View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21616_low_20 (Length: 253)

Name: NF21616_low_20
Description: NF21616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21616_low_20
NF21616_low_20
[»] chr1 (63 HSPs)
chr1 (15-253)||(2926463-2926696)
chr1 (15-197)||(22079322-22079504)
chr1 (34-219)||(9109419-9109604)
chr1 (18-197)||(47255325-47255503)
chr1 (15-176)||(6808479-6808639)
chr1 (43-191)||(47115183-47115331)
chr1 (41-189)||(20762686-20762833)
chr1 (58-191)||(13316376-13316508)
chr1 (34-155)||(37282692-37282812)
chr1 (22-155)||(50167165-50167295)
chr1 (52-197)||(13938143-13938287)
chr1 (18-98)||(28242408-28242487)
chr1 (58-197)||(31659243-31659382)
chr1 (58-183)||(4552661-4552785)
chr1 (58-191)||(11348710-11348842)
chr1 (58-155)||(19754543-19754639)
chr1 (58-155)||(28220250-28220346)
chr1 (18-155)||(31925693-31925827)
chr1 (58-197)||(37168302-37168442)
chr1 (18-155)||(42297959-42298095)
chr1 (22-155)||(49918398-49918528)
chr1 (58-197)||(834191-834330)
chr1 (58-197)||(8550811-8550950)
chr1 (58-197)||(13547113-13547252)
chr1 (58-197)||(13549024-13549163)
chr1 (43-197)||(37033081-37033236)
chr1 (53-199)||(41135824-41135968)
chr1 (58-155)||(3156913-3157009)
chr1 (60-105)||(13659362-13659407)
chr1 (58-155)||(28223445-28223541)
chr1 (58-155)||(28265578-28265674)
chr1 (74-197)||(30476486-30476609)
chr1 (58-98)||(46065022-46065062)
chr1 (22-197)||(50169200-50169373)
chr1 (41-155)||(7482238-7482351)
chr1 (58-105)||(44455257-44455304)
chr1 (16-78)||(12318506-12318568)
chr1 (57-155)||(13137999-13138096)
chr1 (28-197)||(29136252-29136421)
chr1 (73-197)||(16455627-16455750)
chr1 (20-61)||(25652225-25652266)
chr1 (43-155)||(2262983-2263095)
chr1 (58-105)||(1833619-1833666)
chr1 (58-105)||(3189427-3189474)
chr1 (58-105)||(3198244-3198291)
chr1 (58-105)||(3207083-3207130)
chr1 (78-192)||(3460706-3460821)
chr1 (71-155)||(10925271-10925357)
chr1 (32-155)||(19752734-19752855)
chr1 (41-238)||(34603541-34603737)
chr1 (58-105)||(36683777-36683824)
chr1 (66-105)||(37503589-37503628)
chr1 (58-105)||(45644378-45644425)
chr1 (32-197)||(41360919-41361083)
chr1 (36-154)||(44650165-44650282)
chr1 (74-155)||(193659-193739)
chr1 (22-190)||(196897-197063)
chr1 (28-105)||(5460003-5460080)
chr1 (61-98)||(8871089-8871126)
chr1 (84-153)||(32471510-32471579)
chr1 (71-183)||(37559905-37560017)
chr1 (22-98)||(40122186-40122260)
chr1 (61-105)||(51765494-51765538)
[»] chr5 (43 HSPs)
chr5 (16-188)||(316777-316948)
chr5 (53-194)||(3325922-3326063)
chr5 (58-197)||(25412766-25412904)
chr5 (17-183)||(10054799-10054964)
chr5 (16-196)||(10700632-10700809)
chr5 (28-155)||(28278364-28278489)
chr5 (28-197)||(16452085-16452253)
chr5 (21-183)||(33906017-33906179)
chr5 (22-191)||(30182600-30182767)
chr5 (58-155)||(37439189-37439285)
chr5 (58-197)||(213470-213609)
chr5 (58-197)||(13239756-13239895)
chr5 (58-197)||(33831685-33831824)
chr5 (43-189)||(13343075-13343219)
chr5 (43-98)||(27637622-27637677)
chr5 (58-155)||(30682946-30683044)
chr5 (22-197)||(16409480-16409656)
chr5 (58-197)||(28750679-28750818)
chr5 (22-189)||(36074032-36074196)
chr5 (66-197)||(38747010-38747141)
chr5 (58-197)||(40147266-40147405)
chr5 (43-98)||(4160703-4160758)
chr5 (58-196)||(13488209-13488347)
chr5 (22-155)||(538073-538203)
chr5 (21-189)||(14689415-14689581)
chr5 (28-144)||(30793195-30793309)
chr5 (58-155)||(32636872-32636968)
chr5 (58-155)||(42428454-42428550)
chr5 (60-155)||(9049368-9049462)
chr5 (71-197)||(39468586-39468712)
chr5 (58-155)||(533817-533913)
chr5 (32-105)||(8565945-8566017)
chr5 (22-105)||(9789211-9789295)
chr5 (58-98)||(16640964-16641004)
chr5 (22-197)||(18441635-18441811)
chr5 (58-98)||(19806467-19806507)
chr5 (22-105)||(26170859-26170943)
chr5 (22-105)||(26177979-26178063)
chr5 (58-154)||(42426259-42426354)
chr5 (58-105)||(5058142-5058189)
chr5 (58-108)||(3075682-3075732)
chr5 (62-155)||(42309963-42310055)
chr5 (114-182)||(35616190-35616258)
[»] chr4 (61 HSPs)
chr4 (16-253)||(33089827-33090065)
chr4 (28-233)||(22882746-22882949)
chr4 (28-233)||(22934410-22934613)
chr4 (19-144)||(12119598-12119722)
chr4 (18-197)||(12073397-12073575)
chr4 (18-183)||(379400-379563)
chr4 (58-191)||(56178661-56178793)
chr4 (58-197)||(27416989-27417128)
chr4 (21-182)||(34112838-34112997)
chr4 (72-197)||(40632450-40632575)
chr4 (45-197)||(46703505-46703658)
chr4 (58-183)||(8665428-8665552)
chr4 (58-197)||(9927482-9927621)
chr4 (43-155)||(26699451-26699563)
chr4 (28-197)||(37229716-37229885)
chr4 (18-155)||(2209761-2209898)
chr4 (28-230)||(6542174-6542376)
chr4 (18-155)||(50262685-50262821)
chr4 (18-155)||(50673833-50673967)
chr4 (61-197)||(52095389-52095525)
chr4 (66-193)||(37740635-37740761)
chr4 (58-189)||(48143057-48143187)
chr4 (58-144)||(26175660-26175745)
chr4 (56-154)||(33989893-33989991)
chr4 (60-197)||(34570440-34570577)
chr4 (16-78)||(38811173-38811235)
chr4 (58-155)||(41964463-41964560)
chr4 (71-191)||(4587970-4588090)
chr4 (58-155)||(12743949-12744045)
chr4 (58-155)||(12745338-12745434)
chr4 (58-197)||(12739574-12739713)
chr4 (58-197)||(26364241-26364380)
chr4 (58-149)||(5370107-5370197)
chr4 (60-155)||(5429727-5429821)
chr4 (22-105)||(13992282-13992364)
chr4 (28-155)||(21703830-21703956)
chr4 (58-105)||(29999830-29999877)
chr4 (53-144)||(37754979-37755070)
chr4 (58-105)||(47038435-47038482)
chr4 (58-195)||(5207866-5208003)
chr4 (76-197)||(24969117-24969238)
chr4 (21-155)||(36463378-36463509)
chr4 (58-155)||(6656004-6656100)
chr4 (74-155)||(12744087-12744167)
chr4 (58-155)||(48893662-48893758)
chr4 (18-155)||(54883068-54883203)
chr4 (58-197)||(5871825-5871964)
chr4 (58-154)||(8648188-8648283)
chr4 (58-197)||(35662446-35662585)
chr4 (71-155)||(36994572-36994655)
chr4 (58-98)||(41639530-41639570)
chr4 (26-197)||(44967821-44967992)
chr4 (71-197)||(12747793-12747919)
chr4 (71-105)||(3913545-3913579)
chr4 (74-144)||(12745476-12745545)
chr4 (73-183)||(29254514-29254623)
chr4 (114-188)||(34788854-34788928)
chr4 (58-144)||(51337123-51337208)
chr4 (58-183)||(52467378-52467502)
chr4 (75-188)||(6677482-6677597)
chr4 (114-190)||(44570445-44570521)
[»] chr2 (37 HSPs)
chr2 (34-220)||(30218044-30218230)
chr2 (18-155)||(24398105-24398242)
chr2 (34-238)||(33648135-33648340)
chr2 (58-197)||(45726934-45727073)
chr2 (58-197)||(36318033-36318172)
chr2 (58-189)||(6595030-6595160)
chr2 (36-155)||(28671978-28672097)
chr2 (72-197)||(5723294-5723418)
chr2 (58-197)||(723768-723907)
chr2 (58-189)||(4503157-4503286)
chr2 (18-105)||(17450675-17450759)
chr2 (58-188)||(30833360-30833490)
chr2 (58-197)||(1631756-1631895)
chr2 (58-197)||(17057393-17057532)
chr2 (58-197)||(17085376-17085515)
chr2 (58-197)||(35446908-35447047)
chr2 (58-197)||(42362357-42362496)
chr2 (58-189)||(45099769-45099898)
chr2 (58-188)||(4484354-4484484)
chr2 (58-144)||(36988100-36988185)
chr2 (58-155)||(2334442-2334538)
chr2 (22-197)||(11690506-11690679)
chr2 (58-197)||(29867874-29868013)
chr2 (28-197)||(42019864-42020035)
chr2 (28-155)||(17490143-17490268)
chr2 (58-105)||(34139794-34139841)
chr2 (58-105)||(39284933-39284980)
chr2 (58-191)||(36205689-36205820)
chr2 (58-194)||(11067313-11067449)
chr2 (58-183)||(11151615-11151739)
chr2 (22-155)||(33162440-33162570)
chr2 (58-103)||(42412117-42412161)
chr2 (58-98)||(14633849-14633889)
chr2 (66-197)||(38312245-38312376)
chr2 (58-105)||(26353281-26353328)
chr2 (66-155)||(36773610-36773698)
chr2 (58-155)||(42288135-42288230)
[»] chr8 (43 HSPs)
chr8 (58-197)||(34256531-34256669)
chr8 (36-170)||(7597647-7597781)
chr8 (58-197)||(34254355-34254493)
chr8 (58-189)||(17982667-17982797)
chr8 (52-153)||(32902191-32902292)
chr8 (58-197)||(42435015-42435154)
chr8 (52-155)||(11712018-11712121)
chr8 (58-189)||(31218271-31218401)
chr8 (58-189)||(42498208-42498338)
chr8 (66-230)||(5689244-5689407)
chr8 (34-170)||(29796320-29796457)
chr8 (58-155)||(40321128-40321224)
chr8 (58-189)||(1746243-1746372)
chr8 (58-197)||(15212791-15212930)
chr8 (66-196)||(30143346-30143476)
chr8 (60-197)||(40328784-40328922)
chr8 (18-104)||(10930184-10930269)
chr8 (58-144)||(33352209-33352294)
chr8 (18-197)||(11137031-11137209)
chr8 (22-197)||(3303660-3303833)
chr8 (18-78)||(9633592-9633652)
chr8 (58-197)||(27811283-27811422)
chr8 (58-197)||(40221750-40221889)
chr8 (58-105)||(4743238-4743285)
chr8 (58-189)||(12702658-12702788)
chr8 (58-144)||(1345395-1345480)
chr8 (58-108)||(4733800-4733850)
chr8 (58-155)||(4283572-4283668)
chr8 (58-155)||(18655448-18655544)
chr8 (58-155)||(44303903-44303999)
chr8 (58-105)||(2627833-2627880)
chr8 (58-105)||(8153855-8153902)
chr8 (58-108)||(3772286-3772336)
chr8 (66-144)||(4731717-4731794)
chr8 (32-197)||(19491698-19491862)
chr8 (58-155)||(19945383-19945480)
chr8 (58-143)||(3073898-3073981)
chr8 (58-183)||(4162517-4162640)
chr8 (58-155)||(18141868-18141964)
chr8 (71-108)||(30291701-30291738)
chr8 (23-98)||(3439607-3439683)
chr8 (58-197)||(8965715-8965854)
chr8 (71-155)||(41366651-41366734)
[»] chr3 (53 HSPs)
chr3 (18-189)||(46173371-46173540)
chr3 (16-220)||(20937639-20937842)
chr3 (18-197)||(30236130-30236308)
chr3 (18-183)||(46860494-46860657)
chr3 (58-197)||(45095169-45095307)
chr3 (43-142)||(55301981-55302079)
chr3 (28-238)||(35138700-35138909)
chr3 (43-197)||(4055773-4055926)
chr3 (43-197)||(29813068-29813221)
chr3 (16-216)||(26323053-26323255)
chr3 (58-230)||(7762238-7762409)
chr3 (58-191)||(23200162-23200294)
chr3 (58-191)||(37408470-37408602)
chr3 (58-155)||(40735431-40735527)
chr3 (58-197)||(19683913-19684052)
chr3 (58-182)||(29810889-29811012)
chr3 (58-148)||(6095623-6095712)
chr3 (58-188)||(7764479-7764608)
chr3 (58-191)||(23197963-23198095)
chr3 (58-155)||(54593752-54593848)
chr3 (58-197)||(760852-760991)
chr3 (58-197)||(34491217-34491356)
chr3 (43-155)||(4075480-4075592)
chr3 (58-189)||(5258168-5258298)
chr3 (72-197)||(22835040-22835165)
chr3 (43-105)||(43403753-43403815)
chr3 (18-155)||(49199453-49199590)
chr3 (28-197)||(53921498-53921666)
chr3 (58-183)||(9581302-9581426)
chr3 (60-105)||(16499126-16499171)
chr3 (18-197)||(43401785-43401965)
chr3 (58-155)||(44331593-44331689)
chr3 (58-230)||(51398787-51398958)
chr3 (74-189)||(5260363-5260477)
chr3 (28-155)||(32891152-32891277)
chr3 (43-98)||(41819532-41819587)
chr3 (71-154)||(44700515-44700597)
chr3 (58-155)||(29196410-29196506)
chr3 (58-98)||(40913397-40913437)
chr3 (53-96)||(5433901-5433944)
chr3 (58-105)||(7780028-7780075)
chr3 (71-197)||(29682364-29682490)
chr3 (58-105)||(39153385-39153432)
chr3 (58-105)||(40734595-40734642)
chr3 (58-105)||(47304348-47304395)
chr3 (58-144)||(9636150-9636235)
chr3 (58-103)||(2075099-2075144)
chr3 (60-105)||(4570049-4570094)
chr3 (52-105)||(33191928-33191980)
chr3 (58-197)||(5236481-5236619)
chr3 (114-182)||(8166536-8166604)
chr3 (58-98)||(27305734-27305774)
chr3 (58-158)||(31314490-31314589)
[»] scaffold0219 (1 HSPs)
scaffold0219 (34-169)||(27442-27577)
[»] chr6 (30 HSPs)
chr6 (58-197)||(5406224-5406362)
chr6 (58-197)||(5410549-5410687)
chr6 (73-220)||(25073551-25073698)
chr6 (61-197)||(31404702-31404837)
chr6 (58-197)||(5413418-5413556)
chr6 (18-98)||(26800691-26800770)
chr6 (60-230)||(4045396-4045566)
chr6 (18-197)||(22424811-22424990)
chr6 (58-197)||(2972963-2973102)
chr6 (18-182)||(5043648-5043810)
chr6 (58-197)||(21588936-21589075)
chr6 (58-197)||(21593669-21593808)
chr6 (58-197)||(26830147-26830286)
chr6 (32-197)||(3808706-3808872)
chr6 (58-189)||(30834560-30834690)
chr6 (58-191)||(2171556-2171687)
chr6 (58-155)||(28137432-28137528)
chr6 (23-105)||(26954277-26954357)
chr6 (63-189)||(33160381-33160506)
chr6 (18-197)||(17758028-17758206)
chr6 (58-105)||(5409093-5409140)
chr6 (58-189)||(16452353-16452483)
chr6 (72-154)||(9183069-9183150)
chr6 (58-95)||(33211209-33211246)
chr6 (22-105)||(6097438-6097522)
chr6 (58-105)||(16569119-16569166)
chr6 (18-105)||(17763087-17763173)
chr6 (58-155)||(603112-603208)
chr6 (22-105)||(412199-412283)
chr6 (58-98)||(3038927-3038967)
[»] chr7 (54 HSPs)
chr7 (28-194)||(4253523-4253689)
chr7 (71-220)||(5116587-5116736)
chr7 (18-155)||(22328375-22328511)
chr7 (58-197)||(48491584-48491723)
chr7 (43-197)||(3904626-3904780)
chr7 (18-105)||(8359301-8359387)
chr7 (58-191)||(35853926-35854058)
chr7 (22-197)||(48489436-48489609)
chr7 (58-189)||(23555054-23555184)
chr7 (58-155)||(3259043-3259139)
chr7 (58-191)||(14069857-14069989)
chr7 (58-191)||(14379885-14380017)
chr7 (58-155)||(29991101-29991197)
chr7 (58-155)||(32358078-32358174)
chr7 (58-197)||(18126649-18126788)
chr7 (58-197)||(22269978-22270117)
chr7 (58-197)||(27347822-27347961)
chr7 (58-196)||(6431977-6432115)
chr7 (28-220)||(26639303-26639499)
chr7 (32-155)||(30024731-30024852)
chr7 (18-105)||(34310701-34310787)
chr7 (58-155)||(19502226-19502322)
chr7 (58-191)||(41317458-41317590)
chr7 (58-154)||(8153391-8153486)
chr7 (58-197)||(41649035-41649173)
chr7 (58-197)||(43864249-43864388)
chr7 (71-155)||(47673980-47674063)
chr7 (71-197)||(4586166-4586292)
chr7 (71-197)||(26417321-26417447)
chr7 (58-197)||(39731374-39731513)
chr7 (41-155)||(2390330-2390442)
chr7 (34-108)||(18396412-18396486)
chr7 (58-144)||(23565085-23565170)
chr7 (28-197)||(31105388-31105556)
chr7 (28-97)||(31519007-31519076)
chr7 (22-99)||(12097857-12097932)
chr7 (58-197)||(25766984-25767124)
chr7 (58-197)||(2360996-2361135)
chr7 (58-197)||(29608742-29608881)
chr7 (58-110)||(30814528-30814580)
chr7 (22-154)||(47676126-47676255)
chr7 (58-105)||(496007-496054)
chr7 (58-105)||(24525526-24525573)
chr7 (58-105)||(25615950-25615997)
chr7 (22-105)||(36146398-36146479)
chr7 (117-188)||(43363556-43363627)
chr7 (58-191)||(4178786-4178917)
chr7 (60-197)||(4508732-4508869)
chr7 (58-144)||(31732993-31733078)
chr7 (77-230)||(36574558-36574710)
chr7 (58-155)||(1113705-1113801)
chr7 (114-220)||(1360230-1360338)
chr7 (74-155)||(6359992-6360072)
chr7 (72-105)||(48599372-48599405)
[»] scaffold0002 (1 HSPs)
scaffold0002 (58-191)||(434545-434677)
[»] scaffold1519 (1 HSPs)
scaffold1519 (58-189)||(930-1059)
[»] scaffold0236 (1 HSPs)
scaffold0236 (18-144)||(10548-10671)
[»] scaffold0286 (1 HSPs)
scaffold0286 (58-191)||(11569-11701)
[»] scaffold0016 (1 HSPs)
scaffold0016 (60-155)||(114650-114744)
[»] scaffold0006 (1 HSPs)
scaffold0006 (60-105)||(149123-149168)
[»] scaffold0466 (1 HSPs)
scaffold0466 (72-197)||(7332-7457)
[»] scaffold0176 (1 HSPs)
scaffold0176 (58-155)||(18028-18123)
[»] scaffold0066 (1 HSPs)
scaffold0066 (58-155)||(20439-20535)
[»] scaffold0053 (1 HSPs)
scaffold0053 (81-188)||(25068-25175)
[»] scaffold0491 (2 HSPs)
scaffold0491 (58-144)||(8759-8845)
scaffold0491 (58-144)||(11185-11271)
[»] scaffold0674 (1 HSPs)
scaffold0674 (58-98)||(3750-3790)


Alignment Details
Target: chr1 (Bit Score: 179; Significance: 1e-96; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 2926696 - 2926463
Alignment:
Q  15 aagaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttc 114  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| |||||    
T  2926696 aagaacaacaccaaagaattgtttacctagttcggtgcaacaatgacctactctgcagaagagattgatctctccaatccactaccaatgaattcgtttc 2926597  T
Q  115 aaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctccttccataaataagaca 214  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||     ||||||||||||||    
T  2926596 aaagagatgcaaaaaggttacaataaattaactttaacaagttcttcaagcacaaacctaatttctaccatttttccaatc-----ccataaataagaca 2926502  T
Q  215 ctcaatacttttcactttcccaagtgttttccaactcta 253  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  2926501 ctcaataattttcaatttcccaagtgttttccaactcta 2926463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 22079504 - 22079322
Alignment:
Q  15 aagaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttc 114  Q
    |||||||||||||||||| |||||| | |||| ||| || |||||||||||| ||  ||||| |||||||||||||||||| || |||||| ||  || |    
T  22079504 aagaacaacaccaaagaaatgtttaccaagtttggtccagcaatgacctactttggaggagaaattgatctctccaatccaatatcaatgagttctttac 22079405  T
Q  115 aaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    |||||||| ||||| |||||||| |||||| |||||||||| ||   ||| |||||  |||||||||||||||||||||||||    
T  22079404 aaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaacataatttctaccatttttccaatctc 22079322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 9109419 - 9109604
Alignment:
Q  34 tgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggtt 133  Q
    |||||| |||||| ||| |||| ||||| |||||| ||| ||||||||||||||||||| ||||| ||| |  ||  || ||||||||| ||||| ||||    
T  9109419 tgtttacctagtttggttcaacgatgacttactctatggaagagattgatctctccaatacactatcaacgtgttctttacaaagagatacaaaagggtt 9109518  T
Q  134 acaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctccttccataaataagacactcaa 219  Q
    |||| |||||||||| |||||| ||| |||| | |||  |||||||| |||||||  ||||||||| |||| || |||||||||||    
T  9109519 acaagaaattaacttcaacaagttctccaagtaaaaacttaatttcttccattttctcaatctcctaccatgaacaagacactcaa 9109604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 47255325 - 47255503
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    ||||||||||| ||| |||| | | |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||    
T  47255325 aacaacaccaa-gaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaa 47255422  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    ||||| ||||  |||||||| |||||| ||| |||||| ||   ||| ||||  |||||||||| ||||||||||||||||    
T  47255423 gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttttccaatctc 47255503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 6808639 - 6808479
Alignment:
Q  15 aagaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttc 114  Q
    ||||||||| |||| ||| | ||||||||||||||  ||||||| |||||||||| || |||||||||||||||||||||||||  ||||| ||  || |    
T  6808639 aagaacaactccaa-gaaatatttatctagttcggaccaacaataacctactctgaggaagagattgatctctccaatccactataaatgagttctttac 6808541  T
Q  115 aaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaat 176  Q
    |||||||| |||||  ||||||| || ||| ||| |||||| ||| |||| ||||| |||||    
T  6808540 aaagagatacaaaagagttacaagaagttagcttcaacaagctctccaagaacaaacctaat 6808479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 191
Target Start/End: Complemental strand, 47115331 - 47115183
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-aggttacaataaa 141  Q
    |||||||| ||||||||||||||||||  | ||||||||||||||||||||||||| |||||  ||| || ||||||||| |||||  |||||||| |||    
T  47115331 agttcggtccaacaatgacctactctggagcagagattgatctctccaatccactatcaatgggttt-ttacaaagagatacaaaatgggttacaagaaa 47115233  T
Q  142 ttaactttaacaagatcttcaagcacaaatctaatttctaccatttttcc 191  Q
    ||| ||| |||||| ||   ||| ||||  ||||||||||||| ||||||    
T  47115232 ttagcttaaacaagctcacaaagaacaaccctaatttctaccaattttcc 47115183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 20762833 - 20762686
Alignment:
Q  41 ctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataa 140  Q
    |||||||||| |||   ||||||||||||| ||||||||||||||||||||||||||| ||||| | || || | ||||||| ||||| |||||||| ||    
T  20762833 ctagttcggtccaaacttgacctactctgtaggagagattgatctctccaatccactatcaatg-agttcttacgaagagatacaaaagggttacaagaa 20762735  T
Q  141 attaactttaacaagatcttcaagcacaaatctaatttctaccattttt 189  Q
    |||| |||| ||||| ||   ||| ||||  |||||||||||| |||||    
T  20762734 attagctttgacaagttcacaaagaacaaccctaatttctacccttttt 20762686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 13316376 - 13316508
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  13316376 tgacctactctggaggagagattgaactctccaatccactatcaatg-agttcttccaaagagatacaaaagggttacaagaaattagctttgacaagtt 13316474  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  |||||||||||| |||||||    
T  13316475 cacaaagaacaaccctaatttctaccctttttcc 13316508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 37282692 - 37282812
Alignment:
Q  34 tgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggtt 133  Q
    |||||||||||||| || ||| | ||||||||||    ||||||||| |||||||||||||||||| ||||| ||  || ||||||||||||||| ||||    
T  37282692 tgtttatctagttcagtccaa-attgacctactccaaaggagagatttatctctccaatccactactaatgagttctttacaaagagatgcaaaagggtt 37282790  T
Q  134 acaataaattaactttaacaag 155  Q
    || |||||||| ||| ||||||    
T  37282791 accataaattagcttcaacaag 37282812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 50167165 - 50167295
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||| | |||||||||| ||||  ||| ||| |||| |||||||||||||||||||||||||||| |||||| ||| || ||||||||    
T  50167165 acaccaaaga-ttgttgacctagttcggtccaact-tgagctaatctgggggagagattgatctctccaatccactatcaatgagttt-ttacaaagaga 50167261  T
Q  122 tgcaaaaaggttacaataaattaactttaacaag 155  Q
    | ||||  |||||||| |||||| |||| |||||    
T  50167262 tacaaatgggttacaagaaattagctttgacaag 50167295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 13938287 - 13938143
Alignment:
Q  52 caacaatgacctac-tctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgc-aaaaaggttacaataaattaacttt 149  Q
    |||||||||||||| |||| ||||||||  |||||||||||||||||| |||||| ||| || ||||||||| | ||||||||||||| ||||||  |||    
T  13938287 caacaatgacctacatctgggggagaga--gatctctccaatccactatcaatgagtttcttacaaagagatacaaaaaaggttacaagaaattatattt 13938190  T
Q  150 aacaagatcttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
     ||||| ||| |||| || || ||||||||||||  ||| ||||||||    
T  13938189 tacaagttctccaagaac-aacctaatttctacccatttcccaatctc 13938143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 28242487 - 28242408
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||||||| ||| |||| | | |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  28242487 aacaacaccaa-gaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta 28242408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 31659382 - 31659243
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| |||| || || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  31659382 tgacctaatctgagggagagattgatctctccaatccactatcaat-aagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagct 31659284  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| |||   |||||||||| ||||||||||||||||    
T  31659283 cacaaagaacagccctaatttctacccatttttccaatctc 31659243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 4552661 - 4552785
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||| | || || ||||| ||| ||||  |||||||| |||||| ||| |||||| |    
T  4552661 tgacctactctgagggagagattgatctctccaatccattatcaatg-agttcttacaaagggatacaaaggggttacaagaaattagcttcaacaagct 4552759  T
Q  158 cttcaagcacaaatctaatttctacc 183  Q
    |   ||| ||||| ||||||||||||    
T  4552760 cacaaaggacaaacctaatttctacc 4552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 11348842 - 11348710
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || ||  |||||||| ||||  |||||||| |||||| ||| |||||| |    
T  11348842 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttagaaagagatacaaatgggttacaagaaattagcttcaacaagct 11348744  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  ||||||||||||| ||||||    
T  11348743 cacaaagaacaaccctaatttctaccaattttcc 11348710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 19754639 - 19754543
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  19754639 tgacctaatctgagggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatcggttacaagaaattagcttcaacaag 19754543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 28220250 - 28220346
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  28220250 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 28220346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 31925693 - 31925827
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    ||||||||||| ||| |||| | |||||||||| ||||  |||||||||||   ||||||||||||||||||||||||||| ||||| | || || ||||    
T  31925693 aacaacaccaa-gaaatgttcacctagttcggtccaact-tgacctactctagaggagagattgatctctccaatccactatcaatg-agttcttacaaa 31925789  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||| ||||  |||||||| |||||| ||| ||||||    
T  31925790 gagatacaaatgggttacaagaaattagcttcaacaag 31925827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 37168442 - 37168302
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-aggttacaataaattaactttaacaaga 156  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||||  |||||||| |||||| ||| ||||||     
T  37168442 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaatgggttacaagaaattagcttaaacaagc 37168344  T
Q  157 tcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    ||   ||| ||||  |||||||||| ||||||| ||||||||    
T  37168343 tcacaaagaacaaccctaatttctacccattttcccaatctc 37168302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 42297959 - 42298095
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||   |||||| | | |||||||| |||| |||||||||||||  |||||||||||||||| |||||||||| ||||| | || || ||||    
T  42297959 aacaacaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagagattgatctcttcaatccactatcaatg-agttcttacaaa 42298057  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||| ||||   ||||||| |||||| ||| ||||||    
T  42298058 gagatacaaatgagttacaagaaattagcttcaacaag 42298095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 49918528 - 49918398
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||| | |||||||||| ||||  ||||||| | || |||||||||||||||||||||||||||| ||||| | || || ||||||||    
T  49918528 acaccaaaga-ttgttgacctagttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatg-agttcttacaaagaga 49918432  T
Q  122 tgcaaaaaggttacaataaattaactttaacaag 155  Q
    | ||||  |||||||| |||||| ||| ||||||    
T  49918431 tacaaatgggttacaagaaattagcttcaacaag 49918398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 834191 - 834330
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||| | || || ||||| ||| ||||  |||||||| |||||| ||| |||||| |    
T  834191 tgacctactctgggggagagatagatctctccaatccactatcaatg-agttcttacaaagggatacaaatgggttacaagaaattagcttaaacaagct 834289  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  834290 cacaaagaacaaccctaatttctatccattttcccaatctc 834330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 8550811 - 8550950
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||| ||| ||||   ||||||| |||||| ||| |||||| |    
T  8550811 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagggatacaaatgagttacaagaaattagcttaaacaagct 8550909  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||| |||||||||| ||||||| ||||||||    
T  8550910 cacaaagaacaaacctaatttctacccattttcccaatctc 8550950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 13547113 - 13547252
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| ||| || ||| |||||| |    
T  13547113 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaaatagcttcaacaagct 13547211  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  13547212 cacaaagaacaaccctaatttctacccattttcccaatctc 13547252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 13549024 - 13549163
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||  ||||||  ||||||||| |    
T  13549024 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacatgaaattaggtttaacaagct 13549122  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  13549123 cacaaagaacaaccctaatttctacccattttcccaatctc 13549163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 197
Target Start/End: Original strand, 37033081 - 37033236
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaagg-ttacaataaa 141  Q
    |||||||| |||| |||||||||| ||  | ||||||| ||||||||||||||||| ||||| | || || ||||||||||||||| || |||||| |||    
T  37033081 agttcggtccaaccatgacctactatggagaagagattaatctctccaatccactatcaatg-agttcttacaaagagatgcaaaatggattacaagaaa 37033179  T
Q  142 ttaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    ||| ||| |||||| ||   ||| ||||  |||||||||| ||||||| ||||||||    
T  37033180 ttagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctc 37033236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 199
Target Start/End: Complemental strand, 41135968 - 41135824
Alignment:
Q  53 aacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaac 152  Q
    ||||||||||||||||| ||||||||  ||||||||   | || || ||| || ||  || |||| |||| ||||| | |||||| |||||||||| ||     
T  41135968 aacaatgacctactctgagggagaga--gatctctctgcttcagtatcaacgagttctttacaaatagatacaaaaggtttacaagaaattaacttcaaa 41135871  T
Q  153 aagatcttcaagcacaaatctaatttctaccatttttccaatctcct 199  Q
    ||| |||||||| |||||||||||||||||| |||||| | ||||||    
T  41135870 aagttcttcaagaacaaatctaatttctaccctttttctattctcct 41135824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 3157009 - 3156913
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| | || |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  3157009 tgacctaatatgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 3156913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 13659362 - 13659407
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||    
T  13659362 acctactctgggggagagattgatctctccaatccactatcaatga 13659407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 28223445 - 28223541
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| | || |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  28223445 tgacctaatatgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 28223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 28265578 - 28265674
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||| | | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  28265578 tgacctaatctgggggagagattgatctctccaatccactatcaaag-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 28265674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 197
Target Start/End: Original strand, 30476486 - 30476609
Alignment:
Q  74 agagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatct 173  Q
    |||||||||||| ||||||||| || |||||| ||  || ||||||||| ||||  ||||||||||||||| ||| |||||| || | ||| ||||  ||    
T  30476486 agagattgatctgtccaatccagtatcaatgagttc-ttacaaagagatacaaatgggttacaataaattatcttcaacaagttcataaagaacaaccct 30476584  T
Q  174 aatttctacc-atttttccaatctc 197  Q
    |||||||||| ||||| ||||||||    
T  30476585 aatttctacctattttcccaatctc 30476609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 46065062 - 46065022
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccacta 98  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  46065062 tgacctactctgggggagagattgatctctccaatccacta 46065022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 50169200 - 50169373
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||| ||| |||||||| ||||  ||||||| |||  ||||||||||||||||| |||||||||| |||||| |   || ||||||||    
T  50169200 acaccaaaga-ttgttgatccagttcggtccaact-tgacctaatctaggggagagattgatctcttcaatccactatcaatgagtac-ttacaaagaga 50169296  T
Q  122 tgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctacc-atttttccaatctc 197  Q
    | ||||   ||||||| |||||| |||| ||||| ||   ||| ||||  |||||||||||| ||||||||||||||    
T  50169297 tacaaatgagttacaagaaattagctttgacaagctcacaaagaacaaccctaatttctacccatttttccaatctc 50169373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 7482238 - 7482351
Alignment:
Q  41 ctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-aggttacaata 139  Q
    |||||||||| ||||  ||||||||||||  ||||||||||||||||||||| ||||| ||||| | || || ||||||||| |||||  |||||||| |    
T  7482238 ctagttcggtccaact-tgacctactctgaaggagagattgatctctccaattcactatcaatg-agttcttacaaagagatacaaaatgggttacaaga 7482335  T
Q  140 aattaactttaacaag 155  Q
    ||||| ||| ||||||    
T  7482336 aattagcttaaacaag 7482351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 44455304 - 44455257
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  44455304 tgacctaatctgggggagagattgatctctccaatccactatcaatga 44455257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 12318506 - 12318568
Alignment:
Q  16 agaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagaga 78  Q
    |||||||||||||| ||||||||| |||||||||| ||| ||||| ||||| || ||||||||    
T  12318506 agaacaacaccaaaaaattgtttacctagttcggtccaataatgaactactatgggggagaga 12318568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 13137999 - 13138096
Alignment:
Q  57 atgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||  ||||||||||| ||||| |||||||||| |||||   || || ||||||||||||||  |||||||| |||||| ||| ||||||    
T  13137999 atgacctactctaggggagagattgctctcttcaatccactatcaatg-tgttcttacaaagagatgcaaatgggttacaagaaattagcttcaacaag 13138096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 29136421 - 29136252
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||| | |||||||||| |||   ||||||||||||  ||||||||||||||||||||||||| | ||||| | || || |||||| || ||||    
T  29136421 aagaaatgttcacctagttcggtccaaacttgacctactctggaggagagattgatctctccaatccacgatcaatg-agttcttacaaagaaatacaaa 29136323  T
Q  128 aaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
      |||| ||| |||||| ||| |||||| ||   ||| ||||  |||||||||| ||||||| ||||||||    
T  29136322 tgggttccaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctc 29136252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 16455750 - 16455627
Alignment:
Q  73 gagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatc 172  Q
    |||||||||||||||||||||||||| ||||| | || || || |||||| ||||  |||||||| |||||| ||| |||||| ||  | || | |||||    
T  16455750 gagagattgatctctccaatccactatcaatg-agttcttacacagagatacaaatgggttacaagaaattagcttcaacaagctc-actagaaaaaatc 16455653  T
Q  173 taatttct-accatttttccaatctc 197  Q
    |||||||| |||||||| ||||||||    
T  16455652 taatttctcaccattttaccaatctc 16455627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 25652266 - 25652225
Alignment:
Q  20 caacaccaaagaattgtttatctagttcggtacaacaatgac 61  Q
    |||||||||||||||||||||| |||||||| ||||||||||    
T  25652266 caacaccaaagaattgtttatccagttcggttcaacaatgac 25652225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 2262983 - 2263095
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaat 142  Q
    |||||||  |||||||||||||| ||  |||| |||||||||||| |||||||||| |||| | ||  || |||| ||||  |||| |||||||| ||||    
T  2262983 agttcggaccaacaatgacctaccctaagggaaagattgatctcttcaatccactatcaataagttctttacaaaaagatataaaagggttacaagaaat 2263082  T
Q  143 taactttaacaag 155  Q
    || ||| ||||||    
T  2263083 tatcttcaacaag 2263095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 1833666 - 1833619
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||| ||||  ||||||||||||||||||||||||||| ||||||    
T  1833666 tgacctaatctggtggagagattgatctctccaatccactatcaatga 1833619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 3189474 - 3189427
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||||   |||||||||||||||||||||||||| ||||||    
T  3189474 tgacctactctggatgagagattgatctctccaatccactatcaatga 3189427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 3198291 - 3198244
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||||   |||||||||||||||||||||||||| ||||||    
T  3198291 tgacctactctggatgagagattgatctctccaatccactatcaatga 3198244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 3207130 - 3207083
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||||   |||||||||||||||||||||||||| ||||||    
T  3207130 tgacctactctggatgagagattgatctctccaatccactatcaatga 3207083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 3460821 - 3460706
Alignment:
Q  78 attgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaa-tctaat 176  Q
    |||||||||||||||| |||| ||||   ||  || |||||| || ||||| ||||||||||||||| ||| |||||| ||   ||| ||||| ||||||    
T  3460821 attgatctctccaatcgactatcaatatgttctttacaaagatatacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaactctaat 3460722  T
Q  177 ttctaccatttttcca 192  Q
    ||||||| ||||||||    
T  3460721 ttctaccctttttcca 3460706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 10925357 - 10925271
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaat--ttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||| |||||||||||||| ||||||||  || || ||||||||| ||||   ||||||| |||||| ||| ||||||    
T  10925357 gggagagattgatttctccaatccactatcaatgaattcttcttacaaagagatacaaatgagttacaagaaattagcttcaacaag 10925271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 155
Target Start/End: Complemental strand, 19752855 - 19752734
Alignment:
Q  32 attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaagg 131  Q
    |||||| | |||||||||| ||||  ||||||| | || | |||||||||||||||||||||| ||| ||||| | || || ||||||||| ||||  ||    
T  19752855 attgttgacctagttcggtccaact-tgacctaatatgggagagagattgatctctccaatcctctatcaatg-agttcttacaaagagatacaaatcgg 19752758  T
Q  132 ttacaataaattaactttaacaag 155  Q
    |||||| |||||| ||| ||||||    
T  19752757 ttacaagaaattagcttcaacaag 19752734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 238
Target Start/End: Complemental strand, 34603737 - 34603541
Alignment:
Q  41 ctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-aggttacaata 139  Q
    |||||||||| ||||  ||||||||||||  |||||||||||||||| |||||||| | ||||| | || || |||||||||  ||||  |||||||| |    
T  34603737 ctagttcggtccaact-tgacctactctggaggagagattgatctcttcaatccaccatcaatg-agttcttacaaagagataaaaaatgggttacaaga 34603640  T
Q  140 aattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctccttccataaataagacactcaatacttttcactttcccaag 238  Q
    ||||| ||| |||||| ||   ||| ||||  |||||||||| |||||||| |||||| |  | || || ||||||||||  | ||||||||||||||||    
T  34603639 aattagcttaaacaagctcacaaagaacaaccctaatttctacccattttttcaatct-caccaatgaacaagacactcatgaattttcactttcccaag 34603541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 36683824 - 36683777
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||||| ||||||||||||| ||| |||||||||| ||||||    
T  36683824 tgacctactctgggggagagattgatttctacaatccactatcaatga 36683777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 37503589 - 37503628
Alignment:
Q  66 tctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  37503589 tctgggggagagattgatctctccaatccactatcaatga 37503628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 45644378 - 45644425
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||| |||| |||||| ||||||||||||||||||||| ||||||    
T  45644378 tgacctaatctgggggagatattgatctctccaatccactatcaatga 45644425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 41361083 - 41360919
Alignment:
Q  32 attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaagg 131  Q
    |||||| | |||||||||| ||| | ||||||||| || |||||| ||||||||||  ||||||||| ||| || ||  || ||||||||| ||||  ||    
T  41361083 attgttgacctagttcggtccaata-tgacctactatgggggagatattgatctctttaatccactatcaacgagttc-ttacaaagagatacaaatggg 41360986  T
Q  132 ttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |||||| ||||||  || |||||| ||   ||| ||||| |||||||||| ||||||| ||||||||    
T  41360985 ttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctc 41360919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 44650165 - 44650282
Alignment:
Q  36 tttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttac 135  Q
    |||| |||||||||| ||| | ||||||||| |  || |||||||||||||| ||||||||||  ||||||||  || |||||||||  ||||   ||||    
T  44650165 tttacctagttcggtccaa-attgacctacttttgggaagagattgatctcttcaatccactattaatgaattatttacaaagagatataaaagatttac 44650263  T
Q  136 aataaattaactttaacaa 154  Q
    ||||||||| | |||||||    
T  44650264 aataaattagcgttaacaa 44650282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 193739 - 193659
Alignment:
Q  74 agagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| ||||||    
T  193739 agagattgatctctccaatccactatcaatg-agttattacaaagagatacaaatgagttacaagaaattagcttcaacaag 193659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 196897 - 197063
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtggg-agagattgatctctccaatccactaccaatgaatttgtttcaaagag 120  Q
    |||||||||| ||||| ||| |||||||| ||||  ||||||| |||| ||| ||||||  ||||||||||||||||| ||||| | || || ||||| |    
T  196897 acaccaaaga-ttgttgatccagttcggtccaact-tgacctaatctggggggagagataaatctctccaatccactatcaatg-agttcttacaaaggg 196993  T
Q  121 atgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttc 190  Q
    || ||||   ||||||| |||||||||| |||||| ||   ||| ||||  ||||||||||||| |||||    
T  196994 atacaaatgagttacaagaaattaacttaaacaagctcacaaagaacaaccctaatttctaccaattttc 197063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 5460080 - 5460003
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||| |||||| ||||||| |  ||||||||| |||||||    ||||||||||||||||||||| |||| ||||||    
T  5460080 aagaaatgtttacctagttcagcccaacaatgatctactctagatgagagattgatctctccaatctactatcaatga 5460003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 8871089 - 8871126
Alignment:
Q  61 cctactctgtgggagagattgatctctccaatccacta 98  Q
    |||||| || ||||||||||||||||||||||||||||    
T  8871089 cctactatgggggagagattgatctctccaatccacta 8871126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 32471579 - 32471510
Alignment:
Q  84 ctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaaca 153  Q
    ||||| ||||||||| |||||| ||| || ||||||||| |||||  ||| |||||||||||||| ||||    
T  32471579 ctctcgaatccactatcaatgagtttcttacaaagagatacaaaagagttgcaataaattaacttcaaca 32471510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 37559905 - 37560017
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaacttt-aacaagatcttcaagcacaa 169  Q
    |||||||||||||||||||||| ||||| ||| | | || || ||||||||| ||||  |||||||| |||||| |||| |||||| ||   ||| ||||    
T  37559905 gggagagattgatctctccaattcactatcaacg-agttcttacaaagagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaacaa 37560003  T
Q  170 atctaatttctacc 183  Q
     |||||||||||||    
T  37560004 ctctaatttctacc 37560017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 40122186 - 40122260
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccacta 98  Q
    |||||||||| ||||| | |||||||||| ||||  ||||||| | || |||||||||||||||||| |||||||||    
T  40122186 acaccaaaga-ttgttgacctagttcggtccaact-tgacctaatatgggggagagattgatctctctaatccacta 40122260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 51765538 - 51765494
Alignment:
Q  61 cctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||  ||||||||||| ||||||||||||||| ||||||    
T  51765538 cctactctggaggagagattgaactctccaatccactatcaatga 51765494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 316948 - 316777
Alignment:
Q  16 agaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttca 115  Q
    |||||||||| ||||||||||||| | |||||||| |||||||||||||||||  |||||||||||||| |||| ||||| || |||||| ||  || ||    
T  316948 agaacaacac-aaagaattgtttaccaagttcggtccaacaatgacctactctaggggagagattgatccctccgatccattatcaatgagttctttaca 316850  T
Q  116 aagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttt 188  Q
    ||||||| ||||| | |||||| |||||| ||| |||||| ||| |||| ||||| |||||||||||| ||||    
T  316849 aagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaacaaacctaatttctaccttttt 316777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 194
Target Start/End: Complemental strand, 3326063 - 3325922
Alignment:
Q  53 aacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaac 152  Q
    |||||||||||||| |||| |||| ||||||||||| ||||||| | || ||| ||  || ||||||||| || || |||||||| |||||| ||| |||    
T  3326063 aacaatgacctactatgtgagagatattgatctctctaatccaccatcattgagttctttacaaagagatacacaatggttacaagaaattagcttcaac 3325964  T
Q  153 aagatcttcaagcacaaatctaatttctaccatttttccaat 194  Q
    ||| |||||||| ||||| |||||||||||| ||||| ||||    
T  3325963 aagctcttcaagaacaaaactaatttctacctttttttcaat 3325922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 25412904 - 25412766
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  25412904 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagctttgacaagtt 25412806  T
Q  158 cttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||||| |||| ||||||||    
T  25412805 cacaaagaacaaccctaatttctacccttttcccaatctc 25412766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 10054799 - 10054964
Alignment:
Q  17 gaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaa 116  Q
    ||||||||||||||| | ||||| |||||| ||| ||||||| ||| ||| || |||||| |||||| |||||||| ||||| |||||| ||  || |||    
T  10054799 gaacaacaccaaagagtcgtttacctagtttggtccaacaattacccactttgggggagatattgatatctccaatacactatcaatgagttcattacaa 10054898  T
Q  117 agagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctacc 183  Q
    |||||| | ||||||||| || |||||| ||| |||||  |||||||| |||||  |||||||||||    
T  10054899 agagatac-aaaaggttataagaaattagcttcaacaaactcttcaagaacaaacataatttctacc 10054964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 10700632 - 10700809
Alignment:
Q  16 agaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttca 115  Q
    |||||||||| |||||||| ||||   ||||||||  |||||||||||||| || ||||||||  |||||||||| | ||||| |||||| ||  ||| |    
T  10700632 agaacaacacgaaagaattatttactcagttcggtgaaacaatgacctactatgggggagaga--gatctctccacttcactatcaatgagttcttttta 10700729  T
Q  116 aagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatct 196  Q
    ||||||| |||||| |||| ||  ||||| ||| |||||| |||  ||| ||||| |||||||||||| ||||||||||||    
T  10700730 aagagatacaaaaatgttataa-gaattagcttcaacaagctctctaagaacaaacctaatttctaccttttttccaatct 10700809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 155
Target Start/End: Complemental strand, 28278489 - 28278364
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    |||||||||| | | |||||||| ||||  ||||||||||||  ||||||||||||||||||||||||||| |||||| ||| || ||||||||| ||||    
T  28278489 aagaattgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttt-ttacaaagagatacaaa 28278392  T
Q  128 aaggttacaataaattaactttaacaag 155  Q
      |||||||| |||||| ||| ||||||    
T  28278391 tgggttacaagaaattagcttcaacaag 28278364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 16452253 - 16452085
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||| | |||||||| ||||  |||||||||||| |||||||||| |||||||||||||||||  |||| | || || ||||||||| ||||    
T  16452253 aagaaatgtttacccagttcggtccaact-tgacctactctgggggagagatttatctctccaatccactatgaatg-agttcttacaaagagatacaaa 16452156  T
Q  128 aaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
      |||||||| |||||| ||| |||||| ||   ||| |||||  ||||||||| ||||||||||||||||    
T  16452155 tgggttacaagaaattagcttcaacaagctcagaaagaacaaacttaatttctacccatttttccaatctc 16452085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 183
Target Start/End: Original strand, 33906017 - 33906179
Alignment:
Q  21 aacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagag 120  Q
    ||||| ||||||||||||| | || ||||| ||||| |||||||||||  || |||||||||||| ||||||| |||| |||||| ||  || |||||||    
T  33906017 aacacaaaagaattgtttacccagctcggtccaacattgacctactctagggaagagattgatctttccaatctactatcaatgagttctttacaaagag 33906116  T
Q  121 atgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctacc 183  Q
    || ||||| | |||||| || ||| |||  ||||| ||| ||||||| || ||||||| ||||    
T  33906117 atacaaaaggattacaagaagttagcttcgacaagctctccaagcactaacctaatttatacc 33906179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 191
Target Start/End: Complemental strand, 30182767 - 30182600
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||| ||| |||||||| |||   |||| |||||||  ||||||||||| ||||||||||||||| ||||| | || || ||||||||    
T  30182767 acaccaaaga-ttgttcatccagttcggtccaaacttgacatactctggaggagagattgaactctccaatccactatcaatg-agttcttccaaagaga 30182670  T
Q  122 tgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttcc 191  Q
    |  |||| |||||||| |||||| |||| ||||| ||   ||| ||||  ||||||||||||||||||||    
T  30182669 tagaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccatttttcc 30182600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 37439285 - 37439189
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||||  ||||||| ||||||||||| |||||    
T  37439285 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagagttacaagaaattaactttgacaag 37439189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 213609 - 213470
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||| ||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| |||||||||| |    
T  213609 tgacctactatggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagctttaacaagct 213511  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  213510 cacaaagaacaaccctaatttctacccattttcccaatctc 213470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 13239895 - 13239756
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||||  ||||||| |||||| ||| |||||| |    
T  13239895 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagagttacaagaaattagcttcaacaagtt 13239797  T
Q  158 cttcaagcacaaatctaatttctacca-tttttccaatctc 197  Q
    |   ||| | ||  ||||||||||||| |||||||||||||    
T  13239796 cacaaagaaaaaccctaatttctaccattttttccaatctc 13239756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 33831824 - 33831685
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| | || ||||||||||||||||| |||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  33831824 tgacctaatatgggggagagattgatctcttcaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttaaacaagct 33831726  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||| |||||||||| ||||||||||||||||    
T  33831725 cacaaagaacaaacctaatttctacccatttttccaatctc 33831685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 189
Target Start/End: Complemental strand, 13343219 - 13343075
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaat 142  Q
    |||||||| |||  |||||||||||||  ||||||||||| ||||||||||||||| |||||| ||   ||||||||||| ||||| | |||||| ||||    
T  13343219 agttcggtccaaacatgacctactctggaggagagattgaactctccaatccactatcaatgagtt--cttcaaagagatacaaaaggattacaagaaat 13343122  T
Q  143 taactttaacaagatcttcaagcacaaatctaatttctaccattttt 189  Q
    || |||| ||||| ||   ||| ||||  |||||||||||| |||||    
T  13343121 tagctttgacaagttcacaaagaacaaccctaatttctacccttttt 13343075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 27637622 - 27637677
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccacta 98  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  27637622 agttcggtccaacaatgacctactctgcaggagagattgatctctccaatccacta 27637677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 30682946 - 30683044
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaat-ttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| |||||||||||||||||||||||||||| |||||| | || || |||||| || ||||| |||||||| |||||| ||| ||||||    
T  30682946 tgacctaatctgggggagagattgatctctccaatccactatcaatgagtattcttacaaagaaatacaaaagggttacaagaaattagcttcaacaag 30683044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 16409656 - 16409480
Alignment:
Q  22 acaccaaaga-attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagag 120  Q
    |||||||||| |||||| | | |||||||| |||   ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||  |   ||||||    
T  16409656 acaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagag 16409557  T
Q  121 atgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    || |||||  ||||||| ||||||  ||| ||||| ||   ||| ||||  |||||||||||| |||||||||||||    
T  16409556 atacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccctaatttctaccctttttccaatctc 16409480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 28750679 - 28750818
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || |||| |||| ||||  |||||||  |||||||||| |||||  |    
T  28750679 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaaaagatacaaatgggttacaggaaattaacttcaacaattt 28750777  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    | | ||| ||||  |||||||||| ||||||| ||||||||    
T  28750778 cataaagaacaaccctaatttctacccattttcccaatctc 28750818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 189
Target Start/End: Original strand, 36074032 - 36074196
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||| ||| |||||||| |||   ||||||||| ||  ||||||||||| ||||||||||||||| |||||| ||   ||||||||||    
T  36074032 acaccaaaga-ttgttcatccagttcggtccaaacttgacctactttggaggagagattgaactctccaatccactatcaatgagtt--cttcaaagaga 36074128  T
Q  122 tgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccattttt 189  Q
    | |||||  ||||||| |||||| |||| ||||| ||   ||| ||||  |||||||||||| |||||    
T  36074129 tacaaaagagttacaagaaattagctttgacaagttcgcaaagaacaaccctaatttctacccttttt 36074196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 38747141 - 38747010
Alignment:
Q  66 tctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagc 165  Q
    |||| |||||||||||||||||||||||| ||| |||||| ||| || ||||||||| ||||  |||||||| |||||| ||| |||||| ||   |||     
T  38747141 tctgagggagagattgatctctccaatcctctatcaatgagttt-ttccaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaga 38747043  T
Q  166 acaaatctaatttcta-ccatttttccaatctc 197  Q
    ||||  |||||||||| ||||||| ||||||||    
T  38747042 acaaccctaatttctacccattttcccaatctc 38747010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 40147405 - 40147266
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| |||||| |    
T  40147405 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagct 40147307  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  40147306 cacgaagaacaaccctaatttctacccattttcccaatctc 40147266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 4160758 - 4160703
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccacta 98  Q
    |||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  4160758 agtttggtccaacaatgacctactctggaggagagattgatctctccaatccacta 4160703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 13488347 - 13488209
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||  |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  13488347 tgacctaatctcggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagtt 13488249  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatct 196  Q
    |   ||| ||||  |||||||||| ||||||| |||||||    
T  13488248 cacaaagaacaaccctaatttctacccattttcccaatct 13488209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 538203 - 538073
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||| ||| |||||||| ||||  ||||||| | || ||||||||||||||||||||||| |||| ||||| | || || ||||||||    
T  538203 acaccaaaga-ttgttgatccagttcggtccaact-tgacctaatatgggggagagattgatctctccaatctactatcaatg-agttcttacaaagaga 538107  T
Q  122 tgcaaaaaggttacaataaattaactttaacaag 155  Q
    | ||||  |||||||| |||||| ||| ||||||    
T  538106 tacaaatgggttacaagaaattagcttcaacaag 538073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 14689415 - 14689581
Alignment:
Q  21 aacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagag 120  Q
    |||| |||||||||||||| ||||||| || |||||||||| ||| ||| || |||||  ||||| || ||| ||||| |||| ||||  || |||||||    
T  14689415 aacaacaaagaattgtttacctagttcagtccaacaatgacataccctgaggaagaga--gatctatcaaattcactaacaataaattatttacaaagag 14689512  T
Q  121 atgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccattttt 189  Q
    || ||||||  |||||| |||||| ||| ||||||  || || | |||||  |||||||||||| ||||    
T  14689513 atacaaaaatattacaaaaaattagcttcaacaagcactccatgaacaaacataatttctaccaatttt 14689581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 30793309 - 30793195
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||| || ||||||| |||||||||| ||||||  ||||||||  |||||||||| | ||||| |||| | ||  || ||||||||| ||||    
T  30793309 aagaaatgtttaccttgttcggtccaacaatgacttactctaggggagaga--gatctctccacttcactatcaattagttctttacaaagagatacaaa 30793212  T
Q  128 aaggttacaataaatta 144  Q
    | |||||||||||||||    
T  30793211 atggttacaataaatta 30793195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 32636968 - 32636872
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||| | | || || ||||||||| ||||  |||||||| |||||| |||| |||||    
T  32636968 tgacctaatctgggggagagattgatctctccaatccactatcaaag-agttcttacaaagagatacaaatgggttacaagaaattagctttgacaag 32636872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 42428454 - 42428550
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| | || |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  42428454 tgacctaatatgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 42428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 9049368 - 9049462
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| || |||||| ||||||||||||||||||||  ||||| | || || ||||||||| ||||| |||||||| |||||| ||| ||||||    
T  9049368 acctactttgggggagatattgatctctccaatccactgtcaatg-agttcttacaaagagatacaaaatggttacaagaaattagcttcaacaag 9049462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 39468586 - 39468712
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaa 170  Q
    |||||||||||||||||| ||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| ||   ||| ||||     
T  39468586 gggagagattgatctctctaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaac 39468684  T
Q  171 tctaatttcta-ccatttttccaatctc 197  Q
     |||||||||| ||||||| ||||||||    
T  39468685 cctaatttctacccattttcccaatctc 39468712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 533913 - 533817
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| | || ||||||||||||||| |||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  533913 tgacctaatatgggggagagattgatctttccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaaaaaattagcttcaacaag 533817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 8565945 - 8566017
Alignment:
Q  32 attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||| | |||||||||| ||||  ||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  8565945 attgttgacctagttcggtccaact-tgacctaatctgggtgagagattgatctctccaatccactatcaatga 8566017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 9789211 - 9789295
Alignment:
Q  22 acaccaaaga-attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||| |||||| | | |||||||| |||   ||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  9789211 acaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatga 9789295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 16640964 - 16641004
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  16640964 tgacctactctggaggagagattgatctctccaatccacta 16641004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 18441635 - 18441811
Alignment:
Q  22 acaccaaaga-attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagag 120  Q
    |||||||||| |||||| | | |||||||| |||   |||||||||||   ||||||||||| ||||||||||||||| |||||| ||  |   ||||||    
T  18441635 acaccaaagagattgttcacccagttcggtccaaacttgacctactctagaggagagattgaactctccaatccactatcaatgagttcttacaaaagag 18441734  T
Q  121 atgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    || |||||  ||||||| ||||||  ||| ||||| ||   | | ||||  |||||||||||| |||||||||||||    
T  18441735 atacaaaagagttacaagaaattagatttgacaagttcacaaggaacaaccctaatttctaccctttttccaatctc 18441811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 19806507 - 19806467
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  19806507 tgacctaatctgggggagagattgatctctccaatccacta 19806467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 26170943 - 26170859
Alignment:
Q  22 acaccaaaga-attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||| |||||| | | |||||||| |||   ||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  26170943 acaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatga 26170859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 26178063 - 26177979
Alignment:
Q  22 acaccaaaga-attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||| |||||| | | |||||||| |||   ||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  26178063 acaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatga 26177979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 42426259 - 42426354
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaa 154  Q
    ||||||| || | |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||| ||| |||||| ||| |||||    
T  42426259 tgacctaatcagggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttgcaagaaattagcttcaacaa 42426354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 5058189 - 5058142
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||||   ||||||||||||||||||||||||||| ||||||    
T  5058189 tgacctactctagaggagagattgatctctccaatccactatcaatga 5058142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 3075682 - 3075732
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatt 108  Q
    ||||||||| || |||||||||||||||||||||| ||||| ||| |||||    
T  3075682 tgacctactatgagggagagattgatctctccaattcactatcaacgaatt 3075732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 42309963 - 42310055
Alignment:
Q  62 ctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||| || |||||||||||||||| | ||||||||| |||| || || || ||||||||| |||||  ||||||| |||||| ||| ||||||    
T  42309963 ctactatgggggagagattgatctcgctaatccactatcaat-aagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaag 42310055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 35616258 - 35616190
Alignment:
Q  114 caaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctac 182  Q
    |||||| || ||||| |||||||| |||||||||| ||| || ||| |||| ||||| |||||||||||    
T  35616258 caaagaaatacaaaagggttacaagaaattaacttaaacgagctctccaagaacaaacctaatttctac 35616190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 253
Target Start/End: Complemental strand, 33090065 - 33089827
Alignment:
Q  16 agaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttca 115  Q
    ||||||||  |||||||||||||||||||| |||| ||||||| |||||||||   ||||||||||||||||| ||||||||| |||||| ||  || ||    
T  33090065 agaacaacttcaaagaattgtttatctagtccggtccaacaataacctactctagaggagagattgatctctctaatccactatcaatgagttctttaca 33089966  T
Q  116 aagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctccttccataaataagaca 214  Q
     |||||| ||||| ||||| ||||||||| ||| |||||| ||| |||| |||||  |||||||||  ||| | | ||||||| | |||| || ||||||    
T  33089965 gagagatacaaaatggttataataaattagcttcaacaagctctccaagaacaaacataatttctattcatctct-caatctcttcccatgaacaagaca 33089867  T
Q  215 ctcaatacttttcact-ttcccaagtgttttccaactcta 253  Q
    ||||||  |||||||| |||| | |||||| |||||||||    
T  33089866 ctcaatgattttcactcttccaaggtgtttcccaactcta 33089827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 22882746 - 22882949
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||||| |||||||| |||||||||||||||| | ||||||  ||||| |||| |||||||||||||||| ||  || | ||||||| ||||    
T  22882746 aagaaatgtttatccagttcggtccaacaatgacctactccgggggaga--ttgatttctctaatccactaccaatgagttctttacgaagagatacaaa 22882843  T
Q  128 aaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctccttccataaataagacactcaatactttt 226  Q
    | |||||||| |||||| ||| |||||  ||| |||| ||||| ||||||| || |||||||| ||||||| |||||| || ||| ||||||||  ||||    
T  22882844 agggttacaagaaattagcttcaacaaactctccaagaacaaacctaatttttatccattttt-caatctctttccatgaacaaggcactcaatgatttt 22882942  T
Q  227 cactttc 233  Q
    |||||||    
T  22882943 cactttc 22882949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 22934410 - 22934613
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||||| |||||||| |||||||||||||||| | ||||||  ||||| |||| |||||||||||||||| ||  || | ||||||| ||||    
T  22934410 aagaaatgtttatccagttcggtccaacaatgacctactccgggggaga--ttgatttctctaatccactaccaatgagttctttacgaagagatacaaa 22934507  T
Q  128 aaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctccttccataaataagacactcaatactttt 226  Q
    | |||||||| |||||| ||| |||||  ||| |||| ||||| ||||||| || |||||||| ||||||| |||||| || ||| ||||||||  ||||    
T  22934508 agggttacaagaaattagcttcaacaaactctccaagaacaaacctaatttttatccattttt-caatctctttccatgaacaaggcactcaatgatttt 22934606  T
Q  227 cactttc 233  Q
    |||||||    
T  22934607 cactttc 22934613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 12119722 - 12119598
Alignment:
Q  19 acaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaag 118  Q
    ||||||||||  ||||||| | |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||| ||  || |||||    
T  12119722 acaacaccaagaaattgttcacctagttcggtccaacaatgacctactct-tgggagagattgatctctccaatccactataaatgagttctttacaaag 12119624  T
Q  119 agatgcaaaaaggttacaataaatta 144  Q
    |||| ||||| |||||||| ||||||    
T  12119623 agatacaaaagggttacaagaaatta 12119598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 12073575 - 12073397
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    ||||||||||| ||| |||| | |||||||||| ||||||||||||||||||   |||||||||||||||||||||||||| ||||| | || || ||||    
T  12073575 aacaacaccaa-gaaatgttcacctagttcggtccaacaatgacctactctggaagagagattgatctctccaatccactatcaatg-agttcttacaaa 12073478  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    ||||| ||||   |||||||||||||| ||| |||||| ||   ||| ||||| |||||||||| ||||||| ||||||||    
T  12073477 gagatacaaatgagttacaataaattagcttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctc 12073397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 379563 - 379400
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    ||||||||||| ||| |||| ||| |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| ||||  | || || ||||    
T  379563 aacaacaccaa-gaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaat-tagttcttacaaa 379466  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctacc 183  Q
    | ||| ||||  |||||||| |||||| ||| |||||| ||   ||| ||||| ||||||||||||    
T  379465 gcgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacc 379400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 56178661 - 56178793
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| ||| |||||| |    
T  56178661 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagcttcaacaagtt 56178759  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  |||||||||||| |||||||    
T  56178760 cacaaagaacaaccctaatttctaccctttttcc 56178793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 27416989 - 27417128
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| |||||| ||| || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  27416989 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttt-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagct 27417087  T
Q  158 cttcaagcacaaatctaatttctac-catttttccaatctc 197  Q
    |   ||| ||||  ||||||||||| |||||| ||||||||    
T  27417088 cacaaagaacaaccctaatttctacacattttaccaatctc 27417128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 182
Target Start/End: Complemental strand, 34112997 - 34112838
Alignment:
Q  21 aacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagag 120  Q
    ||||||||| ||||||||| | | |||||| ||||||||||||||| |  ||||||||  |||||||||| | ||||| |||||| ||  || |||||||    
T  34112997 aacaccaaataattgtttaccaaattcggtccaacaatgacctactataggggagaga--gatctctccacttcactatcaatgagttctttacaaagag 34112900  T
Q  121 atgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctac 182  Q
    |||||||| |||||||  |||||| ||| |||||| ||| | || |||||  ||||||||||    
T  34112899 atgcaaaagggttacatgaaattagcttcaacaagctctcctagaacaaacataatttctac 34112838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 40632575 - 40632450
Alignment:
Q  72 ggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaat 171  Q
    ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||| ||||||||| |||||| ||| |||||| ||   ||| |||| |    
T  40632575 ggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaact 40632477  T
Q  172 ctaatttcta-ccatttttccaatctc 197  Q
    |||||||||| ||||||| ||||||||    
T  40632476 ctaatttctacccattttcccaatctc 40632450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 197
Target Start/End: Complemental strand, 46703658 - 46703505
Alignment:
Q  45 ttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-aggttacaataaatt 143  Q
    |||||| ||||||||||||||||||  |||||||||||||||||||||||||||  |||| | || || ||||||||| |||||  |||||||| |||||    
T  46703658 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataaatg-agttcttacaaagagatacaaaatgggttacaagaaatt 46703560  T
Q  144 aactttaacaagatcttcaagcacaaatctaatttctac-catttttccaatctc 197  Q
    | ||| |||||| ||   ||| ||||  ||||||||||| |||||| ||||||||    
T  46703559 agcttaaacaagctcacaaagaacaaccctaatttctactcattttcccaatctc 46703505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 183
Target Start/End: Complemental strand, 8665552 - 8665428
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  8665552 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagct 8665454  T
Q  158 cttcaagcacaaatctaatttctacc 183  Q
    ||  ||| ||||  ||||||||||||    
T  8665453 ctcaaagaacaaccctaatttctacc 8665428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 9927482 - 9927621
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  9927482 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagtt 9927580  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  9927581 cacaaagaacaaccctaatttctacccattttcccaatctc 9927621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 26699451 - 26699563
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaat 142  Q
    |||||||| |||||||||||||||||| |  |||||||||||||||||||||| ||  ||||| ||  || ||||||||| |||||  ||||||| ||||    
T  26699451 agttcggtccaacaatgacctactctgggatagagattgatctctccaatccattataaatgagttctttacaaagagatacaaaagagttacaagaaat 26699550  T
Q  143 taactttaacaag 155  Q
    || ||| ||||||    
T  26699551 tagcttcaacaag 26699563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 37229716 - 37229885
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||| |||||||||| ||||  ||||||||| || ||||||||||||||||||||||||||||  |||| | || || |||||||||  |||    
T  37229716 aagaaatgtttacctagttcggtccaact-tgacctactatgagggagagattgatctctccaatccactataaatg-agttcttacaaagagatataaa 37229813  T
Q  128 aa-ggttacaataaattaactttaacaagatcttcaagcaca-aatctaatttctaccatttttccaatctc 197  Q
    || |||||||| |||||  |||||||||| ||   ||| ||| |  ||||||||||||||||| ||||||||    
T  37229814 aagggttacaacaaatttgctttaacaagctcacaaagaacacaccctaatttctaccattttcccaatctc 37229885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 2209898 - 2209761
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||   |||||| | | |||||||| |||| |||||||||||||  ||||||||| ||||||||||||||||| ||||| | || || ||||    
T  2209898 aacaacaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagagattaatctctccaatccactatcaatg-agttcttacaaa 2209800  T
Q  118 gagatgcaaaa-aggttacaataaattaactttaacaag 155  Q
    ||||| |||||  |||||||| |||||| ||| ||||||    
T  2209799 gagatacaaaatgggttacaagaaattagcttcaacaag 2209761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 230
Target Start/End: Original strand, 6542174 - 6542376
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||| | |||||||| ||||  |||||||| ||| |||||||||||||||||||||||||||| ||| | | || || ||||||||| ||||    
T  6542174 aagaaatgtttacccagttcggtccaact-tgacctaccctgggggagagattgatctctccaatccactatcaacg-agttcttacaaagagatacaaa 6542271  T
Q  128 aaggttacaataaattaactttaacaagatcttcaagcacaaat-ctaatttctaccattttt--ccaatctccttccataaataagacactcaatactt 224  Q
    | | | |||| ||||||  || |||||| ||   ||| |||||| ||||||||||||||||||  |||||||||  | || || ||||||||||||| ||    
T  6542272 aggctaacaagaaattagtttcaacaagctcacaaagaacaaatcctaatttctaccattttttcccaatctcc-ccaatgaacaagacactcaataatt 6542370  T
Q  225 ttcact 230  Q
    ||||||    
T  6542371 ttcact 6542376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 50262685 - 50262821
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||   |||||| | | |||||||| ||||||||||||||||||  ||| |||||||| ||||||||| |||| ||||| | || || ||||    
T  50262685 aacaacaccaagagattgttcacccagttcggtccaacaatgacctactctggaggaaagattgatatctccaatcaactatcaatg-agttcttacaaa 50262783  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||| ||||  |||||||| |||||| ||| ||||||    
T  50262784 gagatacaaatgggttacaagaaattagcttcaacaag 50262821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 50673833 - 50673967
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    ||||||||||| ||| |||| | |||||||||| ||||  ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||    
T  50673833 aacaacaccaa-gaaatgttcacctagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaa 50673929  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||| ||||   ||||||| |||||| ||| ||||||    
T  50673930 gagatacaaatgagttacaagaaattagcttcaacaag 50673967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 52095389 - 52095525
Alignment:
Q  61 cctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatctt 160  Q
    |||||||||  ||||||||||||||||||||||||||| ||| | |||| || ||||||||| ||||  |||||||| |||||| |||| ||||| ||      
T  52095389 cctactctggaggagagattgatctctccaatccactatcaaag-atttcttacaaagagatacaaatgggttacaagaaattagctttgacaagttcac 52095487  T
Q  161 caagcacaaatctaatttcta-ccatttttccaatctc 197  Q
     ||| ||||  |||||||||| ||||||| ||||||||    
T  52095488 aaagaacaaccctaatttctacccattttcccaatctc 52095525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 37740761 - 37740635
Alignment:
Q  66 tctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagc 165  Q
    |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| ||   |||     
T  37740761 tctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaaga 37740663  T
Q  166 acaaatctaatttctaccatttttccaa 193  Q
    ||||  ||||||| |||| |||||||||    
T  37740662 acaaccctaatttataccctttttccaa 37740635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 48143187 - 48143057
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || ||   ||||||| ||||| |||||||| |||||| ||| |||||| |    
T  48143187 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttatgaagagatacaaaagggttacaagaaattagcttcaacaagtt 48143089  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  |||||||||||| |||||    
T  48143088 cacaaagaacaaccctaatttctacctttttt 48143057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 26175660 - 26175745
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| ||||||    
T  26175660 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaatta 26175745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 33989991 - 33989893
Alignment:
Q  56 aatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaa 154  Q
    ||||||||||||||  |||||||||||||||||||||||||||  || || ||  || ||||||||| ||||| | |||||| |||||| ||| |||||    
T  33989991 aatgacctactctggtggagagattgatctctccaatccactattaacgagttatttacaaagagatacaaaaggattacaagaaattagcttcaacaa 33989893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 34570440 - 34570577
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatct 159  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| |||   |||||||| |||||| ||| |||||| ||     
T  34570440 acctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaattgggttacaagaaattagcttcaacaagttca 34570538  T
Q  160 tcaagcacaaatctaatttctacc-atttttccaatctc 197  Q
      ||| ||||  |||||||||||| ||||| ||||||||    
T  34570539 caaagaacaaccctaatttctacctattttcccaatctc 34570577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 38811173 - 38811235
Alignment:
Q  16 agaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagaga 78  Q
    ||||||||||| |||||||||||| | |||||||| |||||||||||||||||  ||||||||    
T  38811173 agaacaacaccgaagaattgtttacccagttcggtccaacaatgacctactcttggggagaga 38811235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 41964560 - 41964463
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-aggttacaataaattaactttaacaag 155  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||| ||| |||||  ||||||||||||||| ||| ||||||    
T  41964560 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagggatacaaaatgggttacaataaattagcttaaacaag 41964463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 4588090 - 4587970
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaa 170  Q
    ||||||||||| |||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| ||| |||||| |    ||| |||||    
T  4588090 gggagagattgttctctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagcttcaacaagcttacaaagaacaaa 4587992  T
Q  171 tc-taatttctaccatttttcc 191  Q
    || ||||||||||| |||||||    
T  4587991 tcttaatttctaccttttttcc 4587970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 12743949 - 12744045
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| | || |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| |||| |||||    
T  12743949 tgacctaatatgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagctttgacaag 12744045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 12745338 - 12745434
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| | || |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| |||| |||||    
T  12745338 tgacctaatatgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagctttgacaag 12745434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 12739574 - 12739713
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | ||  | |||| |||| ||||  |||||||| |||||| |||| ||||| |    
T  12739574 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcatacaaatagatacaaatgggttacaagaaattagctttgacaagtt 12739672  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  12739673 cacaaagaacaaccctaatttctatccattttcccaatctc 12739713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 26364380 - 26364241
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| ||||||||||||||||||||||||||||  |||| | || || ||||||||| ||||   ||||||| |||||| ||| |||||| |    
T  26364380 tgacctaatctgggggagagattgatctctccaatccactattaatg-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagtt 26364282  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  26364281 cacaaagaacaaccctaatttctacccattttcccaatctc 26364241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 5370107 - 5370197
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaacttt 149  Q
    ||||||||||||  ||||||||||||||||| | ||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| ||||    
T  5370107 tgacctactctggaggagagattgatctctctagtccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagcttt 5370197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 5429821 - 5429727
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||| | || || |||| |||| ||||  |||||||| |||||| ||| ||||||    
T  5429821 acctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaatagatacaaatgggttacaagaaattagcttcaacaag 5429727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 13992282 - 13992364
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||| ||||| | |||||||||| |||   ||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  13992282 acaccaaaga-ttgttcacctagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatga 13992364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 155
Target Start/End: Original strand, 21703830 - 21703956
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||| | ||||||||  |||||||||||||| || |||| |||||||| |||||||||||||  |||||| ||  || |||| |||| ||||    
T  21703830 aagaaatgtttacccagttcggtcaaacaatgacctactatg-gggatagattgatatctccaatccactgtcaatgagttctttacaaaaagatacaaa 21703928  T
Q  128 aaggttacaataaattaactttaacaag 155  Q
    |||| ||||| |||| | ||| ||||||    
T  21703929 aagggtacaagaaatcatcttcaacaag 21703956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 29999830 - 29999877
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  29999830 tgacctactctggaggagagattgatctctccaatccactatcaatga 29999877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 37754979 - 37755070
Alignment:
Q  53 aacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    |||||| ||||||| || ||||||||||||||||| ||| ||| || |||||| ||| ||  ||||||||  ||||||||||||| ||||||    
T  37754979 aacaattacctactatgggggagagattgatctcttcaaaccattatcaatgagttttttagaaagagataaaaaaaggttacaagaaatta 37755070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 47038435 - 47038482
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  47038435 tgacttactctgggggagagattgatctctccaatccactatcaatga 47038482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 5207866 - 5208003
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||||||||| | ||||||||||||| |||||||||||| ||||| | || || |||| ||||  | || |||| |||||||||| ||| |||||| |    
T  5207866 tgacctactctgggagagagattgatctttccaatccactatcaatg-agttcttacaaatagatatacaagggttgcaataaattagcttcaacaagtt 5207964  T
Q  158 cttcaagcacaaa-tctaatttctaccatttttccaatc 195  Q
    |   ||| |||||  |||||||||||| |||||||||||    
T  5207965 cacaaagaacaaaccctaatttctaccctttttccaatc 5208003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 24969238 - 24969117
Alignment:
Q  76 agattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaa 175  Q
    ||||| ||||||||||||||||| |||| | ||  || ||||||||| ||||   ||||||| |||||| ||| |||||| ||   ||| ||||||||||    
T  24969238 agatttatctctccaatccactatcaattagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaatctaa 24969140  T
Q  176 tttcta-ccatttttccaatctc 197  Q
    |||||| ||||||||||||||||    
T  24969139 tttctacccatttttccaatctc 24969117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 36463378 - 36463509
Alignment:
Q  21 aacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagag 120  Q
    ||||||||||| ||||| | | |||||||| ||||  ||||||| |||| |||||||||||||||||||||||||||  ||| | | || || |||||||    
T  36463378 aacaccaaaga-ttgttgacccagttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactgtcaaag-agttcttacaaagag 36463474  T
Q  121 atgcaaaaaggttacaataaattaactttaacaag 155  Q
    || ||||  |||||||| |||||| ||| ||||||    
T  36463475 atacaaatgggttacaagaaattagcttcaacaag 36463509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 6656100 - 6656004
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||   |||||||||||||||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| ||||||    
T  6656100 tgacctactctggatgagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaag 6656004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 12744087 - 12744167
Alignment:
Q  74 agagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| |||| |||||    
T  12744087 agagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagctttgacaag 12744167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 48893662 - 48893758
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||| | | || || ||||||||| ||||   ||||||| |||||| ||| ||||||    
T  48893662 tgacctaatctgggggagagattgatctctccaatccactatcaaag-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaag 48893758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 54883203 - 54883068
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||  ||||||| | | |||||||| ||||  |||| || ||||  ||||||||||||| ||||||||||||| ||||| | || || ||||    
T  54883203 aacaacaccaagaaattgttgacccagttcggtccaact-tgacttaatctggaggagagattgatccctccaatccactatcaatg-agttcttacaaa 54883106  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||| ||||  |||||||| |||||| ||| ||||||    
T  54883105 gagatacaaatgggttacaagaaattagcttcaacaag 54883068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 5871964 - 5871825
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||| ||||||||| ||| | | || || ||||| |||  |||  |||||||| |||||  ||| |||||| |    
T  5871964 tgacctaatctgggggagagattgatctctctaatccactatcaaag-agttcttgcaaagtgataaaaatgggttacaagaaatttgcttaaacaagct 5871866  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||| |||||||||| ||||||||||||||||    
T  5871865 cacaaagaacaaacctaatttctacccatttttccaatctc 5871825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 8648283 - 8648188
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaa 154  Q
    ||||||||||||  |||||||||||||||||||||||| || ||||| | || || ||||||||| ||||  ||||| || |||||| ||| |||||    
T  8648283 tgacctactctggaggagagattgatctctccaatccaatatcaatg-agttcttacaaagagatacaaatgggttataagaaattagcttcaacaa 8648188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 35662585 - 35662446
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||||||||   ||||| ||||||||||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| |||||  |    
T  35662585 tgacctactcttgaggagatattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaaact 35662487  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    | | ||| ||||  |||||||||| |||||||| |||||||    
T  35662486 cataaagaacaaccctaatttctacccattttttcaatctc 35662446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 36994655 - 36994572
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    |||||||||||||||||||||||||||| ||||| | || || ||||| ||| ||||  |||||||| |||||| ||| ||||||    
T  36994655 gggagagattgatctctccaatccactatcaatg-agttcttacaaagggatacaaatgggttacaagaaattagcttcaacaag 36994572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 41639570 - 41639530
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  41639570 tgacctactctggaggagagattgatctctccaatccacta 41639530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 197
Target Start/End: Original strand, 44967821 - 44967992
Alignment:
Q  26 caaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgca 125  Q
    ||||||| |||||| | || ||||| ||||| |||| || |||| |||||||||||||| ||| |||| |||  ||| || ||| || ||||||||| |     
T  44967821 caaagaaatgtttacccaggtcggtccaacagtgacttattctgggggagagattgatccctctaatctactctcaacgagttttttacaaagagatac- 44967919  T
Q  126 aaaaggttacaataaattaactttaacaagatcttcaagcac-aaatctaatttctaccatttttccaatctc 197  Q
    ||| |||||||| |||||  ||| | |||| ||| ||||  | ||| ||||||||||||||||| ||||||||    
T  44967920 aaatggttacaagaaattggcttcagcaagctctccaagagcaaaacctaatttctaccattttcccaatctc 44967992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 12747793 - 12747919
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaa 170  Q
    |||||||||||||||||||||||||||| ||||| | ||  | |||| |||| ||||  |||||||| |||||| |||| ||||| ||   ||| ||||     
T  12747793 gggagagattgatctctccaatccactatcaatg-agttcatacaaatagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaac 12747891  T
Q  171 tctaatttcta-ccatttttccaatctc 197  Q
     |||||||||| ||||||| ||||||||    
T  12747892 cctaatttctatccattttcccaatctc 12747919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 3913579 - 3913545
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||||||||||||||||||||| ||||||    
T  3913579 gggagagattgatctctccaatccactatcaatga 3913545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 12745476 - 12745545
Alignment:
Q  74 agagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    ||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| ||||||    
T  12745476 agagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaatta 12745545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 29254623 - 29254514
Alignment:
Q  73 gagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatc 172  Q
    |||||||||||||||||||||||||| ||| | | || || ||||||||  ||||  |||| ||| |||||||||| |||||| || | ||  |||| ||    
T  29254623 gagagattgatctctccaatccactatcaacg-agttcttacaaagagacacaaatgggttgcaagaaattaacttcaacaagctcataaaaaacaactc 29254525  T
Q  173 taatttctacc 183  Q
    |||||||||||    
T  29254524 taatttctacc 29254514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 34788854 - 34788928
Alignment:
Q  114 caaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttt 188  Q
    ||||||||| |||||  ||||||| |||||||||| |||||| ||| ||||  |||  |||||||||||||||||    
T  34788854 caaagagatacaaaagagttacaagaaattaacttcaacaagctctccaagagcaatcctaatttctaccatttt 34788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 51337208 - 51337123
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    ||||||| | ||||||||||||||||||||| ||| ||||| ||||| | || ||  |||||||| ||||| ||||| |||||||||    
T  51337208 tgacctaatgtgtgggagagattgatctctctaatacactatcaatg-agttcttaaaaagagatacaaaagggttataataaatta 51337123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 52467378 - 52467502
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||  |||||||||||||||||||||||||||| |||  || || || ||||| ||| ||||  |||||||| | |||| ||| |||||| |    
T  52467378 tgacctaatctcggggagagattgatctctccaatccactatcaa-aaagttattacaaagtgatacaaatgggttacaagatattagcttcaacaagct 52467476  T
Q  158 cttcaagcacaaatctaatttctacc 183  Q
    |   ||| ||||| ||||||||||||    
T  52467477 cacaaagaacaaacctaatttctacc 52467502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 6677597 - 6677482
Alignment:
Q  75 gagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaag--cacaaatc 172  Q
    |||||||||||||| |||||| || ||| || ||  || |||||| || ||||| |||||||| |||||| ||| |||||| ||| ||||   | ||| |    
T  6677597 gagattgatctctcaaatccattatcaaagacttctttacaaagatatacaaaagggttacaagaaattagcttcaacaagctctccaagaaaaaaaacc 6677498  T
Q  173 taatttctaccatttt 188  Q
    ||||||||||||||||    
T  6677497 taatttctaccatttt 6677482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 44570445 - 44570521
Alignment:
Q  114 caaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttc 190  Q
    ||||||||| |||||| ||||||| ||||||  || |||||| ||| |||  |||||  ||||||||||||||||||    
T  44570445 caaagagatacaaaaatgttacaagaaattagtttcaacaagctctccaacaacaaacataatttctaccatttttc 44570521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 220
Target Start/End: Original strand, 30218044 - 30218230
Alignment:
Q  34 tgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggtt 133  Q
    |||||| | ||||| || |||||||||| ||||||| ||||| ||||||||| | ||| |||||| |||||||||  || ||||||||| ||||| ||||    
T  30218044 tgtttaccgagttcagtccaacaatgacttactctgggggagtgattgatcttttcaacccactatcaatgaattatttacaaagagatacaaaatggtt 30218143  T
Q  134 acaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctccttccataaataagacactcaat 220  Q
    |||| |||||| ||| || ||| ||| |||| ||||| |||| |||||||  |||  |||||||||||||| || ||||||||||||    
T  30218144 acaagaaattagcttcaataagctctccaagaacaaacctaacttctacccatttctcaatctccttccatgaacaagacactcaat 30218230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 24398242 - 24398105
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||  ||||||| | | |||||||| ||||||||||||||| || ||||||||||||||||||||||||| || |||||| ||  || ||||    
T  24398242 aacaacaccaagtaattgttcagccagttcggtccaacaatgacctactatgggggagagattgatctctccaatccattatcaatgagttctttacaaa 24398143  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||| ||||| |||||||| |||||| ||| ||||||    
T  24398142 gagatacaaaagggttacaagaaattagcttcaacaag 24398105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 238
Target Start/End: Complemental strand, 33648340 - 33648135
Alignment:
Q  34 tgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggtt 133  Q
    |||||| | |||||||| ||||||||||||||||||  ||||||||||||||||||||||| ||| |||||| ||  || |||||| || ||||| ||||    
T  33648340 tgtttacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccgctatcaatgagttctttacaaagaaatacaaaagggtt 33648241  T
Q  134 acaataaattaactttaacaagatcttcaagcacaaa-tctaatttctaccatttttccaatctccttccataaataagacactcaatacttttcacttt 232  Q
    |||  |||||| ||| |||||| ||   ||| |||||  ||||||| |||||||||  |||||||||  |||  | ||||||||||||  |||||||| |    
T  33648240 acaggaaattagcttcaacaagctcacaaagaacaaaccctaatttttaccattttctcaatctcctctcatgtacaagacactcaattattttcactct 33648141  T
Q  233 cccaag 238  Q
    ||||||    
T  33648140 cccaag 33648135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 45727073 - 45726934
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||| ||||||||| |||||| ||| |||||| |    
T  45727073 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaataggttacaagaaattagcttcaacaagct 45726975  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| |||| ||||||||||| ||||||| ||||||||    
T  45726974 cacaaagaacaactctaatttctacccattttcccaatctc 45726934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 36318033 - 36318172
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||||||||  |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||||||||||  || |||||| |    
T  36318033 tgacctactctaagggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaataaattagtttcaacaagct 36318131  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||||||||||||    
T  36318132 cacaaagaacaaccctaatttctacccatttttccaatctc 36318172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 6595030 - 6595160
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||| | | || || ||||||||| ||||| |||||||| |||||| ||| |||||| |    
T  6595030 tgacctactctggaggagagattgatctctccaatccactatcaacg-agttcttacaaagagattcaaaagggttacaagaaattagcttcaacaagtt 6595128  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  ||||||||||||||||||    
T  6595129 cacaaagaacaaccctaatttctaccattttt 6595160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 28672097 - 28671978
Alignment:
Q  36 tttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttac 135  Q
    |||| ||| |||||| ||||||||||||||||||  ||||||||||||||||||||||||||  || ||| ||  ||  |||||||| ||||| ||| ||    
T  28672097 tttacctaattcggtccaacaatgacctactctggaggagagattgatctctccaatccactgtcagtgagttctttgtaaagagatacaaaacggtaac 28671998  T
Q  136 aataaattaactttaacaag 155  Q
    || |||||||| ||||||||    
T  28671997 aagaaattaaccttaacaag 28671978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 5723294 - 5723418
Alignment:
Q  72 ggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaat 171  Q
    ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||||||||||||| |||||| |||| ||||| ||   ||| ||||      
T  5723294 ggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaacaagc 5723392  T
Q  172 ctaatttctaccatttttccaatctc 197  Q
    |||||||||||| ||||  |||||||    
T  5723393 ctaatttctacccttttctcaatctc 5723418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 723768 - 723907
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||| ||| ||||  |||||||| |||||| ||| |||||| |    
T  723768 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagggatacaaatgggttacaagaaattagcttaaacaagct 723866  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||| |||||||||| ||| ||||||||||||    
T  723867 cacaaagaacaaacctaatttctacccagttttccaatctc 723907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 4503157 - 4503286
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||   ||||||||||| |||||  ||||||| |||||| |||| ||||| |    
T  4503157 tgacctactctggaggagagattgaactctccaatccactatcaatgagtt--cttcaaagagatacaaaagagttacaagaaattagctttgacaagtt 4503254  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  ||||||||||||||||||    
T  4503255 cacaaagaacaaccctaatttctaccattttt 4503286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 17450759 - 17450675
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||||||| ||||| | |||||||||| ||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  17450759 aacaacaccaaaga-ttgttcacctagttcggtccaact-tgacctactctgtgg-agagattgatctctccaatccactatcaatga 17450675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 30833490 - 30833360
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||  |   |||||||| ||||| |||||||| ||||||||||| ||||| |    
T  30833490 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattaactttgacaagtt 30833391  T
Q  158 cttcaagcacaaatctaatttctaccatttt 188  Q
    |   ||| ||||  |||||||||||| ||||    
T  30833390 cacaaagaacaaccctaatttctaccctttt 30833360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 1631756 - 1631895
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  |||||||||||| |||||||||||||| ||||| | || || ||||||||| ||||  |||||||| | |||| ||| |||||| |    
T  1631756 tgacctactctggaggagagattgatttctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagatattagcttcaacaagct 1631854  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||||||||||||    
T  1631855 cacaaagaacaatcctaatttctacccatttttccaatctc 1631895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 17057393 - 17057532
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| |||||| |    
T  17057393 tgacctagtctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgagttacaaaaaattagcttcaacaagct 17057491  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
        ||| ||||  |||||||||| ||||||||||||||||    
T  17057492 tgcaaagaacaaccctaatttctacccatttttccaatctc 17057532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 17085376 - 17085515
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| |||||| |    
T  17085376 tgacctagtctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgagttacaaaaaattagcttcaacaagct 17085474  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
        ||| ||||  |||||||||| ||||||||||||||||    
T  17085475 tgcaaagaacaaccctaatttctacccatttttccaatctc 17085515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 35446908 - 35447047
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||| ||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| ||||||  || ||||||||    
T  35446908 tgacctactctggaggagagagtgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagattcaacaagat 35447006  T
Q  158 cttcaagcacaaatctaatttctacc-atttttccaatctc 197  Q
    |   ||| ||||  |||||||||||| ||||| ||||||||    
T  35447007 cacaaagaacaaccctaatttctaccaattttaccaatctc 35447047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 42362496 - 42362357
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| ||||||||| |||||||||||||||||| ||||| | || || ||||| ||| ||||  |||||||| |||||| ||| |||||| |    
T  42362496 tgacctaatctgggggagagatagatctctccaatccactatcaatg-agttcttacaaagggatacaaatgggttacaagaaattagcttaaacaagct 42362398  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||| |||||||||| ||||||| ||||||||    
T  42362397 cacaaagaacaaacctaatttctacccattttcccaatctc 42362357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 45099898 - 45099769
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||   ||||||||||| |||||  ||||||| |||||| |||| ||||| |    
T  45099898 tgacctactctggaggagagattgaactctccaatccactatcaatgagtt--cttcaaagagatacaaaagagttacaagaaattagctttgacaagtt 45099801  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  |||||||||||| |||||    
T  45099800 cacaaagaacaaccctaatttctacccttttt 45099769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 4484354 - 4484484
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||  |   |||||||| ||||| |||||||| |||||| |||| ||||| |    
T  4484354 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattagctttgacaagtt 4484453  T
Q  158 cttcaagcacaaatctaatttctaccatttt 188  Q
    |   ||| ||||  |||||||||||| ||||    
T  4484454 cacaaagaacaaccctaatttctaccctttt 4484484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 36988100 - 36988185
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||||  ||||||| ||||||    
T  36988100 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagagttacaagaaatta 36988185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 2334442 - 2334538
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||||  ||||| | |||||| ||| ||||||    
T  2334442 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagagttactagaaattagcttcaacaag 2334538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 11690679 - 11690506
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||| ||| |||||||| ||||  |||| || | || ||||||| |||||||||||||||||||| ||| | |||| || ||||| ||    
T  11690679 acaccaaaga-ttgttgatccagttcggtccaact-tgacgtaatatgggggagaggttgatctctccaatccactatcaacg-atttcttacaaaggga 11690583  T
Q  122 tgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    | ||||  |||||||| |||||| ||| |||||| ||   ||| ||||| |||||||||| ||||||| ||||||||    
T  11690582 tacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattttcccaatctc 11690506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 29868013 - 29867874
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| | || |||||||||||||||||||||||||||| ||| | | || || ||||||||| ||||  |||||||| |||||| |||| ||||| |    
T  29868013 tgacctaatttgggggagagattgatctctccaatccactatcaaag-agttcttacaaagagatacaaatgggttacaagaaattagctttgacaagtt 29867915  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  29867914 cacaaagaacaaccctaatttctacccattttcccaatctc 29867874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 42019864 - 42020035
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgttt--caaagagatgca 125  Q
    ||||| |||||||| | || ||| ||||||| ||||||| || || ||||||||||||||| ||| ||||| |||||| ||| |||  ||||||||| ||    
T  42019864 aagaagtgtttatccaatttggtccaacaataacctactatggggaagagattgatctctcaaattcactatcaatgagttttttttacaaagagataca 42019963  T
Q  126 aaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    |||  ||||||| |||||| |||  ||||| | |  ||| |||||  ||| ||||||| |||||| ||||||    
T  42019964 aaagagttacaagaaattagcttctacaagctttataagaacaaacataaattctaccctttttctaatctc 42020035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 155
Target Start/End: Original strand, 17490143 - 17490268
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||| | |||||||| ||| | |||||||||||  ||||||||||||||||| |||||||||| ||||| | || || ||||||| | ||||    
T  17490143 aagaaatgtttacccagttcggtccaa-attgacctactctaggggagagattgatctctacaatccactatcaatg-agttcttacaaagagttacaaa 17490240  T
Q  128 aaggttacaataaattaactttaacaag 155  Q
    |  ||||||| |||||| ||| ||||||    
T  17490241 agagttacaagaaattagcttcaacaag 17490268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 34139794 - 34139841
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  34139794 tgacctaatctgggggagagattgatctctccaatccactatcaatga 34139841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 39284980 - 39284933
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  39284980 tgacctaatctgggggagagattgatctctccaatccactatcaatga 39284933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 36205689 - 36205820
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||| ||||||| ||||||||||| ||  |||||| ||   ||||||||||| |||||  ||||||| |||||| |||| ||||| |    
T  36205689 tgacctactctggaggatagattgaactctccaatccgctgtcaatgagtt--cttcaaagagatacaaaagagttacaagaaattagctttgacaagtt 36205786  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  ||||||||||||||||||||    
T  36205787 cacaaagaacaaccctaatttctaccatttttcc 36205820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 11067449 - 11067313
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| ||||||||||||||||| ||||||| ||  |||| | || || ||||||||| ||||  |||||||| |||||| |||| ||||| |    
T  11067449 tgacctaatctgggggagagattgatctcttcaatccattataaatg-agttcttacaaagagatacaaatgggttacaagaaattagctttgacaagct 11067351  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaat 194  Q
    |   ||| ||||  |||||||||| |||||||||||||    
T  11067350 cacaaagtacaacactaatttctacccatttttccaat 11067313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 11151615 - 11151739
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| ||||||| |||||||||||||||||||| | | | | || || ||||| ||| ||||  |||||||| |||||| ||| |||||| |    
T  11151615 tgacctaatctgggggagaggttgatctctccaatccactatctaag-agttcttacaaagtgatacaaatgggttacaagaaattagcttaaacaagct 11151713  T
Q  158 cttcaagcacaaatctaatttctacc 183  Q
    |   ||| ||||||||||||||||||    
T  11151714 cacaaagaacaaatctaatttctacc 11151739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 33162440 - 33162570
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||| | |||||||||| ||||  ||||||| |||  |||||||||||||||||| ||||||||| ||||| | || || || |||||    
T  33162440 acaccaaaga-ttgttgacctagttcggtccaact-tgacctaatctaggggagagattgatctctctaatccactatcaatg-agttcttacagagaga 33162536  T
Q  122 tgcaaaaaggttacaataaattaactttaacaag 155  Q
    | ||||  |||||||| |||||| ||| ||||||    
T  33162537 tacaaatgggttacaagaaattagcttcaacaag 33162570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 42412161 - 42412117
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaat 103  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  42412161 tgacctactctg-gggagagattgatctctccaatccactatcaat 42412117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 14633849 - 14633889
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  14633849 tgacctaatctgggggagagattgatctctccaatccacta 14633889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 38312376 - 38312245
Alignment:
Q  66 tctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagc 165  Q
    |||| |||||||||||||||||||||||||||| ||||| |  | || ||||||||| ||||  |||||||| ||||||  || |||||| ||   |||     
T  38312376 tctgggggagagattgatctctccaatccactatcaatg-agatcttacaaagagatacaaatgggttacaagaaattagtttcaacaagttcacaaaga 38312278  T
Q  166 acaaatctaatttcta-ccatttttccaatctc 197  Q
    ||||  |||||||||| ||||||| ||||||||    
T  38312277 acaaccctaatttctacccattttcccaatctc 38312245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 26353328 - 26353281
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||||  |||||||| ||||||||||||||||||| ||||||    
T  26353328 tgacctactctaagggagagagtgatctctccaatccactatcaatga 26353281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 36773698 - 36773610
Alignment:
Q  66 tctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    |||| |||||||||||||||||||||||||||| ||| | | || || ||||||||| ||||   ||||||| |||||| ||| ||||||    
T  36773698 tctgggggagagattgatctctccaatccactatcaaag-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaag 36773610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 42288135 - 42288230
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| ||||||||||||||||||||||||| || ||||||  |  || |||||| || ||||  ||||||||||||||| ||| ||||||    
T  42288135 tgacctaatctg-gggagagattgatctctccaatccattatcaatgagctc-ttacaaagaaatacaaatgggttacaataaattagcttcaacaag 42288230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 34256531 - 34256669
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||||||||   ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| ||||||||||| ||||| |    
T  34256531 tgacctactctagaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattaactttgacaagtt 34256629  T
Q  158 cttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    |   ||| ||||  ||||||||||||||||||||||||||    
T  34256630 cacaaagaacaaccctaatttctaccatttttccaatctc 34256669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 7597781 - 7597647
Alignment:
Q  36 tttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttac 135  Q
    |||||| ||||||||  |||||||||||||| || |||||||||||||||||||||||||||| ||||| |||  || ||||||||| ||||| | |||     
T  7597781 tttatccagttcggtctaacaatgacctactatgggggagagattgatctctccaatccactatcaatgcattctttacaaagagatacaaaaggattat 7597682  T
Q  136 aataaattaactttaacaagatcttcaagcacaaa 170  Q
    || |||||| ||| |||||| ||| |||| |||||    
T  7597681 aagaaattagcttcaacaagctctccaagaacaaa 7597647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 34254355 - 34254493
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||||||||   ||||||||||||||||||||||||||| |||| || || || ||||||||| ||||| |||||||| ||||||||||| ||||| |    
T  34254355 tgacctactctagaggagagattgatctctccaatccactatcaat-aagttcttacaaagagatacaaaagggttacaagaaattaactttgacaagtt 34254453  T
Q  158 cttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||||| |||| ||||||||    
T  34254454 cacaaagaacaaccctaatttctacccttttcccaatctc 34254493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 17982797 - 17982667
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| ||||||||||| ||||| |    
T  17982797 tgacctactctggaggagagattgaactctccaatccactatcaatg-agttcttccaaagagatacaaaagggttacaagaaattaactttgacaagtt 17982699  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  |||||||||||| |||||    
T  17982698 cacaaagaacaaccctaatttctacccttttt 17982667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 32902191 - 32902292
Alignment:
Q  52 caacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaa 151  Q
    |||||||||||||||| | |||||||||||||||||| ||| ||||| |||||||||  ||  |||||||| |||||| ||||||| |||||| ||| ||    
T  32902191 caacaatgacctactcagggggagagattgatctctcaaattcactatcaatgaattctttagaaagagatacaaaaaagttacaagaaattagcttcaa 32902290  T
Q  152 ca 153  Q
    ||    
T  32902291 ca 32902292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 42435015 - 42435154
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  |||||||||||| |||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  42435015 tgacctactctggaggagagattgatttctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagct 42435113  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||||||||||||    
T  42435114 cacaaagaacaaccctaatttctacccatttttccaatctc 42435154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 11712018 - 11712121
Alignment:
Q  52 caacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaa 151  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||| |||||| ||  || |||||||||  |||| |||| ||| |||||| ||| ||    
T  11712018 caacaatgacctactttgagggagagattgatctcttcaatccactatcaatgagttatttacaaagagatataaaagggtttcaagaaattagcttcaa 11712117  T
Q  152 caag 155  Q
    ||||    
T  11712118 caag 11712121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 31218401 - 31218271
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||| ||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  31218401 tgacctactctggaggagagattgaactctctaatccactatcaatg-agttcttccaaagagatacaaaagggttacaagaaattagctttgacaagtt 31218303  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  ||||||||||||||||||    
T  31218302 cacaaagaacaaccctaatttctaccattttt 31218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 42498338 - 42498208
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || |||||| || ||||| |||||||| |||||| ||| |||||| |    
T  42498338 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagaaatacaaaagggttacaagaaattagcttcaacaagtt 42498240  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  |||||||||||| |||||    
T  42498239 cacaaagaacaaccctaatttctacctttttt 42498208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 5689407 - 5689244
Alignment:
Q  66 tctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagc 165  Q
    |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| |||| ||||| ||   ||||    
T  5689407 tctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaagc 5689309  T
Q  166 acaaatctaatttcta-ccatttttccaatctccttccataaataagacactcaatacttttcact 230  Q
    || |   ||||||||| |||||||||||||||| ||  || || ||||||||||||  ||||||||    
T  5689308 accaccttaatttctacccatttttccaatctcatt-aatgaacaagacactcaatgattttcact 5689244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 29796320 - 29796457
Alignment:
Q  34 tgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgttt-caaagagatgcaaaaaggt 132  Q
    |||||| | |||||||| ||||||||||||||  || ||||||||||||||||||||||||| ||  ||||| ||| ||| |||| || | |||||| ||    
T  29796320 tgtttaccaagttcggtccaacaatgacctacattgggggagagattgatctctccaatccattataaatgagtttttttacaaataggtacaaaaatgt 29796419  T
Q  133 tacaataaattaactttaacaagatcttcaagcacaaa 170  Q
    ||||| |||| | ||| |||||| ||| |||| |||||    
T  29796420 tacaagaaatcagcttcaacaagttctccaagaacaaa 29796457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 40321224 - 40321128
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||| || ||| || ||||||||| | ||  |||||||| |||||||||| ||||||    
T  40321224 tgacctaatctgggggagagattgatctctccaatccactatcaaagagttt-ttacaaagagatactaatgggttacaagaaattaacttcaacaag 40321128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 1746243 - 1746372
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||| ||  ||||||||||| ||||||||||||||| |||||| ||   ||||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  1746243 tgacctactatggaggagagattgaactctccaatccactatcaatgagtt--cttcaaagagatacaaaagggttacaagaaattagctttgacaagtt 1746340  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  |||||||||||| |||||    
T  1746341 cacaaagaacaaccctaatttctacctttttt 1746372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 15212930 - 15212791
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| ||||||||||||||||||||||||| || ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  15212930 tgacctaatctgggggagagattgatctctccaatccattatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagtt 15212832  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  15212831 cacaaagaacaaccctaatttctacccattttcccaatctc 15212791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 30143476 - 30143346
Alignment:
Q  66 tctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagc 165  Q
    |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| ||   |||     
T  30143476 tctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaga 30143378  T
Q  166 acaaatctaatttcta-ccatttttccaatct 196  Q
    ||||  |||||||||| ||||||| |||||||    
T  30143377 acaaccctaatttctacccattttcccaatct 30143346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 197
Target Start/End: Complemental strand, 40328922 - 40328784
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaag-gttacaataaattaactttaacaagatc 158  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||| | ||||||| ||||||  || |||||| ||    
T  40328922 acctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaatgagttacaagaaattagtttaaacaagctc 40328824  T
Q  159 ttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
       ||| ||||| |||||||||| ||||||| ||||||||    
T  40328823 acaaagaacaaacctaatttctacccattttcccaatctc 40328784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 10930184 - 10930269
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatg 104  Q
    |||||||||||  ||||||| | | |||||||| ||||  ||||||| |||| |||||||||||||||||||||||||||| |||||    
T  10930184 aacaacaccaagaaattgttgacccagttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatg 10930269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 33352294 - 33352209
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| ||||||    
T  33352294 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaatta 33352209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 11137209 - 11137031
Alignment:
Q  18 aacaacaccaaagaattgtttatct-agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgttt--- 113  Q
    ||||||| ||||||||| |||| || |||||||| ||||||||||||||| || ||  ||     || |||||||| ||||| |||||| ||| |||       
T  11137209 aacaacatcaaagaattctttaccttagttcggtccaacaatgacctactatgaggagga-----atatctccaattcactatcaatgagttttttttta 11137115  T
Q  114 caaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    ||||||||| ||||| ||||| || |||||| ||| |||||| |||||||| ||| |  ||||||||||||||||  |||||||    
T  11137114 caaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcaatctc 11137031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 3303660 - 3303833
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||||| | |||||||| ||||  ||||||||| || ||||||||||||||||| |||||||||| ||||| | || || ||||||||    
T  3303660 acaccaaaga-ttgtttacccagttcggtccaact-tgacctactgtgggggagagattgatctcttcaatccactatcaatg-agttcttacaaagaga 3303756  T
Q  122 tgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    | ||||   ||||||| ||||||  || |||||| ||   ||| |||||  ||||||||| ||||||| ||||||||    
T  3303757 tacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaacttaatttctacccattttcccaatctc 3303833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 9633592 - 9633652
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagaga 78  Q
    ||||||||||||||||||||||   |||||||| ||||||||||||||| ||||| |||||    
T  9633592 aacaacaccaaagaattgtttacacagttcggtccaacaatgacctactatgtggaagaga 9633652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 27811422 - 27811283
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| ||||||||||||||||| |||||||||| |||||   || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  27811422 tgacctaatctgggggagagattgatctcttcaatccactatcaatg-ggttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagct 27811324  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  27811323 cacaaagaacaaccctaatttctacccattttcccaatctc 27811283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 40221889 - 40221750
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||| | | || || ||||||||| ||||  |||||||| ||||||  || |||||| |    
T  40221889 tgacctaatctgggggagagattgatctctccaatccactatcaacg-agttcttacaaagagatacaaatgggttacaagaaattagtttcaacaagct 40221791  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  40221790 cacaaagaacaaccctaatttctacccattttaccaatctc 40221750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 4743238 - 4743285
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||||    
T  4743238 tgacctactttgggggagagattgatctctccaatccactatcaatga 4743285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 12702658 - 12702788
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||  ||||||||||||||||||||||||| || ||||| | || || ||||||||  ||||| |||||||| |||||| ||| |||||| |    
T  12702658 tgacctaatctaggggagagattgatctctccaatccaatatcaatg-agttcttacaaagagacacaaaagggttacaagaaattagcttcaacaagtt 12702756  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  |||||||||||| |||||    
T  12702757 cacaaagaacaaccctaatttctacccttttt 12702788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 1345395 - 1345480
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    |||||||||||| |||||||||||| |||| |||||||||| ||||| | || |||||||||||| || |  |||||||| ||||||    
T  1345395 tgacctactctgggggagagattgaactcttcaatccactatcaatg-agttctttcaaagagatacatatgggttacaagaaatta 1345480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 4733850 - 4733800
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatt 108  Q
    ||||||| |||| ||||||||| |||||||||||||||||| |||||||||    
T  4733850 tgacctaatctgggggagagatcgatctctccaatccactatcaatgaatt 4733800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 4283668 - 4283572
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    |||||||||||   || |||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  4283668 tgacctactctagaggggagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 4283572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 18655544 - 18655448
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||| ||  ||||||||||||||||| ||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  18655544 tgacctactttggaggagagattgatctctctaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 18655448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 44303999 - 44303903
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | || ||  |||||||| ||||| | |||||| |||||| |||| |||||    
T  44303999 tgacctactctggaggagagattgaactctccaatccactatcaatg-agttcttaaaaagagatacaaaaggattacaagaaattagctttgacaag 44303903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 2627880 - 2627833
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  2627880 tgacctactctggaggagagattgaactctccaatccactatcaatga 2627833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 8153902 - 8153855
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||||| || |||||||||||||||||||| |||| ||||||    
T  8153902 tgacctactctgaggaagagattgatctctccaatcaactatcaatga 8153855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 3772336 - 3772286
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatt 108  Q
    |||||||||||| | || ||||||||||||||||||||||| |||| ||||    
T  3772336 tgacctactctgagagatagattgatctctccaatccactatcaataaatt 3772286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 4731794 - 4731717
Alignment:
Q  66 tctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    |||| ||||||||| |||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| ||||||    
T  4731794 tctgggggagagatcgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaatta 4731717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 19491698 - 19491862
Alignment:
Q  32 attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaagg 131  Q
    |||||| | |||||||||| ||| | ||||||||| || |||||| ||||||||||  ||||||||| ||| || ||  || ||||||||| ||||  ||    
T  19491698 attgttgacctagttcggtccaata-tgacctactatgggggagatattgatctctttaatccactatcaacgagttc-ttacaaagagatacaaatggg 19491795  T
Q  132 ttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |||||| ||||||  || |||||| ||   ||| ||||| |||||||||| ||||||| ||||||||    
T  19491796 ttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctc 19491862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 19945383 - 19945480
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-aggttacaataaattaactttaacaag 155  Q
    |||||||||||   ||||||||||| ||||||||||||||| ||||| | || || ||||||||| |||||  |||||||| |||||| |||| |||||    
T  19945383 tgacctactctcgaggagagattgaactctccaatccactatcaatg-agttcttccaaagagatacaaaagtggttacaagaaattagctttgacaag 19945480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 3073898 - 3073981
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatt 143  Q
    ||||||||| || ||||||||||||||||||||| ||| || ||||| | || || ||||||||| |||||| ||||||| |||||    
T  3073898 tgacctactatg-gggagagattgatctctccaagccattatcaatg-agttcttacaaagagatacaaaaatgttacaagaaatt 3073981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 183
Target Start/End: Complemental strand, 4162640 - 4162517
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||||||||  ||||||||||||| |||||||||| ||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| |||||| |    
T  4162640 tgacctactcttggggagagattgatatctccaatcc-ctatcaatg-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagtt 4162543  T
Q  158 cttcaagcacaaatctaatttctacc 183  Q
    ||  ||| ||||| |||| |||||||    
T  4162542 ctcaaagaacaaacctaacttctacc 4162517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 18141964 - 18141868
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||  |||||||||||||||||||||||||||| ||| | | || || ||||| ||| ||||  |||||||| |||||| ||| ||||||    
T  18141964 tgacctaatctaggggagagattgatctctccaatccactatcaaag-agttcttacaaagtgatacaaatgggttacaagaaattagcttcaacaag 18141868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 30291738 - 30291701
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatt 108  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  30291738 gggagagattgatctctccaatccactatcaaagaatt 30291701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 3439683 - 3439607
Alignment:
Q  23 caccaaaga-attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||||| |||||| ||| |||||||| |||   ||||||||||||  ||||||||||  |||||||||||||||    
T  3439683 caccaaagagattgttcatccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccacta 3439607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 8965715 - 8965854
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| | || |||||||||| |||||||| || ||||| |||||| ||  || |||||||||  |||| ||||| || |||||||||| |||||  |    
T  8965715 tgacctaatatgggggagagatttatctctccgatgcactatcaatgagttc-ttacaaagagatataaaagggttataagaaattaacttcaacaaact 8965813  T
Q  158 cttcaagcacaaatc-taatttctaccatttttccaatctc 197  Q
    | | ||| ||||| | ||||||||||| |||| ||||||||    
T  8965814 cataaagaacaaaccctaatttctacctttttcccaatctc 8965854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 41366651 - 41366734
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||||||||||||||||||  |||| | || || ||||| ||| |||| |||||| || |||||| ||| ||||||    
T  41366651 gggagagattgatctctccaatccactataaatg-agttcttacaaagggatacaaataggttaaaagaaattagcttaaacaag 41366734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 46173540 - 46173371
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||  ||||||| |||||||||||| ||||  ||||||| |||| |||||||||||||||||||||||||||| ||||||| || || ||||    
T  46173540 aacaacaccaagaaattgttgatctagttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgaa-ttcttacaaa 46173443  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccattttt 189  Q
    ||||| ||||  |||||||| |||||| ||| |||||| ||   ||| ||||  ||||||||||||| ||||    
T  46173442 gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctaccaatttt 46173371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 20937842 - 20937639
Alignment:
Q  16 agaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttca 115  Q
    ||||| |||| ||| ||||||||| ||||||| || |||| ||||| |||| || ||||  ||||||||||||||||| | || |||||| ||  |||||    
T  20937842 agaaccacacaaaataattgtttacctagttctgtccaactatgacatactttgggggaacgattgatctctccaatcta-tatcaatgagttcttttca 20937744  T
Q  116 aagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctccttccataaataagacac 215  Q
    ||||||| ||||| |||||||| |||||||||| |||||| ||| |||  |||||  |||||||||||  |||||| ||||| ||| || || |||| ||    
T  20937743 aagagatacaaaagggttacaagaaattaacttcaacaagctctccaaaaacaaacataatttctacctattttccgatctctttctatgaacaagagac 20937644  T
Q  216 tcaat 220  Q
    |||||    
T  20937643 tcaat 20937639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 30236308 - 30236130
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||  ||||||| | |||||||||| ||||  ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||    
T  30236308 aacaacaccaagaaattgttgacctagttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaa 30236211  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    ||||| |||| ||||||||| |||||| ||| |||||| ||   ||| ||||  |||||||||| ||||||| ||||||||    
T  30236210 gagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctc 30236130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 46860657 - 46860494
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||| ||| ||| ||| | |||||| ||||||||||||||||||  ||| ||||||||||||||||||||||| ||||| | || || ||||    
T  46860657 aacaacaccaaaaaat-gttcatccaattcggtccaacaatgacctactctggaggaaagattgatctctccaatccactatcaatg-agttattacaaa 46860560  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctacc 183  Q
    ||||| ||||  |||||||| |||||| ||| |||||| ||   ||| ||||| ||||||||||||    
T  46860559 gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacc 46860494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 45095307 - 45095169
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||||||||   ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  45095307 tgacctactctagaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagctttgacaagtt 45095209  T
Q  158 cttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    |   ||| ||||  ||||||||||||||||| ||||||||    
T  45095208 cacaaagaacaaccctaatttctaccattttcccaatctc 45095169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 55301981 - 55302079
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaat 142  Q
    |||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||| || || ||||||||| |||| ||||||||| ||||    
T  55301981 agttcggtccaacaatgacctactatggaggagagattgatctctccaatccactatcaatgaa-ttcttacaaagagatacaaataggttacaagaaat 55302079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 238
Target Start/End: Original strand, 35138700 - 35138909
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| ||||||||   |||||| ||||||||||||||| | |||| ||||||| ||||| | |||||||| |||||| ||  || ||||||||| ||||    
T  35138700 aagaaatgtttatccgattcggttcaacaatgacctacttt-tgggggagattgttctcttccatccactatcaatgagttctttacaaagagatacaaa 35138798  T
Q  128 aaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctccttccataaataagacactcaatacttttc 227  Q
    |  ||| ||| |||||||||| |||||  ||  |||| |||||  |||||||||||  |||  ||||||| |||||| || ||||||||||||  |||||    
T  35138799 agagttgcaagaaattaacttcaacaaactcaccaagaacaaacataatttctacccatttctcaatctctttccatgaacaagacactcaatgattttc 35138898  T
Q  228 actttcccaag 238  Q
    ||| |||||||    
T  35138899 actctcccaag 35138909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 197
Target Start/End: Original strand, 4055773 - 4055926
Alignment:
Q  43 agttcggtacaacaatgacctac-tctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-aggttacaataa 140  Q
    |||||||  |||||||||||||| |||| ||||||||  ||||||| |||||||||| |||||| ||| || ||||||||| ||||| ||||||||| ||    
T  4055773 agttcggcccaacaatgacctacatctgggggagaga--gatctcttcaatccactatcaatgagtttcttacaaagagatacaaaagaggttacaagaa 4055870  T
Q  141 attaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    ||||||||| ||||| ||| |||| || || ||||||||||||  ||| ||||||||    
T  4055871 attaacttttacaagttctccaagaac-aacctaatttctacccatttcccaatctc 4055926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 197
Target Start/End: Complemental strand, 29813221 - 29813068
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaat 142  Q
    |||||||| ||||| ||||| | |||| ||||||||||||||||||||||||||||  |||| | || || ||||||||||||||  |||||||| ||||    
T  29813221 agttcggtccaaca-tgaccaaatctgggggagagattgatctctccaatccactataaatg-agttcttacaaagagatgcaaatgggttacaagaaat 29813124  T
Q  143 taactttaacaagatcttcaagcacaaatctaatttctacc-atttttccaatctc 197  Q
    || ||| |||||| ||   ||| ||||  |||||||||||| ||||||||||||||    
T  29813123 tagcttcaacaagttcacaaagaacaaccctaatttctacctatttttccaatctc 29813068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 26323053 - 26323255
Alignment:
Q  16 agaacaacaccaaagaattgtttatctagttcggtacaacaatgacctactct-gtgggagagat-tgatctctccaatccactaccaatgaatttgttt 113  Q
    |||| ||||||||||||||||||| | | |||||| ||||||||||||||||| | |||| | ||  ||| |||||| | ||||| |||||| ||| ||     
T  26323053 agaataacaccaaagaattgtttacccacttcggtccaacaatgacctactctagggggataaataagatatctccacttcactatcaatgagtttttta 26323152  T
Q  114 caaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctccttccataaataagac 213  Q
    | |||| || |||||||||||||| |||||| ||| |||||  |||||||  ||||| ||||||| |||| ||||  ||||||| | |||| || |||||    
T  26323153 ccaagatatacaaaaaggttacaagaaattagcttcaacaaactcttcaaaaacaaacctaatttttacccttttctcaatctcatcccatgaacaagac 26323252  T
Q  214 act 216  Q
    |||    
T  26323253 act 26323255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 230
Target Start/End: Complemental strand, 7762409 - 7762238
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||||  ||||||| |||||| ||| |||||| |    
T  7762409 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagagttacaagaaattagcttcaacaagtt 7762311  T
Q  158 cttcaagcacaaatctaatttctaccatttttc-caatctccttccataaataagacactcaatacttttcact 230  Q
    |   ||| ||||  |||||||||||| |||||| |||||| |  | || |||||||||||||||  ||||||||    
T  7762310 cacaaagaacaaccctaatttctaccctttttctcaatct-caccaatgaataagacactcaatgattttcact 7762238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 23200162 - 23200294
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||| ||||| |||||| ||  || |||| |||| ||||| |||||||| |||||| |||| ||||| |    
T  23200162 tgacctactctggaggagagattgaactctccaattcactatcaatgagttc-ttacaaaaagatacaaaagggttacaagaaattagctttgacaagtt 23200260  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| |||| |||||||||||||||||||||    
T  23200261 cacaaagaacaactctaatttctaccatttttcc 23200294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 37408602 - 37408470
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  |||||||||||||||| |||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  37408602 tgacctactctggaggagagattgatctcttcaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagctttgacaagtt 37408504  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  |||||||||||| |||||||    
T  37408503 cacaaagaacaaccctaatttctaccctttttcc 37408470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 40735527 - 40735431
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  ||||||||||||||| ||| ||||||    
T  40735527 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaactggttacaataaattagcttcaacaag 40735431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 19683913 - 19684052
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||| ||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  19683913 tgacctactatggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagctttgacaagtt 19684011  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  19684012 cacaaagaacaaccctaatttctacccattttcccaatctc 19684052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 29811012 - 29810889
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  29811012 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagtt 29810914  T
Q  158 cttcaagcacaaatctaatttctac 182  Q
    |   ||| |||| ||||||||||||    
T  29810913 cacaaagaacaactctaatttctac 29810889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 6095623 - 6095712
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactt 148  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| ||||||||||    
T  6095623 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattaactt 6095712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 7764608 - 7764479
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||| ||||||||||||||||| ||||| | || || ||||||||| |||||  ||||||| |||||| |||||||||| |    
T  7764608 tgacctactctggaggagagattcatctctccaatccactatcaatg-agttcttacaaagagatacaaaagagttacaagaaattagctttaacaagtt 7764510  T
Q  158 cttcaagcacaaatctaatttctaccatttt 188  Q
    |   ||| ||||  |||||||||||| ||||    
T  7764509 cacaaagaacaaccctaatttctaccctttt 7764479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 23197963 - 23198095
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||| ||||| ||||| | || || |||| |||| ||||| |||||||| |||||| |||| ||||| |    
T  23197963 tgacctactctggaggagagattgaactctccaattcactatcaatg-agttcttacaaaaagatacaaaagggttacaagaaattagctttgacaagtt 23198061  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||  |||| |||||||||||||||||||||    
T  23198062 cacaaaaaacaactctaatttctaccatttttcc 23198095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 54593848 - 54593752
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    |||| |||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  ||||||||||||||| ||| ||||||    
T  54593848 tgacatactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaataaattagcttcaacaag 54593752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 760991 - 760852
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||| ||| ||||  |||||||| |||||| ||| |||||| |    
T  760991 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagggatacaaatgggttacaagaaattagcttaaacaagct 760893  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||| | |||||||||| ||||||| ||||||||    
T  760892 cacaaagaacagacctaatttctacccattttcccaatctc 760852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 34491356 - 34491217
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| |||||| |    
T  34491356 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagct 34491258  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  34491257 cacaaagaacaaccctaatttctacccattttcccaatctc 34491217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 4075480 - 4075592
Alignment:
Q  43 agttcggtacaacaatgacctac-tctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-aggttacaataa 140  Q
    |||||||  |||||||||||||| |||| |||||||  ||||||||||||||||||| ||| || ||| || ||||| ||| ||||| ||||||||| ||    
T  4075480 agttcggcccaacaatgacctacatctgggggagag--tgatctctccaatccactatcaaagagtttcttacaaagtgatacaaaagaggttacaagaa 4075577  T
Q  141 attaactttaacaag 155  Q
    ||||||||| |||||    
T  4075578 attaacttttacaag 4075592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 5258168 - 5258298
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  | ||||||||| ||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  5258168 tgacctactctggagaagagattgaactctccaatccactatcaatg-agttcttccaaagagatacaaaagggttacaagaaattagctttgacaagtt 5258266  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  |||||||||||| |||||    
T  5258267 cacaaagaacaaccctaatttctacccttttt 5258298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 22835040 - 22835165
Alignment:
Q  72 ggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaat 171  Q
    ||||||||||||||||||||||||||| ||||| | || || ||||| ||| ||||  |||||||| |||||| ||| |||||| ||   ||| |||||     
T  22835040 ggagagattgatctctccaatccactatcaatg-agttcttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaac 22835138  T
Q  172 ctaatttcta-ccatttttccaatctc 197  Q
    |||||||||| ||||||| ||||||||    
T  22835139 ctaatttctacccattttcccaatctc 22835165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 43403753 - 43403815
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||| |||| |||||||||||||  ||||||||| ||||||||||||||||| ||||||    
T  43403753 agttcggtccaaccatgacctactctggaggagagattaatctctccaatccactatcaatga 43403815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 49199453 - 49199590
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||   |||||| | | |||||||| |||| |||||||| ||||  ||||||||| ||||||||||||||||| ||||| | || || ||||    
T  49199453 aacaacaccaagagattgttcacccagttcggtccaaccatgacctagtctggaggagagattaatctctccaatccactatcaatg-agttcttacaaa 49199551  T
Q  118 gagatgcaaaa-aggttacaataaattaactttaacaag 155  Q
    ||||| |||||  |||||||| |||||| ||| ||||||    
T  49199552 gagatacaaaatgggttacaagaaattagcttcaacaag 49199590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 53921498 - 53921666
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||||| ||||||||  |||  ||| |||||| | |||||||||||||||||||||||||||| ||||| | || || ||||  ||| ||||    
T  53921498 aagaaatgtttatccagttcggtcaaact-tgatctactccgggggagagattgatctctccaatccactatcaatg-agttcttacaaaatgatacaaa 53921595  T
Q  128 aaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
       ||||||| |||||| |||||||||| ||   ||  ||||| |||||||||| ||||||||||||||||    
T  53921596 tgagttacaagaaattagctttaacaagctcacaaacaacaaacctaatttctacccatttttccaatctc 53921666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 183
Target Start/End: Complemental strand, 9581426 - 9581302
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||| ||| ||||  ||||| || |||||| ||| |||||| |    
T  9581426 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagggatacaaatgggttaaaagaaattagcttaaacaagct 9581328  T
Q  158 cttcaagcacaaatctaatttctacc 183  Q
    |   ||| ||||| ||||||||||||    
T  9581327 cacaaagaacaaacctaatttctacc 9581302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 16499171 - 16499126
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||    
T  16499171 acctactctgggggagagattgatctctccaatccactatcaatga 16499126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 43401785 - 43401965
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||   |||||| | | |||||||| |||| |||||||||||||  ||||||||| || |||||||||||||| ||||| | || || ||||    
T  43401785 aacaacaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagagattaatttctccaatccactatcaatg-agttcttacaaa 43401883  T
Q  118 gagatgcaaaaag-gttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |||||  |||| | ||||||| |||||| ||| |||||| ||   ||| ||||  |||||||||| ||||||| ||||||||    
T  43401884 gagataaaaaatgcgttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctc 43401965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 44331689 - 44331593
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| |||||||||||||||||||||||||||| |||| || || || ||||||||| ||||  | |||||| |||||| ||| ||||||    
T  44331689 tgacctaatctgggggagagattgatctctccaatccactatcaat-aagttcttacaaagagatacaaatggcttacaagaaattagcttcaacaag 44331593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 230
Target Start/End: Complemental strand, 51398958 - 51398787
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||  ||||||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| |||||| |    
T  51398958 tgacctaatctgggggagagataaatctctccaatccactatcaatg-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagtt 51398860  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctccttccataaataagacactcaatacttttcact 230  Q
    |   ||| ||||  |||||||||| ||||||||||||||| | || || || ||||||||||||  ||||||||    
T  51398859 cactaagaacaaccctaatttctacccatttttccaatct-catcaatgaacaagacactcaatgattttcact 51398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 5260363 - 5260477
Alignment:
Q  74 agagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatct 173  Q
    ||||||||| ||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| ||   ||| ||||  ||    
T  5260363 agagattgaactctccaatccactatcaatg-agttcttccaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 5260461  T
Q  174 aatttctaccattttt 189  Q
    |||||||||| |||||    
T  5260462 aatttctacccttttt 5260477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 155
Target Start/End: Complemental strand, 32891277 - 32891152
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| || ||||| |||||||| ||||| |||||||||| | |||||||||| ||||||||||||||||| ||| | | || || ||||||||| ||||    
T  32891277 aagaaatgattatccagttcggtccaaca-tgacctactccgggggagagatttatctctccaatccactatcaacg-agttcttacaaagagatacaaa 32891180  T
Q  128 aaggttacaataaattaactttaacaag 155  Q
       ||||||| |||||| ||| ||||||    
T  32891179 tgagttacaagaaattagcttcaacaag 32891152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 41819532 - 41819587
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccacta 98  Q
    |||| ||| ||||||||||||||||||  |||||||||||| ||||||||||||||    
T  41819532 agtttggtccaacaatgacctactctggaggagagattgatgtctccaatccacta 41819587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 44700515 - 44700597
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaa 154  Q
    |||||||||||||||||||||||||||| ||| | | || || ||||||||| |||| ||||||||| |||||| ||| |||||    
T  44700515 gggagagattgatctctccaatccactatcaaag-agttcttacaaagagatacaaataggttacaagaaattagcttcaacaa 44700597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 29196410 - 29196506
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| | || |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||| ||| |||||| |||| |||||    
T  29196410 tgacctaatttgggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttccaagaaattagctttgacaag 29196506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 40913437 - 40913397
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  40913437 tgacctaatctgggggagagattgatctctccaatccacta 40913397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 5433901 - 5433944
Alignment:
Q  53 aacaatgacctactctgtgggagagattgatctctccaatccac 96  Q
    |||||||||||||| ||  |||||||||||||||||||||||||    
T  5433901 aacaatgacctactatggaggagagattgatctctccaatccac 5433944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 7780028 - 7780075
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  7780028 tgacctactctggaggagagattgaactctccaatccactatcaatga 7780075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 29682490 - 29682364
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaa 170  Q
    |||||||||||||||||||||||||||| ||||| | || || ||||| ||| ||||  ||| |||| |||||| ||| |||||| ||   ||| |||||    
T  29682490 gggagagattgatctctccaatccactatcaatg-agttcttacaaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaacaaa 29682392  T
Q  171 tctaatttcta-ccatttttccaatctc 197  Q
      ||||||||| ||||||| ||||||||    
T  29682391 cataatttctacccattttcccaatctc 29682364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 39153385 - 39153432
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||| |||| ||||||||||| |||||||||||||||| ||||||    
T  39153385 tgacctaatctgggggagagattgttctctccaatccactatcaatga 39153432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 40734642 - 40734595
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||| | || |||||||||||||||||||||||||||| ||||||    
T  40734642 tgacctaatttgggggagagattgatctctccaatccactatcaatga 40734595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 47304395 - 47304348
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||| |||  |||||||||||||||||||||||||||| ||||||    
T  47304395 tgacctaatcttggggagagattgatctctccaatccactatcaatga 47304348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 9636150 - 9636235
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    ||||||||| ||  ||||||||||| ||||||||||||||| ||||| | || || |||| |||| ||||| |||||||| ||||||    
T  9636150 tgacctactttggaggagagattgaactctccaatccactatcaatg-agttcttacaaaaagatacaaaagggttacaagaaatta 9636235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 2075099 - 2075144
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaat 103  Q
    |||||||||||  |||||||||||||||||| ||||||||| ||||    
T  2075099 tgacctactctcggggagagattgatctctcaaatccactatcaat 2075144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 4570094 - 4570049
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||  | ||||||||||||||||||||||||| ||||||    
T  4570094 acctactctggagtagagattgatctctccaatccactatcaatga 4570049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 33191980 - 33191928
Alignment:
Q  52 caacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||||| ||||| | |||||||||||||||| ||||||||| ||||||    
T  33191980 caacaatgacctcctctg-gagagagattgatctctctaatccactatcaatga 33191928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 5236481 - 5236619
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||| ||||||||||||| |||||| || ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  5236481 tgacctaatctg-gggaaagattgatctctcgaatccattatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagtt 5236578  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  5236579 cacaaagaacaaccctaatttctacccattttcccaatctc 5236619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 8166536 - 8166604
Alignment:
Q  114 caaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctac 182  Q
    ||||||||| ||||||||||| || | |||||||| |||||  ||| |||| ||||| |||||||||||    
T  8166536 caaagagatacaaaaaggttataagatattaacttcaacaaactctccaagaacaaacctaatttctac 8166604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 27305734 - 27305774
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||||| ||  |||||||||||||||||||||||||||    
T  27305734 tgacctactttggaggagagattgatctctccaatccacta 27305774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 31314589 - 31314490
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| | || |||||| ||||||||||||||||||||| ||| | | || || |||| |||| ||||  |||||||| |||||| ||| ||||||||    
T  31314589 tgacctaatatgggggagatattgatctctccaatccactatcaaag-agttcttacaaaaagatacaaatgggttacaagaaattagcttcaacaagat 31314491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 169
Target Start/End: Original strand, 27442 - 27577
Alignment:
Q  34 tgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggtt 133  Q
    |||||| ||| |||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||| | ||  || ||||||||| ||||   |||    
T  27442 tgtttacctaattcggtccaacaatgacctactatgggggagagattgatctctccaatccactatcaataagttatttacaaagagatacaaatgagtt 27541  T
Q  134 acaataaattaactttaacaagatcttcaagcacaa 169  Q
    |||| |||||| ||| |||||| |||||||| ||||    
T  27542 acaagaaattagcttcaacaagctcttcaagaacaa 27577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 5406224 - 5406362
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  5406224 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagctttgacaagtt 5406322  T
Q  158 cttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    |   ||| ||||  ||||||||||||||||| ||||||||    
T  5406323 cacaaagaacaaccctaatttctaccattttcccaatctc 5406362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 5410549 - 5410687
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  5410549 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagctttgacaagtt 5410647  T
Q  158 cttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    |   ||| ||||  ||||||||||||||||| ||||||||    
T  5410648 cacaaagaacaaccctaatttctaccattttcccaatctc 5410687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 220
Target Start/End: Complemental strand, 25073698 - 25073551
Alignment:
Q  73 gagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatc 172  Q
    ||||||||||| |||| ||||||||| |||||| ||  || || |||||| ||||| |||||||||||| || |||||||||| ||   ||| | |||||    
T  25073698 gagagattgatttctctaatccactatcaatgagttctttacatagagatacaaaagggttacaataaaatagctttaacaagctcacgaagaataaatc 25073599  T
Q  173 taatttctaccatttttccaatctccttccataaataagacactcaat 220  Q
    ||||||||||||||||| ||||||||| |||| || |||| |||||||    
T  25073598 taatttctaccattttttcaatctcctcccatgaacaagatactcaat 25073551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 31404702 - 31404837
Alignment:
Q  61 cctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatctt 160  Q
    |||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| ||      
T  31404702 cctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcac 31404800  T
Q  161 caagcacaaatctaatttctaccatttttccaatctc 197  Q
     ||| ||||  ||||||||||||||||| ||||||||    
T  31404801 aaagaacaaccctaatttctaccattttcccaatctc 31404837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 5413418 - 5413556
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  5413418 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagctttgacaagtt 5413516  T
Q  158 cttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||||| |||| ||||||||    
T  5413517 cgcaaagaacaaccctaatttctacctttttcccaatctc 5413556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 26800770 - 26800691
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||||||| ||| |||| ||| |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  26800770 aacaacaccaa-gaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta 26800691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 230
Target Start/End: Complemental strand, 4045566 - 4045396
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatct 159  Q
    ||||||| || || ||| ||||||||||||||||||||| |||||| ||  || |||||||||  |||| | |||||| |||||| ||| |||||| ||     
T  4045566 acctactttggggtagaaattgatctctccaatccactatcaatgagttatttacaaagagatataaaatgattacaagaaattagcttcaacaagctca 4045467  T
Q  160 tcaagcacaaa-tctaatttctaccatttttccaatctccttccataaataagacactcaatacttttcact 230  Q
    | ||| |||||  ||||||||||||||||| ||||||| || | ||||| ||||||||||||  ||||||||    
T  4045466 taaagaacaaaccctaatttctaccattttcccaatct-ctccaataaacaagacactcaatgattttcact 4045396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 22424811 - 22424990
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    ||||||||||| ||| |||| | | ||| |||| ||||||||||||||||||  |||||||||||||||||||||||||||  |||| | || || ||||    
T  22424811 aacaacaccaa-gaaatgttcacccagtacggtccaacaatgacctactctgaaggagagattgatctctccaatccacta-taatg-agttcttacaaa 22424907  T
Q  118 gagatgcaaaaa--ggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    ||||| ||||||  |||||||| |||||| ||| |||||| ||   ||| ||||  |||||||||| ||||||||||||||||    
T  22424908 gagatacaaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttttccaatctc 22424990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 2972963 - 2973102
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||||||||   ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  2972963 tgacctactcttgaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagct 2973061  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||| |||||||||| ||||||| ||||||||    
T  2973062 cacaaagaacaaacctaatttctacccattttcccaatctc 2973102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 5043810 - 5043648
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    ||||||||||| ||| |||| | | |||||||| ||||||||||||||| ||  |||||||||||||||||||||| |||| ||||| | || || ||||    
T  5043810 aacaacaccaa-gaaatgttcacccagttcggtccaacaatgacctactatggaggagagattgatctctccaatctactatcaatg-agttcttacaaa 5043713  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctac 182  Q
    ||||| ||||   ||||||| |||||| ||| |||||| ||   ||| ||||| |||||||||||    
T  5043712 gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctac 5043648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 21589075 - 21588936
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  21589075 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagct 21588977  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  21588976 cacaaagaacaaccctaatttctacccattttcccaatctc 21588936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 21593808 - 21593669
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  21593808 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagct 21593710  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  21593709 cacaaagaacaaccctaatttctacccattttcccaatctc 21593669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 26830147 - 26830286
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||| ||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  | |||||| |||||| ||| |||||| |    
T  26830147 tgacctactttggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatggattacaagaaattagcttcaacaagct 26830245  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| |||| ||||||||||| ||||||||||||||||    
T  26830246 cacaaagaacaactctaatttctacccatttttccaatctc 26830286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 3808706 - 3808872
Alignment:
Q  32 attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-ag 130  Q
    |||||| | |||||||||| |||  |||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||||  |    
T  3808706 attgttcacctagttcggtccaatcatgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaatgg 3808804  T
Q  131 gttacaataaattaactttaacaagatcttcaagcacaaatctaatttctacc-atttttccaatctc 197  Q
    ||||||| ||||||  || |||||| ||   ||| ||||  |||||||||||| ||||| ||||||||    
T  3808805 gttacaagaaattagtttcaacaagctcacaaagaacaaccctaatttctacctattttcccaatctc 3808872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 30834560 - 30834690
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  30834560 tgacctactctggaggagagattgaactctccaatccactatcaatg-agttcttccaaagagatacaaaagggttacaagaaattagctttgacaagtt 30834658  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  |||||||||||| |||||    
T  30834659 cacaaagaacaaccctaatttctacccttttt 30834690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 2171556 - 2171687
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | || || ||||||||| | ||| |||||||| |||||| |||| ||||| |    
T  2171556 tgacctactctggaggagagattgaactctccaatccactatcaatg-agttcttacaaagagatac-aaagggttacaagaaattagctttgacaagtt 2171653  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  ||||||||||||||||||||    
T  2171654 cacaaagaacaaccctaatttctaccatttttcc 2171687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 28137432 - 28137528
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||| | || || |||||| || ||||  |||||||| |||||| ||| ||||||    
T  28137432 tgacctactctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagaaatacaaatgggttacaagaaattagcttaaacaag 28137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 26954277 - 26954357
Alignment:
Q  23 caccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||| ||||| | |||||||||| ||||  ||||||||| || |||||||||||||||||||||||||||| ||||||    
T  26954277 caccaaaga-ttgttgacctagttcggtccaact-tgacctactttgggggagagattgatctctccaatccactatcaatga 26954357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 33160381 - 33160506
Alignment:
Q  63 tactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttca 162  Q
    |||||||  ||||||||||||||||||||||||| | ||||| | || || ||||||||| |||||  ||||||| |||||| |||| ||||| ||   |    
T  33160381 tactctggaggagagattgatctctccaatccaccatcaatg-agttcttacaaagagatacaaaagagttacaagaaattagctttgacaagttcacaa 33160479  T
Q  163 agcacaaatctaatttctaccattttt 189  Q
    || |||| ||||||||||||| |||||    
T  33160480 agaacaactctaatttctacctttttt 33160506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 17758206 - 17758028
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    ||||||||||| ||| |||| | |||||||||| |||   ||| |||||||   || |||||||||||||||||||||||| ||||| | || || ||||    
T  17758206 aacaacaccaa-gaaatgttcacctagttcggtccaaacttgaactactctagaggggagattgatctctccaatccactatcaatg-agttcttacaaa 17758109  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    ||||| ||||  |||||||| |||||| ||| |||||| ||   ||| ||||  |||||||||| ||||||| ||||||||    
T  17758108 gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctc 17758028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 5409093 - 5409140
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  5409093 tgacctactctggaggagagattgatctctccaatccactatcaatga 5409140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 16452353 - 16452483
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | || || |||||||||   ||| |||||||| |||||| |||| ||||| |    
T  16452353 tgacctactctggaggagagattgaactctccaatccactatcaatg-agttcttccaaagagatatgaaagggttacaagaaattagctttgacaagtt 16452451  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  |||||||||||| |||||    
T  16452452 cacaaagaacaaccctaatttctacccttttt 16452483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 9183069 - 9183150
Alignment:
Q  72 ggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaa 154  Q
    ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||    
T  9183069 ggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa 9183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 33211209 - 33211246
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatcca 95  Q
    |||||||||||| |||||||||||||||||||||||||    
T  33211209 tgacctactctgggggagagattgatctctccaatcca 33211246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 6097438 - 6097522
Alignment:
Q  22 acaccaaaga-attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||| |||||| | | |||||||| |||   ||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  6097438 acaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatga 6097522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 16569166 - 16569119
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||| ||||  ||||||||||||||||||||||||||| ||||||    
T  16569166 tgacctaatctggaggagagattgatctctccaatccactatcaatga 16569119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 17763173 - 17763087
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||| ||| |||| | |||||||||| |||   ||| ||||||||  ||||||||||||| ||||||||||||| ||||||    
T  17763173 aacaacaccaa-gaaatgttcacctagttcggtccaaacttgatctactctggaggagagattgatcactccaatccactatcaatga 17763087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 603112 - 603208
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||  ||||||||||||| |||||||||||||| ||| | | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  603112 tgacctaatcttggggagagattgatttctccaatccactatcaacg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 603208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 412283 - 412199
Alignment:
Q  22 acaccaaaga-attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||| |||||| | | |||||||| |||   ||||||||||||  ||||||||||| ||||| ||||||||| ||||||    
T  412283 acaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctctaatccactatcaatga 412199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 3038927 - 3038967
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||| |||| |||||||||| |||||||||||||||||    
T  3038927 tgacctaatctgggggagagattaatctctccaatccacta 3038967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 4253523 - 4253689
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||| |||||||||| ||| | ||||||||||||||||||||||||||||||| |||||| || |||||| ||  || |||||||||  |||    
T  4253523 aagaaatgtttacctagttcggtccaa-attgacctactctgtgggagagattgatctctctaatccattatcaatgagttctttccaaagagatataaa 4253621  T
Q  128 aaggttacaataaattaactttaacaagatcttcaagcacaaa-tctaatttctaccatttttccaat 194  Q
    | |||||||  |||||| ||| |||||| ||   ||| |||||  ||||||||||||||||| |||||    
T  4253622 agggttacatgaaattagcttcaacaagctcacaaagaacaaaccctaatttctaccattttaccaat 4253689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 5116736 - 5116587
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaa 170  Q
    |||||||||| ||||||||||| ||||| |||||| ||  || ||||||||| ||||| | ||||||||||||| ||| |||||  | | |||| |||||    
T  5116736 gggagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaaggtttacaataaattatcttcaacaaactatccaagaacaaa 5116637  T
Q  171 tctaatttctaccatttttccaatctccttccataaataagacactcaat 220  Q
     |||||||||||  |||| | |||||||| ||||||| |||| |||||||    
T  5116636 cctaatttctactcttttcctaatctcctcccataaacaagagactcaat 5116587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 22328375 - 22328511
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    |||||||||||| |||  |||| | |||||||| |||||||||||||||||  |||||||||||||||||| |||||||||  ||||| ||  || ||||    
T  22328375 aacaacaccaaaaaata-tttacccagttcggtccaacaatgacctactctaggggagagattgatctctcaaatccactattaatgacttccttgcaaa 22328473  T
Q  118 gagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||| |||||  ||||||| |||||| ||| ||||||    
T  22328474 gagatacaaaagagttacaagaaattagcttcaacaag 22328511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 48491723 - 48491584
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || |||||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  48491723 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttctttcaaagagatacaaatgggttacaagaaattagcttcaacaagtt 48491625  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  48491624 cacaaagaacaaccctaatttctacccattttcccaatctc 48491584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 197
Target Start/End: Original strand, 3904626 - 3904780
Alignment:
Q  43 agttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaat 142  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||  || ||||| |||||| ||  || |||||||||||||||  ||||||| ||||    
T  3904626 agttcggtccaacaatgacctactctgagggagagattgatctctctgat-cactatcaatgagttctttacaaagagatgcaaaagtgttacaagaaat 3904724  T
Q  143 taactttaacaagatcttcaagcac-aaatctaatttctaccatttttccaatctc 197  Q
    ||  || || | | |||  ||| || ||| ||||||||||||||||| ||||||||    
T  3904725 tacattcaataggctctcaaagaacaaaacctaatttctaccattttcccaatctc 3904780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 8359301 - 8359387
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||| ||| |||| | | |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  8359301 aacaacaccaa-gaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatga 8359387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 35854058 - 35853926
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  35854058 tgacctactctggaggagagattgaactctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagctttgacaagtt 35853960  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  |||||||||||| |||||||    
T  35853959 cacaaagaacaaccctaatttctaccctttttcc 35853926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 48489609 - 48489436
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||||| | |||||||| ||||  ||||||| |||| ||||||||||||||||||||||||||||  |||| | || || ||||||||    
T  48489609 acaccaaaga-ttgtttacccagttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatgaatg-agttattgcaaagaga 48489513  T
Q  122 tgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    | ||||  |||||||| |||||| ||| |||||| | |  ||| ||||  |||||||||| ||||||| ||||||||    
T  48489512 tacaaatgggttacaagaaattagcttcaacaagttttcaaagaacaaccctaatttctacccattttcccaatctc 48489436  T

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Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 23555184 - 23555054
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||| | |||||  ||||||| |||||| ||| |||||| |    
T  23555184 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagaggtacaaaagtgttacaagaaattagcttcaacaagtt 23555086  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  ||||||||||||||||||    
T  23555085 cacaaagaacaaccctaatttctaccattttt 23555054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 3259139 - 3259043
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||  ||| || ||||||||| ||||   |||||||||||||| ||| ||||||    
T  3259139 tgacctactctggaggagagattgatctctccaatccactatcaatgggttt-ttacaaagagatacaaatgagttacaataaattagcttaaacaag 3259043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 14069857 - 14069989
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||  |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| |||| ||||| |    
T  14069857 tgacctaatcttggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagctttgacaagtt 14069955  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  |||||||||||| |||||||    
T  14069956 cacaaagaacaaccctaatttctaccctttttcc 14069989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 14379885 - 14380017
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||  |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| |||| ||||| |    
T  14379885 tgacctaatctaggggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagctttgacaagtt 14379983  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  |||||||||||| |||||||    
T  14379984 cacaaagaacaaccctaatttctaccctttttcc 14380017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 29991197 - 29991101
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || ||  |||||||| ||||| |||||||| |||||| |||| |||||    
T  29991197 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttattagaaagagatacaaaagggttacaagaaattagctttgacaag 29991101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 32358078 - 32358174
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  32358078 tgacctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 32358174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 18126788 - 18126649
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||  ||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  18126788 tgacctagtctgggggagagattgattcctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttgaacaagtt 18126690  T
Q  158 cttcaagcacaaatctaatttctac-catttttccaatctc 197  Q
    |   ||| ||||  ||||||||||| |||||||||||||||    
T  18126689 cacaaagaacaaccctaatttctacacatttttccaatctc 18126649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 22270117 - 22269978
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||  | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  22270117 tgacctactctggaggagagattgatctctccaatccactatcaat-cagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagct 22270019  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  22270018 cacaaagaacaaccctaatttctacccattttcccaatctc 22269978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 27347961 - 27347822
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| ||||||||||||||||| |||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  27347961 tgacctaatctgggggagagattgatctctgcaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagtt 27347863  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  27347862 cacaaagaacaatcctaatttctacccattttcccaatctc 27347822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 6432115 - 6431977
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||| | | || || ||||||||| ||||  |||||||| |||||| ||| |||||| |    
T  6432115 tgacctactctgaaggagagattgatctctccaatccactatcaacg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagct 6432017  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatct 196  Q
    |   ||| ||||  |||||||||| ||||||| |||||||    
T  6432016 cacaaagaacaatcctaatttctacccattttcccaatct 6431977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 220
Target Start/End: Complemental strand, 26639499 - 26639303
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaa----agagatg 123  Q
    ||||||| |||| | ||||||||||||||||||| |||| ||  ||||||||||||||||| |||||| || ||| || ||  || |||    | | ||     
T  26639499 aagaattttttagccagttcggtacaacaatgacatactatggaggagagattgatctctctaatccattatcaaagagttatttacaatgatatatata 26639400  T
Q  124 caaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctccttccataaataagacactcaat 220  Q
    ||||| |||||||| |||||||| | |||||  ||| |||| ||| | |||||||||||||||||  ||||||| | ||| ||| |||| |||||||    
T  26639399 caaaagggttacaagaaattaacatcaacaaactctccaagaacatacctaatttctaccattttcacaatctcttcccaaaaagaagagactcaat 26639303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 155
Target Start/End: Original strand, 30024731 - 30024852
Alignment:
Q  32 attgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaagg 131  Q
    |||||| ||| |||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||| ||| | | || || ||||||||| ||||  ||    
T  30024731 attgttgatccagttcggtccaact-tgacctactctgggggagtgattgatctctccaatccactatcaaag-agttcttacaaagagatacaaatggg 30024828  T
Q  132 ttacaataaattaactttaacaag 155  Q
    |||||| |||||| ||| ||||||    
T  30024829 ttacaagaaattagcttcaacaag 30024852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 34310701 - 34310787
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||||||| ||||| | | |||||||| |||   ||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  34310701 aacaacaccaaaga-ttgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatga 34310787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 19502322 - 19502226
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    |||| |||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||||  ||||||| |||||| |||| |||||    
T  19502322 tgacttactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagagttacaagaaattagctttgacaag 19502226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 41317458 - 41317590
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||| ||| ||||  | |||||| |||||| |||| ||||| |    
T  41317458 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttcttacaaagggatacaaatggattacaagaaattagctttgacaagct 41317556  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  ||||||||||||| ||||||    
T  41317557 cacaaagaacaaccctaatttctaccaattttcc 41317590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 8153486 - 8153391
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaa 154  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| |||| ||||    
T  8153486 tgacctaatctgggggagagattgatctctccaatccactatcaatg-agttattacaaagagatacaaatgagttacaagaaattagctttgacaa 8153391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 41649035 - 41649173
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| | || |||||||||||||||||||||||||||| |||||| ||  || ||||| ||| ||||  |||||||| |||||| ||  |||||| |    
T  41649035 tgacctaatttgggggagagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcta-aacaagct 41649132  T
Q  158 cttcaagcacaaatctaatttctacc-atttttccaatctc 197  Q
    |   ||| ||||| |||||||||||| ||||||||||||||    
T  41649133 cacaaagaacaaacctaatttctaccaatttttccaatctc 41649173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 43864388 - 43864249
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| | |||||||||||||||||||||||||| |||| | ||| || ||||||||| ||||  |||||||  |||||| ||| |||||| |    
T  43864388 tgacctaatctgggagagagattgatctctccaatccactatcaattagttt-ttacaaagagatacaaatgggttacaggaaattagcttcaacaagtt 43864290  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||| ||||||||||||    
T  43864289 cacaaagaacaaccctaatttctacccacttttccaatctc 43864249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 47673980 - 47674063
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    |||||||||||||||||||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  47673980 gggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 47674063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 4586292 - 4586166
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaa 170  Q
    |||||||||||||||||||||||||||| ||||| | || || |||||||||  |||  |||||||| |||||| ||| |||||| ||   ||| ||||     
T  4586292 gggagagattgatctctccaatccactatcaatg-agttcttacaaagagataaaaatgggttacaaaaaattagcttcaacaagttcacaaagaacaac 4586194  T
Q  171 tctaatttcta-ccatttttccaatctc 197  Q
     |||||||||| ||||||| ||||||||    
T  4586193 cctaatttctacccattttcccaatctc 4586166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 26417447 - 26417321
Alignment:
Q  71 gggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaa 170  Q
    |||||||||||||||||||||||||||| ||| | | || || ||||||||| ||||  |||||||| |||||| ||| |||||| ||   ||| ||||     
T  26417447 gggagagattgatctctccaatccactatcaacg-agttcttacaaagagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaacaac 26417349  T
Q  171 tctaatttcta-ccatttttccaatctc 197  Q
     |||||||||| ||||||| ||||||||    
T  26417348 cctaatttctacccattttcccaatctc 26417321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 39731513 - 39731374
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||  |   |||||||| |||||  ||||||| ||||||  | | ||||| |    
T  39731513 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatctgacaagtt 39731414  T
Q  158 cttcaagcacaaatctaatttctaccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||||| |||||||||||||    
T  39731413 cacaaagaacaaccctaatttctaccctttttccaatctc 39731374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 2390442 - 2390330
Alignment:
Q  41 ctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataa 140  Q
    |||||||||| ||||  ||||||||||||  |||||||||||||||||||||||||||   ||| | || || ||||||||| ||||  |||||||| ||    
T  2390442 ctagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatatatg-agttattacaaagagatacaaatgggttacaagaa 2390345  T
Q  141 attaactttaacaag 155  Q
    |||| ||| ||||||    
T  2390344 attagcttcaacaag 2390330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 18396486 - 18396412
Alignment:
Q  34 tgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatt 108  Q
    |||||| | |||||||| || || |||||||||||   ||||||||||||||||||||||| ||| |||||||||    
T  18396486 tgtttacccagttcggtccaccattgacctactcttgaggagagattgatctctccaatcctctatcaatgaatt 18396412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 23565085 - 23565170
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    |||||||||||  | |||||||||||||||||||||||||| ||||| | || || ||||||||| |||||  ||||||| ||||||    
T  23565085 tgacctactctaggagagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagagttacaagaaatta 23565170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 31105388 - 31105556
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaa 127  Q
    ||||| |||||| | |||||||| ||||  ||| |||||||  |||||||||| ||||||||||||||| | ||||| | || || |||| |||| ||||    
T  31105388 aagaaatgtttacccagttcggtccaact-tgatctactcttggggagagatttatctctccaatccaccatcaatg-agttcttacaaaaagatacaaa 31105485  T
Q  128 aaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
      |||||||| |||||| ||| |||||| ||   ||| | |||||||||||||| ||||||| ||||||||    
T  31105486 tgggttacaagaaattagcttcaacaagctcacaaagaaaaaatctaatttctacccattttcccaatctc 31105556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 31519076 - 31519007
Alignment:
Q  28 aagaattgtttatctagttcggtacaacaatgacctactctgtgg-gagagattgatctctccaatccact 97  Q
    ||||| |||||||| |||||||| ||||  |||||||||||| || |||||||||||||||||||||||||    
T  31519076 aagaaatgtttatccagttcggtccaact-tgacctactctggggagagagattgatctctccaatccact 31519007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 12097857 - 12097932
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactac 99  Q
    |||||||||| ||||| | |||||||||| ||||  ||||||| |||| |||||||||| ||||||||||||||||||    
T  12097857 acaccaaaga-ttgttgacctagttcggtccaact-tgacctaatctgggggagagattcatctctccaatccactac 12097932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 25766984 - 25767124
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaa-aggttacaataaattaactttaacaaga 156  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | || ||  |||||||| |||||  |||||||| |||||| |||| |||||     
T  25766984 tgacctactctggaggagagattgaactctccaatccactatcaatg-agttcttcaaaagagatacaaaaggggttacaagaaattagctttgacaagt 25767082  T
Q  157 tcttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    ||   ||| ||||  |||||||||| || |||||||||||||    
T  25767083 tcacaaagaacaaccctaatttctacccttttttccaatctc 25767124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 2360996 - 2361135
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||| |||| ||||||||||||| |||| ||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| |||||| |    
T  2360996 tgacctaatctgggggagagattgatatctcaaatccactatcaatg-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagct 2361094  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  2361095 cacaaagaacaaccctaatttctacccattttcccaatctc 2361135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 29608881 - 29608742
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  |||| ||||||| |||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| ||| |||||| |    
T  29608881 tgacctactctggaggagtgattgatatctccaatccactatcaatg-agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagct 29608783  T
Q  158 cttcaagcacaaatctaatttcta-ccatttttccaatctc 197  Q
    |   ||| ||||  |||||||||| ||||||| ||||||||    
T  29608782 cacaaagaacaaccctaatttctacccattttcccaatctc 29608742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 30814580 - 30814528
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttg 110  Q
    ||||||| | || |||||||||||||||||||||||||||| |||||| ||||    
T  30814580 tgacctaatatgggggagagattgatctctccaatccactatcaatgagtttg 30814528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 154
Target Start/End: Original strand, 47676126 - 47676255
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagaga 121  Q
    |||||||||| ||||| ||| |||||||| ||||  ||||||| | || |||||||||||||||||||| ||||||| || || | || || ||||||||    
T  47676126 acaccaaaga-ttgttgatccagttcggtccaact-tgacctaatatgggggagagattgatctctccattccactatcattg-agttcttacaaagaga 47676222  T
Q  122 tgcaaaaaggttacaataaattaactttaacaa 154  Q
    | ||||  |||||||| |||||| ||| |||||    
T  47676223 tacaaatgggttacaagaaattagcttcaacaa 47676255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 496007 - 496054
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||| |  |||||||||||||||||||||||||||| ||||||    
T  496007 tgacctactataggggagagattgatctctccaatccactatcaatga 496054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 24525526 - 24525573
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||| |||  |||||||||||||||||||||||||||| ||||||    
T  24525526 tgacctaatcttggggagagattgatctctccaatccactatcaatga 24525573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 25615997 - 25615950
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||||  ||||||||||||||||| ||||||||| ||||||    
T  25615997 tgacctactctggaggagagattgatctctctaatccactatcaatga 25615950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 36146398 - 36146479
Alignment:
Q  22 acaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||| ||||| | |||||||||| ||||  ||||||| | || |||||||||||||||||| ||||||||| ||||||    
T  36146398 acaccaaaga-ttgttgacctagttcggtccaact-tgacctaatatgggggagagattgatctctcaaatccactatcaatga 36146479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 43363556 - 43363627
Alignment:
Q  117 agagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttt 188  Q
    |||||| |||||  ||||||||||||||  || |||||| ||| |||| ||||| |||||||||||||||||    
T  43363556 agagatacaaaagagttacaataaattagtttcaacaagctctccaagaacaaacctaatttctaccatttt 43363627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 4178917 - 4178786
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    |||||| |||||  ||||||||||| || | |||||||||| |||||| ||   ||||||||||| ||||| |||||||| |||||| ||||  |||| |    
T  4178917 tgacctgctctggaggagagattgaactgttcaatccactatcaatgagttc--ttcaaagagatacaaaagggttacaagaaattagctttcccaagtt 4178820  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  |||||||||||| |||||||    
T  4178819 cacaaagaacaaccctaatttctaccttttttcc 4178786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 4508732 - 4508869
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatct 159  Q
    ||||||||||  | ||||||||||||||||||||||||  ||||| | || || ||||||||| ||||  |||||||| |||||| ||| || ||| ||     
T  4508732 acctactctgaagaagagattgatctctccaatccactctcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaataagctca 4508830  T
Q  160 tcaagcacaaatctaatttctac-catttttccaatctc 197  Q
      ||| ||||  ||||||||||| |||||| ||||||||    
T  4508831 caaagaacaaccctaatttctactcattttcccaatctc 4508869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 31732993 - 31733078
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    ||||||| | || ||||||||||||||||||||||||| || ||||| | || || ||||||||| ||||  |||||||| ||||||    
T  31732993 tgacctaatttgggggagagattgatctctccaatccagtatcaatg-agttcttacaaagagatacaaatgggttacaagaaatta 31733078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 36574558 - 36574710
Alignment:
Q  77 gattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatc-taa 175  Q
    ||||||||||||||| |||||| |||||| ||  || |||||||||  |||| |||||||| |||||| ||| |||||  ||   ||| ||||||| |||    
T  36574558 gattgatctctccaaaccactatcaatgagttctttacaaagagatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaatcttaa 36574657  T
Q  176 tttctaccatttttccaatctccttccataaataagacactcaatacttttcact 230  Q
    |||||||| |||  ||||||| || | ||||| ||||||||| ||| ||||||||    
T  36574658 tttctacc-tttccccaatct-ctccaataaacaagacactcgataattttcact 36574710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 1113801 - 1113705
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| | || ||||||||||||||||||||||| |||| ||||| | || || ||||||||| ||||  ||||| || |||||| ||| ||||||    
T  1113801 tgacctaatatgggggagagattgatctctccaatctactatcaatg-agttcttacaaagagatacaaatgggttataagaaattagcttcaacaag 1113705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 1360230 - 1360338
Alignment:
Q  114 caaagagatgcaaaaa--ggttacaataaattaactttaacaagatcttcaagcacaaatctaatttctaccatttttccaatctccttccataaataag 211  Q
    ||||||||| ||||||  |||||||| |||||  ||| |||||| ||| ||||   ||| |||||||||||| |||| |||||||| |||||| || |||    
T  1360230 caaagagatacaaaaaagggttacaagaaattcgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaag 1360329  T
Q  212 acactcaat 220  Q
    | |||||||    
T  1360330 agactcaat 1360338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 6359992 - 6360072
Alignment:
Q  74 agagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    |||||||||||||||||||| |||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  6359992 agagattgatctctccaatcaactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 6360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 48599372 - 48599405
Alignment:
Q  72 ggagagattgatctctccaatccactaccaatga 105  Q
    ||||||||||||||||||||||||||| ||||||    
T  48599372 ggagagattgatctctccaatccactatcaatga 48599405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 434677 - 434545
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | || || ||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  434677 tgacctactctggaggagagattgaactctccaatccactatcaatg-agttcttacaaagagatacaaaagggttacaagaaattagctttgacaagtt 434579  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  |||||||||||| |||||||    
T  434578 cacaaagaacaaccctaatttctaccctttttcc 434545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 1059 - 930
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||   ||||||||||| ||||| |||||||| |||||| |||| ||||| |    
T  1059 tgacctactctggaggagagattgaactctccaatccactatcaatgagtt--gttcaaagagatacaaaagggttacaagaaattagctttgacaagtt 962  T
Q  158 cttcaagcacaaatctaatttctaccattttt 189  Q
    |   ||| ||||  |||||||||||| |||||    
T  961 cacaaagaacaaccctaatttctacccttttt 930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 10671 - 10548
Alignment:
Q  18 aacaacaccaaagaattgtttatctagttcggtacaacaatgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaa 117  Q
    ||||||||||| ||| |||||| | |||||||| ||||  ||||||||||||  |||||||||||||||| |||||||||| ||| | | || || ||||    
T  10671 aacaacaccaa-gaaatgtttacccagttcggtccaact-tgacctactctggaggagagattgatctcttcaatccactatcaacg-agttcttacaaa 10575  T
Q  118 gagatgcaaaaaggttacaataaatta 144  Q
    ||||| ||||| |||||||||||||||    
T  10574 gagatacaaaatggttacaataaatta 10548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 11701 - 11569
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagat 157  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | || || ||||||||| ||||   ||||||| |||||| |||| ||||| |    
T  11701 tgacctactctggaggagagattgaactctccaatccactatcaatg-agttcttacaaagagatacaaatgagttacaagaaattagctttgacaagtt 11603  T
Q  158 cttcaagcacaaatctaatttctaccatttttcc 191  Q
    |   ||| ||||  ||||||||||||||||||||    
T  11602 cacaaagaacaaccctaatttctaccatttttcc 11569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 114744 - 114650
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||| | || || ||||||||| |||||  ||||||| |||||| |||| |||||    
T  114744 acctactctggaggagagattgatctctccaatccactatcaatg-agttcttacaaagagatacaaaagcgttacaagaaattagctttgacaag 114650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 149123 - 149168
Alignment:
Q  60 acctactctgtgggagagattgatctctccaatccactaccaatga 105  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||    
T  149123 acctactctgggggagagattgatctctccaatccactatcaatga 149168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 7457 - 7332
Alignment:
Q  72 ggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaat 171  Q
    |||||||||||||| |||||||||||| ||||| | || || ||||||||| ||||  |||||||| |||||| ||| |||||| ||   ||| ||||      
T  7457 ggagagattgatctttccaatccactatcaatg-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacc 7359  T
Q  172 ctaatttcta-ccatttttccaatctc 197  Q
     ||||||||| ||||||||||||||||    
T  7358 ttaatttctacccatttttccaatctc 7332  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 18028 - 18123
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    |||||||| |||  ||||||||||||||||||||||||||| |||||| ||  || ||||||||| ||||   ||||||| |||||| ||| ||||||    
T  18028 tgacctaccctggaggagagattgatctctccaatccactatcaatgagtt--ttacaaagagatacaaatgagttacaagaaattagcttcaacaag 18123  T

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Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 20439 - 20535
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaag 155  Q
    ||||||| |||| ||||||||||||||||||||||||| || ||| | | || || ||||||||| ||||  |||||||| |||||| ||| ||||||    
T  20439 tgacctaatctgggggagagattgatctctccaatccaatatcaaag-agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaag 20535  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 25175 - 25068
Alignment:
Q  81 gatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaattaactttaacaagatcttcaagcacaaatctaatttct 180  Q
    |||||||| | | ||||| |||||| ||  || ||||||||| |||||||||||||| |||||| ||| |||||  |||  ||| ||||| ||| |||||    
T  25175 gatctctctacttcactatcaatgagttctttacaaagagatacaaaaaggttacaagaaattaccttcaacaaactctcaaagaacaaaactagtttct 25076  T
Q  181 accatttt 188  Q
    ||||||||    
T  25075 accatttt 25068  T

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Target: scaffold0491 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 8759 - 8845
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||| || ||  |   |||||||| ||||| |||||||| ||||||    
T  8759 tgacctactctggaggagagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaatta 8845  T

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Target: scaffold0491; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 11185 - 11271
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccactaccaatgaatttgtttcaaagagatgcaaaaaggttacaataaatta 144  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||| || ||  |   |||||||| ||||| |||||||| ||||||    
T  11185 tgacctactctggaggagagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaatta 11271  T

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Target: scaffold0674 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 3750 - 3790
Alignment:
Q  58 tgacctactctgtgggagagattgatctctccaatccacta 98  Q
    ||||||||||||  ||||||||||| |||||||||||||||    
T  3750 tgacctactctggaggagagattgaactctccaatccacta 3790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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