View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21620_high_13 (Length: 386)
Name: NF21620_high_13
Description: NF21620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21620_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 32227331 - 32227689
Alignment:
| Q |
1 |
ctcaagaattggatcagttgaaacatttggctctgttgagaatctgtcacttgatgacttctattgaggtcatttctacatatgaagggcactaacatgg |
100 |
Q |
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| T |
32227331 |
ctcaagaattggatcagttgaaacatttggctctgttgagaatctgtcacttgatgacttctattgaggtcatttctacatatgaagggcactaacatgg |
32227430 |
T |
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| Q |
101 |
ttactaggaaggtgggttcctccattttggtactgagaaagatgaaagtgtgnnnnnnngttctttttgtggttgtcatgacaatgggaggaattgtgta |
200 |
Q |
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| T |
32227431 |
ttactaggaaggtgggttcctccattttggtactaagaaagatgaaagtgtgtttttttgttctttttgtggttgtcatgacaatgggaggaattgtgta |
32227530 |
T |
|
| Q |
201 |
gaataaaagagtagtcagtggacatgtttttgtgttcctctctcttgaactaaggttgggactgctctacgatgtattgtttataatttttggtggataa |
300 |
Q |
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| T |
32227531 |
gaataaaagagtagtcagtggacatgtttttgtgttcctctctcttgaac-aaggttgggactgctctacgatgtattgtttataatttttggtggataa |
32227629 |
T |
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| Q |
301 |
catctacataaattatcttgaatgtttcagtatagatcgtttgatgttaaagttcatttc |
360 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
32227630 |
catctacataaattatcttgaatgttccagtatagatcgtttgatgttaaagttcatttc |
32227689 |
T |
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