View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21620_high_18 (Length: 320)

Name: NF21620_high_18
Description: NF21620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21620_high_18
NF21620_high_18
[»] chr8 (13 HSPs)
chr8 (19-218)||(12189334-12189534)
chr8 (19-218)||(12433762-12433962)
chr8 (253-314)||(12178858-12178919)
chr8 (253-314)||(12423286-12423347)
chr8 (86-218)||(20681103-20681235)
chr8 (253-314)||(12190553-12190614)
chr8 (253-314)||(12434981-12435042)
chr8 (55-112)||(7995186-7995243)
chr8 (55-110)||(28161967-28162022)
chr8 (258-314)||(5568635-5568691)
chr8 (258-314)||(13164332-13164388)
chr8 (55-111)||(25732349-25732405)
chr8 (62-106)||(39533709-39533753)
[»] chr7 (10 HSPs)
chr7 (56-218)||(16332850-16333012)
chr7 (54-110)||(5086595-5086651)
chr7 (55-119)||(19017029-19017093)
chr7 (55-125)||(664985-665055)
chr7 (57-99)||(5609531-5609573)
chr7 (55-112)||(21588159-21588216)
chr7 (56-110)||(13783873-13783927)
chr7 (57-99)||(21824380-21824422)
chr7 (56-116)||(7097424-7097484)
chr7 (56-112)||(29526830-29526886)
[»] chr6 (7 HSPs)
chr6 (56-218)||(30148022-30148184)
chr6 (55-99)||(21698711-21698755)
chr6 (55-99)||(30063687-30063731)
chr6 (55-110)||(1638279-1638334)
chr6 (55-93)||(11986216-11986254)
chr6 (55-99)||(7090442-7090486)
chr6 (56-112)||(15950802-15950858)
[»] chr1 (11 HSPs)
chr1 (57-110)||(38532716-38532769)
chr1 (171-218)||(3461359-3461406)
chr1 (55-110)||(25594836-25594891)
chr1 (57-99)||(22161754-22161796)
chr1 (55-99)||(4179972-4180016)
chr1 (55-111)||(21182639-21182695)
chr1 (55-111)||(29601009-29601065)
chr1 (56-93)||(11420388-11420425)
chr1 (55-92)||(11644750-11644787)
chr1 (56-112)||(26418796-26418852)
chr1 (56-112)||(32108428-32108484)
[»] chr4 (6 HSPs)
chr4 (57-111)||(17459403-17459457)
chr4 (57-110)||(15065908-15065961)
chr4 (56-116)||(13200842-13200902)
chr4 (55-111)||(25553250-25553306)
chr4 (56-125)||(4946688-4946757)
chr4 (56-112)||(47782993-47783049)
[»] chr3 (10 HSPs)
chr3 (55-116)||(34935090-34935151)
chr3 (55-111)||(8968396-8968452)
chr3 (55-111)||(9734460-9734516)
chr3 (55-110)||(2651818-2651873)
chr3 (51-110)||(15790040-15790099)
chr3 (55-99)||(2439491-2439535)
chr3 (55-112)||(29704651-29704708)
chr3 (57-109)||(14504131-14504183)
chr3 (55-111)||(26307376-26307432)
chr3 (56-112)||(32073615-32073671)
[»] chr5 (5 HSPs)
chr5 (51-110)||(8724707-8724766)
chr5 (56-110)||(13065481-13065535)
chr5 (55-99)||(11619193-11619237)
chr5 (55-99)||(19609177-19609221)
chr5 (55-111)||(20706117-20706173)
[»] scaffold0007 (1 HSPs)
scaffold0007 (57-110)||(234724-234777)
[»] scaffold1689 (1 HSPs)
scaffold1689 (55-99)||(914-958)
[»] scaffold0114 (1 HSPs)
scaffold0114 (55-99)||(11554-11598)
[»] scaffold0071 (1 HSPs)
scaffold0071 (56-116)||(52678-52738)
[»] chr2 (2 HSPs)
chr2 (55-111)||(21085007-21085063)
chr2 (55-99)||(31426450-31426494)
[»] scaffold0388 (1 HSPs)
scaffold0388 (55-110)||(14465-14520)
[»] scaffold0251 (1 HSPs)
scaffold0251 (56-99)||(2258-2301)
[»] scaffold0445 (1 HSPs)
scaffold0445 (57-93)||(14051-14087)


Alignment Details
Target: chr8 (Bit Score: 153; Significance: 4e-81; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 12189334 - 12189534
Alignment:
Q  19 cttgtctagatcaaggagggaagttattggtc-tcacatttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagttaa 117  Q
    ||||||||||||  | |||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  12189334 cttgtctagatcgggaagggaaattattggtcctcacatttaacaatctctcgtgtggagtttattatgaggcaagcgaatgtagttgcacatgagttag 12189433  T
Q  118 ctcagacatctacttcttcacctagcttccatatttataatgatgtaaggttttgtataaacgatttgattgctaatgaactgctgtaagcatatttttc 217  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12189434 ctgagacagctacttcttcacctagcttccatatttataatgatgtaaggttttgtataaacgatttgattgctaatgaactgctgtaagcgtatttttc 12189533  T
Q  218 t 218  Q
    |    
T  12189534 t 12189534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 12433762 - 12433962
Alignment:
Q  19 cttgtctagatcaaggagggaagttattggtc-tcacatttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagttaa 117  Q
    ||||||||||||  | |||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  12433762 cttgtctagatcgggaagggaaattattggtcctcacatttaacaatctctcgtgtggagtttattatgaggcaagcgaatgtagttgcacatgagttag 12433861  T
Q  118 ctcagacatctacttcttcacctagcttccatatttataatgatgtaaggttttgtataaacgatttgattgctaatgaactgctgtaagcatatttttc 217  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12433862 ctgagacagctacttcttcacctagcttccatatttataatgatgtaaggttttgtataaacgatttgattgctaatgaactgctgtaagcgtatttttc 12433961  T
Q  218 t 218  Q
    |    
T  12433962 t 12433962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 12178858 - 12178919
Alignment:
Q  253 ctttaattgctttttcaagttcttcccaaacctcttctcctttttcgatcctatagtctatg 314  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  12178858 ctttaattgctttttctagttcttcccaaacctcttctcctttttcgattctatagtctatg 12178919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 12423286 - 12423347
Alignment:
Q  253 ctttaattgctttttcaagttcttcccaaacctcttctcctttttcgatcctatagtctatg 314  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  12423286 ctttaattgctttttctagttcttcccaaacctcttctcctttttcgattctatagtctatg 12423347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 20681103 - 20681235
Alignment:
Q  86 gaggcaagcgaatgtagttgcacatgagttaactcagacatctacttcttcacctagcttccatatttataatgatgtaaggttttgtataaacgatttg 185  Q
    |||||||||||| |||||||| ||| | ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    ||||||||| ||||||     
T  20681103 gaggcaagcgaacgtagttgcccataaattagctcagacagttacttcctcacatagcttccgtatttataatgatgtaccactttgtataatcgattta 20681202  T
Q  186 attgctaatgaactgctgtaagcatatttttct 218  Q
    |||| ||||||| |||| ||||| |||||||||    
T  20681203 attgttaatgaaatgctataagcttatttttct 20681235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 12190553 - 12190614
Alignment:
Q  253 ctttaattgctttttcaagttcttcccaaacctcttctcctttttcgatcctatagtctatg 314  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  12190553 ctttaattgctctttctagttcttcccaaacctcttctcctttttcgattctatagtctatg 12190614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 12434981 - 12435042
Alignment:
Q  253 ctttaattgctttttcaagttcttcccaaacctcttctcctttttcgatcctatagtctatg 314  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  12434981 ctttaattgctctttctagttcttcccaaacctcttctcctttttcgattctatagtctatg 12435042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 7995186 - 7995243
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatga 112  Q
    ||||||||||||||| ||||||||||||||||| |||| | |||| ||||||||||||    
T  7995186 atttaacaaactctcatgtcgagtttattatgaagcaaacaaatgaagttgcacatga 7995243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 28162022 - 28161967
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||  |||||||||    
T  28162022 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatgaggttgcacat 28161967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 5568691 - 5568635
Alignment:
Q  258 attgctttttcaagttcttcccaaacctcttctcctttttcgatcctatagtctatg 314  Q
    |||||||| |||||||||  |||||| || |||||||| ||||||||||||||||||    
T  5568691 attgctttctcaagttctggccaaacttcatctcctttctcgatcctatagtctatg 5568635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 13164388 - 13164332
Alignment:
Q  258 attgctttttcaagttcttcccaaacctcttctcctttttcgatcctatagtctatg 314  Q
    |||||||| | ||||||| ||||||| || ||||||||||||||||| |||||||||    
T  13164388 attgctttctgaagttctccccaaacttcatctcctttttcgatcctgtagtctatg 13164332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 25732405 - 25732349
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatg 111  Q
    ||||||||||||||| |||||||||||||| |||| |||| ||||  ||||||||||    
T  25732405 atttaacaaactctcatgtcgagtttattaggaggtaagcaaatgaggttgcacatg 25732349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 39533709 - 39533753
Alignment:
Q  62 aaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgc 106  Q
    |||||||| ||| |||||||||| ||||||||||||||| |||||    
T  39533709 aaactctcatgttgagtttattaggaggcaagcgaatgtggttgc 39533753  T

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Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 56 - 218
Target Start/End: Original strand, 16332850 - 16333012
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagttaactcagacatctacttcttcacctagcttccatatttat 155  Q
    ||||| ||||||||| ||||||||||||| |||||||||||| | |||||| ||||||||| ||||| || ||||||| ||||||||||||| |||||||    
T  16332850 tttaataaactctcgagtcgagtttattaggaggcaagcgaacgcagttgcccatgagttagctcaggcagctacttcctcacctagcttccgtatttat 16332949  T
Q  156 aatgatgtaaggttttgtataaacgatttgattgctaatgaactgctgtaagcatatttttct 218  Q
    || ||||||    ||||||||||||||||||||||||||||| |||| |||||||| ||||||    
T  16332950 aaagatgtaccactttgtataaacgatttgattgctaatgaaatgctataagcatacttttct 16333012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 5086595 - 5086651
Alignment:
Q  54 catttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||    
T  5086595 catttaacaaactctcatgtcgagtttattaggaggcaagcgaatgaggttgcacat 5086651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 19017093 - 19017029
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagttaact 119  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||| ||||| ||||| ||||||    
T  19017093 atttaacaaactctcgtgttgagtttattaggaggcaagcaaatgtggttgcccatgaattaact 19017029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 665055 - 664985
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagttaactcagaca 125  Q
    ||||||||||||||| |||||||||||||| ||| ||||| ||||  ||||||||||| ||| || |||||    
T  665055 atttaacaaactctcatgtcgagtttattaggagacaagcaaatgaggttgcacatgaattagctaagaca 664985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 5609573 - 5609531
Alignment:
Q  57 ttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  5609573 ttaacaaactctcatgtcgagtttattaggaggcaagcgaatg 5609531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 21588216 - 21588159
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatga 112  Q
    ||||||||||||||| |||||||||||||| ||||||| | ||||  |||||||||||    
T  21588216 atttaacaaactctcatgtcgagtttattaggaggcaatcaaatgaggttgcacatga 21588159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 13783873 - 13783927
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    ||||||||| |||| ||||||||||| || ||||||||||||||  |||||||||    
T  13783873 tttaacaaaatctcatgtcgagtttactaggaggcaagcgaatgaggttgcacat 13783927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 21824380 - 21824422
Alignment:
Q  57 ttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  21824380 ttaacaaactctcatgtcgagtttattaggaggcaagcaaatg 21824422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 7097484 - 7097424
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagtta 116  Q
    ||||| |||||||  |||||||||||||| ||||||||| ||||  ||||| |||||||||    
T  7097484 tttaataaactcttatgtcgagtttattaagaggcaagcaaatgaggttgctcatgagtta 7097424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 29526830 - 29526886
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatga 112  Q
    |||||||||||||| ||||||||||| || ||||||||| ||||  ||||| |||||    
T  29526830 tttaacaaactctcatgtcgagtttactaggaggcaagcaaatgaggttgctcatga 29526886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 6e-37; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 218
Target Start/End: Original strand, 30148022 - 30148184
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagttaactcagacatctacttcttcacctagcttccatatttat 155  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||||   ||||| || ||||| || ||||||| ||| ||||||||| |||||||    
T  30148022 tttaacaaactctcatgtcgagtttattaggaggcaagcgaacgtagttgactatgaggtagctcaggcagctacttcctcatctagcttccgtatttat 30148121  T
Q  156 aatgatgtaaggttttgtataaacgatttgattgctaatgaactgctgtaagcatatttttct 218  Q
    |||||||||  | ||||||||||||| ||||||||||||||| |||| ||||| || ||||||    
T  30148122 aatgatgtaccgctttgtataaacgagttgattgctaatgaaatgctataagcttaattttct 30148184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 21698711 - 21698755
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||    
T  21698711 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatg 21698755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 30063731 - 30063687
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||    
T  30063731 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatg 30063687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 1638334 - 1638279
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    ||||||||||||||| |||||| ||||||| ||||||||| ||||  |||||||||    
T  1638334 atttaacaaactctcatgtcgaatttattaggaggcaagcaaatgaggttgcacat 1638279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 11986216 - 11986254
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaag 93  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  11986216 atttaacaaactctcatgtcgagtttattaggaggcaag 11986254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 7090486 - 7090442
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||||| ||| |||||||||| ||||||||| ||||    
T  7090486 atttaacaaactctcatgttgagtttattaggaggcaagcaaatg 7090442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 15950802 - 15950858
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatga 112  Q
    |||||||||||||| ||||||||||| || ||||||||| ||||  ||||| |||||    
T  15950802 tttaacaaactctcatgtcgagtttactaggaggcaagcaaatgaggttgctcatga 15950858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 38532769 - 38532716
Alignment:
Q  57 ttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    ||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  38532769 ttaacaaactctcatgtcgagtttattatgaggcaagcgaatgaggttgcacat 38532716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 3461359 - 3461406
Alignment:
Q  171 tgtataaacgatttgattgctaatgaactgctgtaagcatatttttct 218  Q
    ||||||||||||||||||||||||||| || | |||||||||||||||    
T  3461359 tgtataaacgatttgattgctaatgaaatgttataagcatatttttct 3461406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 25594891 - 25594836
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||  |||||||||    
T  25594891 atttaacaaactctcatgtcgagtttattaggaggcaggcgaatgaggttgcacat 25594836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 22161754 - 22161796
Alignment:
Q  57 ttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  22161754 ttaacaaactctcatgtcgagtttattaggaggcaagcgaatg 22161796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 4179972 - 4180016
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||    
T  4179972 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatg 4180016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 21182639 - 21182695
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatg 111  Q
    ||||||||||||||| |||||||||||||| ||||||| | ||||  ||||||||||    
T  21182639 atttaacaaactctcatgtcgagtttattaggaggcaaacaaatgaggttgcacatg 21182695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 29601009 - 29601065
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatg 111  Q
    ||||| ||||||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  29601009 atttatcaaactctcatgtcgagtttattaggaggcaagcaaatgaggttgcacatg 29601065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 11420425 - 11420388
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaag 93  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  11420425 tttaacaaactctcatgtcgagtttattaggaggcaag 11420388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 11644750 - 11644787
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaa 92  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  11644750 atttaacaaactctcatgtcgagtttattaggaggcaa 11644787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 26418852 - 26418796
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatga 112  Q
    |||||||||||||| ||||||||||| || ||||||||| ||||  ||||| |||||    
T  26418852 tttaacaaactctcatgtcgagtttactaggaggcaagcaaatgaggttgctcatga 26418796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 32108428 - 32108484
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatga 112  Q
    |||||||||||||| ||||||||||| || ||||||||| ||||  ||||| |||||    
T  32108428 tttaacaaactctcatgtcgagtttactaggaggcaagcaaatgaggttgctcatga 32108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 17459403 - 17459457
Alignment:
Q  57 ttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatg 111  Q
    ||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||    
T  17459403 ttaacaaactctcatgtcgagtttattaggaggcaagcgaatgaggttgcacatg 17459457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 15065908 - 15065961
Alignment:
Q  57 ttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    ||||||||||||| |||||||||||||| ||||||||||||||  |||||||||    
T  15065908 ttaacaaactctcatgtcgagtttattaggaggcaagcgaatgaggttgcacat 15065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 13200842 - 13200902
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagtta 116  Q
    |||||||||||||| ||||||||| |||| ||||||||| ||||  ||||| |||||||||    
T  13200842 tttaacaaactctcatgtcgagttcattaggaggcaagcaaatgaggttgctcatgagtta 13200902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 25553250 - 25553306
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatg 111  Q
    ||||||||||||||| ||| |||||||||| ||||||||| ||||  ||||||||||    
T  25553250 atttaacaaactctcatgttgagtttattaggaggcaagcaaatgaggttgcacatg 25553306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 4946757 - 4946688
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagttaactcagaca 125  Q
    ||||||||| |||| | |||||||||||| ||||||||| ||||  ||||| ||||||||| || |||||    
T  4946757 tttaacaaattctcatatcgagtttattaggaggcaagcaaatgaggttgctcatgagttagctaagaca 4946688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 47782993 - 47783049
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatga 112  Q
    |||||||||||||| ||||||||||| || ||||||||| ||||  ||||| |||||    
T  47782993 tttaacaaactctcatgtcgagtttactaggaggcaagcaaatgaggttgctcatga 47783049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 34935090 - 34935151
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagtta 116  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||  ||||||||| |||||    
T  34935090 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatgaggttgcacataagtta 34935151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 8968452 - 8968396
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatg 111  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  8968452 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatgaggttgcacatg 8968396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 9734516 - 9734460
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatg 111  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  9734516 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatgaggttgcacatg 9734460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 2651873 - 2651818
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||  |||||||||    
T  2651873 atttaacaaactctcatgtcgagtttattaggaggcaaacgaatgaggttgcacat 2651818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 15790040 - 15790099
Alignment:
Q  51 tcacatttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    |||| |||||||||||||| ||||||||||| || ||||||||||||||  |||||||||    
T  15790040 tcacttttaacaaactctcatgtcgagtttactaggaggcaagcgaatgaggttgcacat 15790099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 2439491 - 2439535
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||    
T  2439491 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatg 2439535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 29704651 - 29704708
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatga 112  Q
    |||||| |||||||| ||| || ||||||| ||||||||||||||| ||||| |||||    
T  29704651 atttaaaaaactctcatgttgaatttattaggaggcaagcgaatgtggttgcccatga 29704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 14504183 - 14504131
Alignment:
Q  57 ttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcaca 109  Q
    |||| ||| |||| |||||||||||||| ||||||||||||||  ||||||||    
T  14504183 ttaaaaaattctcatgtcgagtttattaggaggcaagcgaatgaggttgcaca 14504131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 26307376 - 26307432
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatg 111  Q
    |||||| |||||||| |||||||||||||| ||||||||  ||||  ||||||||||    
T  26307376 atttaataaactctcctgtcgagtttattaggaggcaagtaaatgaggttgcacatg 26307432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 32073671 - 32073615
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatga 112  Q
    |||||||||||||| ||||||||||| || ||||||||| ||||  ||||| |||||    
T  32073671 tttaacaaactctcatgtcgagtttactaggaggcaagcaaatgaggttgctcatga 32073615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 8724707 - 8724766
Alignment:
Q  51 tcacatttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    |||| |||||||||||||| ||||||||||| || ||||||||||||||  |||||||||    
T  8724707 tcacttttaacaaactctcatgtcgagtttactaggaggcaagcgaatgaggttgcacat 8724766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 13065535 - 13065481
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    |||||||||||||| ||||||||||| || ||||||||||||||  |||||||||    
T  13065535 tttaacaaactctcatgtcgagtttactaggaggcaagcgaatgaggttgcacat 13065481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 11619237 - 11619193
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||    
T  11619237 atttaacaaactctcatgtcgagtttattaggaggcaaacgaatg 11619193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 19609221 - 19609177
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||    
T  19609221 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatg 19609177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 20706117 - 20706173
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatg 111  Q
    ||||| ||||||||| ||||||||||||||  |||||||| ||||  ||||||||||    
T  20706117 atttatcaaactctcatgtcgagtttattagaaggcaagcaaatgaggttgcacatg 20706173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 234777 - 234724
Alignment:
Q  57 ttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||  |||||||||    
T  234777 ttaacaaactctcatgtcgagtttattaggaggcaaacgaatgaggttgcacat 234724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1689 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1689
Description:

Target: scaffold1689; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 914 - 958
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||    
T  914 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatg 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 11598 - 11554
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||    
T  11598 atttaacaaactctcatgtcgagtttattaggaggcaagcaaatg 11554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 52678 - 52738
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatgagtta 116  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||  ||||  |||||||||    
T  52678 tttaacaaactctcatgtcgagtttattaggaggcaagcaaatgacgttgttcatgagtta 52738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 21085063 - 21085007
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacatg 111  Q
    ||||| ||||||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  21085063 atttatcaaactctcatgtcgagtttattaggaggcaagcaaatgaggttgcacatg 21085007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 31426450 - 31426494
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||    
T  31426450 atttaacaaactctcatgtcgagtttattaagaggcaagcaaatg 31426494  T

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Target: scaffold0388 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 14520 - 14465
Alignment:
Q  55 atttaacaaactctcgtgtcgagtttattatgaggcaagcgaatgtagttgcacat 110  Q
    ||||||||||||||| |||||| ||||||| ||||||||| ||||  |||||||||    
T  14520 atttaacaaactctcatgtcgaatttattaggaggcaagcaaatgaggttgcacat 14465  T

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Target: scaffold0251 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 2301 - 2258
Alignment:
Q  56 tttaacaaactctcgtgtcgagtttattatgaggcaagcgaatg 99  Q
    |||||||||||||| ||||||||||| || ||||||||||||||    
T  2301 tttaacaaactctcatgtcgagtttactaggaggcaagcgaatg 2258  T

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Target: scaffold0445 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 14087 - 14051
Alignment:
Q  57 ttaacaaactctcgtgtcgagtttattatgaggcaag 93  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  14087 ttaacaaactctcatgtcgagtttattaggaggcaag 14051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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