View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21616_low_19 (Length: 261)
Name: NF21616_low_19
Description: NF21616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21616_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 36338820 - 36339054
Alignment:
| Q |
11 |
aaaatcaattagtgccttagtatgcgaaatcaatgaactagttatatttaaaacacaattagtgccgaagaagagctttaacaatttgctggtttttaaa |
110 |
Q |
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| T |
36338820 |
aaaatcaattagtgccttagtatgcgaaatcaatgaactagttatatttaaaacacaattagtgccgaagaagagctttaacaatttgctggtttttaaa |
36338919 |
T |
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| Q |
111 |
aacattttgcaaaacaatgtctaatttgttgaatttgtgtataggctcaaaattgtatgcttcaatgatttaggagcagcatgaaatgctcgaagagtta |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
36338920 |
aacattttgcaaaacaatgtctaatttgttgaatttgtgtataggctcaaaattgtatgcttcaatgatttaggagcaacatgaaatgctcgaagagtta |
36339019 |
T |
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| Q |
211 |
tcaagtctatttgttaatatcgaatagttcacgtg |
245 |
Q |
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| T |
36339020 |
tcaagtctatttgttaatatcgaatagttcacgtg |
36339054 |
T |
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