 48526277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 51020811 - 51020874
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacg 357  Q
    |||| ||||| |||||||||  |||||| |||||||||||| | ||||||||||||||||||||    
T  51020811 tttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacg 51020874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 22170467 - 22170402
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    |||||||||||||||||| |||| | |||||| || ||||| |||||||||||| ||||||||||||    
T  22170467 tttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtc 22170402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 10258418 - 10258363
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacaga 349  Q
    ||||||||||||||| ||||||| ||| |||| |||||||| | ||||||||||||    
T  10258418 tttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacaga 10258363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 12503453 - 12503511
Alignment:
Q  297 ggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||| | || ||||||||||| ||| | | ||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaa 12503511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 20840574 - 20840641
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  20840574 tttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtcc 20840641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 20841092 - 20841025
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  20841092 tttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtcc 20841025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 31779183 - 31779116
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  31779183 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 31779116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 32535494 - 32535427
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  32535494 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 32535427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 17464505 - 17464572
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||||||||| ||||||||||| || | ||||||||||||||||||||||||    
T  17464505 tttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtcc 17464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 32534973 - 32535040
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||||||||    
T  32534973 tttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtcc 32535040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 39555592 - 39555659
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  39555592 tttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtcc 39555659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 39556108 - 39556041
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  39556108 tttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcc 39556041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 48453003 - 48453070
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| ||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  48453003 tttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtcc 48453070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 43973971 - 43973905
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| ||||||||||||| ||| | |||||||||||||||||||||||    
T  43973971 tttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtc 43973905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 4275895 - 4275828
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| ||   ||||||||||||||||||||||||    
T  4275895 tttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcc 4275828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 24301087 - 24301020
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||| |||||||| | |||||||||| |||||||||||||    
T  24301087 tttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtcc 24301020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 27393675 - 27393742
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| |||| |||| |||||||||||| | ||||||||||||||||||||||||    
T  27393675 tttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtcc 27393742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 27394108 - 27394045
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacg 357  Q
    ||||||||||||||||||||||| ||||||||  ||||||| ||||||||||||||||||||||    
T  27394108 tttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacg 27394045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 31778667 - 31778734
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||| ||| ||||||||||||| | ||||||||||||||||||||||||    
T  31778667 tttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtcc 31778734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 37727461 - 37727394
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||| |||||||||||| |||||||||||||||||   ||||||||||||||||||||||||    
T  37727461 tttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcc 37727394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 41046714 - 41046781
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| | |||||||||||| || | ||||||||||||||||||||||||    
T  41046714 tttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 41046781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 23644996 - 23644930
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| |||||||| |||||||  | |||||||||||||||||||||||    
T  23644996 tttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtc 23644930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 24300577 - 24300635
Alignment:
Q  301 ctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||    
T  24300577 ctcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggt 24300635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 29801947 - 29801881
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    |||| ||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  29801947 tttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 29801881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 51473442 - 51473503
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||    
T  51473442 tttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaa 51473503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 5136994 - 5137061
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||| | |||||||| ||||| || | ||||||||||||||||||||||||    
T  5136994 tttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtcc 5137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 23644476 - 23644543
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||| |||||||||| |||||||| |||||||| | ||||||||||||||||||| ||||    
T  23644476 tttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtcc 23644543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 25853248 - 25853315
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||| ||||| || | |||||||| |||||||||||||||    
T  25853248 tttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtcc 25853315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 29801370 - 29801437
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| |||||||||||| || |||| |||||||||||| | ||||||||||||||||||||||||    
T  29801370 tttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtcc 29801437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 5137512 - 5137445
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||| ||||||||| ||| | |||||||| ||||||||| |||||    
T  5137512 tttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtcc 5137445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 22424828 - 22424895
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||| |||||||||  ||||| | ||||||||||| ||||| ||||||||||||||||||||||||    
T  22424828 tttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtcc 22424895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 25853758 - 25853691
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||||||||||||  ||| |||||||||||||| |||| |||||||||||||||||| |||||    
T  25853758 tttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtcc 25853691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 26274581 - 26274648
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||| || |||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  26274581 tttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 26274648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 30098294 - 30098227
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| | || |||||||||||||| || | |||||||||||||||||| |||||    
T  30098294 tttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtcc 30098227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 25612508 - 25612446
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    |||||||||||||||||| |||| |||||||| |||||||| | |||||||| ||||||||||    
T  25612508 tttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaac 25612446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 37222102 - 37222040
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    |||||||||||||||||| |||| |||| ||| |||||||| | |||||||||||||||||||    
T  37222102 tttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaac 37222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 22425344 - 22425279
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    |||||||||||||||| |||||| ||||||| |||||| || | || |||||||||||||||||||    
T  22425344 tttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggt 22425279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 41047218 - 41047166
Alignment:
Q  305 tgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacg 357  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||| ||||||    
T  41047218 tgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg 41047166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 26275097 - 26275030
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||| ||| |||||||| |||| ||||||||||||||||  | ||||||||||||| ||||||||||    
T  26275097 tttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtcc 26275030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 30104496 - 30104563
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| |||| |||||||| |||||||| | |||||||||| || | ||||||||    
T  30104496 tttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtcc 30104563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 37726943 - 37727010
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||  | ||||||||||| ||| | |||||||||| |||||||||||||    
T  37726943 tttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtcc 37727010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 43973455 - 43973522
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| |||| |||||||| || |  || | ||||||||||||||||||||||||    
T  43973455 tttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtcc 43973522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 26837886 - 26837821
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| | ||||||||||| ||| |  ||||||| ||||||||||||||    
T  26837886 tttggtcctcgtgttttggcctacttacgaaactggttctg-ccctttaaaatagaacaaaacggtc 26837821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 17465023 - 17464956
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||||||  || ||||||||||    | |||||||| |||||||||||||||    
T  17465023 tttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtcc 17464956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 32695717 - 32695778
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    |||||||||| | |||||||||| | |||||| || |  |||||||||||||||||||||||    
T  32695717 tttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaa 32695778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 32697231 - 32697170
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||||| ||||| |||||||| | |||  | | ||||||||||||||||||    
T  32697231 tttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaa 32697170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 4807 - 4874
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  4807 tttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 5322 - 5257
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||||    
T  5322 tttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggt 5257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 19152 - 19085
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||    
T  19152 tttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtcc 19085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 18849 - 18914
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    |||||||||  |||||||||||| |||||||||||||| || | |||||||||| |||||||||||    
T  18849 tttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggt 18914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 1978122 - 1978189
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  1978122 tttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 1978189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 3025480 - 3025547
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||    
T  3025480 tttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcc 3025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 11090535 - 11090602
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||    
T  11090535 tttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtcc 11090602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 11091051 - 11090984
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  11091051 tttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 11090984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 18450844 - 18450911
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||||||||    
T  18450844 tttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtcc 18450911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 20444763 - 20444830
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||    
T  20444763 tttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 20444830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 22374334 - 22374401
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  22374334 tttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 22374401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 26538610 - 26538543
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||||||||||||    
T  26538610 tttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtcc 26538543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 28616627 - 28616694
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  28616627 tttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtcc 28616694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 28617145 - 28617078
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| |||||    
T  28617145 tttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtcc 28617078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 20440562 - 20440496
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||| | ||||||||||||||||| | |||||||||||||||||||||||    
T  20440562 tttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 20440496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 40027671 - 40027605
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||    
T  40027671 tttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtc 40027605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 239367 - 239433
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| ||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  239367 tttggtcatcgtgttttggcctactcacgaaactggtcctg-ccttttaaaacagaacaaaacggtcc 239433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 239883 - 239816
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||| |||||    
T  239883 tttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtcc 239816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 22374856 - 22374789
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| |||||||| ||||| || | ||||||||||||||||||||||||    
T  22374856 tttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtcc 22374789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 40027154 - 40027221
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| ||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||    
T  40027154 tttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc 40027221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 43058347 - 43058414
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||    
T  43058347 tttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtcc 43058414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 18451362 - 18451301
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||||    
T  18451362 tttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaa 18451301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 40815359 - 40815424
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggt 359  Q
    ||||||||||||||||||||||| |||||||||||||| || | |||||||||| |||||||||||    
T  40815359 tttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggt 40815424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 40815876 - 40815812
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacgg 358  Q
    ||||||||||||||||||||||| |||||||||||||  || | |||||||||||||||||||||    
T  40815876 tttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacgg 40815812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 1978640 - 1978573
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||| ||||||||||||| |||||||| |||||||| | ||||||||||||||||||| ||||    
T  1978640 tttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtcc 1978573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 7446877 - 7446810
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| ||||||||||||| | || ||||||||||||||||| | ||||||||||||||||||||||||    
T  7446877 tttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 7446810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 26538111 - 26538178
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || ||||||||||||| ||| | ||||||||||||||||| ||||||    
T  26538111 tttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtcc 26538178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 28847226 - 28847159
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||| |||||||||||||||||   |||||||||| |||||||||||||    
T  28847226 tttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtcc 28847159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 43058863 - 43058796
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||||||||||||||||| |||||||||||||||||   |||||||||||||||||| |||||    
T  43058863 tttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtcc 43058796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 8425369 - 8425435
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||| ||||||||||||| |||||||| ||||| |  |||||||||||||||||||||||||    
T  8425369 tttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc 8425435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 14432156 - 14432223
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| ||| |||||||||| || | |||||||| | |||||||||||||    
T  14432156 tttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtcc 14432223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 7446356 - 7446422
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    |||| |||||||||||||| ||| ||| |||| |||||||| | |||||||||||||||||||||||    
T  7446356 tttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtc 7446422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 35781194 - 35781132
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaac 356  Q
    |||| |||||||||||||||||| |||||||| ||||| || | |||||||||||||||||||    
T  35781194 tttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaac 35781132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 14432672 - 14432611
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||||||||||| ||| |||||||||| || | ||||||||||||| ||||    
T  14432672 tttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaa 14432611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 35779722 - 35779783
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    |||||||||||||||||| | || |||||||| |||||||| | ||||||||||||||||||    
T  35779722 tttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaa 35779783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 3025993 - 3025927
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || |||||||| |||| ||| | |||||||||| |||||||||||||    
T  3025993 tttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtcc 3025927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 15551513 - 15551574
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    |||||||||||||||||||  || |||||||| ||||| || |||||||||||| |||||||    
T  15551513 tttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaa 15551574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 8972251 - 8972312
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    |||||||||||||||||||| |  |||||||| ||||| || | ||| ||||||||||||||    
T  8972251 tttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaa 8972312  T

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Target: scaffold0951 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 2198 - 2132
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||||    
T  2198 tttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtc 2132  T

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Target: scaffold0951; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 1681 - 1742
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    |||||||||| |||||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  1681 tttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 1742  T

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Target: scaffold1223 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 767 - 834
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| ||||||||||||||| |||||| |||||||||| | ||||||||||||||||||||||||    
T  767 tttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtcc 834  T

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Target: scaffold1223; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 1268 - 1205
Alignment:
Q  298 gtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||    
T  1268 gtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 1205  T

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Target: scaffold0417 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 11154 - 11087
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||||||| | ||||||||||||||| | |||||||||| |||||||||||||    
T  11154 tttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtcc 11087  T

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Target: scaffold0417; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 299 - 361
Target Start/End: Original strand, 10640 - 10702
Alignment:
Q  299 tcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtcc 10702  T

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Target: scaffold0273 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 4738 - 4671
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||| |||||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||    
T  4738 tttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 4671  T

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Target: scaffold0273; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 4242 - 4284
Alignment:
Q  319 cacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||| | |||||||||| |||||||||||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtcc 4284  T

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Target: scaffold0007 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 64836 - 64769
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||||| || ||||||||||||||| | | ||||||||||||||||||||||||    
T  64836 tttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcc 64769  T

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Target: scaffold0007; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 64316 - 64383
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||||||||||||||||| | || ||||||||||| ||||| | ||||||||||||||||||||||||    
T  64316 tttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtcc 64383  T

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Target: scaffold0113 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 28774 - 28708
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    ||||||| ||||||||||||||| | |||||||||||| || | |||||||||||||||||||||||    
T  28774 tttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtc 28708  T

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Target: scaffold0432 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 10403 - 10336
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||||| ||| |||||||||||||  |  | ||||||||||||||||||||||||    
T  10403 tttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtcc 10336  T

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Target: scaffold0432; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 9946 - 10013
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||||||||||||||| ||||||||||||||||| || || | |||||| | ||||||||| |||||    
T  9946 tttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtcc 10013  T

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Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 42190 - 42249
Alignment:
Q  301 ctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtc 360  Q
    |||||||||||| ||| ||||||||||| ||||| | |||||||||||||||||||||||    
T  42190 ctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtc 42249  T

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Target: scaffold0027; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 42689 - 42622
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    ||||| ||||||||||||| ||| ||| ||||||| | ||| | ||||||||||||||||||||||||    
T  42689 tttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtcc 42622  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 134204 - 134141
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacg 357  Q
    ||||||||||||||||||||||| |||||||||| ||| || | |||||| |||||||||||||    
T  134204 tttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacg 134141  T

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Target: scaffold1585 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 581 - 648
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaacggtcc 361  Q
    |||| |||||||||||||||||| |||||||| || || || | ||||||||||||||||||| ||||    
T  581 tttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtcc 648  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 61042 - 61102
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaa 354  Q
    |||| |||||||||||||||||| |||||||| || ||||| | |||||||| ||||||||    
T  61042 tttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold0057; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 61989 - 61928
Alignment:
Q  294 tttggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    |||| |||||||||||||| ||| |||||||| |||||||  | |||||||| |||||||||    
T  61989 tttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaa 61928  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 17024 - 16966
Alignment:
Q  297 ggtcctcgtgttttggcctattcacgaaactggtcctgtctttttaaaacagaacaaaa 355  Q
    ||||||||||||||| | || ||||||||||| ||| | | ||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaa 16966  T

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