View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21616_high_14 (Length: 311)

Name: NF21616_high_14
Description: NF21616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21616_high_14
NF21616_high_14
[»] chr7 (29 HSPs)
chr7 (17-303)||(8591214-8591500)
chr7 (158-302)||(8602691-8602835)
chr7 (169-299)||(8647669-8647799)
chr7 (155-296)||(7876841-7876982)
chr7 (167-290)||(8582629-8582752)
chr7 (205-299)||(13332154-13332248)
chr7 (205-296)||(10493008-10493099)
chr7 (198-299)||(8584540-8584641)
chr7 (170-299)||(8630197-8630326)
chr7 (165-293)||(8546639-8546767)
chr7 (163-299)||(8635503-8635639)
chr7 (223-299)||(8655371-8655447)
chr7 (169-304)||(8610632-8610767)
chr7 (205-299)||(3148375-3148469)
chr7 (169-299)||(8668433-8668563)
chr7 (170-304)||(29576988-29577122)
chr7 (167-299)||(8538770-8538902)
chr7 (199-266)||(8660242-8660309)
chr7 (199-299)||(17261390-17261490)
chr7 (169-299)||(6790378-6790508)
chr7 (199-266)||(1302309-1302376)
chr7 (167-266)||(8568804-8568903)
chr7 (193-296)||(8577281-8577384)
chr7 (158-304)||(29581164-29581310)
chr7 (180-244)||(8382289-8382353)
chr7 (167-290)||(8572556-8572679)
chr7 (169-224)||(8639789-8639844)
chr7 (190-299)||(27829349-27829458)
chr7 (203-287)||(8104067-8104151)
[»] chr1 (3 HSPs)
chr1 (214-299)||(15596072-15596157)
chr1 (205-299)||(4677544-4677638)
chr1 (166-300)||(34465251-34465385)
[»] chr4 (6 HSPs)
chr4 (169-299)||(9323068-9323198)
chr4 (169-299)||(9377547-9377677)
chr4 (169-299)||(9335040-9335169)
chr4 (169-287)||(23586538-23586656)
chr4 (169-266)||(30776085-30776182)
chr4 (198-266)||(35133451-35133519)
[»] chr2 (9 HSPs)
chr2 (198-304)||(12257913-12258019)
chr2 (166-299)||(12235763-12235896)
chr2 (169-293)||(12244413-12244537)
chr2 (205-304)||(16656599-16656698)
chr2 (214-300)||(43626333-43626419)
chr2 (214-299)||(16661070-16661155)
chr2 (170-293)||(14705432-14705555)
chr2 (166-293)||(7543242-7543369)
chr2 (208-293)||(12000340-12000425)
[»] chr5 (2 HSPs)
chr5 (214-299)||(42554191-42554276)
chr5 (205-299)||(28220951-28221045)
[»] chr8 (2 HSPs)
chr8 (167-293)||(12529834-12529960)
chr8 (205-299)||(43745828-43745919)
[»] chr6 (1 HSPs)
chr6 (199-242)||(28911312-28911355)


Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 8591214 - 8591500
Alignment:
Q  17 atcaacctctttgcatctgcagcagaaaaagtgttactgatctaaacattgttttgttctcatcatctcatgaaactatagacaaactaaatataataac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8591214 atcaacctctttgcatctgcagcagaaaaagtgttactgatctaaacattgttttgttctcatcatttcatgaaaccatagacaaactaaatataataac 8591313  T
Q  117 taccactacgaattactaataaataaaccatgcaggaagataaaaagataaattaccgaagacagtgtttgttgggttagaagcagcctgattttttgca 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  8591314 taccactacgaattactaataaataaaccatgcaggaagataaaaagataaattaccgaagacagtgtttgctgggttagaagcagcctggttttttgca 8591413  T
Q  217 gcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctctgct 303  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8591414 gcatcaccaatcaacctttgatcattagtaaaagcaacaaaagaaggtgtaattctatttccttgatcattgtgaataatctctgct 8591500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 8602691 - 8602835
Alignment:
Q  158 aaaaagataaattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaa 257  Q
    |||||||||||||||| |||| ||||||   |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  8602691 aaaaagataaattaccaaagatagtgttgactgggttagaagcagcctgatttttggcagcatcaccgatcaaccttttatcatcagtaaaagcaacaaa 8602790  T
Q  258 cgaaggtgtaattctatttccttgatcattgtgaataatctctgc 302  Q
     ||||| ||| |||| |||||||||||||||||||||||||||||    
T  8602791 agaaggagtagttctgtttccttgatcattgtgaataatctctgc 8602835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 169 - 299
Target Start/End: Original strand, 8647669 - 8647799
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaa 268  Q
    ||||| ||||||||||| || ||||||||||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||| |||||||||     
T  8647669 ttaccaaagacagtgttggtagggttagaagcagcctgatttttagcggcatcaccaatcaacctttgatcatcggtgaaagcaacaaaagaaggtgtag 8647768  T
Q  269 ttctatttccttgatcattgtgaataatctc 299  Q
    |||| ||||||||||||||||||||||||||    
T  8647769 ttctgtttccttgatcattgtgaataatctc 8647799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 7876982 - 7876841
Alignment:
Q  155 gataaaaagataaattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaac 254  Q
    ||||||||||||| ||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||||||||  || ||||||||    
T  7876982 gataaaaagataagttaccaaagacagtgttggatgggttagaggcagcctgatttttggcagcatcaccaatcaacctttgatcattcgtgaaagcaac 7876883  T
Q  255 aaacgaaggtgtaattctatttccttgatcattgtgaataat 296  Q
    ||| ||||||||  |||| || ||||| ||||||||||||||    
T  7876882 aaaagaaggtgttgttctgttgccttgttcattgtgaataat 7876841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 8582629 - 8582752
Alignment:
Q  167 aattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgt 266  Q
    |||||||  ||| |||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||||  || ||||||||||||| | ||||||||    
T  8582629 aattaccatagatagtgttggttgggttagaagcagcttgatttttggcagcatcaccaatcaatctttgagaattagtaaaagcaacacaagaaggtgt 8582728  T
Q  267 aattctatttccttgatcattgtg 290  Q
      || | |||||||||||||||||    
T  8582729 tgttttgtttccttgatcattgtg 8582752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 299
Target Start/End: Complemental strand, 13332248 - 13332154
Alignment:
Q  205 tgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctc 299  Q
    ||||| || ||||||||||||||||| ||||||||||   | ||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  13332248 tgattcttggcagcatcaccaatcaatctttgatcattgttgaaagcaacaaaagaaggtgtagttctatttccttgatcattgtgaataatctc 13332154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 296
Target Start/End: Complemental strand, 10493099 - 10493008
Alignment:
Q  205 tgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataat 296  Q
    ||||| || ||||||||||| ||||||||||||||||   | ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  10493099 tgattcttagcagcatcaccgatcaacctttgatcattgttgaaagcaacaaaagaaggtgtagttctatttccttgatcattgtgaataat 10493008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 8584641 - 8584540
Alignment:
Q  198 agcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatc 297  Q
    |||||||||||  || |||||| |||||| ||||||||||||||| |||||||||||||| |||||||| ||| |||| |||| ||| ||||||||||||    
T  8584641 agcagcctgatccttagcagcaccaccaaccaacctttgatcatcggtaaaagcaacaaaggaaggtgtgattttattgccttcatcgttgtgaataatc 8584542  T
Q  298 tc 299  Q
    ||    
T  8584541 tc 8584540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 299
Target Start/End: Original strand, 8630197 - 8630326
Alignment:
Q  170 taccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaat 269  Q
    |||| ||||||||||||  ||||||    ||||||||||  || |||||| |||||| ||||||||||||||| ||||||||||| || |||||||| ||    
T  8630197 taccaaagacagtgttttgtgggttgatggcagcctgatccttagcagcaccaccaaccaacctttgatcatcggtaaaagcaacgaaggaaggtgtgat 8630296  T
Q  270 tctatttccttgatcattgtgaataatctc 299  Q
    | |||| |||| ||||||||||||||||||    
T  8630297 tttattgccttcatcattgtgaataatctc 8630326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 293
Target Start/End: Original strand, 8546639 - 8546767
Alignment:
Q  165 taaattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggt 264  Q
    ||||||||| || ||||||||  |||||||||||| |||||||||||| |||||||||||||||| ||||||   ||  || ||||||||| | ||||||    
T  8546639 taaattaccaaatacagtgttgattgggttagaagaagcctgatttttggcagcatcaccaatcagcctttgggaatttgtgaaagcaacacaagaaggt 8546738  T
Q  265 gtaattctatttccttgatcattgtgaat 293  Q
    ||  || | ||||||||||||||||||||    
T  8546739 gttgttttgtttccttgatcattgtgaat 8546767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 299
Target Start/End: Complemental strand, 8635639 - 8635503
Alignment:
Q  163 gataaattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaag 262  Q
    ||||| ||||| |||||||| || | ||||||||| | |||||| ||||| |||||||||||||||||||||||  | ||||| ||||||||| | ||||    
T  8635639 gataagttaccaaagacagtattggatgggttagaggaagcctggtttttggcagcatcaccaatcaacctttgtgcgtcagtgaaagcaacacaagaag 8635540  T
Q  263 gtgtaattctatttccttgatcattgtgaataatctc 299  Q
    |||| ||||| || ||||| |||||||| || |||||    
T  8635539 gtgtgattctgttcccttgctcattgtggatgatctc 8635503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 8655371 - 8655447
Alignment:
Q  223 ccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctc 299  Q
    |||||||||||||||| |||||| ||||||||||  ||||||||| ||||||| |||||||||||||||||||||||    
T  8655371 ccaatcaacctttgataatcagtgaaagcaacaacagaaggtgtagttctattgccttgatcattgtgaataatctc 8655447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 304
Target Start/End: Original strand, 8610632 - 8610767
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaa 268  Q
    ||||| ||||| ||||| | |||||| |||||||| |||||||| ||||||||||| ||||||||||||||| |||  ||||||||||| ||||| ||      
T  8610632 ttaccaaagactgtgttagctgggtttgaagcagcttgatttttagcagcatcacctatcaacctttgatcaccagagaaagcaacaaaagaaggagtgg 8610731  T
Q  269 ttctatttccttgatcattgtgaataatctctgctc 304  Q
    |||| |||||||| ||||| || || ||||| ||||    
T  8610732 ttctgtttccttgctcattatggattatctcagctc 8610767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 3148375 - 3148469
Alignment:
Q  205 tgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctc 299  Q
    ||||| || ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||  || | || ||||| |||||||||||||||||    
T  3148375 tgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatctc 3148469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 299
Target Start/End: Original strand, 8668433 - 8668563
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaa 268  Q
    ||||| |||| |||||||   ||||||| |||||  ||||| || |||||||| |||||||||||||| ||||   | ||||||||||| |||||||| |    
T  8668433 ttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcgccaatcaacctttgttcattgttgaaagcaacaaaagaaggtgtta 8668532  T
Q  269 ttctatttccttgatcattgtgaataatctc 299  Q
    |||  ||||||||||||||||||||||||||    
T  8668533 ttcggtttccttgatcattgtgaataatctc 8668563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 304
Target Start/End: Complemental strand, 29577122 - 29576988
Alignment:
Q  170 taccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaat 269  Q
    ||||||||| |||||| |||||||| || |||||||||||||| ||||||| |||||| |||||| |   |||||| ||||| ||||  ||||||||  |    
T  29577122 taccgaagatagtgttggttgggtttgaggcagcctgatttttagcagcattaccaattaaccttagtgaatcagtgaaagctacaacagaaggtgtggt 29577023  T
Q  270 tctatttccttgatcattgtgaataatctctgctc 304  Q
    |||||| |||||||||||||| || ||||| ||||    
T  29577022 tctattgccttgatcattgtggatgatctcagctc 29576988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 299
Target Start/End: Original strand, 8538770 - 8538902
Alignment:
Q  167 aattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgt 266  Q
    ||||||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||| | ||||  || | ||||| ||||| | ||||||||    
T  8538770 aattaccaaagacagtgtttgttgggttagaggaagcttgatttttggcagcatcaccaatcaatcgttgagaattactaaaaccaacacaagaaggtgt 8538869  T
Q  267 aattctatttccttgatcattgtgaataatctc 299  Q
      || | ||||||||||| ||||| || |||||    
T  8538870 ggttttgtttccttgatcgttgtgtatgatctc 8538902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 8660242 - 8660309
Alignment:
Q  199 gcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgt 266  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  8660242 gcagcctgattcttagcagcatcaccaatcaacctttgatcgtcagtgaaagcaacaaatgaaggtgt 8660309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 299
Target Start/End: Original strand, 17261390 - 17261490
Alignment:
Q  199 gcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatct 298  Q
    ||||| ||||| || || |||||||| |||||||||| ||| | || |||||||||||| ||||| |||||| | |||||||||||||||||||| ||||    
T  17261390 gcagcttgattcttagcggcatcaccgatcaacctttcatctttagcaaaagcaacaaaagaaggagtaattttgtttccttgatcattgtgaatgatct 17261489  T
Q  299 c 299  Q
    |    
T  17261490 c 17261490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 299
Target Start/End: Original strand, 6790378 - 6790508
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaa 268  Q
    |||||||||| |||||||   ||||| |  ||||| ||||  || ||||||||||| ||||||||||| ||||| || ||||||||||| ||||||||      
T  6790378 ttaccgaagatagtgttttgcgggttggtggcagcttgatacttagcagcatcaccgatcaacctttggtcatcggtgaaagcaacaaaagaaggtgtgg 6790477  T
Q  269 ttctatttccttgatcattgtgaataatctc 299  Q
    || | || ||||| |||||||||||||||||    
T  6790478 ttttgttaccttggtcattgtgaataatctc 6790508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 1302309 - 1302376
Alignment:
Q  199 gcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgt 266  Q
    ||||||||||| || ||||||||||| ||||||||||||||||| || ||||||||||| || |||||    
T  1302309 gcagcctgattcttagcagcatcaccgatcaacctttgatcatcggtgaaagcaacaaaagacggtgt 1302376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 8568804 - 8568903
Alignment:
Q  167 aattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgt 266  Q
    ||||||| |||  |||||| ||||| ||||||||||| |||||||| ||||||||||||||||| ||||||   | ||| ||||||||| | ||||||||    
T  8568804 aattaccaaaggtagtgttggttggattagaagcagcttgatttttggcagcatcaccaatcaatctttgagatttagtgaaagcaacacaagaaggtgt 8568903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 8577281 - 8577384
Alignment:
Q  193 ttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaa 292  Q
    |||| |||||| |||||||| |||||||| |||||||| ||||||  ||  |||||||||||| | ||||| ||  |||| ||||||||||||||||| |    
T  8577281 ttagtagcagcttgatttttggcagcatcgccaatcaatctttgagaattggtaaaagcaacacaagaaggagtggttctgtttccttgatcattgtgta 8577380  T
Q  293 taat 296  Q
    ||||    
T  8577381 taat 8577384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 304
Target Start/End: Complemental strand, 29581310 - 29581164
Alignment:
Q  158 aaaaagataaattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaa 257  Q
    ||||| || ||||||| |||| ||||||||||||||| |  |||||||||||||| ||||||| || |||||||||  |    ||||| ||||| ||||     
T  29581310 aaaaatatcaattaccaaagatagtgtttgttgggtttgcggcagcctgatttttagcagcattactaatcaacctcagtgagtcagtgaaagctacaac 29581211  T
Q  258 cgaaggtgtaattctatttccttgatcattgtgaataatctctgctc 304  Q
     ||||||||  ||| ||| |||||||||||||| || ||||| ||||    
T  29581210 agaaggtgtggttccattgccttgatcattgtggatgatctcagctc 29581164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 8382353 - 8382289
Alignment:
Q  180 agtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcag 244  Q
    |||||| ||||||||||| |||| |||||| || ||||||||||||| ||||||||||| |||||    
T  8382353 agtgttggttgggttagaggcagtctgattcttagcagcatcaccaaccaacctttgatgatcag 8382289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 8572556 - 8572679
Alignment:
Q  167 aattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgt 266  Q
    ||||||| |||| ||| || | ||| |||| |||||| |||||||| ||||||||||| ||||| ||||||  || ||||||||||||| | || || ||    
T  8572556 aattaccaaagatagtattggatggattagtagcagcttgatttttggcagcatcaccgatcaatctttgagaattagtaaaagcaacacaagagggagt 8572655  T
Q  267 aattctatttccttgatcattgtg 290  Q
      |||| |||||||| ||||||||    
T  8572656 tgttctgtttccttggtcattgtg 8572679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 8639844 - 8639789
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcacc 224  Q
    ||||| ||||||||||| || |||||||||| ||||||||| || |||||||||||    
T  8639844 ttaccaaagacagtgttggtagggttagaagaagcctgattcttagcagcatcacc 8639789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 27829458 - 27829349
Alignment:
Q  190 gggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgt 289  Q
    ||||| |||||||| || || || |||||||||||||||||||| || |  || || ||||||||| | ||||||||  |  | || ||||| |||||||    
T  27829458 gggttggaagcagcttggttcttagcagcatcaccaatcaacctctgtttgtccgtgaaagcaacacaagaaggtgttgtcttgttgccttgttcattgt 27829359  T
Q  290 gaataatctc 299  Q
    ||||||||||    
T  27829358 gaataatctc 27829349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 8104067 - 8104151
Alignment:
Q  203 cctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcatt 287  Q
    ||||||| || ||||||||||| |||||||||| |  |||||| ||||||||| | || |||||  |||| || |||||||||||    
T  8104067 cctgattcttagcagcatcaccgatcaacctttcactatcagtgaaagcaacataagacggtgtcgttctgttcccttgatcatt 8104151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 15596072 - 15596157
Alignment:
Q  214 gcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctc 299  Q
    |||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||| |||||||| |||||||| ||||||||    
T  15596072 gcagcatcaccaatcaacctttgatcattagtgaaagaaacaaaagaaggtgtaattctgtttccttggtcattgtggataatctc 15596157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 299
Target Start/End: Complemental strand, 4677638 - 4677544
Alignment:
Q  205 tgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctc 299  Q
    ||||| || ||||||| |||||||||||||||||||||||||||||||||||| ||||||||  || | || ||||| ||||||| |||||||||    
T  4677638 tgattcttagcagcattaccaatcaacctttgatcatcagtaaaagcaacaaaagaaggtgttgttttgttgccttgttcattgtaaataatctc 4677544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 300
Target Start/End: Complemental strand, 34465385 - 34465251
Alignment:
Q  166 aaattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtg 265  Q
    |||||||| || ||||||||   |||||| | |||||  ||||| || ||||||| ||| ||||| |||||||||| ||||||||||||||| |||||||    
T  34465385 aaattaccaaaaacagtgttctgtgggttggtagcagtttgattcttagcagcattaccgatcaatctttgatcatgagtaaaagcaacaaaagaaggtg 34465286  T
Q  266 taattctatttccttgatcattgtgaataatctct 300  Q
    |  || | || ||||| ||||||| ||||||||||    
T  34465285 tggttgtgttaccttggtcattgtcaataatctct 34465251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 9323198 - 9323068
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaa 268  Q
    ||||| |||| |||||||   ||||||| |||||  ||||| || ||||||||||||||||||||||| ||||   | ||||||||||| ||||||||      
T  9323198 ttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcaccaatcaacctttgctcattgttgaaagcaacaaaagaaggtgttg 9323099  T
Q  269 ttctatttccttgatcattgtgaataatctc 299  Q
    |||  ||||||||||||||||||||||||||    
T  9323098 ttcggtttccttgatcattgtgaataatctc 9323068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 9377677 - 9377547
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaa 268  Q
    ||||| |||| |||||||   ||||||| |||||  ||||| || ||||||||||||||||||||||| ||||   | ||||||||||| ||||||||      
T  9377677 ttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcaccaatcaacctttgctcattgttgaaagcaacaaaagaaggtgttg 9377578  T
Q  269 ttctatttccttgatcattgtgaataatctc 299  Q
    |||  ||||||||||||||||||||||||||    
T  9377577 ttcggtttccttgatcattgtgaataatctc 9377547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 9335169 - 9335040
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaa 268  Q
    ||||| |||| |||||||   ||||||| |||||  ||||| || |||||||||||| |||||||||| ||||   | ||||||||||| ||||||||      
T  9335169 ttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcacca-tcaacctttgctcattgttgaaagcaacaaaagaaggtgttg 9335071  T
Q  269 ttctatttccttgatcattgtgaataatctc 299  Q
    |||  ||||||||||||||||||||||||||    
T  9335070 ttcggtttccttgatcattgtgaataatctc 9335040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 23586656 - 23586538
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaa 268  Q
    |||||||| |||||||| || |||||   |||| ||||||| || ||||||||||| ||||| | ||    |||||| ||||||||| | |||||||||     
T  23586656 ttaccgaaaacagtgttagtagggttcatagcaacctgattcttagcagcatcaccgatcaaacgttctgtatcagtgaaagcaacataagaaggtgtag 23586557  T
Q  269 ttctatttccttgatcatt 287  Q
    ||||||| || ||||||||    
T  23586556 ttctattaccctgatcatt 23586538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 30776085 - 30776182
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgt 266  Q
    ||||| ||||||||||||   |||||   ||||||||| |  || |||||| |||| | |||||||||| ||||||| ||||||||||| ||||||||    
T  30776085 ttaccaaagacagtgttttgagggttgatagcagcctggtccttagcagcagcaccgaccaacctttgaccatcagtgaaagcaacaaaagaaggtgt 30776182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 35133451 - 35133519
Alignment:
Q  198 agcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgt 266  Q
    |||||| ||||| || ||||||||||| |||||||||||||| | ||| ||||||| | | ||||||||    
T  35133451 agcagcttgattcttagcagcatcaccgatcaacctttgatccttagtgaaagcaatacaagaaggtgt 35133519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 304
Target Start/End: Complemental strand, 12258019 - 12257913
Alignment:
Q  198 agcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatc 297  Q
    |||||| ||||| || |||||||||||||||||||||||||| | ||||||||||||| | ||||| ||  |||| ||||||||||| |||||||| |||    
T  12258019 agcagcttgattcttagcagcatcaccaatcaacctttgatctttagtaaaagcaacacaagaaggcgttgttctgtttccttgatcgttgtgaatgatc 12257920  T
Q  298 tctgctc 304  Q
    || ||||    
T  12257919 tcagctc 12257913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 299
Target Start/End: Original strand, 12235763 - 12235896
Alignment:
Q  166 aaattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtg 265  Q
    |||||||| ||||| ||||||   ||||| |||||||| ||||| || |||||||||||||||||||| ||||  || || ||||||||||| ||||| |    
T  12235763 aaattaccaaagacggtgttttgcgggttggaagcagcttgattcttagcagcatcaccaatcaacctctgattttcggtgaaagcaacaaaagaagggg 12235862  T
Q  266 taattctatttccttgatcattgtgaataatctc 299  Q
    |  ||||||| |||||||| |||||||| |||||    
T  12235863 ttgttctattgccttgatcgttgtgaatgatctc 12235896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 12244537 - 12244413
Alignment:
Q  169 ttaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaa 268  Q
    ||||| ||||||||||||   | ||||| |||||| |||||||| |||||||||||||| ||||||||||| ||||| ||||||||| | ||||||||      
T  12244537 ttaccaaagacagtgttttgagagttagcagcagcttgatttttagcagcatcaccaataaacctttgatcttcagtgaaagcaacacaagaaggtgttg 12244438  T
Q  269 ttctatttccttgatcattgtgaat 293  Q
    |||| || || ||||| ||||||||    
T  12244437 ttctgttgccctgatcgttgtgaat 12244413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 304
Target Start/End: Complemental strand, 16656698 - 16656599
Alignment:
Q  205 tgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctctgctc 304  Q
    ||||| || ||||||||||| |||||||||||||||| ||| ||||||||||| ||||||||  |||| ||||| || |||||||| || ||||||||||    
T  16656698 tgattcttagcagcatcaccgatcaacctttgatcatgagtgaaagcaacaaaagaaggtgttgttctgtttccctggtcattgtgtatgatctctgctc 16656599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 300
Target Start/End: Original strand, 43626333 - 43626419
Alignment:
Q  214 gcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctct 300  Q
    ||||||||||||||||||||||| || | ||| |||| |||||| ||||||||| |||| |||||||| |||||||| |||||||||    
T  43626333 gcagcatcaccaatcaacctttggtccttagtgaaagaaacaaaagaaggtgtagttctgtttccttggtcattgtggataatctct 43626419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 16661155 - 16661070
Alignment:
Q  214 gcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctc 299  Q
    |||||| |||| | |||||||||| ||||||||||||||||||| |||||||||||| | || |||| ||| ||||| ||||||||    
T  16661155 gcagcaccaccgaccaacctttgagcatcagtaaaagcaacaaaagaaggtgtaattttgttgccttcatcgttgtggataatctc 16661070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 14705432 - 14705555
Alignment:
Q  170 taccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaat 269  Q
    |||| ||||||||||||   ||||| | |||||| ||||| || |||||||||||||||||||  ||||  || || ||||||||||| ||||| ||  |    
T  14705432 taccaaagacagtgtttcgagggttggcagcagcttgattcttagcagcatcaccaatcaaccgctgattttcggtgaaagcaacaaaagaaggagttgt 14705531  T
Q  270 tctatttccttgatcattgtgaat 293  Q
    |||||| |||||||| ||||||||    
T  14705532 tctattgccttgatcgttgtgaat 14705555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 293
Target Start/End: Original strand, 7543242 - 7543369
Alignment:
Q  166 aaattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtg 265  Q
    |||||||| ||||||||||||   ||||| |||||||| ||||| || |||  |||||| |||||||| ||||  || || ||||||||||| |||||||    
T  7543242 aaattaccaaagacagtgttttgagggttggaagcagcttgattcttagcattatcaccgatcaacctctgattttcggtgaaagcaacaaaagaaggtg 7543341  T
Q  266 taattctatttccttgatcattgtgaat 293  Q
    |  |||| || ||||| || ||||||||    
T  7543342 ttgttctgttgccttggtcgttgtgaat 7543369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 12000340 - 12000425
Alignment:
Q  208 ttttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaat 293  Q
    ||||| |||||||||||||  ||||||||||  ||||| ||||||||| | |||||||| ||| | || |||||||| ||||||||    
T  12000340 tttttagcagcatcaccaacaaacctttgattttcagtgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaat 12000425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 42554276 - 42554191
Alignment:
Q  214 gcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctc 299  Q
    |||||||||||||||||||||| || || ||||||||||||||| ||||||||  || | || |||||||||||||||||||||||    
T  42554276 gcagcatcaccaatcaacctttcatgatgagtaaaagcaacaaaagaaggtgttgttttgttgccttgatcattgtgaataatctc 42554191  T

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Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 28220951 - 28221045
Alignment:
Q  205 tgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctc 299  Q
    |||||||| |||||||| ||||||||||||| |||||| || ||||||||||| ||||| ||  || | || |||||||||||||||||||||||    
T  28220951 tgatttttagcagcatcgccaatcaacctttcatcatcggtgaaagcaacaaaagaaggagttgttttgttgccttgatcattgtgaataatctc 28221045  T

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Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 167 - 293
Target Start/End: Original strand, 12529834 - 12529960
Alignment:
Q  167 aattaccgaagacagtgtttgttgggttagaagcagcctgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgt 266  Q
    ||||||| |||| |||||| || |||||||| | ||| |||||||| ||||||| ||||||||| || |||  || ||||||||||||| | ||||||||    
T  12529834 aattaccaaagatagtgttggtggggttagaggaagcttgatttttggcagcatgaccaatcaatctctgagaattagtaaaagcaacacaagaaggtgt 12529933  T
Q  267 aattctatttccttgatcattgtgaat 293  Q
      || | ||||||||||||||||||||    
T  12529934 tgttttgtttccttgatcattgtgaat 12529960  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 43745828 - 43745919
Alignment:
Q  205 tgattttttgcagcatcaccaatcaacctttgatcatcagtaaaagcaacaaacgaaggtgtaattctatttccttgatcattgtgaataatctc 299  Q
    ||||| || ||||| ||||| |||||||||| || |||||||||||||||||| |||| ||   || | || |||||||||||||||||||||||    
T  43745828 tgattcttagcagcgtcacctatcaacctttcatgatcagtaaaagcaacaaaagaagttg---ttttgttgccttgatcattgtgaataatctc 43745919  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 28911312 - 28911355
Alignment:
Q  199 gcagcctgattttttgcagcatcaccaatcaacctttgatcatc 242  Q
    ||||||||||| || |||||||||||||||||||||||||||||    
T  28911312 gcagcctgattcttagcagcatcaccaatcaacctttgatcatc 28911355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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