View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21616_low_2 (Length: 702)
Name: NF21616_low_2
Description: NF21616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21616_low_2 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 675; Significance: 0; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 675; E-Value: 0
Query Start/End: Original strand, 1 - 691
Target Start/End: Complemental strand, 47528583 - 47527893
Alignment:
| Q |
1 |
acgtgaactcatagcttccctttgacattccaacaacgaccttccatcttccaagaagataccagtggatgatgtaggtcttgtacaaccagcatgatcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47528583 |
acgtgaactcatagcttccctttgacattccaacaacgaccttccatcttccaagaagataccagtggatgatgtaggtcttgtacaaccagcatgatcc |
47528484 |
T |
 |
| Q |
101 |
ttaaatccagcgagagtgaaattaacattacaacaatcacaaacaataccatcacaatatatactcccgcttgtaacaacattgttactaccacgacaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47528483 |
ttaaatccagcgagagtgaaattaacattacaacaatcacaaacaataccatcacaatatatactcccgcttgtaacaacattgttactaccacgacaga |
47528384 |
T |
 |
| Q |
201 |
gcacattagtccctgaaaccaaaactttattctttatcaaccaagaaacaagtgaatacctttcccttataccttctctctttaataccttccctctttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47528383 |
gcacattagtccctgaaaccaaaactttattctttatcaaccaagaaacaagtgaatacctttcccttataccttctctctttaataccttccctctttt |
47528284 |
T |
 |
| Q |
301 |
accactacccaccgaattagtaacttctggtttagattgaatcacatgcttctcattttccgttgatgttgataatgtagtaaccgtggcttttttaaca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47528283 |
accactacccaccgaattagtaacttctggtttagattgaatcacatgcttctcattttccgttgatgttgataatgtagtaaccgtggcttttttaaca |
47528184 |
T |
 |
| Q |
401 |
gaaatgaaactagaggcttcagaatcctcattagaagtaaattcaaaggatttcaaagacattgctattgctgctgcttcctcggattcatttggttgct |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47528183 |
gaaatgaaactagaggcttcagaatcctcattagaagtaaattcaaaggatttcaaagacattgctattgctgctgcttcctcggattcatttggttgct |
47528084 |
T |
 |
| Q |
501 |
ttttcgacagtaatggagacagagaaattgtttttgatgctgcttcatcagattctctccattgctcttttatctgtaatggaaacgaataaattaatgt |
600 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47528083 |
ttttcggctgtaatggagacagagaaattgtttttgatgctgcttcatcagattctctccattgctcttttatctgtaatggaaacgaataaattaatgt |
47527984 |
T |
 |
| Q |
601 |
tgctgctgcttccttgcattctcgcagtcgctctttcgactgtaatggagacaagtaaaatgctcttactactgcttcctcagattctctc |
691 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
47527983 |
tgctgctgcttcctcgcattctcgcagtcgctctttcgactgtaatggagacaagtaaaatgctcttactaatgcttcctcagattctctc |
47527893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 47523073 - 47522772
Alignment:
| Q |
1 |
acgtgaactcatagcttccctttgacattccaacaacgaccttccatcttccaagaagataccagtggatgatgtaggtcttgtacaaccagcatgatcc |
100 |
Q |
| |
|
||||||||| | ||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||| || | || |||||||||||||||||||| || |
|
|
| T |
47523073 |
acgtgaactaagagcttccctttgacagtccaacaacgaccttccatctcccaacaagatactagtggttggtctatgtcttgtacaaccagcatgagcc |
47522974 |
T |
 |
| Q |
101 |
ttaaatccagcgagagtgaaattaacattacaacaatcacaaacaataccatcacaatatatactcccgcttgtaacaacattgttactaccacgacaga |
200 |
Q |
| |
|
| |||||||| || | ||||||||||| ||||||||||||||| || |||||| || ||| || ||| ||| | ||||||||||| ||||||||||||| |
|
|
| T |
47522973 |
tcaaatccagtgacattgaaattaacacgacaacaatcacaaactatgccatcagaaaataaaccccctcttttgacaacattgtttctaccacgacaga |
47522874 |
T |
 |
| Q |
201 |
gcacattagtccctgaaaccaaaactttattctttatcaaccaagaaacaagtgaatacctttcccttataccttctctctttaataccttccctctttt |
300 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||| ||||| ||||||||||||| || |
|
|
| T |
47522873 |
atacattagtccctgaaaccaaaacttgattctttatcaaccaagaaactagtgaatacctttctcttttaccttccgtctttgataccttccctctctt |
47522774 |
T |
 |
| Q |
301 |
ac |
302 |
Q |
| |
|
|| |
|
|
| T |
47522773 |
ac |
47522772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 266 - 373
Target Start/End: Complemental strand, 47550002 - 47549895
Alignment:
| Q |
266 |
cttataccttctctctttaataccttccctcttttaccactacccaccgaattagtaacttctggtttagattgaatcacatgcttctcattttccgttg |
365 |
Q |
| |
|
||||||||||| ||||||| ||| |||||||||||||||||| |||| ||||||| |||||||| || ||||||| ||||||| |||||||||||| ||| |
|
|
| T |
47550002 |
cttataccttccctctttagtactttccctcttttaccactatccactgaattagaaacttctgattcagattgactcacatgtttctcattttcctttg |
47549903 |
T |
 |
| Q |
366 |
atgttgat |
373 |
Q |
| |
|
| |||||| |
|
|
| T |
47549902 |
aagttgat |
47549895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 409 - 691
Target Start/End: Complemental strand, 47522506 - 47522230
Alignment:
| Q |
409 |
actagaggcttcagaatcctcattagaagtaaattcaaaggatttcaaagacattgctattgctgctgcttcctcggattcatttggttgctttttcgac |
508 |
Q |
| |
|
|||||||||||||||||| |||| |||||| ||||| |||| |||| |||| ||||||||||||||||||||||||| | ||| ||||| |
|
|
| T |
47522506 |
actagaggcttcagaatcgtcatcagaagttgattcatctgattcagaagaaattgatattgctgctgcttcctcggattcactcggtcgcttt------ |
47522413 |
T |
 |
| Q |
509 |
agtaatggagacagagaaattgtttttgatgctgcttcatca---gattctctccattgctcttttatctgtaatggaaacgaataaattaatgttgctg |
605 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||||||| || ||||||||| || |||||| | | |||||| || |||| ||| ||||||||| |
|
|
| T |
47522412 |
---aatggagacaaagaaattgtagttgctgctgcttcctcctcggattctctcagtttctctttcgacggcaatggagaccaatagattgatgttgctg |
47522316 |
T |
 |
| Q |
606 |
ctgcttccttgcattctcgcagtcgctctttcgactgtaatggagacaagtaaaatgctcttactactgcttcctcagattctctc |
691 |
Q |
| |
|
||||||||| | |||||| | || |||||||||| ||||| |||||| | |||| || | || || ||| |||||||||||||||| |
|
|
| T |
47522315 |
ctgcttcctgggattctctcggtagctctttcgattgtaaaggagacgaataaattgatattgctgctgtttcctcagattctctc |
47522230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 687
Target Start/End: Complemental strand, 47527911 - 47527765
Alignment:
| Q |
541 |
tgcttcatcagattctctccattgctcttttatctgtaatggaaacgaataaattaatgttgctgctgcttccttgcattctcgcagtcgctctttcgac |
640 |
Q |
| |
|
|||||| |||||||||||| ||||||||| | |||||||||| ||||| ||||| ||||||||||||||| | || ||| ||||||||| ||||| |
|
|
| T |
47527911 |
tgcttcctcagattctctcggttgctctttcaactgtaatggagacgaagaaattgttgttgctgctgcttcatcagatgctctcagtcgctcaatcgac |
47527812 |
T |
 |
| Q |
641 |
tgtaatggagacaagtaaaatgctcttactactgcttcctcagattc |
687 |
Q |
| |
|
|| ||||||||||| ||||| ||||| |||||| | |||| ||||| |
|
|
| T |
47527811 |
tgaaatggagacaaagaaaatcctcttgctactgatacctcggattc |
47527765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 574 - 654
Target Start/End: Complemental strand, 47527746 - 47527666
Alignment:
| Q |
574 |
ctgtaatggaaacgaataaattaatgttgctgctgcttccttgcattctcgcagtcgctctttcgactgtaatggagacaa |
654 |
Q |
| |
|
|||||||||| | ||||| ||| || ||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
47527746 |
ctgtaatggagatgaatatattgatattgctgctgcttcctcagattctctcagtcgctctttcgactgtaatggagacaa |
47527666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 371
Target Start/End: Complemental strand, 47522679 - 47522589
Alignment:
| Q |
281 |
tttaataccttccctcttttaccactacccaccgaattagtaacttctggtttagattgaatcacatgcttctcattttccgttgatgttg |
371 |
Q |
| |
|
||||| ||||| ||||||||| ||||||| ||||||| | ||| ||||| || | ||| | |||||||||||||||||||| ||||||||| |
|
|
| T |
47522679 |
tttaaaacctttcctcttttatcactacctaccgaatcattaagttctgattcaaatttactcacatgcttctcattttccattgatgttg |
47522589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 475 - 559
Target Start/End: Complemental strand, 47527911 - 47527827
Alignment:
| Q |
475 |
tgcttcctcggattcatttggttgctttttcgacagtaatggagacagagaaattgtttttgatgctgcttcatcagattctctc |
559 |
Q |
| |
|
||||||||| ||||| | ||||||| |||| || ||||||||||| |||||||||| ||| |||||||||||||||| ||||| |
|
|
| T |
47527911 |
tgcttcctcagattctctcggttgctctttcaactgtaatggagacgaagaaattgttgttgctgctgcttcatcagatgctctc |
47527827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 461 - 544
Target Start/End: Complemental strand, 47527727 - 47527644
Alignment:
| Q |
461 |
attgctattgctgctgcttcctcggattcatttggttgctttttcgacagtaatggagacagagaaattgtttttgatgctgct |
544 |
Q |
| |
|
|||| |||||||||||||||||| ||||| | || ||| ||||||| |||||||||||| |||||||||| ||| ||||||| |
|
|
| T |
47527727 |
attgatattgctgctgcttcctcagattctctcagtcgctctttcgactgtaatggagacaaagaaattgttgttgttgctgct |
47527644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 532
Target Start/End: Complemental strand, 47522262 - 47522191
Alignment:
| Q |
461 |
attgctattgctgctgcttcctcggattcatttggttgctttttcgacagtaatggagacagagaaattgtt |
532 |
Q |
| |
|
|||| ||||||||||| |||||| ||||| | ||| |||||||||| | ||||||||||||||||||||| |
|
|
| T |
47522262 |
attgatattgctgctgtttcctcagattctctcggtctctttttcgactgcaatggagacagagaaattgtt |
47522191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 652
Target Start/End: Complemental strand, 47527716 - 47527599
Alignment:
| Q |
538 |
tgctgcttcatcagattctctccattgctcttttatctgtaatggaaacgaataaa---ttaatgttgctgctgcttccttgcattctcgcagtcgctct |
634 |
Q |
| |
|
||||||||| |||||||||||| | ||||||| |||||||||| || || ||| || |||||||||||||||| | |||||| |||| |||| |
|
|
| T |
47527716 |
tgctgcttcctcagattctctcagtcgctctttcgactgtaatggagacaaagaaattgttgttgttgctgctgcttccacggattctctcagttgctca |
47527617 |
T |
 |
| Q |
635 |
ttcgactgtaatggagac |
652 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
47527616 |
ttcgactgtaatggagac |
47527599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 135; Significance: 5e-70; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 14 - 304
Target Start/End: Original strand, 44871219 - 44871509
Alignment:
| Q |
14 |
gcttccctttgacattccaacaacgaccttccatcttccaagaagataccagtggatgatgtaggtcttgtacaaccagcatgatccttaaatccagcga |
113 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| |||||||| ||||||| | |||||| | | |||||||||||||||||||| ||| ||||||| || |
|
|
| T |
44871219 |
gcttccctttgacatttaaacaatgaccttccgtcttccaacaagatactaatggatggtctgtgtcttgtacaaccagcatgagcctcaaatccactga |
44871318 |
T |
 |
| Q |
114 |
gagtgaaattaacattacaacaatcacaaacaataccatcacaatatatactcccgcttgtaacaacattgttactaccacgacagagcacattagtccc |
213 |
Q |
| |
|
|||||||||||| |||||| | |||||| ||||||||| || |||||||||| ||| | |||| ||| | |||||||||||||| ||||| ||| || |
|
|
| T |
44871319 |
cggtgaaattaacacgacaacagttacaaactataccatcagaaaatatactccctcttttgacaatattttcactaccacgacagaacacatgagttcc |
44871418 |
T |
 |
| Q |
214 |
tgaaaccaaaactttattctttatcaaccaagaaacaagtgaatacctttcccttataccttctctctttaataccttccctcttttacca |
304 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
44871419 |
tgaaaccaaaactttattctctatcaaccaagaaacaatggaataactttcccttatacctcccctctttaataccttccctcttttacca |
44871509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 297 - 438
Target Start/End: Original strand, 44871616 - 44871757
Alignment:
| Q |
297 |
ttttaccactacccaccgaattagtaacttctggtttagattgaatcacatgcttctcattttccgttgatgttgataatgtagtaaccgtggctttttt |
396 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||||||||| ||| |||||||| |||||||||| |||||||| |
|
|
| T |
44871616 |
ttttaccactacccaccgaatttgtaacttctggttcagattgactcacatgattctcattttccattgttgttgataccatagtaaccgtagctttttt |
44871715 |
T |
 |
| Q |
397 |
aacagaaatgaaactagaggcttcagaatcctcattagaagt |
438 |
Q |
| |
|
||||||| || ||| ||||| |||||||||||||| |||||| |
|
|
| T |
44871716 |
aacagaactggaacaagaggtttcagaatcctcatcagaagt |
44871757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 691
Target Start/End: Original strand, 44871849 - 44871992
Alignment:
| Q |
548 |
tcagattctctccattgctcttttatctgtaatggaaacgaataaattaatgttgctgctgcttccttgcattctcgcagtcgctctttcgactgtaatg |
647 |
Q |
| |
|
||||||||||| ||||||||| | |||||| || | ||||||||| ||| ||||||| |||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
44871849 |
tcagattctctgggttgctctttcaaatgtaattgagaagaataaattgatgctgctgcttcttccttggattctttcagtctctctttcgactgtaatg |
44871948 |
T |
 |
| Q |
648 |
gagacaagtaaaatgctcttactactgcttcctcagattctctc |
691 |
Q |
| |
|
||||||| |||||||||| ||||||||||||| ||||||||| |
|
|
| T |
44871949 |
gagacaaagaaaatgctctagctactgcttcctcggattctctc |
44871992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 474 - 693
Target Start/End: Original strand, 44871973 - 44872195
Alignment:
| Q |
474 |
ctgcttcctcggattcatttggttgctttttcgacagtaatggagacagagaaattg---tttttgatgctgcttcatcagattctctccattgctcttt |
570 |
Q |
| |
|
|||||||||||||||| | |||||| |||| || |||||||||| |||||||| || ||| ||||||||| || |||| |||| ||||||||| |
|
|
| T |
44871973 |
ctgcttcctcggattctctcggttgcactttcaactgtaatggagaagaagaaattgctgttgttgttgctgcttcctcggattttctcagttgctcttt |
44872072 |
T |
 |
| Q |
571 |
tatctgtaatggaaacgaataaattaatgttgctgctgcttccttgcattctcgcagtcgctctttcgactgtaatggagacaagtaaaatgctcttact |
670 |
Q |
| |
|
|||||| ||| | |||||||| |||||||||||| ||||| | |||||| | ||||||| ||||||||||||| |||||| |||||||||| || |
|
|
| T |
44872073 |
cgactgtaaaggaggcaaataaattgatgttgctgctgtttcctcggattctcccggtcgctccttcgactgtaatgcagacaaagtaaatgctcttgct |
44872172 |
T |
 |
| Q |
671 |
actgcttcctcagattctctctg |
693 |
Q |
| |
|
|||||||||| |||| |||||| |
|
|
| T |
44872173 |
actgcttccttggattttctctg |
44872195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 689
Target Start/End: Original strand, 44871902 - 44872125
Alignment:
| Q |
469 |
tgctgctgcttcctcggattcatttggttgctttttcgacagtaatggagacagagaaattgtttttgatgctgcttcatcagattctctccattgctct |
568 |
Q |
| |
|
||||||| |||||| |||||| || || || ||||||| |||||||||||| ||||| || | | | | ||||||| || ||||||||| |||| || |
|
|
| T |
44871902 |
tgctgcttcttccttggattctttcagtctctctttcgactgtaatggagacaaagaaaatgctctagctactgcttcctcggattctctcggttgcact |
44872001 |
T |
 |
| Q |
569 |
tttatctgtaatggaaacgaataaat---taatgttgctgctgcttccttgcattctcgcagtcgctctttcgactgtaatggagacaagtaaaatgctc |
665 |
Q |
| |
|
|| | |||||||||| | ||| |||| | ||||| ||||||||||| | ||| || |||| |||||||||||||||| |||| ||| |||| || | |
|
|
| T |
44872002 |
ttcaactgtaatggagaagaagaaattgctgttgttgttgctgcttcctcggattttctcagttgctctttcgactgtaaaggaggcaaataaattgatg |
44872101 |
T |
 |
| Q |
666 |
ttactactgcttcctcagattctc |
689 |
Q |
| |
|
|| || ||| |||||| ||||||| |
|
|
| T |
44872102 |
ttgctgctgtttcctcggattctc |
44872125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 103; Significance: 7e-51; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 5 - 251
Target Start/End: Original strand, 9820402 - 9820648
Alignment:
| Q |
5 |
gaactcatagcttccctttgacattccaacaacgaccttccatcttccaagaagataccagtggatgatgtaggtcttgtacaaccagcatgatccttaa |
104 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||| |||||||| | || |||||||||||||||||||| || | |
|
|
| T |
9820402 |
gaactcagagcttccctttgacaatccaacaacgatcttccatcttccaacaagatactagtggatggtctatgtcttgtacaaccagcatgagactcga |
9820501 |
T |
 |
| Q |
105 |
atccagcgagagtgaaattaacattacaacaatcacaaacaataccatcacaatatatactcccgcttgtaacaacattgttactaccacgacagagcac |
204 |
Q |
| |
|
| || | || ||| || |||||| ||||||||||||||| ||| ||||| || | | ||| || ||| | ||||| |||||||| || |||||| ||| |
|
|
| T |
9820502 |
acccggtgatagtaaaggtaacatgacaacaatcacaaactatagcatcagaaaacaaacttcctcttttgacaactttgttactgccctgacagaacac |
9820601 |
T |
 |
| Q |
205 |
attagtccctgaaaccaaaactttattctttatcaaccaagaaacaa |
251 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9820602 |
attagtccctgaaaccaaaacttgattctttatcaaccaagaaacaa |
9820648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 5 - 251
Target Start/End: Complemental strand, 9853578 - 9853332
Alignment:
| Q |
5 |
gaactcatagcttccctttgacattccaacaacgaccttccatcttccaagaagataccagtggatgatgtaggtcttgtacaaccagcatgatccttaa |
104 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||| |||||||| | || |||||||||||||||||||| || | |
|
|
| T |
9853578 |
gaactcagagcttccctttgacaatccaacaacgatcttccatcttccaacaagatactagtggatggtctatgtcttgtacaaccagcatgagactcga |
9853479 |
T |
 |
| Q |
105 |
atccagcgagagtgaaattaacattacaacaatcacaaacaataccatcacaatatatactcccgcttgtaacaacattgttactaccacgacagagcac |
204 |
Q |
| |
|
| || | || ||| || |||||| ||||||||||||||| ||| ||||| || | | ||| || ||| | ||||| |||||||| || |||||| ||| |
|
|
| T |
9853478 |
acccggtgatagtaaaggtaacatgacaacaatcacaaactatagcatcagaaaacaaacttcctcttttgacaactttgttactgccctgacagaacac |
9853379 |
T |
 |
| Q |
205 |
attagtccctgaaaccaaaactttattctttatcaaccaagaaacaa |
251 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9853378 |
attagtccctgaaaccaaaacttgattctttatcaaccaagaaacaa |
9853332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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