View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21619_low_3 (Length: 429)
Name: NF21619_low_3
Description: NF21619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21619_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 377; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 15 - 411
Target Start/End: Original strand, 43485806 - 43486202
Alignment:
| Q |
15 |
agatgaaggaatataaagaaacactgaattagagaccaagatccaaagattttttaaggttcacacaaagatcagagcttgctttcaaatatgagatcat |
114 |
Q |
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| T |
43485806 |
agatgaagaaatataaagaaacactgaattagagaccaagatccaaagattttttaaggttcacacaaagatcagagcttgctttcaaatatgagatcat |
43485905 |
T |
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| Q |
115 |
aaaatatgttacaataaaaacgctcaatttgaatgtcaatagtagaagaaactgatggagtattgttgtcgcgagatgtgtcttcacaccggctttaaca |
214 |
Q |
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| T |
43485906 |
aaaatatgttacaataaaaacgctcaatttgaatgtcaatagtagaagaaactgatggagtattgttgtcgcgagatgtgtcttcacaccggctttaaca |
43486005 |
T |
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| Q |
215 |
caattttcgttgattacttctatcgtggaaccatcctccaaatgatttggaaaataagtatctacaactcaaatgttttcatagttttaatgaattccat |
314 |
Q |
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| T |
43486006 |
caattttcgttgattgcttctatcgtggaaccatcgtccaaatgatttggaaaataagtatctacaactcaaatgttttcatagttttaatgaattccat |
43486105 |
T |
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| Q |
315 |
tgattgctatacactagcaattatagggtttacctttttcttgaatttgaaccaaattctgacatggtcgaacttcgagagaacaacctctccttcc |
411 |
Q |
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||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43486106 |
tgattgcgatacactagcaattatagggttcacctttttcttgaatttgaaccaaattctgacatggtcgaacttcgagagaacaacctctccttcc |
43486202 |
T |
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